F302012
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 196 | 179 | 392 | 331 |
Family's Representative Sequence
| Representative Sequence | 3300046523|Ga0495644_0005734|Ga0495644_0005734_2645_3811 |
| Length | 376 |
| Sequence | LVDKAAQRLEHAGDSLARPRPVRAPETNQSLEKCMSAAPDDQSLAVPGARGSKVGAGERHDWRLAEVEALFDLPFMDLMFRAQQVHRAFHAPNRVQMSTLLSIKTGGCPEDCGYCPQSIHFETGVAREEMLPLEAVVDAARKAQAAGATRFCMGAAFRSPKKKDIERIAGMIREVGALGLETCATLGMLTPEQAQELKGAGLDYYNHNVDSSEDYYRKIISTRTYQHRLDTLEAVRNANLKVCSGGIVGMGETRTDRAGMLVTLANLPQHPQSVPINQLVQVKGTPLANADGFEFVRTIAVARILMPEAQVRLSAGREEMSDELQALAFMAGANSIFYGEKLLTTGNPDVERDRSLLARLKVNAETQQQTDARGCC |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 4 | 3300003856 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz | Metagenome | Rhizosphere |
| 5 | 3300005272 | Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 | Metagenome | Rhizosphere |
| 6 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 12 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 14 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 15 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 16 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 17 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 18 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 19 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 20 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 21 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 22 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 42 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 43 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 44 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 62 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 63 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 64 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 65 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 66 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 67 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 68 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 69 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 70 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 71 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 72 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 73 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 74 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 75 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 76 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 77 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 78 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 79 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 80 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 81 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 82 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 83 | 3300042003 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 | Metagenome | Rhizosphere |
| 84 | 3300042121 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 | Metagenome | Rhizosphere |
| 85 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 86 | 3300042436 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 | Metagenome | Rhizosphere |
| 87 | 3300042437 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 | Metagenome | Rhizosphere |
| 88 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 89 | 3300042461 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 | Metagenome | Rhizosphere |
| 90 | 3300042531 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 | Metagenome | Rhizosphere |
| 91 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300048090 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 115 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 116 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 117 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 118 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 119 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300049513 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control | Metagenome | Rhizosphere |
| 121 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 129 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 131 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 138 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 139 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 140 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300053079 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere | Metagenome | Endosphere |
| 142 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 144 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 145 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 146 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 147 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 148 | 2508501050 | Microvirga lupini Lut6 | Isolate | Nodule |
| 149 | 2508501114 | Microvirga lotononidis WSM3557 | Isolate | Nodule |
| 150 | 2551306352 | Acinetobacter sp. GG2 | Isolate | Rhizosphere |
| 151 | 2554235132 | Pseudomonas aeruginosa PGPR2 | Isolate | Unclassified |
| 152 | 2582581306 | Rhizobium sp. YR295 | Isolate | Rhizosphere |
| 153 | 2600254954 | Pseudomonas sp. NFACC19-2 | Isolate | Rhizoplane |
| 154 | 2600255389 | Pseudomonas sp. NFPP33 | Isolate | Rhizoplane |
| 155 | 2639762793 | Acinetobacter calcoaceticus GK1 | Isolate | Rhizosphere |
| 156 | 2643221607 | Rhizobium sp. Root73 | Isolate | Unclassified |
| 157 | 2643221636 | Rhizobium sp. Root1204 | Isolate | Unclassified |
| 158 | 2643221665 | Acinetobacter sp. Root1280 | Isolate | Unclassified |
| 159 | 2643221686 | Rhizobium sp. Root1334 | Isolate | Unclassified |
| 160 | 2675903507 | Acinetobacter calcoaceticus GK2 | Isolate | Unclassified |
| 161 | 2744054655 | Acinetobacter sp. BMW17 | Isolate | Unclassified |
| 162 | 2773857761 | Acinetobacter sp. 3664 | Isolate | Unclassified |
| 163 | 2773857770 | Acinetobacter sp. 3636 | Isolate | Unclassified |
| 164 | 2773857925 | Microvirga vignae BR3299 | Isolate | Unclassified |
| 165 | 2823421272 | Pseudomonas mendocina S5.2 | Isolate | Rhizoplane |
| 166 | 2844533157 | Inquilinus sp. R-72501 v. 2 | Isolate | Unclassified |
| 167 | 2882456835 | Microvirga sp. KLBC 81 | Isolate | Unclassified |
| 168 | 2916699645 | Acinetobacter ursingii M3 | Isolate | Unclassified |
| 169 | 2917699015 | Bosea sp. F3-2 | Isolate | Rhizosphere |
| 170 | 2919182534 | Acinetobacter calcoaceticus 2589 | Isolate | Rhizosphere |
| 171 | 2919501602 | Pseudomonas alcaliphila 3512 | Isolate | Unclassified |
| 172 | 2919506607 | Acinetobacter sp. 3657 | Isolate | Unclassified |
| 173 | 2926063275 | Pseudomonas sp. 3400 | Isolate | Unclassified |
| 174 | 2928515477 | Acinetobacter bereziniae 1375 | Isolate | Rhizosphere |
| 175 | 2984568884 | Acinetobacter baylyi SORGH_AS893 | Isolate | Aerial Root |
| 176 | 637000220 | Pseudomonas protegens Pf-5 | Isolate | Rhizoplane |
| 177 | 8018150411 | Rhizobium straminoryzae SM12 | Isolate | Rhizosphere |
| 178 | 8033232454 | Acinetobacter radioresistens SA188 | Isolate | Unclassified |
| 179 | 8034962539 | Pseudomonas sediminis PI11 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 83.16 |
| Metatranscriptomes | 0 |
| Isolates | 16.84 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.51 |
| Bulb | 0 |
| Endosphere | 11.73 |
| Nodule | 1.02 |
| Rhizoplane | 4.59 |
| Rhizosphere | 70.41 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495644_0005734 | 3300046523 | Bacteria | 4848 |
| 2 | JGI25151J46595_10000064 | 3300003187 | Bacteria | 145243 |
| 3 | JGI25151J46595_10005685 | 3300003187 | Bacteria | 6405 |
| 4 | JGI25160J50197_1005560 | 3300003354 | Bacteria | 5228 |
| 5 | Ga0058692_1000003 | 3300003856 | Bacteria | 435295 |
| 6 | Ga0065703_1000213 | 3300005272 | Bacteria | 9262 |
| 7 | Ga0070676_10190495 | 3300005328 | Bacteria | 1339 |
| 8 | Ga0070675_100037736 | 3300005354 | Bacteria | 3937 |
| 9 | Ga0070675_100077036 | 3300005354 | Bacteria | 2775 |
| 10 | Ga0070674_100241684 | 3300005356 | Bacteria | 1414 |
| 11 | Ga0070667_100352971 | 3300005367 | Bacteria | 1332 |
| 12 | Ga0070681_10151508 | 3300005458 | Bacteria | 2245 |
| 13 | Ga0068867_100253215 | 3300005459 | Bacteria | 1433 |
| 14 | Ga0070665_100098788 | 3300005548 | Bacteria | 2924 |
| 15 | Ga0068859_100000890 | 3300005617 | Bacteria | 30435 |
| 16 | Ga0068859_100048987 | 3300005617 | Bacteria | 4244 |
| 17 | Ga0068861_100000016 | 3300005719 | Bacteria | 79478 |
| 18 | Ga0075365_10003161 | 3300006038 | Bacteria | 8405 |
| 19 | Ga0075368_10052653 | 3300006042 | Bacteria | 1620 |
| 20 | Ga0075363_100166593 | 3300006048 | Bacteria | 1249 |
| 21 | Ga0075364_10000982 | 3300006051 | Bacteria | 15077 |
| 22 | Ga0075364_10014773 | 3300006051 | Bacteria | 4829 |
| 23 | Ga0075362_10039352 | 3300006177 | Bacteria | 2078 |
| 24 | Ga0075370_10004101 | 3300006353 | Bacteria | 7018 |
| 25 | Ga0068871_100058909 | 3300006358 | Bacteria | 3128 |
| 26 | Ga0097620_100000890 | 3300006931 | Bacteria | 30435 |
| 27 | Ga0097620_100048985 | 3300006931 | Bacteria | 4244 |
| 28 | Ga0105251_10000019 | 3300009011 | Bacteria | 141884 |
| 29 | Ga0105244_10048410 | 3300009036 | Bacteria | 2176 |
| 30 | Ga0105250_10000188 | 3300009092 | Bacteria | 53425 |
| 31 | Ga0105240_10110475 | 3300009093 | Bacteria | 3328 |
| 32 | Ga0105245_10121390 | 3300009098 | Bacteria | 2442 |
| 33 | Ga0105247_10000595 | 3300009101 | Bacteria | 29350 |
| 34 | Ga0105247_10019553 | 3300009101 | Bacteria | 4067 |
| 35 | Ga0105243_10000005 | 3300009148 | Bacteria | 576265 |
| 36 | Ga0105248_10065768 | 3300009177 | Bacteria | 4071 |
| 37 | Ga0105249_10003638 | 3300009553 | Bacteria | 13329 |
| 38 | Ga0157373_10026638 | 3300013100 | Bacteria | 4173 |
| 39 | Ga0157371_10001928 | 3300013102 | Bacteria | 20705 |
| 40 | Ga0157378_10030730 | 3300013297 | Bacteria | 4743 |
| 41 | Ga0157378_10146458 | 3300013297 | Bacteria | 2197 |
| 42 | Ga0157375_10179470 | 3300013308 | Bacteria | 2268 |
| 43 | Ga0163163_10218084 | 3300014325 | Bacteria | 1956 |
| 44 | Ga0157380_10092665 | 3300014326 | Bacteria | 2497 |
| 45 | Ga0157379_10025734 | 3300014968 | Bacteria | 5231 |
| 46 | Ga0157376_10002897 | 3300014969 | Bacteria | 11763 |
| 47 | Ga0163161_10112552 | 3300017792 | Bacteria | 2036 |
| 48 | Ga0213872_10002180 | 3300021361 | Bacteria | 11736 |
| 49 | Ga0209130_1000868 | 3300025284 | Bacteria | 24786 |
| 50 | Ga0209025_1000182 | 3300025294 | Bacteria | 156443 |
| 51 | Ga0209758_1003776 | 3300025297 | Bacteria | 13365 |
| 52 | Ga0207426_1000102 | 3300025302 | Bacteria | 255303 |
| 53 | Ga0207696_1000094 | 3300025711 | Bacteria | 184065 |
| 54 | Ga0207655_1001537 | 3300025728 | Bacteria | 20860 |
| 55 | Ga0207655_1009733 | 3300025728 | Bacteria | 5928 |
| 56 | Ga0207713_1000010 | 3300025735 | Bacteria | 528374 |
| 57 | Ga0207710_10001221 | 3300025900 | Bacteria | 13027 |
| 58 | Ga0207659_10094023 | 3300025926 | Bacteria | 2245 |
| 59 | Ga0207709_10000001 | 3300025935 | Bacteria | 2228154 |
| 60 | Ga0207669_10086865 | 3300025937 | Bacteria | 2024 |
| 61 | Ga0207711_10009809 | 3300025941 | Bacteria | 7964 |
| 62 | Ga0207711_10037183 | 3300025941 | Bacteria | 4133 |
| 63 | Ga0207689_10001586 | 3300025942 | Bacteria | 21539 |
| 64 | Ga0207667_10111704 | 3300025949 | Bacteria | 2819 |
| 65 | Ga0207712_10005339 | 3300025961 | Bacteria | 8114 |
| 66 | Ga0207658_10345329 | 3300025986 | Bacteria | 1295 |
| 67 | Ga0207648_10061962 | 3300026089 | Bacteria | 3261 |
| 68 | Ga0207675_100000015 | 3300026118 | Bacteria | 126545 |
| 69 | Ga0207675_100175749 | 3300026118 | Bacteria | 2049 |
| 70 | Ga0209371_1000006 | 3300027312 | Bacteria | 1055642 |
| 71 | Ga0265337_1000905 | 3300028556 | Bacteria | 15601 |
| 72 | Ga0265334_10002100 | 3300028573 | Bacteria | 9411 |
| 73 | Ga0307515_10033882 | 3300028794 | Bacteria | 8390 |
| 74 | Ga0268256_1000007 | 3300030500 | Bacteria | 1055326 |
| 75 | Ga0265332_10075993 | 3300031238 | Bacteria | 1428 |
| 76 | Ga0265340_10035464 | 3300031247 | Bacteria | 2477 |
| 77 | Ga0265331_10021328 | 3300031250 | Bacteria | 3317 |
| 78 | Ga0265327_10000580 | 3300031251 | Bacteria | 61843 |
| 79 | Ga0307408_100000065 | 3300031548 | Bacteria | 122365 |
| 80 | Ga0307514_10151727 | 3300031649 | Bacteria | 1553 |
| 81 | Ga0265314_10139159 | 3300031711 | Bacteria | 1503 |
| 82 | Ga0316576_10008030 | 3300031727 | Bacteria | 6692 |
| 83 | Ga0316576_10027081 | 3300031727 | Bacteria | 4027 |
| 84 | Ga0316578_10116461 | 3300031728 | Bacteria | 1606 |
| 85 | Ga0307409_100042505 | 3300031995 | Bacteria | 3405 |
| 86 | Ga0316584_0040587 | 3300036712 | Bacteria | 3468 |
| 87 | Ga0316584_0114528 | 3300036712 | Bacteria | 2017 |
| 88 | Ga0395900_0333949 | 3300037418 | Bacteria | 1493 |
| 89 | Ga0395898_0012574 | 3300037466 | Bacteria | 8754 |
| 90 | Ga0395898_0099237 | 3300037466 | Bacteria | 2797 |
| 91 | Ga0395905_0005529 | 3300037471 | Bacteria | 12895 |
| 92 | Ga0400484_30562 | 3300038725 | Bacteria | 11555 |
| 93 | Ga0400491_29507 | 3300038727 | Bacteria | 2737 |
| 94 | Ga0400488_01794 | 3300038741 | Bacteria | 15266 |
| 95 | Ga0436361_0046787 | 3300039447 | Bacteria | 28872 |
| 96 | Ga0436361_0069324 | 3300039447 | Bacteria | 28910 |
| 97 | Ga0439443_000784 | 3300042003 | Bacteria | 3146 |
| 98 | Ga0450919_000070 | 3300042121 | Bacteria | 9578 |
| 99 | Ga0439446_0000105 | 3300042156 | Bacteria | 14350 |
| 100 | Ga0439435_0014671 | 3300042436 | Bacteria | 1939 |
| 101 | Ga0439444_0000772 | 3300042437 | Bacteria | 3816 |
| 102 | Ga0439464_0000451 | 3300042439 | Bacteria | 8199 |
| 103 | Ga0439460_0000647 | 3300042461 | Bacteria | 7655 |
| 104 | Ga0450918_000038 | 3300042531 | Bacteria | 26462 |
| 105 | Ga0495603_0019116 | 3300046455 | Bacteria | 4147 |
| 106 | Ga0495580_0031388 | 3300046472 | Bacteria | 3839 |
| 107 | Ga0495585_0006200 | 3300046492 | Bacteria | 7451 |
| 108 | Ga0495583_0029817 | 3300046506 | Bacteria | 2665 |
| 109 | Ga0495610_0017567 | 3300046512 | Bacteria | 4075 |
| 110 | Ga0495620_0029350 | 3300046515 | Bacteria | 2546 |
| 111 | Ga0495631_0001421 | 3300046518 | Bacteria | 14544 |
| 112 | Ga0495632_0011139 | 3300046519 | Bacteria | 5267 |
| 113 | Ga0495654_0079421 | 3300046530 | Bacteria | 1541 |
| 114 | Ga0495640_0250942 | 3300046533 | Bacteria | 1108 |
| 115 | Ga0495609_0020647 | 3300046538 | Bacteria | 3042 |
| 116 | Ga0495621_0000993 | 3300046539 | Bacteria | 7265 |
| 117 | Ga0495633_0064885 | 3300046558 | Bacteria | 1707 |
| 118 | Ga0495634_0211782 | 3300046642 | Bacteria | 1199 |
| 119 | Ga0495611_0044436 | 3300046648 | Bacteria | 1987 |
| 120 | Ga0495625_0000621 | 3300046660 | Bacteria | 51568 |
| 121 | Ga0495647_0006737 | 3300046681 | Bacteria | 3824 |
| 122 | Ga0495658_0018067 | 3300046683 | Bacteria | 3659 |
| 123 | Ga0495624_0054185 | 3300046690 | Bacteria | 2529 |
| 124 | Ga0495660_0021376 | 3300046810 | Bacteria | 3706 |
| 125 | Ga0495581_0083624 | 3300047315 | Bacteria | 1849 |
| 126 | Ga0495615_0034069 | 3300048090 | Bacteria | 1237 |
| 127 | Ga0495626_0076497 | 3300048091 | Bacteria | 1494 |
| 128 | Ga0496108_0001485 | 3300048911 | Bacteria | 18526 |
| 129 | Ga0496110_0003529 | 3300048913 | Bacteria | 12009 |
| 130 | Ga0496111_0003573 | 3300048914 | Bacteria | 9635 |
| 131 | Ga0496112_0018013 | 3300048915 | Bacteria | 6647 |
| 132 | Ga0496113_0004878 | 3300048916 | Bacteria | 8308 |
| 133 | Ga0495678_007036 | 3300049459 | Bacteria | 5895 |
| 134 | Ga0501290_006997 | 3300049513 | Bacteria | 1412 |
| 135 | Ga0501031_0119812 | 3300049568 | Bacteria | 1719 |
| 136 | Ga0501033_0124274 | 3300049570 | Bacteria | 1871 |
| 137 | Ga0501036_0011549 | 3300049572 | Bacteria | 7319 |
| 138 | Ga0501038_0011594 | 3300049574 | Bacteria | 8041 |
| 139 | Ga0501039_0005112 | 3300049575 | Bacteria | 9940 |
| 140 | Ga0501040_0004760 | 3300049576 | Bacteria | 8800 |
| 141 | Ga0501041_0006167 | 3300049577 | Bacteria | 7006 |
| 142 | Ga0501048_0002534 | 3300049582 | Bacteria | 13979 |
| 143 | Ga0501071_0013065 | 3300049587 | Bacteria | 5651 |
| 144 | Ga0501072_0005266 | 3300049588 | Bacteria | 9851 |
| 145 | Ga0501075_0146228 | 3300049591 | Bacteria | 1801 |
| 146 | Ga0501076_0002158 | 3300049592 | Bacteria | 13485 |
| 147 | Ga0501080_0040835 | 3300049742 | Bacteria | 4327 |
| 148 | Ga0501081_0079312 | 3300049743 | Bacteria | 2296 |
| 149 | Ga0501035_0003049 | 3300049822 | Bacteria | 16067 |
| 150 | Ga0501044_0056238 | 3300049823 | Bacteria | 4039 |
| 151 | nmdc:mga00v17_1994_c1 | 3300050491 | Bacteria | 10531 |
| 152 | nmdc:mga00v17_33829_c1 | 3300050491 | Bacteria | 3032 |
| 153 | nmdc:mga0yw44_2600_c1 | 3300050492 | Bacteria | 7755 |
| 154 | nmdc:mga07m45_6513_c1 | 3300050496 | Bacteria | 5908 |
| 155 | nmdc:mga0qj67_58793_c1 | 3300050509 | Bacteria | 3048 |
| 156 | Ga0500610_0013892 | 3300053079 | Bacteria | 3762 |
| 157 | Ga0495619_0278972 | 3300053085 | Bacteria | 1158 |
| 158 | Ga0500594_0004649 | 3300053118 | Bacteria | 3029 |
| 159 | Ga0500568_0004550 | 3300053139 | Bacteria | 7397 |
| 160 | Ga0500568_0008171 | 3300053139 | Bacteria | 5072 |
| 161 | Ga0500616_0004385 | 3300053153 | Bacteria | 10085 |
| 162 | Ga0501082_0049165 | 3300060353 | Bacteria | 3636 |
| 163 | Ga0530510_0018337 | 3300061734 | Bacteria | 4963 |
| 164 | 2508729691 | 2508501050 | Bacteria | 9633614 |
| 165 | 2509074014 | 2508501114 | Bacteria | 7082538 |
| 166 | 2552749095 | 2551306352 | Bacteria | 3873115 |
| 167 | 2554812875 | 2554235132 | Bacteria | 6772433 |
| 168 | 2585265253 | 2582581306 | Bacteria | 6450535 |
| 169 | 2600445915 | 2600254954 | Bacteria | 5100516 |
| 170 | 2602011285 | 2600255389 | Bacteria | 5275336 |
| 171 | 2640734041 | 2639762793 | Bacteria | 3943681 |
| 172 | 2644047278 | 2643221607 | Bacteria | 6314006 |
| 173 | 2644199649 | 2643221636 | Bacteria | 6583769 |
| 174 | 2644362299 | 2643221665 | Bacteria | 4699229 |
| 175 | 2644480067 | 2643221686 | Bacteria | 6310811 |
| 176 | 2678231017 | 2675903507 | Bacteria | 3737791 |
| 177 | 2745160110 | 2744054655 | Bacteria | 3552603 |
| 178 | 2745160689 | 2744054655 | Bacteria | 3552603 |
| 179 | 2774388434 | 2773857761 | Bacteria | 3837365 |
| 180 | 2774437636 | 2773857770 | Bacteria | 3911866 |
| 181 | 2774871272 | 2773857925 | Bacteria | 6472445 |
| 182 | 2823421823 | 2823421272 | Bacteria | 5372474 |
| 183 | 2844537929 | 2844533157 | Bacteria | 7517899 |
| 184 | 2882463144 | 2882456835 | Bacteria | 6863978 |
| 185 | 2916702214 | 2916699645 | Bacteria | 3568996 |
| 186 | 2917701952 | 2917699015 | Bacteria | 7043791 |
| 187 | 2919183928 | 2919182534 | Bacteria | 3907101 |
| 188 | 2919506417 | 2919501602 | Bacteria | 5286340 |
| 189 | 2919506982 | 2919506607 | Bacteria | 3392955 |
| 190 | 2926068117 | 2926063275 | Bacteria | 5285848 |
| 191 | 2928517817 | 2928515477 | Bacteria | 4448421 |
| 192 | 2984569883 | 2984568884 | Bacteria | 3884413 |
| 193 | 637323028 | 637000220 | Bacteria | 7074893 |
| 194 | 8018151527 | 8018150411 | Bacteria | 5549903 |
| 195 | 8033234609 | 8033232454 | Bacteria | 3202805 |
| 196 | 8034966380 | 8034962539 | Bacteria | 4884839 |
| 197 | Ga0495644_0005734 | |||
| 198 | JGI25151J46595_10000064 | |||
| 199 | JGI25151J46595_10005685 | |||
| 200 | JGI25160J50197_1005560 | |||
| 201 | Ga0058692_1000003 | |||
| 202 | Ga0065703_1000213 | |||
| 203 | Ga0070676_10190495 | |||
| 204 | Ga0070675_100037736 | |||
| 205 | Ga0070675_100077036 | |||
| 206 | Ga0070674_100241684 | |||
| 207 | Ga0070667_100352971 | |||
| 208 | Ga0070681_10151508 | |||
| 209 | Ga0068867_100253215 | |||
| 210 | Ga0070665_100098788 | |||
| 211 | Ga0068859_100000890 | |||
| 212 | Ga0068859_100048987 | |||
| 213 | Ga0068861_100000016 | |||
| 214 | Ga0075365_10003161 | |||
| 215 | Ga0075368_10052653 | |||
| 216 | Ga0075363_100166593 | |||
| 217 | Ga0075364_10000982 | |||
| 218 | Ga0075364_10014773 | |||
| 219 | Ga0075362_10039352 | |||
| 220 | Ga0075370_10004101 | |||
| 221 | Ga0068871_100058909 | |||
| 222 | Ga0097620_100000890 | |||
| 223 | Ga0097620_100048985 | |||
| 224 | Ga0105251_10000019 | |||
| 225 | Ga0105244_10048410 | |||
| 226 | Ga0105250_10000188 | |||
| 227 | Ga0105240_10110475 | |||
| 228 | Ga0105245_10121390 | |||
| 229 | Ga0105247_10000595 | |||
| 230 | Ga0105247_10019553 | |||
| 231 | Ga0105243_10000005 | |||
| 232 | Ga0105248_10065768 | |||
| 233 | Ga0105249_10003638 | |||
| 234 | Ga0157373_10026638 | |||
| 235 | Ga0157371_10001928 | |||
| 236 | Ga0157378_10030730 | |||
| 237 | Ga0157378_10146458 | |||
| 238 | Ga0157375_10179470 | |||
| 239 | Ga0163163_10218084 | |||
| 240 | Ga0157380_10092665 | |||
| 241 | Ga0157379_10025734 | |||
| 242 | Ga0157376_10002897 | |||
| 243 | Ga0163161_10112552 | |||
| 244 | Ga0213872_10002180 | |||
| 245 | Ga0209130_1000868 | |||
| 246 | Ga0209025_1000182 | |||
| 247 | Ga0209758_1003776 | |||
| 248 | Ga0207426_1000102 | |||
| 249 | Ga0207696_1000094 | |||
| 250 | Ga0207655_1001537 | |||
| 251 | Ga0207655_1009733 | |||
| 252 | Ga0207713_1000010 | |||
| 253 | Ga0207710_10001221 | |||
| 254 | Ga0207659_10094023 | |||
| 255 | Ga0207709_10000001 | |||
| 256 | Ga0207669_10086865 | |||
| 257 | Ga0207711_10009809 | |||
| 258 | Ga0207711_10037183 | |||
| 259 | Ga0207689_10001586 | |||
| 260 | Ga0207667_10111704 | |||
| 261 | Ga0207712_10005339 | |||
| 262 | Ga0207658_10345329 | |||
| 263 | Ga0207648_10061962 | |||
| 264 | Ga0207675_100000015 | |||
| 265 | Ga0207675_100175749 | |||
| 266 | Ga0209371_1000006 | |||
| 267 | Ga0265337_1000905 | |||
| 268 | Ga0265334_10002100 | |||
| 269 | Ga0307515_10033882 | |||
| 270 | Ga0268256_1000007 | |||
| 271 | Ga0265332_10075993 | |||
| 272 | Ga0265340_10035464 | |||
| 273 | Ga0265331_10021328 | |||
| 274 | Ga0265327_10000580 | |||
| 275 | Ga0307408_100000065 | |||
| 276 | Ga0307514_10151727 | |||
| 277 | Ga0265314_10139159 | |||
| 278 | Ga0316576_10008030 | |||
| 279 | Ga0316576_10027081 | |||
| 280 | Ga0316578_10116461 | |||
| 281 | Ga0307409_100042505 | |||
| 282 | Ga0316584_0040587 | |||
| 283 | Ga0316584_0114528 | |||
| 284 | Ga0395900_0333949 | |||
| 285 | Ga0395898_0012574 | |||
| 286 | Ga0395898_0099237 | |||
| 287 | Ga0395905_0005529 | |||
| 288 | Ga0400484_30562 | |||
| 289 | Ga0400491_29507 | |||
| 290 | Ga0400488_01794 | |||
| 291 | Ga0436361_0046787 | |||
| 292 | Ga0436361_0069324 | |||
| 293 | Ga0439443_000784 | |||
| 294 | Ga0450919_000070 | |||
| 295 | Ga0439446_0000105 | |||
| 296 | Ga0439435_0014671 | |||
| 297 | Ga0439444_0000772 | |||
| 298 | Ga0439464_0000451 | |||
| 299 | Ga0439460_0000647 | |||
| 300 | Ga0450918_000038 | |||
| 301 | Ga0495603_0019116 | |||
| 302 | Ga0495580_0031388 | |||
| 303 | Ga0495585_0006200 | |||
| 304 | Ga0495583_0029817 | |||
| 305 | Ga0495610_0017567 | |||
| 306 | Ga0495620_0029350 | |||
| 307 | Ga0495631_0001421 | |||
| 308 | Ga0495632_0011139 | |||
| 309 | Ga0495654_0079421 | |||
| 310 | Ga0495640_0250942 | |||
| 311 | Ga0495609_0020647 | |||
| 312 | Ga0495621_0000993 | |||
| 313 | Ga0495633_0064885 | |||
| 314 | Ga0495634_0211782 | |||
| 315 | Ga0495611_0044436 | |||
| 316 | Ga0495625_0000621 | |||
| 317 | Ga0495647_0006737 | |||
| 318 | Ga0495658_0018067 | |||
| 319 | Ga0495624_0054185 | |||
| 320 | Ga0495660_0021376 | |||
| 321 | Ga0495581_0083624 | |||
| 322 | Ga0495615_0034069 | |||
| 323 | Ga0495626_0076497 | |||
| 324 | Ga0496108_0001485 | |||
| 325 | Ga0496110_0003529 | |||
| 326 | Ga0496111_0003573 | |||
| 327 | Ga0496112_0018013 | |||
| 328 | Ga0496113_0004878 | |||
| 329 | Ga0495678_007036 | |||
| 330 | Ga0501290_006997 | |||
| 331 | Ga0501031_0119812 | |||
| 332 | Ga0501033_0124274 | |||
| 333 | Ga0501036_0011549 | |||
| 334 | Ga0501038_0011594 | |||
| 335 | Ga0501039_0005112 | |||
| 336 | Ga0501040_0004760 | |||
| 337 | Ga0501041_0006167 | |||
| 338 | Ga0501048_0002534 | |||
| 339 | Ga0501071_0013065 | |||
| 340 | Ga0501072_0005266 | |||
| 341 | Ga0501075_0146228 | |||
| 342 | Ga0501076_0002158 | |||
| 343 | Ga0501080_0040835 | |||
| 344 | Ga0501081_0079312 | |||
| 345 | Ga0501035_0003049 | |||
| 346 | Ga0501044_0056238 | |||
| 347 | nmdc:mga00v17_1994_c1 | |||
| 348 | nmdc:mga00v17_33829_c1 | |||
| 349 | nmdc:mga0yw44_2600_c1 | |||
| 350 | nmdc:mga07m45_6513_c1 | |||
| 351 | nmdc:mga0qj67_58793_c1 | |||
| 352 | Ga0500610_0013892 | |||
| 353 | Ga0495619_0278972 | |||
| 354 | Ga0500594_0004649 | |||
| 355 | Ga0500568_0004550 | |||
| 356 | Ga0500568_0008171 | |||
| 357 | Ga0500616_0004385 | |||
| 358 | Ga0501082_0049165 | |||
| 359 | Ga0530510_0018337 | |||
| 360 | 2508729691 | |||
| 361 | 2509074014 | |||
| 362 | 2552749095 | |||
| 363 | 2554812875 | |||
| 364 | 2585265253 | |||
| 365 | 2600445915 | |||
| 366 | 2602011285 | |||
| 367 | 2640734041 | |||
| 368 | 2644047278 | |||
| 369 | 2644199649 | |||
| 370 | 2644362299 | |||
| 371 | 2644480067 | |||
| 372 | 2678231017 | |||
| 373 | 2745160110 | |||
| 374 | 2745160689 | |||
| 375 | 2774388434 | |||
| 376 | 2774437636 | |||
| 377 | 2774871272 | |||
| 378 | 2823421823 | |||
| 379 | 2844537929 | |||
| 380 | 2882463144 | |||
| 381 | 2916702214 | |||
| 382 | 2917701952 | |||
| 383 | 2919183928 | |||
| 384 | 2919506417 | |||
| 385 | 2919506982 | |||
| 386 | 2926068117 | |||
| 387 | 2928517817 | |||
| 388 | 2984569883 | |||
| 389 | 637323028 | |||
| 390 | 8018151527 | |||
| 391 | 8033234609 | |||
| 392 | 8034966380 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1r30-assembly1.cif.gz_A | the crystal structure of biotin synthase, an s-adenosylmethionine-dependent radical enzyme | 0.9868 | 15 | 323 |
| 1r30-assembly1.cif.gz_A | the crystal structure of biotin synthase, an s-adenosylmethionine-dependent radical enzyme | 0.9712 | 15 | 323 |
| 5ff4-assembly1.cif.gz_A | hyde from t. maritima in complex with (2r,4r)-tmetda | 0.8688 | 19 | 328 |
| 7o26-assembly1.cif.gz_A | complex-b bound [fefe]-hydrogenase maturase hyde fromt. maritima (5'da + methionine) | 0.8685 | 19 | 328 |
| 7o1o-assembly1.cif.gz_A | complex-b bound [fefe]-hydrogenase maturase hyde fromt. maritima (auxiliary cluster deleted variant) | 0.8674 | 19 | 328 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O59778_20_335_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9872 | 15 | 325 | 3.20.20.70 |
| af_O59778_20_335_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9687 | 15 | 325 | 3.20.20.70 |
| af_Q2FVJ7_11_319_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9407 | 17 | 324 | 3.20.20.70 |
| af_A0A1D6M1W1_19_103_3.40.50.10800 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NadA-like | 0.9397 | 248 | 316 | 3.40.50.10800 |
| af_P9WPQ7_39_344_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9296 | 21 | 325 | 3.20.20.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A379WY99-F1-model_v4 | Biotin synthetase (EC 2.8.1.6) | 1 | 124 | 223 |
GO:0004076
GO:0009102 GO:0046872 GO:0051537 GO:0051539 |
| AF-A0A4Q0Q4A2-F1-model_v4 | Biotin synthase | 0.9958 | 196 | 323 |
GO:0004076
GO:0009102 GO:0051537 GO:0051539 |
| AF-A0A527GJE9-F1-model_v4 | Biotin synthase | 0.9955 | 63 | 163 |
GO:0004076
GO:0009102 GO:0046872 GO:0051537 GO:0051539 |
| AF-A0A522ACY0-F1-model_v4 | Biotin synthase (EC 2.8.1.6) | 0.9946 | 15 | 327 |
GO:0004076
GO:0005506 GO:0009102 GO:0051537 GO:0051539 |
| AF-A0A4R6V039-F1-model_v4 | Biotin synthase (EC 2.8.1.6) | 0.9946 | 13 | 325 |
GO:0004076
GO:0005506 GO:0009102 GO:0051537 GO:0051539 |