F302091

General Info

Members Datasets Scaffolds Average Seq Length
196 139 392 293

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0000245|Ga0496115_0000245_12175_13113
Length 312
Sequence VKVTRLPDVERSEGRSVAVGTFDGVHLGHREVIAGSDTVLTFDPHPVSIVAPQHSPKQLTTPARKAELIASLGVAEMVVIPFDAEFAKRSAGEFVEDVLVGALGARSVAIGENFRFGHKAQGDPRLLQADERFATTVHPLLEVGGEIVSSSHIRGLVLAGDVAEANRLLGARFQLCGEVSHGDERGRELGFPTANLVPDDDFACPGHGVYACIASVAGADGPLGAGGVAAAVSIGVRPTFQTGRGELIEAYLLDFEGDLYGQSLCLDFLVRLRGERRFDTAEALVEQMHRDVEQTRELAAAETAGAERVSSD

Samples

Sample ID Description Type Environment
1 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
81 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
82 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
83 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
84 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
85 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
96 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
97 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
105 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
136 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
137 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
138 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0.51
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.53
Nodule 0
Rhizoplane 22.96
Rhizosphere 73.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496115_0000245 3300048918 Bacteria 49174
2 Ga0070658_10249711 3300005327 Bacteria 1505
3 Ga0070683_100115468 3300005329 Bacteria 2534
4 Ga0068869_100226588 3300005334 Bacteria 1484
5 Ga0070682_100242677 3300005337 Bacteria 1294
6 Ga0070660_100078774 3300005339 Bacteria 2584
7 Ga0070671_100257027 3300005355 Bacteria 1484
8 Ga0070674_100149995 3300005356 Bacteria 1758
9 Ga0070710_10140833 3300005437 Bacteria 1479
10 Ga0070701_10105456 3300005438 Bacteria 1567
11 Ga0070711_100031264 3300005439 Bacteria 3533
12 Ga0070711_100204238 3300005439 Bacteria 1527
13 Ga0070663_100121725 3300005455 Bacteria 1972
14 Ga0070662_100156332 3300005457 Bacteria 1780
15 Ga0070681_10449777 3300005458 Bacteria 1200
16 Ga0070685_10018245 3300005466 Bacteria 3770
17 Ga0070684_100035034 3300005535 Bacteria 4294
18 Ga0070697_100185663 3300005536 Bacteria 1763
19 Ga0068853_100236013 3300005539 Bacteria 1674
20 Ga0070693_100059942 3300005547 Bacteria 2208
21 Ga0070664_100033731 3300005564 Bacteria 4290
22 Ga0068854_100116350 3300005578 Bacteria 2023
23 Ga0070702_100095350 3300005615 Bacteria 1813
24 Ga0068852_100117843 3300005616 Bacteria 2425
25 Ga0068861_100020556 3300005719 Bacteria 4732
26 Ga0068861_100103328 3300005719 Bacteria 2271
27 Ga0068861_100469866 3300005719 Bacteria 1131
28 Ga0068870_10185266 3300005840 Bacteria 1253
29 Ga0068858_100063690 3300005842 Bacteria 3411
30 Ga0068862_100145330 3300005844 Bacteria 2107
31 Ga0081455_10002456 3300005937 Bacteria 22063
32 Ga0081540_1002479 3300005983 Bacteria 15034
33 Ga0081540_1087243 3300005983 Bacteria 1383
34 Ga0081539_10008072 3300005985 Bacteria 9317
35 Ga0070716_100129089 3300006173 Bacteria 1595
36 Ga0070712_100081442 3300006175 Bacteria 2345
37 Ga0075430_100008964 3300006846 Bacteria 8452
38 Ga0075431_100118060 3300006847 Bacteria 2737
39 Ga0075433_10298110 3300006852 Bacteria 1428
40 Ga0105240_10003474 3300009093 Bacteria 24448
41 Ga0105245_10200762 3300009098 Bacteria 1915
42 Ga0105247_10065710 3300009101 Bacteria 2257
43 Ga0105243_10446715 3300009148 Bacteria 1212
44 Ga0105243_10470376 3300009148 Bacteria 1184
45 Ga0105237_10004462 3300009545 Bacteria 16176
46 Ga0105238_10705499 3300009551 Bacteria 1021
47 Ga0105249_10240170 3300009553 Bacteria 1791
48 Ga0157369_10594739 3300013105 Bacteria 1142
49 Ga0163162_10223759 3300013306 Bacteria 2011
50 Ga0157372_10131409 3300013307 Bacteria 2881
51 Ga0157372_10516957 3300013307 Bacteria 1392
52 Ga0163163_10103024 3300014325 Bacteria 2878
53 Ga0182008_10084659 3300014497 Bacteria 1561
54 Ga0182008_10144024 3300014497 Bacteria 1193
55 Ga0157377_10037984 3300014745 Bacteria 2656
56 Ga0163161_10179516 3300017792 Bacteria 1622
57 Ga0206356_11883485 3300020070 Bacteria 1190
58 Ga0207688_10043095 3300025901 Bacteria 2513
59 Ga0207688_10054618 3300025901 Bacteria 2241
60 Ga0207643_10038310 3300025908 Bacteria 2692
61 Ga0207654_10249826 3300025911 Bacteria 1188
62 Ga0207707_10383637 3300025912 Bacteria 1208
63 Ga0207695_10011296 3300025913 Bacteria 10824
64 Ga0207671_10004915 3300025914 Bacteria 12546
65 Ga0207693_10033360 3300025915 Bacteria 4062
66 Ga0207693_10083602 3300025915 Bacteria 2501
67 Ga0207693_10093700 3300025915 Bacteria 2354
68 Ga0207663_10000267 3300025916 Bacteria 22666
69 Ga0207663_10230984 3300025916 Bacteria 1351
70 Ga0207662_10041131 3300025918 Bacteria 2720
71 Ga0207657_10129066 3300025919 Bacteria 2074
72 Ga0207681_10063956 3300025923 Bacteria 2539
73 Ga0207659_10048536 3300025926 Bacteria 3008
74 Ga0207700_10024685 3300025928 Bacteria 4164
75 Ga0207664_10351497 3300025929 Bacteria 1305
76 Ga0207664_10440663 3300025929 Bacteria 1162
77 Ga0207644_10217416 3300025931 Bacteria 1513
78 Ga0207686_10058438 3300025934 Bacteria 2431
79 Ga0207709_10072084 3300025935 Bacteria 2196
80 Ga0207711_10504588 3300025941 Bacteria 1127
81 Ga0207679_10257786 3300025945 Bacteria 1486
82 Ga0207651_10210828 3300025960 Bacteria 1564
83 Ga0207712_10107407 3300025961 Bacteria 2087
84 Ga0207678_10086741 3300026067 Bacteria 2675
85 Ga0207708_10026331 3300026075 Bacteria 4400
86 Ga0207648_10230290 3300026089 Bacteria 1648
87 Ga0207648_10249983 3300026089 Bacteria 1581
88 Ga0207674_10152588 3300026116 Bacteria 2267
89 Ga0207675_100057961 3300026118 Bacteria 3615
90 Ga0207675_100497783 3300026118 Bacteria 1213
91 Ga0207698_10055920 3300026142 Bacteria 3044
92 Ga0268266_10511431 3300028379 Bacteria 1147
93 Ga0268265_10199939 3300028380 Bacteria 1733
94 Ga0265337_1003763 3300028556 Bacteria 6471
95 Ga0265326_10003325 3300028558 Bacteria 5303
96 Ga0265319_1000079 3300028563 Bacteria 75683
97 Ga0265319_1000842 3300028563 Bacteria 19569
98 Ga0265318_10000811 3300028577 Bacteria 20649
99 Ga0265322_10018011 3300028654 Bacteria 2032
100 Ga0265336_10000005 3300028666 Bacteria 399349
101 Ga0265338_10000001 3300028800 Bacteria 1177449
102 Ga0265324_10019049 3300029957 Bacteria 2474
103 Ga0265320_10068647 3300031240 Bacteria 1675
104 Ga0265340_10000001 3300031247 Bacteria 1647668
105 Ga0265327_10011218 3300031251 Bacteria 6205
106 Ga0265327_10110377 3300031251 Bacteria 1315
107 Ga0265316_10014138 3300031344 Bacteria 7041
108 Ga0307415_100078161 3300032126 Bacteria 2353
109 Ga0373943_0236211 3300035170 Bacteria 1023
110 Ga0395901_0301818 3300038443 Bacteria 1660
111 Ga0451853_0830846 3300041512 Bacteria 1536
112 Ga0466966_0078201 3300044684 Bacteria 2063
113 Ga0466961_0072888 3300044693 Bacteria 2178
114 Ga0466963_0202603 3300044694 Bacteria 1388
115 Ga0466960_0004010 3300044901 Bacteria 5724
116 Ga0466960_0022528 3300044901 Bacteria 2818
117 Ga0466960_0052129 3300044901 Bacteria 1978
118 Ga0466960_0066518 3300044901 Bacteria 1783
119 Ga0466967_0035350 3300045976 Bacteria 4252
120 Ga0466967_0061969 3300045976 Bacteria 3319
121 Ga0466967_0176624 3300045976 Bacteria 2012
122 Ga0495629_0361771 3300046459 Bacteria 989
123 Ga0495651_0093234 3300046462 Bacteria 2255
124 Ga0495653_0002794 3300046463 Bacteria 13933
125 Ga0495650_0000054 3300046471 Bacteria 313631
126 Ga0495596_0082357 3300046500 Bacteria 1249
127 Ga0495618_0000115 3300046514 Bacteria 58375
128 Ga0495630_0002041 3300046517 Bacteria 14044
129 Ga0495630_0313551 3300046517 Bacteria 1199
130 Ga0495645_0000012 3300046543 Bacteria 209044
131 Ga0495645_0001758 3300046543 Bacteria 14726
132 Ga0495635_0112996 3300046663 Bacteria 1855
133 Ga0495657_0000007 3300046675 Bacteria 222471
134 Ga0495657_0226945 3300046675 Bacteria 1131
135 Ga0495646_0114926 3300046680 Bacteria 1529
136 Ga0495604_0000180 3300047317 Bacteria 56391
137 Ga0495674_0462085 3300047319 Bacteria 1019
138 Ga0495677_0063001 3300047445 Bacteria 1377
139 Ga0495684_0013293 3300047471 Bacteria 6345
140 Ga0495684_0068408 3300047471 Bacteria 2700
141 Ga0496100_0067704 3300048903 Bacteria 2372
142 Ga0496100_0111639 3300048903 Bacteria 1900
143 Ga0496101_0005130 3300048904 Bacteria 8328
144 Ga0496101_0116452 3300048904 Bacteria 2016
145 Ga0496101_0559700 3300048904 Bacteria 904
146 Ga0496102_0090969 3300048905 Bacteria 2824
147 Ga0496104_0000026 3300048907 Bacteria 210098
148 Ga0496104_0009205 3300048907 Bacteria 8780
149 Ga0496105_0008008 3300048908 Bacteria 8210
150 Ga0496105_0139294 3300048908 Bacteria 1998
151 Ga0496105_0228825 3300048908 Bacteria 1511
152 Ga0496107_0006595 3300048910 Bacteria 7990
153 Ga0496107_0131143 3300048910 Bacteria 1850
154 Ga0496108_0001007 3300048911 Bacteria 22008
155 Ga0496108_0108422 3300048911 Bacteria 2372
156 Ga0496108_0115892 3300048911 Bacteria 2295
157 Ga0496108_0137096 3300048911 Bacteria 2106
158 Ga0496108_0296456 3300048911 Bacteria 1408
159 Ga0496108_0360283 3300048911 Bacteria 1269
160 Ga0496108_0552166 3300048911 Bacteria 1005
161 Ga0496109_0058716 3300048912 Bacteria 3514
162 Ga0496109_0204732 3300048912 Bacteria 1855
163 Ga0496109_0215143 3300048912 Bacteria 1807
164 Ga0496110_0000183 3300048913 Bacteria 39196
165 Ga0496110_0224562 3300048913 Bacteria 1708
166 Ga0496110_0229389 3300048913 Bacteria 1688
167 Ga0496110_0249444 3300048913 Bacteria 1615
168 Ga0496111_0000006 3300048914 Bacteria 107643
169 Ga0496111_0005221 3300048914 Bacteria 8282
170 Ga0496111_0094716 3300048914 Bacteria 2190
171 Ga0496111_0210190 3300048914 Bacteria 1445
172 Ga0496111_0250600 3300048914 Bacteria 1314
173 Ga0496112_0011187 3300048915 Bacteria 8183
174 Ga0496112_0073930 3300048915 Bacteria 3369
175 Ga0496112_0093222 3300048915 Bacteria 2982
176 Ga0496112_0229433 3300048915 Bacteria 1811
177 Ga0496112_0522787 3300048915 Bacteria 1121
178 Ga0496113_0027647 3300048916 Bacteria 4069
179 Ga0496113_0070104 3300048916 Bacteria 2664
180 Ga0496113_0170568 3300048916 Bacteria 1723
181 Ga0496114_0552837 3300048917 Bacteria 1017
182 Ga0496114_0698935 3300048917 Bacteria 889
183 Ga0496115_0000222 3300048918 Bacteria 52327
184 Ga0496115_0015070 3300048918 Bacteria 5859
185 Ga0496121_0168271 3300048924 Bacteria 1595
186 Ga0496124_0258027 3300048927 Bacteria 1285
187 nmdc:mga0qj67_23235_c1 3300050509 Bacteria 4768
188 nmdc:mga06r32_368495_c1 3300050510 Bacteria 1420
189 nmdc:mga08y16_128961_c1 3300050511 Bacteria 2631
190 nmdc:mga0a205_246136_c1 3300050515 Bacteria 1668
191 Ga0495601_0001588 3300053077 Bacteria 12547
192 Ga0495612_0000033 3300053078 Bacteria 77643
193 Ga0500556_0000982 3300053104 Bacteria 15104
194 Ga0500616_0006500 3300053153 Bacteria 7646
195 Ga0500616_0010852 3300053153 Bacteria 5430
196 Ga0501082_0348624 3300060353 Bacteria 1291
197 Ga0496115_0000245
198 Ga0070658_10249711
199 Ga0070683_100115468
200 Ga0068869_100226588
201 Ga0070682_100242677
202 Ga0070660_100078774
203 Ga0070671_100257027
204 Ga0070674_100149995
205 Ga0070710_10140833
206 Ga0070701_10105456
207 Ga0070711_100031264
208 Ga0070711_100204238
209 Ga0070663_100121725
210 Ga0070662_100156332
211 Ga0070681_10449777
212 Ga0070685_10018245
213 Ga0070684_100035034
214 Ga0070697_100185663
215 Ga0068853_100236013
216 Ga0070693_100059942
217 Ga0070664_100033731
218 Ga0068854_100116350
219 Ga0070702_100095350
220 Ga0068852_100117843
221 Ga0068861_100020556
222 Ga0068861_100103328
223 Ga0068861_100469866
224 Ga0068870_10185266
225 Ga0068858_100063690
226 Ga0068862_100145330
227 Ga0081455_10002456
228 Ga0081540_1002479
229 Ga0081540_1087243
230 Ga0081539_10008072
231 Ga0070716_100129089
232 Ga0070712_100081442
233 Ga0075430_100008964
234 Ga0075431_100118060
235 Ga0075433_10298110
236 Ga0105240_10003474
237 Ga0105245_10200762
238 Ga0105247_10065710
239 Ga0105243_10446715
240 Ga0105243_10470376
241 Ga0105237_10004462
242 Ga0105238_10705499
243 Ga0105249_10240170
244 Ga0157369_10594739
245 Ga0163162_10223759
246 Ga0157372_10131409
247 Ga0157372_10516957
248 Ga0163163_10103024
249 Ga0182008_10084659
250 Ga0182008_10144024
251 Ga0157377_10037984
252 Ga0163161_10179516
253 Ga0206356_11883485
254 Ga0207688_10043095
255 Ga0207688_10054618
256 Ga0207643_10038310
257 Ga0207654_10249826
258 Ga0207707_10383637
259 Ga0207695_10011296
260 Ga0207671_10004915
261 Ga0207693_10033360
262 Ga0207693_10083602
263 Ga0207693_10093700
264 Ga0207663_10000267
265 Ga0207663_10230984
266 Ga0207662_10041131
267 Ga0207657_10129066
268 Ga0207681_10063956
269 Ga0207659_10048536
270 Ga0207700_10024685
271 Ga0207664_10351497
272 Ga0207664_10440663
273 Ga0207644_10217416
274 Ga0207686_10058438
275 Ga0207709_10072084
276 Ga0207711_10504588
277 Ga0207679_10257786
278 Ga0207651_10210828
279 Ga0207712_10107407
280 Ga0207678_10086741
281 Ga0207708_10026331
282 Ga0207648_10230290
283 Ga0207648_10249983
284 Ga0207674_10152588
285 Ga0207675_100057961
286 Ga0207675_100497783
287 Ga0207698_10055920
288 Ga0268266_10511431
289 Ga0268265_10199939
290 Ga0265337_1003763
291 Ga0265326_10003325
292 Ga0265319_1000079
293 Ga0265319_1000842
294 Ga0265318_10000811
295 Ga0265322_10018011
296 Ga0265336_10000005
297 Ga0265338_10000001
298 Ga0265324_10019049
299 Ga0265320_10068647
300 Ga0265340_10000001
301 Ga0265327_10011218
302 Ga0265327_10110377
303 Ga0265316_10014138
304 Ga0307415_100078161
305 Ga0373943_0236211
306 Ga0395901_0301818
307 Ga0451853_0830846
308 Ga0466966_0078201
309 Ga0466961_0072888
310 Ga0466963_0202603
311 Ga0466960_0004010
312 Ga0466960_0022528
313 Ga0466960_0052129
314 Ga0466960_0066518
315 Ga0466967_0035350
316 Ga0466967_0061969
317 Ga0466967_0176624
318 Ga0495629_0361771
319 Ga0495651_0093234
320 Ga0495653_0002794
321 Ga0495650_0000054
322 Ga0495596_0082357
323 Ga0495618_0000115
324 Ga0495630_0002041
325 Ga0495630_0313551
326 Ga0495645_0000012
327 Ga0495645_0001758
328 Ga0495635_0112996
329 Ga0495657_0000007
330 Ga0495657_0226945
331 Ga0495646_0114926
332 Ga0495604_0000180
333 Ga0495674_0462085
334 Ga0495677_0063001
335 Ga0495684_0013293
336 Ga0495684_0068408
337 Ga0496100_0067704
338 Ga0496100_0111639
339 Ga0496101_0005130
340 Ga0496101_0116452
341 Ga0496101_0559700
342 Ga0496102_0090969
343 Ga0496104_0000026
344 Ga0496104_0009205
345 Ga0496105_0008008
346 Ga0496105_0139294
347 Ga0496105_0228825
348 Ga0496107_0006595
349 Ga0496107_0131143
350 Ga0496108_0001007
351 Ga0496108_0108422
352 Ga0496108_0115892
353 Ga0496108_0137096
354 Ga0496108_0296456
355 Ga0496108_0360283
356 Ga0496108_0552166
357 Ga0496109_0058716
358 Ga0496109_0204732
359 Ga0496109_0215143
360 Ga0496110_0000183
361 Ga0496110_0224562
362 Ga0496110_0229389
363 Ga0496110_0249444
364 Ga0496111_0000006
365 Ga0496111_0005221
366 Ga0496111_0094716
367 Ga0496111_0210190
368 Ga0496111_0250600
369 Ga0496112_0011187
370 Ga0496112_0073930
371 Ga0496112_0093222
372 Ga0496112_0229433
373 Ga0496112_0522787
374 Ga0496113_0027647
375 Ga0496113_0070104
376 Ga0496113_0170568
377 Ga0496114_0552837
378 Ga0496114_0698935
379 Ga0496115_0000222
380 Ga0496115_0015070
381 Ga0496121_0168271
382 Ga0496124_0258027
383 nmdc:mga0qj67_23235_c1
384 nmdc:mga06r32_368495_c1
385 nmdc:mga08y16_128961_c1
386 nmdc:mga0a205_246136_c1
387 Ga0495601_0001588
388 Ga0495612_0000033
389 Ga0500556_0000982
390 Ga0500616_0006500
391 Ga0500616_0010852
392 Ga0501082_0348624

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01687

Flavokinase

Riboflavin kinase

169

299

0.95

PF06574

FAD_syn

FAD synthetase

8

152

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fnz-assembly1.cif.gz_A f206w mutant of fad synthetase from corynebacterium ammoniagenes 0.8544 1 282
3op1-assembly1.cif.gz_A crystal structure of macrolide-efflux protein sp_1110 from streptococcus pneumoniae 0.852 1 278
2x0k-assembly1.cif.gz_A crystal structure of modular fad synthetase from corynebacterium ammoniagenes 0.8511 1 282
5fnz-assembly1.cif.gz_B f206w mutant of fad synthetase from corynebacterium ammoniagenes 0.8495 1 282
3zug-assembly1.cif.gz_A e268d mutant of fad synthetase from corynebacterium ammoniagenes 0.8494 1 282
ID Description Score Start End Superfamily
af_I6X5C9_8_196_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9465 1 169 3.40.50.620
af_Q2G2Q2_2_185_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9401 2 169 3.40.50.620
3zugB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9383 1 171 3.40.50.620
af_P0AG40_1_186_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9317 1 155 3.40.50.620
3op1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8754 1 171 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7W0TJD1-F1-model_v4 FAD synthase (EC 2.7.7.2) 1.003 1 86 GO:0003919
GO:0005524
GO:0006747
GO:0009231
GO:0016301
AF-A0A7W0TJD1-F1-model_v4 FAD synthase (EC 2.7.7.2) 0.9803 1 86 GO:0003919
GO:0005524
GO:0006747
GO:0009231
GO:0016301
AF-A0A4Q6IPZ9-F1-model_v4 FAD synthase (EC 2.7.7.2) 0.9726 15 116 GO:0003919
GO:0005524
GO:0006747
GO:0009231
AF-A0A7C2DW46-F1-model_v4 deleted 0.9648 12 137
AF-A0A1C6J538-F1-model_v4 riboflavin kinase (EC 2.7.1.26) 0.9585 191 282 GO:0005524
GO:0008531
GO:0009231
GO:0009398

Map