F303565
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 197 | 163 | 165 | 142 |
Family's Representative Sequence
| Representative Sequence | 3300049571|Ga0501034_0118115|Ga0501034_0118115_1520_1999 |
| Length | 159 |
| Sequence | MSSPRRAPSRTGEAMLLHGACHCGRVEVSFETALAPATMEIRACQCSFCRRHGAKTVTDPNGRVTIAAPAGGLSRYRFGLRTADYLLCANCGVYIAAVINDGPGKRATLNAAGLMIEGLHERTAEPVDLDHEDATGRRERRHRNWTPAHFITSAARRSG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237090 | Mesorhizobium sp. WSM3224 | Isolate | Nodule |
| 2 | 2599185301 | Mesorhizobium sp. NFR06 | Isolate | Rhizoplane |
| 3 | 2693429783 | Mesorhizobium sp. LCM 4577 | Isolate | Rhizosphere |
| 4 | 2693429784 | Mesorhizobium sp. LCM 4576 | Isolate | Rhizosphere |
| 5 | 2857349434 | Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 | Isolate | Nodule |
| 6 | 2871495908 | Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 | Isolate | Nodule |
| 7 | 2876369609 | Mesorhizobium sp. USDA-HM6 | Isolate | Unclassified |
| 8 | 2876392853 | Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 | Isolate | Nodule |
| 9 | 2878760144 | Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 | Isolate | Nodule |
| 10 | 2878767105 | Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 | Isolate | Nodule |
| 11 | 2881147464 | Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 | Isolate | Nodule |
| 12 | 2881161766 | Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 | Isolate | Nodule |
| 13 | 2885305155 | Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 | Isolate | Nodule |
| 14 | 2885326080 | Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 | Isolate | Nodule |
| 15 | 2885334103 | Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 | Isolate | Nodule |
| 16 | 2903540706 | Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 | Isolate | Nodule |
| 17 | 2904659560 | Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 | Isolate | Nodule |
| 18 | 2937994558 | Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 | Isolate | Nodule |
| 19 | 2938014810 | Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 | Isolate | Nodule |
| 20 | 2958165035 | Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 | Isolate | Nodule |
| 21 | 2961114664 | Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 | Isolate | Nodule |
| 22 | 2961163497 | Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 | Isolate | Nodule |
| 23 | 2965018300 | Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 | Isolate | Nodule |
| 24 | 2968110612 | Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 | Isolate | Nodule |
| 25 | 2968171901 | Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 | Isolate | Nodule |
| 26 | 2970554993 | Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 | Isolate | Nodule |
| 27 | 2977864932 | Mesorhizobium tamadayense DSM 28320 | Isolate | Nodule |
| 28 | 2977942078 | Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 | Isolate | Nodule |
| 29 | 2987636660 | Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 | Isolate | Nodule |
| 30 | 2987659509 | Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 | Isolate | Nodule |
| 31 | 3004188549 | Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 | Isolate | Nodule |
| 32 | 3004203850 | Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 | Isolate | Nodule |
| 33 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 34 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 35 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 36 | 3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 37 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 44 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 45 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 46 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 47 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 48 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 49 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 50 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 51 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 52 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 53 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 54 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 55 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 56 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 57 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 59 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 60 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 61 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 62 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 63 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 65 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 66 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 69 | 3300012480 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610 | Metagenome | Rhizosphere |
| 70 | 3300012485 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610 | Metagenome | Rhizosphere |
| 71 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 72 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 73 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 74 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 75 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 76 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 77 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 90 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 91 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 93 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 94 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 95 | 3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Metagenome | Rhizosphere |
| 96 | 3300034820 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 | Metagenome | Rhizosphere |
| 97 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 98 | 3300035085 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 | Metagenome | Rhizosphere |
| 99 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 100 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 101 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 102 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 103 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 104 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 105 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 106 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 107 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 108 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 109 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 110 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 111 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 112 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 113 | 3300042134 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 | Metagenome | Rhizosphere |
| 114 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 115 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 120 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 121 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 122 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 123 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 131 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 136 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 147 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 148 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 149 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 150 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 151 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 152 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 153 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 154 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 155 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 156 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 157 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 158 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 159 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 160 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 161 | 3300053160 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere | Metagenome | Endosphere |
| 162 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 163 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 83.76 |
| Metatranscriptomes | 0 |
| Isolates | 16.24 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.64 |
| Nodule | 14.21 |
| Rhizoplane | 1.02 |
| Rhizosphere | 68.53 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.6 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25156J39149_1012070 | 3300002705 | Bacteria | 1923 |
| 2 | JGI25157J39369_1001050 | 3300002741 | Bacteria | 12594 |
| 3 | JGI25165J46597_1000016 | 3300003214 | Bacteria | 377866 |
| 4 | JGI25405J52794_10037414 | 3300003911 | Bacteria | 1020 |
| 5 | Ga0070668_100411627 | 3300005347 | Bacteria | 1156 |
| 6 | Ga0070669_100505140 | 3300005353 | Bacteria | 1003 |
| 7 | Ga0070671_100300775 | 3300005355 | Bacteria | 1366 |
| 8 | Ga0070671_100315325 | 3300005355 | Bacteria | 1332 |
| 9 | Ga0070711_100663686 | 3300005439 | Unclassified | 875 |
| 10 | Ga0070663_100880669 | 3300005455 | Bacteria | 772 |
| 11 | Ga0070678_101691463 | 3300005456 | Bacteria | 595 |
| 12 | Ga0070698_100398293 | 3300005471 | Bacteria | 1310 |
| 13 | Ga0070665_100168224 | 3300005548 | Bacteria | 2194 |
| 14 | Ga0070704_100166270 | 3300005549 | Bacteria | 1749 |
| 15 | Ga0068856_100653631 | 3300005614 | Bacteria | 1072 |
| 16 | Ga0068859_101454650 | 3300005617 | Bacteria | 756 |
| 17 | Ga0068863_101521096 | 3300005841 | Bacteria | 678 |
| 18 | Ga0068862_100808056 | 3300005844 | Bacteria | 916 |
| 19 | Ga0081455_10006926 | 3300005937 | Bacteria | 12058 |
| 20 | Ga0081540_1005477 | 3300005983 | Bacteria | 9470 |
| 21 | Ga0081540_1020686 | 3300005983 | Bacteria | 3947 |
| 22 | Ga0075365_10075216 | 3300006038 | Bacteria | 2279 |
| 23 | Ga0075365_10229186 | 3300006038 | Bacteria | 1304 |
| 24 | Ga0075368_10005738 | 3300006042 | Bacteria | 4291 |
| 25 | Ga0075363_100100883 | 3300006048 | Bacteria | 1597 |
| 26 | Ga0075432_10242721 | 3300006058 | Bacteria | 728 |
| 27 | Ga0075367_10246883 | 3300006178 | Bacteria | 1119 |
| 28 | Ga0097621_100295136 | 3300006237 | Bacteria | 1430 |
| 29 | Ga0068871_100225323 | 3300006358 | Bacteria | 1626 |
| 30 | Ga0075428_100042068 | 3300006844 | Bacteria | 5025 |
| 31 | Ga0075433_10006321 | 3300006852 | Bacteria | 9359 |
| 32 | Ga0075433_10172982 | 3300006852 | Bacteria | 1922 |
| 33 | Ga0075434_100000232 | 3300006871 | Bacteria | 38374 |
| 34 | Ga0075434_100052375 | 3300006871 | Bacteria | 4055 |
| 35 | Ga0075429_101533904 | 3300006880 | Unclassified | 579 |
| 36 | Ga0097620_101454106 | 3300006931 | Bacteria | 756 |
| 37 | Ga0075435_100051662 | 3300007076 | Bacteria | 3311 |
| 38 | Ga0075435_100175491 | 3300007076 | Bacteria | 1809 |
| 39 | Ga0105240_10507674 | 3300009093 | Bacteria | 1340 |
| 40 | Ga0111539_10059688 | 3300009094 | Bacteria | 4522 |
| 41 | Ga0111539_10114813 | 3300009094 | Bacteria | 3158 |
| 42 | Ga0114129_10081512 | 3300009147 | Bacteria | 4497 |
| 43 | Ga0105239_10187927 | 3300010375 | Bacteria | 2312 |
| 44 | Ga0157346_1014064 | 3300012480 | Bacteria | 626 |
| 45 | Ga0157325_1013742 | 3300012485 | Unclassified | 641 |
| 46 | Ga0157380_13284942 | 3300014326 | Unclassified | 517 |
| 47 | Ga0213872_10166263 | 3300021361 | Bacteria | 958 |
| 48 | Ga0209026_1000005 | 3300025250 | Bacteria | 731387 |
| 49 | Ga0209759_1000292 | 3300025256 | Bacteria | 69246 |
| 50 | Ga0209233_1000068 | 3300025261 | Bacteria | 377969 |
| 51 | Ga0209758_1003476 | 3300025297 | Bacteria | 14271 |
| 52 | Ga0207647_10007663 | 3300025904 | Bacteria | 7779 |
| 53 | Ga0207695_10666080 | 3300025913 | Bacteria | 921 |
| 54 | Ga0207671_10593039 | 3300025914 | Bacteria | 883 |
| 55 | Ga0207663_10733130 | 3300025916 | Unclassified | 784 |
| 56 | Ga0207681_10297537 | 3300025923 | Bacteria | 1276 |
| 57 | Ga0207704_11668122 | 3300025938 | Bacteria | 548 |
| 58 | Ga0207691_10248928 | 3300025940 | Bacteria | 1534 |
| 59 | Ga0207639_10387896 | 3300026041 | Bacteria | 1256 |
| 60 | Ga0207639_10520054 | 3300026041 | Bacteria | 1090 |
| 61 | Ga0207678_10165980 | 3300026067 | Bacteria | 1885 |
| 62 | Ga0207641_11197147 | 3300026088 | Bacteria | 759 |
| 63 | Ga0207674_10141196 | 3300026116 | Bacteria | 2368 |
| 64 | Ga0207683_11558095 | 3300026121 | Bacteria | 610 |
| 65 | Ga0209813_10020877 | 3300027866 | Bacteria | 1837 |
| 66 | Ga0207428_10440889 | 3300027907 | Unclassified | 950 |
| 67 | Ga0268266_10030376 | 3300028379 | Bacteria | 4590 |
| 68 | Ga0307515_10428849 | 3300028794 | Bacteria | 941 |
| 69 | Ga0307513_10109922 | 3300031456 | Bacteria | 2753 |
| 70 | Ga0307516_10555348 | 3300031730 | Bacteria | 802 |
| 71 | Ga0373958_0117895 | 3300034819 | Unclassified | 639 |
| 72 | Ga0373959_0063781 | 3300034820 | Bacteria | 820 |
| 73 | Ga0373928_0009137 | 3300035084 | Bacteria | 1934 |
| 74 | Ga0373929_0012245 | 3300035085 | Bacteria | 1628 |
| 75 | Ga0373939_0012427 | 3300035114 | Bacteria | 2170 |
| 76 | Ga0373939_0084754 | 3300035114 | Unclassified | 1060 |
| 77 | Ga0373960_0048956 | 3300035121 | Bacteria | 1248 |
| 78 | Ga0373943_0098756 | 3300035170 | Bacteria | 1524 |
| 79 | Ga0373942_0010106 | 3300035207 | Bacteria | 2214 |
| 80 | Ga0373935_0596228 | 3300035692 | Bacteria | 808 |
| 81 | Ga0373927_0151545 | 3300035695 | Bacteria | 1518 |
| 82 | Ga0373947_0618702 | 3300035725 | Bacteria | 738 |
| 83 | Ga0373925_0355075 | 3300037068 | Bacteria | 1191 |
| 84 | Ga0395900_0534112 | 3300037418 | Bacteria | 1119 |
| 85 | Ga0395900_1063571 | 3300037418 | Bacteria | 727 |
| 86 | Ga0395898_0253273 | 3300037466 | Bacteria | 1679 |
| 87 | Ga0395905_0660705 | 3300037471 | Bacteria | 947 |
| 88 | Ga0395901_0283415 | 3300038443 | Bacteria | 1721 |
| 89 | Ga0395901_0782114 | 3300038443 | Bacteria | 945 |
| 90 | Ga0400483_067347 | 3300039062 | Bacteria | 4565 |
| 91 | Ga0400483_188908 | 3300039062 | Bacteria | 1855 |
| 92 | Ga0436361_0946646 | 3300039447 | Bacteria | 1615 |
| 93 | Ga0450898_059991 | 3300042134 | Bacteria | 747 |
| 94 | Ga0466960_0259188 | 3300044901 | Bacteria | 968 |
| 95 | Ga0495629_0670236 | 3300046459 | Bacteria | 690 |
| 96 | Ga0495638_0032279 | 3300046460 | Bacteria | 3358 |
| 97 | Ga0495672_0316826 | 3300047320 | Bacteria | 734 |
| 98 | Ga0495672_0460138 | 3300047320 | Bacteria | 572 |
| 99 | Ga0495686_0498709 | 3300047472 | Bacteria | 641 |
| 100 | Ga0496102_0327999 | 3300048905 | Bacteria | 1442 |
| 101 | Ga0496118_0315817 | 3300048921 | Bacteria | 850 |
| 102 | Ga0496119_0051278 | 3300048922 | Bacteria | 2537 |
| 103 | Ga0496120_0003258 | 3300048923 | Bacteria | 14999 |
| 104 | Ga0501031_0067451 | 3300049568 | Bacteria | 2330 |
| 105 | Ga0501032_0015889 | 3300049569 | Bacteria | 5302 |
| 106 | Ga0501033_0051138 | 3300049570 | Bacteria | 3063 |
| 107 | Ga0501033_0122912 | 3300049570 | Bacteria | 1882 |
| 108 | Ga0501034_0034706 | 3300049571 | Bacteria | 5114 |
| 109 | Ga0501034_0118115 | 3300049571 | Bacteria | 2639 |
| 110 | Ga0501036_0126074 | 3300049572 | Bacteria | 2162 |
| 111 | Ga0501036_0172915 | 3300049572 | Bacteria | 1819 |
| 112 | Ga0501036_0300077 | 3300049572 | Unclassified | 1344 |
| 113 | Ga0501037_0133941 | 3300049573 | Bacteria | 1775 |
| 114 | Ga0501038_0274486 | 3300049574 | Bacteria | 1328 |
| 115 | Ga0501039_0073051 | 3300049575 | Bacteria | 2665 |
| 116 | Ga0501042_0063655 | 3300049578 | Bacteria | 2636 |
| 117 | Ga0501043_0247564 | 3300049579 | Bacteria | 1373 |
| 118 | Ga0501046_0021916 | 3300049580 | Bacteria | 5266 |
| 119 | Ga0501046_0291039 | 3300049580 | Bacteria | 1194 |
| 120 | Ga0501047_0029550 | 3300049581 | Bacteria | 5284 |
| 121 | Ga0501047_0659260 | 3300049581 | Bacteria | 865 |
| 122 | Ga0501048_0028519 | 3300049582 | Bacteria | 4052 |
| 123 | Ga0501068_0038121 | 3300049584 | Bacteria | 2879 |
| 124 | Ga0501069_0051204 | 3300049585 | Bacteria | 2298 |
| 125 | Ga0501069_0323845 | 3300049585 | Bacteria | 906 |
| 126 | Ga0501070_0366449 | 3300049586 | Bacteria | 1168 |
| 127 | Ga0501071_0098124 | 3300049587 | Bacteria | 2158 |
| 128 | Ga0501072_0004589 | 3300049588 | Bacteria | 10516 |
| 129 | Ga0501072_0399581 | 3300049588 | Bacteria | 1090 |
| 130 | Ga0501073_0006660 | 3300049589 | Bacteria | 8605 |
| 131 | Ga0501073_0107783 | 3300049589 | Bacteria | 1933 |
| 132 | Ga0501073_0840033 | 3300049589 | Bacteria | 633 |
| 133 | Ga0501080_0059798 | 3300049742 | Bacteria | 3546 |
| 134 | Ga0501080_0253847 | 3300049742 | Bacteria | 1603 |
| 135 | Ga0501083_0008801 | 3300049744 | Bacteria | 7126 |
| 136 | Ga0501083_0566245 | 3300049744 | Bacteria | 739 |
| 137 | Ga0501035_0176187 | 3300049822 | Bacteria | 1844 |
| 138 | Ga0501044_0047341 | 3300049823 | Bacteria | 4447 |
| 139 | Ga0501044_0359805 | 3300049823 | Bacteria | 1373 |
| 140 | Ga0501044_0488270 | 3300049823 | Bacteria | 1134 |
| 141 | nmdc:mga03n38_91114_c1 | 3300050490 | Bacteria | 1452 |
| 142 | nmdc:mga0yw44_807872_c1 | 3300050492 | Unclassified | 637 |
| 143 | nmdc:mga06z11_216213_c1 | 3300050494 | Bacteria | 1118 |
| 144 | nmdc:mga04h51_5929_c1 | 3300050495 | Bacteria | 3137 |
| 145 | nmdc:mga07m45_778210_c1 | 3300050496 | Bacteria | 549 |
| 146 | nmdc:mga05p37_1139175_c1 | 3300050507 | Bacteria | 813 |
| 147 | nmdc:mga06r32_1783517_c1 | 3300050510 | Unclassified | 551 |
| 148 | nmdc:mga08y16_453336_c1 | 3300050511 | Bacteria | 1308 |
| 149 | nmdc:mga08y16_515557_c1 | 3300050511 | Bacteria | 1213 |
| 150 | nmdc:mga08y16_99866_c1 | 3300050511 | Bacteria | 3022 |
| 151 | nmdc:mga0n895_210284_c1 | 3300050512 | Bacteria | 1976 |
| 152 | nmdc:mga0n895_74619_c1 | 3300050512 | Bacteria | 3370 |
| 153 | nmdc:mga0rr50_19861_c1 | 3300050513 | Bacteria | 4546 |
| 154 | nmdc:mga0rr50_34785_c1 | 3300050513 | Bacteria | 3611 |
| 155 | nmdc:mga0rr50_465070_c1 | 3300050513 | Bacteria | 1073 |
| 156 | nmdc:mga0rr50_552565_c1 | 3300050513 | Bacteria | 980 |
| 157 | nmdc:mga0a205_1498914_c1 | 3300050515 | Unclassified | 523 |
| 158 | nmdc:mga0a205_164477_c1 | 3300050515 | Bacteria | 2115 |
| 159 | Ga0500646_0102458 | 3300053090 | Bacteria | 901 |
| 160 | Ga0500641_0114812 | 3300053096 | Bacteria | 1160 |
| 161 | Ga0500577_0235709 | 3300053142 | Bacteria | 794 |
| 162 | Ga0500627_0224899 | 3300053158 | Bacteria | 836 |
| 163 | Ga0500633_0353837 | 3300053160 | Bacteria | 535 |
| 164 | Ga0501084_0026465 | 3300054114 | Bacteria | 4840 |
| 165 | Ga0501082_0040164 | 3300060353 | Bacteria | 4036 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300014326 | Ga0157380_13284942 | Ga0157380_132849421 | 111 |
| 2 | 3300003911 | JGI25405J52794_10037414 | JGI25405J52794_100374141 | 122 |
| 3 | 3300005937 | Ga0081455_10006926 | Ga0081455_1000692613 | 122 |
| 4 | 3300049585 | Ga0501069_0323845 | Ga0501069_0323845_29_451 | 125 |
| 5 | 3300049744 | Ga0501083_0008801 | Ga0501083_0008801_6475_6897 | 125 |
| 6 | 3300060353 | Ga0501082_0040164 | Ga0501082_0040164_570_992 | 125 |
| 7 | 3300035170 | Ga0373943_0098756 | Ga0373943_0098756_1020_1439 | 126 |
| 8 | 3300035692 | Ga0373935_0596228 | Ga0373935_0596228_180_599 | 126 |
| 9 | 3300035695 | Ga0373927_0151545 | Ga0373927_0151545_986_1405 | 126 |
| 10 | 3300035725 | Ga0373947_0618702 | Ga0373947_0618702_86_505 | 126 |
| 11 | 3300037068 | Ga0373925_0355075 | Ga0373925_0355075_523_942 | 126 |
| 12 | 3300046459 | Ga0495629_0670236 | Ga0495629_0670236_258_677 | 126 |
| 13 | 3300049584 | Ga0501068_0038121 | Ga0501068_0038121_19_399 | 126 |
| 14 | 3300005471 | Ga0070698_100398293 | Ga0070698_1003982932 | 127 |
| 15 | 3300049589 | Ga0501073_0107783 | Ga0501073_0107783_451_870 | 127 |
| 16 | 3300050496 | nmdc:mga07m45_778210_c1 | nmdc:mga07m45_778210_c1_33_443 | 127 |
| 17 | 3300049587 | Ga0501071_0098124 | Ga0501071_0098124_1344_1766 | 131 |
| 18 | 3300006042 | Ga0075368_10005738 | Ga0075368_100057382 | 136 |
| 19 | 3300006048 | Ga0075363_100100883 | Ga0075363_1001008832 | 136 |
| 20 | 3300027866 | Ga0209813_10020877 | Ga0209813_100208772 | 136 |
| 21 | 3300049588 | Ga0501072_0004589 | Ga0501072_0004589_6064_6486 | 136 |
| 22 | 3300049742 | Ga0501080_0253847 | Ga0501080_0253847_577_999 | 136 |
| 23 | 3300050490 | nmdc:mga03n38_91114_c1 | nmdc:mga03n38_91114_c1_655_1131 | 136 |
| 24 | 3300050495 | nmdc:mga04h51_5929_c1 | nmdc:mga04h51_5929_c1_1730_2206 | 136 |
| 25 | 3300054114 | Ga0501084_0026465 | Ga0501084_0026465_3275_3697 | 136 |
| 26 | iso_pu_bacteria | 2513237090 | 2513608053 | 137 |
| 27 | iso_pu_bacteria | 2599185301 | 2599938594 | 137 |
| 28 | iso_pu_bacteria | 2693429783 | 2694632672 | 137 |
| 29 | iso_pu_bacteria | 2693429784 | 2694639599 | 137 |
| 30 | iso_pu_bacteria | 2857349434 | 2857354732 | 137 |
| 31 | iso_pu_bacteria | 2871495908 | 2871497419 | 137 |
| 32 | iso_pu_bacteria | 2876369609 | 2876373771 | 137 |
| 33 | iso_pu_bacteria | 2876392853 | 2876398956 | 137 |
| 34 | iso_pu_bacteria | 2878760144 | 2878761637 | 137 |
| 35 | iso_pu_bacteria | 2878767105 | 2878768604 | 137 |
| 36 | iso_pu_bacteria | 2881147464 | 2881154106 | 137 |
| 37 | iso_pu_bacteria | 2881161766 | 2881163172 | 137 |
| 38 | iso_pu_bacteria | 2885305155 | 2885312135 | 137 |
| 39 | iso_pu_bacteria | 2885326080 | 2885326786 | 137 |
| 40 | iso_pu_bacteria | 2885334103 | 2885340674 | 137 |
| 41 | iso_pu_bacteria | 2903540706 | 2903542214 | 137 |
| 42 | iso_pu_bacteria | 2904659560 | 2904665488 | 137 |
| 43 | iso_pu_bacteria | 2937994558 | 2937996067 | 137 |
| 44 | iso_pu_bacteria | 2938014810 | 2938018505 | 137 |
| 45 | iso_pu_bacteria | 2958165035 | 2958166539 | 137 |
| 46 | iso_pu_bacteria | 2961114664 | 2961120488 | 137 |
| 47 | iso_pu_bacteria | 2961163497 | 2961165004 | 137 |
| 48 | iso_pu_bacteria | 2965018300 | 2965019829 | 137 |
| 49 | iso_pu_bacteria | 2968110612 | 2968116955 | 137 |
| 50 | iso_pu_bacteria | 2968171901 | 2968173404 | 137 |
| 51 | iso_pu_bacteria | 2970554993 | 2970556493 | 137 |
| 52 | iso_pu_bacteria | 2977864932 | 2977870426 | 137 |
| 53 | iso_pu_bacteria | 2977942078 | 2977946512 | 137 |
| 54 | iso_pu_bacteria | 2987636660 | 2987643334 | 137 |
| 55 | iso_pu_bacteria | 2987659509 | 2987661011 | 137 |
| 56 | iso_pu_bacteria | 3004188549 | 3004190061 | 137 |
| 57 | iso_pu_bacteria | 3004203850 | 3004206880 | 137 |
| 58 | 3300005347 | Ga0070668_100411627 | Ga0070668_1004116272 | 138 |
| 59 | 3300005353 | Ga0070669_100505140 | Ga0070669_1005051401 | 138 |
| 60 | 3300005549 | Ga0070704_100166270 | Ga0070704_1001662703 | 138 |
| 61 | 3300005617 | Ga0068859_101454650 | Ga0068859_1014546502 | 138 |
| 62 | 3300005844 | Ga0068862_100808056 | Ga0068862_1008080561 | 138 |
| 63 | 3300006844 | Ga0075428_100042068 | Ga0075428_1000420686 | 138 |
| 64 | 3300006852 | Ga0075433_10006321 | Ga0075433_1000632114 | 138 |
| 65 | 3300006871 | Ga0075434_100000232 | Ga0075434_1000002324 | 138 |
| 66 | 3300006880 | Ga0075429_101533904 | Ga0075429_1015339042 | 138 |
| 67 | 3300006931 | Ga0097620_101454106 | Ga0097620_1014541062 | 138 |
| 68 | 3300009094 | Ga0111539_10059688 | Ga0111539_100596885 | 138 |
| 69 | 3300009094 | Ga0111539_10114813 | Ga0111539_101148132 | 138 |
| 70 | 3300009147 | Ga0114129_10081512 | Ga0114129_100815125 | 138 |
| 71 | 3300025923 | Ga0207681_10297537 | Ga0207681_102975372 | 138 |
| 72 | 3300025940 | Ga0207691_10248928 | Ga0207691_102489284 | 138 |
| 73 | 3300026116 | Ga0207674_10141196 | Ga0207674_101411965 | 138 |
| 74 | 3300027907 | Ga0207428_10440889 | Ga0207428_104408892 | 138 |
| 75 | 3300042134 | Ga0450898_059991 | Ga0450898_059991_17_433 | 138 |
| 76 | 3300047472 | Ga0495686_0498709 | Ga0495686_0498709_150_572 | 138 |
| 77 | 3300049572 | Ga0501036_0300077 | Ga0501036_0300077_825_1241 | 138 |
| 78 | 3300049585 | Ga0501069_0051204 | Ga0501069_0051204_366_782 | 138 |
| 79 | 3300050507 | nmdc:mga05p37_1139175_c1 | nmdc:mga05p37_1139175_c1_126_542 | 138 |
| 80 | 3300050510 | nmdc:mga06r32_1783517_c1 | nmdc:mga06r32_1783517_c1_30_446 | 138 |
| 81 | 3300050511 | nmdc:mga08y16_453336_c1 | nmdc:mga08y16_453336_c1_298_714 | 138 |
| 82 | 3300050511 | nmdc:mga08y16_515557_c1 | nmdc:mga08y16_515557_c1_193_609 | 138 |
| 83 | 3300050512 | nmdc:mga0n895_74619_c1 | nmdc:mga0n895_74619_c1_870_1286 | 138 |
| 84 | 3300050513 | nmdc:mga0rr50_465070_c1 | nmdc:mga0rr50_465070_c1_131_547 | 138 |
| 85 | 3300050515 | nmdc:mga0a205_1498914_c1 | nmdc:mga0a205_1498914_c1_38_454 | 138 |
| 86 | 3300005614 | Ga0068856_100653631 | Ga0068856_1006536312 | 139 |
| 87 | 3300005841 | Ga0068863_101521096 | Ga0068863_1015210962 | 139 |
| 88 | 3300006852 | Ga0075433_10172982 | Ga0075433_101729822 | 139 |
| 89 | 3300006871 | Ga0075434_100052375 | Ga0075434_1000523752 | 139 |
| 90 | 3300007076 | Ga0075435_100051662 | Ga0075435_1000516622 | 139 |
| 91 | 3300007076 | Ga0075435_100175491 | Ga0075435_1001754912 | 139 |
| 92 | 3300026088 | Ga0207641_11197147 | Ga0207641_111971472 | 139 |
| 93 | 3300034820 | Ga0373959_0063781 | Ga0373959_0063781_195_632 | 139 |
| 94 | 3300035084 | Ga0373928_0009137 | Ga0373928_0009137_803_1240 | 139 |
| 95 | 3300035085 | Ga0373929_0012245 | Ga0373929_0012245_128_565 | 139 |
| 96 | 3300035114 | Ga0373939_0012427 | Ga0373939_0012427_1133_1570 | 139 |
| 97 | 3300035121 | Ga0373960_0048956 | Ga0373960_0048956_356_793 | 139 |
| 98 | 3300035207 | Ga0373942_0010106 | Ga0373942_0010106_859_1296 | 139 |
| 99 | 3300049570 | Ga0501033_0051138 | Ga0501033_0051138_2237_2674 | 139 |
| 100 | 3300049572 | Ga0501036_0126074 | Ga0501036_0126074_856_1293 | 139 |
| 101 | 3300049580 | Ga0501046_0291039 | Ga0501046_0291039_116_553 | 139 |
| 102 | 3300049742 | Ga0501080_0059798 | Ga0501080_0059798_948_1385 | 139 |
| 103 | 3300049744 | Ga0501083_0566245 | Ga0501083_0566245_203_640 | 139 |
| 104 | 3300050511 | nmdc:mga08y16_99866_c1 | nmdc:mga08y16_99866_c1_1169_1606 | 139 |
| 105 | 3300050512 | nmdc:mga0n895_210284_c1 | nmdc:mga0n895_210284_c1_129_566 | 139 |
| 106 | 3300050513 | nmdc:mga0rr50_19861_c1 | nmdc:mga0rr50_19861_c1_3267_3704 | 139 |
| 107 | 3300050513 | nmdc:mga0rr50_34785_c1 | nmdc:mga0rr50_34785_c1_1320_1775 | 139 |
| 108 | 3300050515 | nmdc:mga0a205_164477_c1 | nmdc:mga0a205_164477_c1_219_656 | 139 |
| 109 | 3300005355 | Ga0070671_100315325 | Ga0070671_1003153252 | 140 |
| 110 | 3300005439 | Ga0070711_100663686 | Ga0070711_1006636862 | 140 |
| 111 | 3300005455 | Ga0070663_100880669 | Ga0070663_1008806691 | 140 |
| 112 | 3300005456 | Ga0070678_101691463 | Ga0070678_1016914631 | 140 |
| 113 | 3300005548 | Ga0070665_100168224 | Ga0070665_1001682243 | 140 |
| 114 | 3300006038 | Ga0075365_10229186 | Ga0075365_102291862 | 140 |
| 115 | 3300006237 | Ga0097621_100295136 | Ga0097621_1002951362 | 140 |
| 116 | 3300006358 | Ga0068871_100225323 | Ga0068871_1002253232 | 140 |
| 117 | 3300012480 | Ga0157346_1014064 | Ga0157346_10140641 | 140 |
| 118 | 3300012485 | Ga0157325_1013742 | Ga0157325_10137422 | 140 |
| 119 | 3300021361 | Ga0213872_10166263 | Ga0213872_101662632 | 140 |
| 120 | 3300025916 | Ga0207663_10733130 | Ga0207663_107331301 | 140 |
| 121 | 3300026067 | Ga0207678_10165980 | Ga0207678_101659802 | 140 |
| 122 | 3300026121 | Ga0207683_11558095 | Ga0207683_115580952 | 140 |
| 123 | 3300028379 | Ga0268266_10030376 | Ga0268266_100303762 | 140 |
| 124 | 3300034819 | Ga0373958_0117895 | Ga0373958_0117895_177_608 | 140 |
| 125 | 3300035114 | Ga0373939_0084754 | Ga0373939_0084754_481_912 | 140 |
| 126 | 3300039447 | Ga0436361_0946646 | Ga0436361_0946646_745_1173 | 140 |
| 127 | 3300046460 | Ga0495638_0032279 | Ga0495638_0032279_2616_3038 | 140 |
| 128 | 3300049571 | Ga0501034_0118115 | Ga0501034_0118115_1520_1999 | 140 |
| 129 | 3300049581 | Ga0501047_0029550 | Ga0501047_0029550_3951_4430 | 140 |
| 130 | 3300049589 | Ga0501073_0006660 | Ga0501073_0006660_7464_7943 | 140 |
| 131 | 3300049823 | Ga0501044_0047341 | Ga0501044_0047341_1429_1908 | 140 |
| 132 | 3300050513 | nmdc:mga0rr50_552565_c1 | nmdc:mga0rr50_552565_c1_52_474 | 140 |
| 133 | 3300002705 | JGI25156J39149_1012070 | JGI25156J39149_10120702 | 141 |
| 134 | 3300002741 | JGI25157J39369_1001050 | JGI25157J39369_100105014 | 141 |
| 135 | 3300003214 | JGI25165J46597_1000016 | JGI25165J46597_1000016266 | 141 |
| 136 | 3300005355 | Ga0070671_100300775 | Ga0070671_1003007752 | 141 |
| 137 | 3300005983 | Ga0081540_1005477 | Ga0081540_100547712 | 141 |
| 138 | 3300005983 | Ga0081540_1020686 | Ga0081540_10206864 | 141 |
| 139 | 3300006038 | Ga0075365_10075216 | Ga0075365_100752163 | 141 |
| 140 | 3300006058 | Ga0075432_10242721 | Ga0075432_102427211 | 141 |
| 141 | 3300006178 | Ga0075367_10246883 | Ga0075367_102468831 | 141 |
| 142 | 3300009093 | Ga0105240_10507674 | Ga0105240_105076742 | 141 |
| 143 | 3300010375 | Ga0105239_10187927 | Ga0105239_101879272 | 141 |
| 144 | 3300025250 | Ga0209026_1000005 | Ga0209026_1000005388 | 141 |
| 145 | 3300025256 | Ga0209759_1000292 | Ga0209759_100029235 | 141 |
| 146 | 3300025261 | Ga0209233_1000068 | Ga0209233_1000068268 | 141 |
| 147 | 3300025297 | Ga0209758_1003476 | Ga0209758_10034766 | 141 |
| 148 | 3300025904 | Ga0207647_10007663 | Ga0207647_100076634 | 141 |
| 149 | 3300025913 | Ga0207695_10666080 | Ga0207695_106660801 | 141 |
| 150 | 3300025914 | Ga0207671_10593039 | Ga0207671_105930392 | 141 |
| 151 | 3300025938 | Ga0207704_11668122 | Ga0207704_116681221 | 141 |
| 152 | 3300026041 | Ga0207639_10387896 | Ga0207639_103878962 | 141 |
| 153 | 3300026041 | Ga0207639_10520054 | Ga0207639_105200542 | 141 |
| 154 | 3300028794 | Ga0307515_10428849 | Ga0307515_104288492 | 141 |
| 155 | 3300031456 | Ga0307513_10109922 | Ga0307513_101099222 | 141 |
| 156 | 3300031730 | Ga0307516_10555348 | Ga0307516_105553481 | 141 |
| 157 | 3300037418 | Ga0395900_0534112 | Ga0395900_0534112_301_726 | 141 |
| 158 | 3300037418 | Ga0395900_1063571 | Ga0395900_1063571_51_476 | 141 |
| 159 | 3300037466 | Ga0395898_0253273 | Ga0395898_0253273_486_911 | 141 |
| 160 | 3300037471 | Ga0395905_0660705 | Ga0395905_0660705_421_846 | 141 |
| 161 | 3300038443 | Ga0395901_0283415 | Ga0395901_0283415_736_1161 | 141 |
| 162 | 3300038443 | Ga0395901_0782114 | Ga0395901_0782114_253_678 | 141 |
| 163 | 3300039062 | Ga0400483_067347 | Ga0400483_067347_1010_1462 | 141 |
| 164 | 3300039062 | Ga0400483_188908 | Ga0400483_188908_196_648 | 141 |
| 165 | 3300044901 | Ga0466960_0259188 | Ga0466960_0259188_412_864 | 141 |
| 166 | 3300047320 | Ga0495672_0316826 | Ga0495672_0316826_232_693 | 141 |
| 167 | 3300047320 | Ga0495672_0460138 | Ga0495672_0460138_92_517 | 141 |
| 168 | 3300048905 | Ga0496102_0327999 | Ga0496102_0327999_632_1060 | 141 |
| 169 | 3300048921 | Ga0496118_0315817 | Ga0496118_0315817_215_643 | 141 |
| 170 | 3300048922 | Ga0496119_0051278 | Ga0496119_0051278_988_1413 | 141 |
| 171 | 3300048923 | Ga0496120_0003258 | Ga0496120_0003258_1964_2389 | 141 |
| 172 | 3300049568 | Ga0501031_0067451 | Ga0501031_0067451_11_472 | 141 |
| 173 | 3300049569 | Ga0501032_0015889 | Ga0501032_0015889_4289_4750 | 141 |
| 174 | 3300049570 | Ga0501033_0122912 | Ga0501033_0122912_1008_1469 | 141 |
| 175 | 3300049571 | Ga0501034_0034706 | Ga0501034_0034706_4339_4800 | 141 |
| 176 | 3300049572 | Ga0501036_0172915 | Ga0501036_0172915_244_705 | 141 |
| 177 | 3300049573 | Ga0501037_0133941 | Ga0501037_0133941_901_1362 | 141 |
| 178 | 3300049574 | Ga0501038_0274486 | Ga0501038_0274486_315_776 | 141 |
| 179 | 3300049575 | Ga0501039_0073051 | Ga0501039_0073051_1136_1597 | 141 |
| 180 | 3300049578 | Ga0501042_0063655 | Ga0501042_0063655_357_818 | 141 |
| 181 | 3300049579 | Ga0501043_0247564 | Ga0501043_0247564_598_1059 | 141 |
| 182 | 3300049580 | Ga0501046_0021916 | Ga0501046_0021916_4115_4576 | 141 |
| 183 | 3300049581 | Ga0501047_0659260 | Ga0501047_0659260_223_684 | 141 |
| 184 | 3300049582 | Ga0501048_0028519 | Ga0501048_0028519_1806_2267 | 141 |
| 185 | 3300049586 | Ga0501070_0366449 | Ga0501070_0366449_604_1065 | 141 |
| 186 | 3300049588 | Ga0501072_0399581 | Ga0501072_0399581_149_610 | 141 |
| 187 | 3300049589 | Ga0501073_0840033 | Ga0501073_0840033_170_595 | 141 |
| 188 | 3300049822 | Ga0501035_0176187 | Ga0501035_0176187_1069_1530 | 141 |
| 189 | 3300049823 | Ga0501044_0359805 | Ga0501044_0359805_598_1059 | 141 |
| 190 | 3300049823 | Ga0501044_0488270 | Ga0501044_0488270_325_756 | 141 |
| 191 | 3300050492 | nmdc:mga0yw44_807872_c1 | nmdc:mga0yw44_807872_c1_202_627 | 141 |
| 192 | 3300050494 | nmdc:mga06z11_216213_c1 | nmdc:mga06z11_216213_c1_145_606 | 141 |
| 193 | 3300053090 | Ga0500646_0102458 | Ga0500646_0102458_429_890 | 141 |
| 194 | 3300053096 | Ga0500641_0114812 | Ga0500641_0114812_45_506 | 141 |
| 195 | 3300053142 | Ga0500577_0235709 | Ga0500577_0235709_17_478 | 141 |
| 196 | 3300053158 | Ga0500627_0224899 | Ga0500627_0224899_53_478 | 141 |
| 197 | 3300053160 | Ga0500633_0353837 | Ga0500633_0353837_47_508 | 141 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7qnt-assembly1.cif.gz_AAA | tarm(se) native | 0.7375 | 61 | 95 |
| 3fac-assembly8.cif.gz_H | crystal structure of rhodobacter sphaeroides protein rsp_2168. northeast structural genomics target rhr83. | 0.7241 | 5 | 113 |
| 3fac-assembly8.cif.gz_H | crystal structure of rhodobacter sphaeroides protein rsp_2168. northeast structural genomics target rhr83. | 0.713 | 5 | 113 |
| 4x7r-assembly1.cif.gz_A | crystal structure of s. aureus tarm g117r mutant in complex with fondaparinux, alpha-glcnac-glycerol and udp | 0.7079 | 59 | 95 |
| 8ajq-assembly3.cif.gz_E | crystal structure of pa2722 from pseudomonas aeruginosa pao1 | 0.6754 | 1 | 112 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q54X87_13_141_2.170.150.70 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; | 0.8089 | 5 | 116 | 2.170.150.70 |
| af_A0A0P0W298_97_213_3.40.420.10 | Alpha Beta;3-Layer(aba) Sandwich;Ricin (A subunit); domain 1;Ricin (A subunit), domain 1 | 0.7783 | 57 | 85 | 3.40.420.10 |
| af_Q54VC9_11_133_2.170.150.70 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; | 0.7432 | 6 | 121 | 2.170.150.70 |
| 3facD00 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; | 0.7265 | 5 | 115 | 2.170.150.70 |
| af_A0A1D6EPM0_14_114_2.170.150.70 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; | 0.7177 | 5 | 103 | 2.170.150.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A503WTW0-F1-model_v4 | CENP-V/GFA domain-containing protein | 0.992 | 1 | 141 |
GO:0016846
GO:0046872 |
| AF-A0A0Q8LAF1-F1-model_v4 | CENP-V/GFA domain-containing protein | 0.9843 | 1 | 141 |
GO:0016846
GO:0046872 |
| AF-A0A843RGL9-F1-model_v4 | CENP-V/GFA domain-containing protein | 0.9808 | 2 | 141 |
GO:0016846
GO:0046872 |
| AF-A0A7R7AWC5-F1-model_v4 | Aldehyde-activating protein | 0.9791 | 1 | 141 |
GO:0016846
GO:0046872 |
| AF-A0A503WTW0-F1-model_v4 | CENP-V/GFA domain-containing protein | 0.9781 | 1 | 141 |
GO:0016846
GO:0046872 |
Predicted Structure (AlphaFold2)
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