F304162

General Info

Members Datasets Scaffolds Average Seq Length
198 139 396 938

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100001276|Ga0068852_1000012769
Length 1002
Sequence MILPFPILPDRGRRQEDNAAAVRLRIRDCPRLRNELRPLPTFGLEAVHSASDGIVADVDIGPVGERLSFGPFCLAPGERLLTKDGQPVEIGGRAFDLLVALTDQPGRILSKRELLKRVWPDVVVEDGSLRFHMAGLRRLLGDGQDGARYIATQVGVGYAFVAAIERSGPASPATSRLLAPAAGTTNLPARLPHLIGRDQDVELLVNRVVSAPLFTIVGPAGVGKTSLAIEIGHRLCERFDGQVTFVDFSMIENAGLVPAMLAGAMGIAVQTDDPTAVVLGHLREKRILLILDNCEHVIEPVAAIVERVVDQAPDARIIATSREPLRVRSEHVHRLDALAFPTDPAGRTVQELLAYPAVELFCERAAAADSSLILDEDAVRAIADMCRRLDGMALPIELAAVQVATHGIAATTRQLGERFSLGWSGRRTAQPRQQTLQAALDWSYDLLSDVERITLERLAIFVGPFSIDAALEVATEAEIGADAVAATLDSLAAKSLIASDRSQRTGTYRLLEMTRAYARDKLLGRGSGRYHAVARRHAAFFLTELEGVAGRDEDLLRDIRALRLQLGNIRSALAWSFGDDGDRRIAVRLAAASTPVFLTLSHMIECRTWCQRAVEMIDERHRGTAIELELQASLGIALMFTRGNSEAAGGALSRALEVATLLDDRANQLRMLALLHIFHERIGDYDVALAHAERAVQIAEAMGEGEALGVAYSLSGISHHLAGDQARARQDLESALRHSPPSQRSRTIHYGFDHRNRAGIGLARALWLSGSPQEADRVARETVAEAGRLDHPVTRCIALIWSLTVRLWMGDLDKAEEELRAFSHCAEVNAFGPYIAAAAGLRAELAIGRGRTEGAVVALQESIARLKAARYDLQTTTFSIALARGLILEGRDREAIALVDETIARCDANDERFATPELLRIKADILRRTGDNLAARDLLGQALGLARGQGARAWELRAGIDLAALLSGMERTEEARALLAQVTADFPDEGVSAAGLSPDPGS

Samples

Sample ID Description Type Environment
1 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
29 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
30 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
31 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
32 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
33 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
35 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
36 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
42 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
58 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
59 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
60 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
61 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
62 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
63 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
64 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
65 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
66 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
67 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
68 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
69 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
70 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
71 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
72 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
73 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
74 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
75 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
76 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
77 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
78 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
79 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
80 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
81 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
82 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
83 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
84 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
85 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
92 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
93 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
94 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
95 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
96 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
97 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
98 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
99 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
100 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
101 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
102 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
103 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
104 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
105 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
106 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
107 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
108 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
109 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
110 2508501050 Microvirga lupini Lut6 Isolate Nodule
111 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
112 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
113 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
114 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
115 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
116 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
117 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
118 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
119 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
120 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
121 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
122 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
123 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
124 2643221583 Caulobacter sp. Root655 Isolate Unclassified
125 2643221618 Ensifer sp. Root231 Isolate Unclassified
126 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
127 2643221655 Ensifer sp. Root1252 Isolate Unclassified
128 2643221659 Ensifer sp. Root127 Isolate Unclassified
129 2643221698 Ensifer sp. Root142 Isolate Unclassified
130 2643221712 Ensifer sp. Root258 Isolate Unclassified
131 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
132 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
133 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
134 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
135 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
136 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
137 2996887358 Rhizobium sp. R711 Isolate Nodule
138 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
139 8005321885 Rhizobium sp. R72 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.85
Metatranscriptomes 0
Isolates 15.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 34.34
Nodule 4.55
Rhizoplane 5.05
Rhizosphere 34.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068852_100001276 3300005616 Bacteria 16811
2 JGI25158J39367_1001774 3300002739 Bacteria 3680
3 JGI25150J39212_1000444 3300002774 Bacteria 18413
4 JGI25159J45721_1001393 3300002987 Bacteria 10033
5 JGI25159J45721_1003159 3300002987 Bacteria 5926
6 JGI25153J46596_10000029 3300003215 Bacteria 201658
7 JGI25153J46596_10000172 3300003215 Bacteria 64551
8 JGI25153J46596_10001661 3300003215 Bacteria 13191
9 rootH1_10062437 3300003316 Bacteria 4270
10 rootL2_10072848 3300003322 Bacteria 5718
11 rootL2_10127843 3300003322 Bacteria 7832
12 JGI25160J50197_1000078 3300003354 Bacteria 102092
13 JGI25161J50226_1000059 3300003374 Bacteria 102092
14 JGI25161J50226_1003377 3300003374 Bacteria 3680
15 Ga0055526_1005657 3300003771 Bacteria 7104
16 Ga0055526_1009768 3300003771 Bacteria 4562
17 Ga0055537_1001292 3300003773 Bacteria 10370
18 Ga0055537_1005571 3300003773 Bacteria 3357
19 Ga0055524_1000416 3300003775 Bacteria 35958
20 Ga0055524_1007370 3300003775 Bacteria 4679
21 Ga0055528_1005517 3300003790 Bacteria 5872
22 Ga0055530_10000144 3300003791 Bacteria 63595
23 Ga0055531_10010743 3300003794 Bacteria 4510
24 Ga0055543_1000058 3300004625 Bacteria 102130
25 Ga0055543_1000793 3300004625 Bacteria 15621
26 Ga0065165_1000044 3300005262 Bacteria 203774
27 Ga0065165_1000400 3300005262 Bacteria 69947
28 Ga0065165_1000597 3300005262 Bacteria 52857
29 Ga0065165_1003147 3300005262 Bacteria 12178
30 Ga0065165_1004439 3300005262 Bacteria 8701
31 Ga0070667_100001310 3300005367 Bacteria 22379
32 Ga0068863_100010566 3300005841 Bacteria 8963
33 Ga0081539_10020547 3300005985 Bacteria 4457
34 Ga0075370_10007255 3300006353 Bacteria 5640
35 Ga0099795_10000736 3300007788 Bacteria 6395
36 Ga0105240_10001626 3300009093 Bacteria 38125
37 Ga0105237_10003557 3300009545 Bacteria 18468
38 Ga0105239_10005751 3300010375 Bacteria 14465
39 Ga0157370_10000305 3300013104 Bacteria 61632
40 Ga0157369_10023534 3300013105 Bacteria 6861
41 Ga0182005_1002544 3300015265 Bacteria 6475
42 Ga0213872_10010132 3300021361 Bacteria 4495
43 Ga0209436_100059 3300025208 Bacteria 60623
44 Ga0209436_101259 3300025208 Bacteria 9099
45 Ga0209437_101491 3300025233 Bacteria 5594
46 Ga0207425_1000020 3300025245 Bacteria 372623
47 Ga0207425_1005648 3300025245 Bacteria 3534
48 Ga0209677_100252 3300025253 Bacteria 36555
49 Ga0209129_1000668 3300025258 Bacteria 22730
50 Ga0209233_1000139 3300025261 Bacteria 197070
51 Ga0209565_1000010 3300025263 Bacteria 687724
52 Ga0209565_1000054 3300025263 Bacteria 206016
53 Ga0209673_1001509 3300025273 Bacteria 21455
54 Ga0209673_1006325 3300025273 Bacteria 5746
55 Ga0209130_1000004 3300025284 Bacteria 633436
56 Ga0209130_1000089 3300025284 Bacteria 152711
57 Ga0209130_1000774 3300025284 Bacteria 27614
58 Ga0209025_1000383 3300025294 Bacteria 91739
59 Ga0209564_1000650 3300025295 Bacteria 52044
60 Ga0209758_1000004 3300025297 Bacteria 1375322
61 Ga0209758_1000007 3300025297 Bacteria 1270410
62 Ga0209758_1002487 3300025297 Bacteria 18731
63 Ga0209758_1006789 3300025297 Bacteria 8035
64 Ga0209758_1016124 3300025297 Bacteria 3813
65 Ga0209050_1000001 3300025298 Bacteria 3563507
66 Ga0209256_1000293 3300025299 Bacteria 87792
67 Ga0209256_1002600 3300025299 Bacteria 14327
68 Ga0209256_1008403 3300025299 Bacteria 4801
69 Ga0207426_1000003 3300025302 Bacteria 1063212
70 Ga0207426_1000083 3300025302 Bacteria 298770
71 Ga0209051_1000632 3300025303 Bacteria 40460
72 Ga0209257_1001505 3300025304 Bacteria 27373
73 Ga0209257_1006313 3300025304 Bacteria 7724
74 Ga0209257_1007476 3300025304 Bacteria 6582
75 Ga0207647_10004578 3300025904 Bacteria 10245
76 Ga0207647_10023095 3300025904 Bacteria 4118
77 Ga0207695_10000423 3300025913 Bacteria 93807
78 Ga0207671_10000148 3300025914 Bacteria 108473
79 Ga0207706_10006154 3300025933 Bacteria 11146
80 Ga0207706_10050645 3300025933 Bacteria 3669
81 Ga0207658_10000923 3300025986 Bacteria 24293
82 Ga0207641_10001202 3300026088 Bacteria 25928
83 Ga0307515_10053165 3300028794 Bacteria 5984
84 Ga0307409_100001386 3300031995 Bacteria 11837
85 Ga0395899_0040968 3300037312 Bacteria 3463
86 Ga0395900_0028173 3300037418 Bacteria 5753
87 Ga0395905_0038110 3300037471 Bacteria 4510
88 Ga0436361_0500587 3300039447 Bacteria 8872
89 Ga0439458_0003279 3300042157 Bacteria 3817
90 Ga0466968_0000067 3300044735 Bacteria 31145
91 Ga0495627_000282 3300046453 Bacteria 51175
92 Ga0495638_0001434 3300046460 Bacteria 21592
93 Ga0495596_0000689 3300046500 Bacteria 20976
94 Ga0495607_0001752 3300046501 Bacteria 18565
95 Ga0495583_0006938 3300046506 Bacteria 7268
96 Ga0495583_0008185 3300046506 Bacteria 6426
97 Ga0495583_0009499 3300046506 Bacteria 5800
98 Ga0495616_0007677 3300046513 Bacteria 6449
99 Ga0495620_0001425 3300046515 Bacteria 14328
100 Ga0495620_0002169 3300046515 Bacteria 11407
101 Ga0495632_0000307 3300046519 Bacteria 47308
102 Ga0495643_0002154 3300046522 Bacteria 16182
103 Ga0495648_0000088 3300046524 Bacteria 115109
104 Ga0495663_0001368 3300046525 Bacteria 7683
105 Ga0495597_0006021 3300046542 Bacteria 6323
106 Ga0495622_0000002 3300046557 Bacteria 321742
107 Ga0495622_0004589 3300046557 Bacteria 6398
108 Ga0495668_0000109 3300046616 Bacteria 132453
109 Ga0495625_0000092 3300046660 Bacteria 146172
110 Ga0495625_0009659 3300046660 Bacteria 8042
111 Ga0495669_0000100 3300046684 Bacteria 53888
112 Ga0495649_0037631 3300046694 Bacteria 2655
113 Ga0495660_0017372 3300046810 Bacteria 4143
114 Ga0495672_0011577 3300047320 Bacteria 6217
115 Ga0495683_0000551 3300047323 Bacteria 28443
116 Ga0495683_0021088 3300047323 Bacteria 3358
117 Ga0495687_001714 3300047443 Bacteria 19419
118 Ga0495687_001843 3300047443 Bacteria 18548
119 Ga0495673_0000273 3300047469 Bacteria 70294
120 Ga0495673_0001124 3300047469 Bacteria 22921
121 Ga0495681_0012392 3300047470 Bacteria 5013
122 Ga0495626_0000796 3300048091 Bacteria 28573
123 Ga0496100_0020086 3300048903 Bacteria 3999
124 Ga0496102_0000066 3300048905 Bacteria 159020
125 Ga0496102_0014390 3300048905 Bacteria 6874
126 Ga0496103_0000102 3300048906 Bacteria 93559
127 Ga0496103_0011796 3300048906 Bacteria 5184
128 Ga0496105_0003603 3300048908 Bacteria 11497
129 Ga0496111_0000770 3300048914 Bacteria 17117
130 Ga0496115_0000054 3300048918 Bacteria 106423
131 Ga0496116_0000981 3300048919 Bacteria 35058
132 Ga0496116_0031438 3300048919 Bacteria 3800
133 Ga0496117_0000225 3300048920 Bacteria 106485
134 Ga0496117_0005791 3300048920 Bacteria 12825
135 Ga0496118_0000197 3300048921 Bacteria 106272
136 Ga0496118_0003555 3300048921 Bacteria 19454
137 Ga0496118_0011131 3300048921 Bacteria 8818
138 Ga0496119_0004499 3300048922 Bacteria 13849
139 Ga0496120_0002485 3300048923 Bacteria 18548
140 Ga0496120_0011999 3300048923 Bacteria 5922
141 Ga0496121_0000279 3300048924 Bacteria 106475
142 Ga0496121_0002069 3300048924 Bacteria 31763
143 Ga0496121_0012213 3300048924 Bacteria 9411
144 Ga0496121_0016206 3300048924 Bacteria 7712
145 Ga0496121_0019021 3300048924 Bacteria 6890
146 Ga0496121_0021820 3300048924 Bacteria 6253
147 Ga0496122_0001427 3300048925 Bacteria 38717
148 Ga0496122_0005061 3300048925 Bacteria 15924
149 Ga0496122_0025983 3300048925 Bacteria 5067
150 Ga0496123_0000934 3300048926 Bacteria 45665
151 Ga0496123_0002152 3300048926 Bacteria 25168
152 Ga0496123_0016000 3300048926 Bacteria 6116
153 Ga0496124_0000240 3300048927 Bacteria 106486
154 Ga0496124_0003435 3300048927 Bacteria 19397
155 Ga0496124_0079638 3300048927 Bacteria 2697
156 Ga0496125_0000229 3300048928 Bacteria 114537
157 Ga0496125_0002427 3300048928 Bacteria 24245
158 Ga0496125_0005882 3300048928 Bacteria 13457
159 Ga0496126_0000295 3300048929 Bacteria 106266
160 Ga0500610_0000122 3300053079 Bacteria 23543
161 Ga0500554_003114 3300053102 Bacteria 3351
162 Ga0500595_000554 3300053119 Bacteria 22372
163 Ga0500595_001610 3300053119 Bacteria 11893
164 Ga0500618_002320 3300053125 Bacteria 7299
165 Ga0500642_0000349 3300053130 Bacteria 15623
166 Ga0500586_000341 3300053145 Bacteria 9236
167 Ga0500616_0019476 3300053153 Bacteria 3824
168 Ga0500622_0001294 3300053156 Bacteria 20360
169 2508728125 2508501050 Bacteria 9633614
170 2510841160 2510461069 Bacteria 5505000
171 2511124245 2510917020 Bacteria 5657507
172 2513894279 2513237141 Bacteria 8496279
173 2513999780 2513237159 Bacteria 6810126
174 2585267567 2582581306 Bacteria 6450535
175 2585282536 2582581308 Bacteria 7413247
176 2585386627 2582581865 Bacteria 6644329
177 2585399479 2582581867 Bacteria 7184437
178 2585536232 2585427527 Bacteria 7273426
179 2585557522 2585427530 Bacteria 7383882
180 2599940064 2599185301 Bacteria 6161860
181 2600203485 2599185354 Bacteria 4398675
182 2616311647 2615840626 Bacteria 7921970
183 2643923820 2643221583 Bacteria 5218014
184 2644104941 2643221618 Bacteria 7717186
185 2644203879 2643221636 Bacteria 6583769
186 2644307483 2643221655 Bacteria 7722067
187 2644333912 2643221659 Bacteria 7890716
188 2644541482 2643221698 Bacteria 7756764
189 2644613567 2643221712 Bacteria 7729434
190 2819642042 2818991453 Bacteria 7181617
191 2842333352 2842333319 Bacteria 8899485
192 2842526352 2842521101 Bacteria 6569494
193 2844536103 2844533157 Bacteria 7517899
194 2874126889 2874123672 Bacteria 7238285
195 2919103966 2919100787 Bacteria 7710546
196 2996890959 2996887358 Bacteria 5795980
197 3005457962 3005452660 Bacteria 5889319
198 8005325486 8005321885 Bacteria 5795980
199 Ga0068852_100001276
200 JGI25158J39367_1001774
201 JGI25150J39212_1000444
202 JGI25159J45721_1001393
203 JGI25159J45721_1003159
204 JGI25153J46596_10000029
205 JGI25153J46596_10000172
206 JGI25153J46596_10001661
207 rootH1_10062437
208 rootL2_10072848
209 rootL2_10127843
210 JGI25160J50197_1000078
211 JGI25161J50226_1000059
212 JGI25161J50226_1003377
213 Ga0055526_1005657
214 Ga0055526_1009768
215 Ga0055537_1001292
216 Ga0055537_1005571
217 Ga0055524_1000416
218 Ga0055524_1007370
219 Ga0055528_1005517
220 Ga0055530_10000144
221 Ga0055531_10010743
222 Ga0055543_1000058
223 Ga0055543_1000793
224 Ga0065165_1000044
225 Ga0065165_1000400
226 Ga0065165_1000597
227 Ga0065165_1003147
228 Ga0065165_1004439
229 Ga0070667_100001310
230 Ga0068863_100010566
231 Ga0081539_10020547
232 Ga0075370_10007255
233 Ga0099795_10000736
234 Ga0105240_10001626
235 Ga0105237_10003557
236 Ga0105239_10005751
237 Ga0157370_10000305
238 Ga0157369_10023534
239 Ga0182005_1002544
240 Ga0213872_10010132
241 Ga0209436_100059
242 Ga0209436_101259
243 Ga0209437_101491
244 Ga0207425_1000020
245 Ga0207425_1005648
246 Ga0209677_100252
247 Ga0209129_1000668
248 Ga0209233_1000139
249 Ga0209565_1000010
250 Ga0209565_1000054
251 Ga0209673_1001509
252 Ga0209673_1006325
253 Ga0209130_1000004
254 Ga0209130_1000089
255 Ga0209130_1000774
256 Ga0209025_1000383
257 Ga0209564_1000650
258 Ga0209758_1000004
259 Ga0209758_1000007
260 Ga0209758_1002487
261 Ga0209758_1006789
262 Ga0209758_1016124
263 Ga0209050_1000001
264 Ga0209256_1000293
265 Ga0209256_1002600
266 Ga0209256_1008403
267 Ga0207426_1000003
268 Ga0207426_1000083
269 Ga0209051_1000632
270 Ga0209257_1001505
271 Ga0209257_1006313
272 Ga0209257_1007476
273 Ga0207647_10004578
274 Ga0207647_10023095
275 Ga0207695_10000423
276 Ga0207671_10000148
277 Ga0207706_10006154
278 Ga0207706_10050645
279 Ga0207658_10000923
280 Ga0207641_10001202
281 Ga0307515_10053165
282 Ga0307409_100001386
283 Ga0395899_0040968
284 Ga0395900_0028173
285 Ga0395905_0038110
286 Ga0436361_0500587
287 Ga0439458_0003279
288 Ga0466968_0000067
289 Ga0495627_000282
290 Ga0495638_0001434
291 Ga0495596_0000689
292 Ga0495607_0001752
293 Ga0495583_0006938
294 Ga0495583_0008185
295 Ga0495583_0009499
296 Ga0495616_0007677
297 Ga0495620_0001425
298 Ga0495620_0002169
299 Ga0495632_0000307
300 Ga0495643_0002154
301 Ga0495648_0000088
302 Ga0495663_0001368
303 Ga0495597_0006021
304 Ga0495622_0000002
305 Ga0495622_0004589
306 Ga0495668_0000109
307 Ga0495625_0000092
308 Ga0495625_0009659
309 Ga0495669_0000100
310 Ga0495649_0037631
311 Ga0495660_0017372
312 Ga0495672_0011577
313 Ga0495683_0000551
314 Ga0495683_0021088
315 Ga0495687_001714
316 Ga0495687_001843
317 Ga0495673_0000273
318 Ga0495673_0001124
319 Ga0495681_0012392
320 Ga0495626_0000796
321 Ga0496100_0020086
322 Ga0496102_0000066
323 Ga0496102_0014390
324 Ga0496103_0000102
325 Ga0496103_0011796
326 Ga0496105_0003603
327 Ga0496111_0000770
328 Ga0496115_0000054
329 Ga0496116_0000981
330 Ga0496116_0031438
331 Ga0496117_0000225
332 Ga0496117_0005791
333 Ga0496118_0000197
334 Ga0496118_0003555
335 Ga0496118_0011131
336 Ga0496119_0004499
337 Ga0496120_0002485
338 Ga0496120_0011999
339 Ga0496121_0000279
340 Ga0496121_0002069
341 Ga0496121_0012213
342 Ga0496121_0016206
343 Ga0496121_0019021
344 Ga0496121_0021820
345 Ga0496122_0001427
346 Ga0496122_0005061
347 Ga0496122_0025983
348 Ga0496123_0000934
349 Ga0496123_0002152
350 Ga0496123_0016000
351 Ga0496124_0000240
352 Ga0496124_0003435
353 Ga0496124_0079638
354 Ga0496125_0000229
355 Ga0496125_0002427
356 Ga0496125_0005882
357 Ga0496126_0000295
358 Ga0500610_0000122
359 Ga0500554_003114
360 Ga0500595_000554
361 Ga0500595_001610
362 Ga0500618_002320
363 Ga0500642_0000349
364 Ga0500586_000341
365 Ga0500616_0019476
366 Ga0500622_0001294
367 2508728125
368 2510841160
369 2511124245
370 2513894279
371 2513999780
372 2585267567
373 2585282536
374 2585386627
375 2585399479
376 2585536232
377 2585557522
378 2599940064
379 2600203485
380 2616311647
381 2643923820
382 2644104941
383 2644203879
384 2644307483
385 2644333912
386 2644541482
387 2644613567
388 2819642042
389 2842333352
390 2842526352
391 2844536103
392 2874126889
393 2919103966
394 2996890959
395 3005457962
396 8005325486

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lxl-assembly1.cif.gz_A crystal structure of c-terminal dna-binding domain of escherichia coli ompr 0.9197 13 108
6zwt-assembly1.cif.gz_C crystal structure of dna-binding domain of ompr of two-component system of acinetobacter baumannii 0.9129 14 106
6zwt-assembly2.cif.gz_D crystal structure of dna-binding domain of ompr of two-component system of acinetobacter baumannii 0.9111 14 106
5za3-assembly1.cif.gz_B structure of a c-terminal s. mutans response regulator vicr domain 0.9091 11 106
4ixa-assembly2.cif.gz_B structure of dna-binding domain of the response regulator saer from staphylococcus epidermidis 0.9049 13 108
ID Description Score Start End Superfamily
af_P9WMG1_1_124_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9483 149 271 3.40.50.300
af_P9WKP9_25_177_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9326 127 271 3.40.50.300
af_P9WMG1_1_124_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9262 149 271 3.40.50.300
af_Q11028_253_403_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9231 128 271 3.40.50.300
af_Q2G2U6_122_233_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9077 13 106 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3S1VKS3-F1-model_v4 deleted 0.9628 13 99
AF-A0A7V3BS33-F1-model_v4 MalT-like TPR region domain-containing protein 0.9273 716 950
AF-A0A531KMG6-F1-model_v4 deleted 0.9239 666 949
AF-A0A535P0S1-F1-model_v4 Adenylate/guanylate cyclase domain-containing protein 0.9203 127 320 GO:0004016
GO:0009190
GO:0035556
GO:0043531
AF-A0A2V7XTA5-F1-model_v4 FHA domain-containing protein 0.9161 11 117 GO:0000160
GO:0003677
GO:0006355

Map