F306147
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 199 | 160 | 399 | 498 |
Family's Representative Sequence
| Representative Sequence | 3300044684|Ga0466966_0004596|Ga0466966_0004596_3699_5414 |
| Length | 571 |
| Sequence | MFAIILLRTSGDTVSIRQPFHGTIPPHFGAGGKKIPGGVARTGFRVKIGATEAVKRSMNDSTVTRLNPALVERKRARIVGGHPARTLDLFAGCGGLSLGFDAAGFKSIGAVEFDPDAARSHALNFMGDLPRALFEAHAAAKDITKIEPQDLLRTFQLDGPVEDQVDVIVGGPPCQAFARVGRAKLREVADHPEAFLQDPRGNLYLRYLHYVNVLKPIALLMENVPDVLNYGGHNIAEETCELLTEMGYRCGYTLLNSVYFGVPQMRERMFLVAIASEIASEITFPSPTHWIEMPRGYEGTRQVALQTVKRDLFGEDIYFVTPSPADASKCAPAVTAEQALGDLPRITAHLEGKLKKGARRFDTLVPYGTATEDLSTYAKLMRSWPGFENDEGVKDHVIRYLPRDYAIFERMAPGDQYPEAHQHALALFEERIAALRARKKKPLGPRSREYQALWDATVPPYDASKFPNKWRKMERDAPARTLMAHLGKDSYSHIHYDSTQARTISVREAARLQSFPDGFVLSGSMNPAFKQIGNAVPPLLAKAVASHMLKMIKPAEEERAHESKNPAETVS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 2 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 3 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 4 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 5 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 6 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 7 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 9 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 10 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 11 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 12 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 13 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 14 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 21 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 24 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 26 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 27 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 28 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 30 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 31 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 32 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300012498 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410 | Metagenome | Rhizosphere |
| 40 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 44 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 45 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 46 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 47 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 49 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 50 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 51 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 53 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 55 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300027666 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) | Metagenome | Nodule |
| 69 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 70 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 73 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 74 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 75 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 76 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 77 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 78 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 79 | 3300042013 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 | Metagenome | Rhizosphere |
| 80 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 81 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 82 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 83 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 84 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 85 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 86 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 87 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 88 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 110 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 111 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 112 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 113 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 114 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 115 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 116 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 117 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 118 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 119 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 120 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300049764 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control | Metagenome | Rhizosphere |
| 123 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 126 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 128 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 129 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 130 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 131 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 132 | 2511231019 | Pseudomonas sp. GM67 | Isolate | Nodule |
| 133 | 2513237086 | Sinorhizobium meliloti MVII-I | Isolate | Nodule |
| 134 | 2600255279 | Rhizobium sp. NFIX01 | Isolate | Rhizoplane |
| 135 | 2600255308 | Rhizobium sp. NFIX02 | Isolate | Rhizoplane |
| 136 | 2643221541 | Sphingomonas sp. Root50 | Isolate | Unclassified |
| 137 | 2643221573 | Lysobacter sp. Root604 | Isolate | Unclassified |
| 138 | 2643221599 | Rhizobium sp. Root708 | Isolate | Unclassified |
| 139 | 2643221606 | Sphingomonas sp. Root720 | Isolate | Unclassified |
| 140 | 2643221671 | Sphingomonas sp. Root1294 | Isolate | Unclassified |
| 141 | 2775506901 | Microvirga ossetica V5/3m | Isolate | Unclassified |
| 142 | 2791355123 | Mesorhizobium sophorae ICMP 19535 | Isolate | Unclassified |
| 143 | 2791355264 | Rhizobium sp. S9 | Isolate | Nodule |
| 144 | 2791355265 | Rhizobium sp. H4 | Isolate | Nodule |
| 145 | 2841734538 | Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 | Isolate | Nodule |
| 146 | 2842775625 | Roseomonas sp. R-71825 | Isolate | Unclassified |
| 147 | 2856342000 | Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 | Isolate | Nodule |
| 148 | 2871435913 | Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 | Isolate | Nodule |
| 149 | 2909399089 | Nguyenibacter vanlangensis LMG 31431 | Isolate | Unclassified |
| 150 | 2937016420 | Sinorhizobium meliloti USDA1027 | Isolate | Nodule |
| 151 | 2939674588 | Arthrobacter bambusae 3552 | Isolate | Rhizosphere |
| 152 | 2957484790 | Sinorhizobium meliloti USDA1464 | Isolate | Nodule |
| 153 | 2974307012 | Stenotrophomonas sp. SORGH_AS_0282 | Isolate | Unclassified |
| 154 | 2984514374 | Stenotrophomonas sp. SORGH_AS282 | Isolate | Aerial Root |
| 155 | 2996386984 | Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 | Isolate | Nodule |
| 156 | 3003930520 | Sinorhizobium sp. BG8 | Isolate | Unclassified |
| 157 | 8001845381 | Ancylobacter sonchi VKM B-3145 | Isolate | Unclassified |
| 158 | 8005682033 | Rhizobium dioscoreae S-93 | Isolate | Unclassified |
| 159 | 8018127388 | Rhizobium aegyptiacum 950 | Isolate | Nodule |
| 160 | 8056148874 | Pseudomonas khavaziana SWRI124 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.43 |
| Metatranscriptomes | 0 |
| Isolates | 14.57 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.5 |
| Bulb | 0 |
| Endosphere | 17.09 |
| Nodule | 6.53 |
| Rhizoplane | 2.01 |
| Rhizosphere | 57.79 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.01 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0466966_0004596 | 3300044684 | Bacteria | 9093 |
| 2 | SwRhRL2b_contig_796017 | 2162886007 | Bacteria | 5502 |
| 3 | JGI24739J22299_10000412 | 3300001989 | Bacteria | 14771 |
| 4 | rootH1_10000282 | 3300003316 | Bacteria | 1223 |
| 5 | rootH1_10000282 | 3300003323 | Bacteria | 25914 |
| 6 | rootH1_10020809 | 3300003323 | Bacteria | 47178 |
| 7 | rootH1_10064175 | 3300003323 | Bacteria | 9117 |
| 8 | Ga0055526_1000015 | 3300003771 | Bacteria | 226543 |
| 9 | Ga0055537_1000053 | 3300003773 | Bacteria | 82599 |
| 10 | Ga0055524_1000059 | 3300003775 | Bacteria | 138562 |
| 11 | Ga0055524_1002695 | 3300003775 | Bacteria | 8984 |
| 12 | Ga0055536_1000017 | 3300003781 | Bacteria | 221741 |
| 13 | Ga0055534_1000017 | 3300003784 | Bacteria | 138670 |
| 14 | Ga0055528_1000008 | 3300003790 | Bacteria | 226543 |
| 15 | Ga0055528_1000041 | 3300003790 | Bacteria | 111560 |
| 16 | Ga0055530_10000032 | 3300003791 | Bacteria | 121590 |
| 17 | Ga0055530_10000876 | 3300003791 | Bacteria | 24743 |
| 18 | Ga0055531_10001218 | 3300003794 | Bacteria | 19679 |
| 19 | Ga0065704_10071090 | 3300005289 | Bacteria | 13241 |
| 20 | Ga0070658_10000149 | 3300005327 | Bacteria | 61881 |
| 21 | Ga0070658_10003409 | 3300005327 | Bacteria | 13076 |
| 22 | Ga0070683_100048993 | 3300005329 | Viruses | 3906 |
| 23 | Ga0070660_100146895 | 3300005339 | Bacteria | 1894 |
| 24 | Ga0070692_10001069 | 3300005345 | Bacteria | 9507 |
| 25 | Ga0070659_100001312 | 3300005366 | Bacteria | 18018 |
| 26 | Ga0070659_100003799 | 3300005366 | Bacteria | 10779 |
| 27 | Ga0070703_10000125 | 3300005406 | Bacteria | 39636 |
| 28 | Ga0070700_100004522 | 3300005441 | Bacteria | 7272 |
| 29 | Ga0070698_100005960 | 3300005471 | Bacteria | 13286 |
| 30 | Ga0070699_100056262 | 3300005518 | Bacteria | 3406 |
| 31 | Ga0070684_100014666 | 3300005535 | Bacteria | 6356 |
| 32 | Ga0070665_100000038 | 3300005548 | Bacteria | 309230 |
| 33 | Ga0068855_100076646 | 3300005563 | Bacteria | 3880 |
| 34 | Ga0068860_100000032 | 3300005843 | Bacteria | 251624 |
| 35 | Ga0075432_10000527 | 3300006058 | Bacteria | 11492 |
| 36 | Ga0097621_100000191 | 3300006237 | Bacteria | 39497 |
| 37 | Ga0068871_100000314 | 3300006358 | Bacteria | 33723 |
| 38 | Ga0075436_100000184 | 3300006914 | Bacteria | 39212 |
| 39 | Ga0099826_10001723 | 3300006948 | Bacteria | 13477 |
| 40 | Ga0105251_10009777 | 3300009011 | Bacteria | 5626 |
| 41 | Ga0105251_10012643 | 3300009011 | Bacteria | 4768 |
| 42 | Ga0105244_10010388 | 3300009036 | Bacteria | 5649 |
| 43 | Ga0105244_10047013 | 3300009036 | Bacteria | 2215 |
| 44 | Ga0105250_10004561 | 3300009092 | Bacteria | 6350 |
| 45 | Ga0105240_10022121 | 3300009093 | Bacteria | 8438 |
| 46 | Ga0105243_10004165 | 3300009148 | Bacteria | 11475 |
| 47 | Ga0105238_10000687 | 3300009551 | Bacteria | 35477 |
| 48 | Ga0105239_10000028 | 3300010375 | Bacteria | 243470 |
| 49 | Ga0157345_1000030 | 3300012498 | Bacteria | 35357 |
| 50 | Ga0157371_10013220 | 3300013102 | Bacteria | 6283 |
| 51 | Ga0157370_10009082 | 3300013104 | Bacteria | 10661 |
| 52 | Ga0157370_10013018 | 3300013104 | Bacteria | 8593 |
| 53 | Ga0157372_10006723 | 3300013307 | Bacteria | 12230 |
| 54 | Ga0182008_10000657 | 3300014497 | Bacteria | 25118 |
| 55 | Ga0182008_10002228 | 3300014497 | Bacteria | 12283 |
| 56 | Ga0182008_10005591 | 3300014497 | Bacteria | 7128 |
| 57 | Ga0182006_1000017 | 3300015261 | Bacteria | 299454 |
| 58 | Ga0182005_1012108 | 3300015265 | Bacteria | 2443 |
| 59 | Ga0209759_1004682 | 3300025256 | Bacteria | 5014 |
| 60 | Ga0209233_1000548 | 3300025261 | Bacteria | 20828 |
| 61 | Ga0209565_1000001 | 3300025263 | Bacteria | 2950419 |
| 62 | Ga0209673_1000001 | 3300025273 | Bacteria | 3176258 |
| 63 | Ga0209673_1000225 | 3300025273 | Bacteria | 111612 |
| 64 | Ga0209675_1000001 | 3300025291 | Bacteria | 2950293 |
| 65 | Ga0209676_1000107 | 3300025292 | Bacteria | 221793 |
| 66 | Ga0209564_1000001 | 3300025295 | Bacteria | 3176258 |
| 67 | Ga0209050_1000056 | 3300025298 | Bacteria | 338703 |
| 68 | Ga0209050_1000088 | 3300025298 | Bacteria | 257442 |
| 69 | Ga0209050_1000315 | 3300025298 | Bacteria | 98447 |
| 70 | Ga0209256_1000006 | 3300025299 | Bacteria | 1250310 |
| 71 | Ga0209256_1000229 | 3300025299 | Bacteria | 102094 |
| 72 | Ga0209256_1000997 | 3300025299 | Bacteria | 33618 |
| 73 | Ga0209256_1009731 | 3300025299 | Bacteria | 4152 |
| 74 | Ga0209051_1000022 | 3300025303 | Bacteria | 474879 |
| 75 | Ga0209257_1000030 | 3300025304 | Bacteria | 689812 |
| 76 | Ga0209257_1003229 | 3300025304 | Bacteria | 14357 |
| 77 | Ga0207655_1000782 | 3300025728 | Bacteria | 34897 |
| 78 | Ga0207655_1004139 | 3300025728 | Bacteria | 10416 |
| 79 | Ga0207713_1007350 | 3300025735 | Bacteria | 6516 |
| 80 | Ga0207713_1028248 | 3300025735 | Bacteria | 2533 |
| 81 | Ga0207653_10000208 | 3300025885 | Bacteria | 39517 |
| 82 | Ga0207705_10000022 | 3300025909 | Bacteria | 302232 |
| 83 | Ga0207695_10001687 | 3300025913 | Bacteria | 35481 |
| 84 | Ga0207694_10000044 | 3300025924 | Bacteria | 169595 |
| 85 | Ga0207690_10001022 | 3300025932 | Bacteria | 17926 |
| 86 | Ga0207690_10002255 | 3300025932 | Bacteria | 11755 |
| 87 | Ga0207709_10002177 | 3300025935 | Bacteria | 12538 |
| 88 | Ga0207661_10121364 | 3300025944 | Unclassified | 2225 |
| 89 | Ga0207667_10150140 | 3300025949 | Bacteria | 2399 |
| 90 | Ga0207708_10003902 | 3300026075 | Bacteria | 10973 |
| 91 | Ga0209282_1005544 | 3300027666 | Bacteria | 7763 |
| 92 | Ga0207428_10005655 | 3300027907 | Bacteria | 11620 |
| 93 | Ga0268266_10000176 | 3300028379 | Bacteria | 115013 |
| 94 | Ga0268264_10000045 | 3300028381 | Bacteria | 364764 |
| 95 | Ga0268264_10068971 | 3300028381 | Bacteria | 2990 |
| 96 | Ga0307515_10046765 | 3300028794 | Bacteria | 6603 |
| 97 | Ga0307511_10001484 | 3300030521 | Bacteria | 24833 |
| 98 | Ga0265327_10001051 | 3300031251 | Bacteria | 38616 |
| 99 | Ga0265316_10002674 | 3300031344 | Bacteria | 18366 |
| 100 | Ga0395900_0002591 | 3300037418 | Bacteria | 19777 |
| 101 | Ga0395905_0001329 | 3300037471 | Bacteria | 30166 |
| 102 | Ga0395901_0009149 | 3300038443 | Bacteria | 10033 |
| 103 | Ga0395901_0035631 | 3300038443 | Bacteria | 5142 |
| 104 | Ga0439456_008573 | 3300042013 | Unclassified | 2112 |
| 105 | Ga0451577_0016908 | 3300042876 | Bacteria | 6746 |
| 106 | Ga0466969_0003635 | 3300044656 | Bacteria | 8206 |
| 107 | Ga0466966_0008571 | 3300044684 | Bacteria | 6766 |
| 108 | Ga0466961_0000730 | 3300044693 | Bacteria | 20657 |
| 109 | Ga0466961_0001832 | 3300044693 | Bacteria | 13193 |
| 110 | Ga0453684_0113144 | 3300044712 | Bacteria | 3293 |
| 111 | Ga0453684_0189316 | 3300044712 | Bacteria | 2408 |
| 112 | Ga0466957_0010782 | 3300044842 | Bacteria | 5255 |
| 113 | Ga0466959_0007071 | 3300045049 | Bacteria | 7846 |
| 114 | Ga0451576_0022492 | 3300045051 | Bacteria | 6835 |
| 115 | Ga0466958_0004252 | 3300045836 | Bacteria | 7529 |
| 116 | Ga0495627_000324 | 3300046453 | Bacteria | 46576 |
| 117 | Ga0495591_002312 | 3300046458 | Bacteria | 10781 |
| 118 | Ga0495584_0000714 | 3300046491 | Bacteria | 21918 |
| 119 | Ga0495596_0000359 | 3300046500 | Bacteria | 29317 |
| 120 | Ga0495607_0000745 | 3300046501 | Bacteria | 31188 |
| 121 | Ga0495583_0017554 | 3300046506 | Bacteria | 3795 |
| 122 | Ga0495606_0005401 | 3300046507 | Bacteria | 12251 |
| 123 | Ga0495606_0005845 | 3300046507 | Bacteria | 11603 |
| 124 | Ga0495606_0007674 | 3300046507 | Bacteria | 9566 |
| 125 | Ga0495632_0000023 | 3300046519 | Bacteria | 180933 |
| 126 | Ga0495632_0015041 | 3300046519 | Bacteria | 4353 |
| 127 | Ga0495637_0000187 | 3300046520 | Bacteria | 48520 |
| 128 | Ga0495637_0022610 | 3300046520 | Bacteria | 2866 |
| 129 | Ga0495648_0041075 | 3300046524 | Bacteria | 2925 |
| 130 | Ga0495663_0000019 | 3300046525 | Bacteria | 129361 |
| 131 | Ga0495654_0002736 | 3300046530 | Bacteria | 11125 |
| 132 | Ga0495633_0000282 | 3300046558 | Bacteria | 58356 |
| 133 | Ga0495625_0000116 | 3300046660 | Bacteria | 122740 |
| 134 | Ga0495625_0000445 | 3300046660 | Bacteria | 62062 |
| 135 | Ga0495625_0048976 | 3300046660 | Bacteria | 3039 |
| 136 | Ga0495661_0001867 | 3300046665 | Bacteria | 16830 |
| 137 | Ga0495649_0000436 | 3300046694 | Bacteria | 36073 |
| 138 | Ga0495589_0001606 | 3300046794 | Bacteria | 12947 |
| 139 | Ga0495672_0013664 | 3300047320 | Bacteria | 5589 |
| 140 | Ga0495683_0001988 | 3300047323 | Bacteria | 12734 |
| 141 | Ga0495686_0000768 | 3300047472 | Bacteria | 42318 |
| 142 | Ga0495686_0041719 | 3300047472 | Bacteria | 2921 |
| 143 | Ga0495626_0003524 | 3300048091 | Bacteria | 10019 |
| 144 | Ga0496107_0000058 | 3300048910 | Bacteria | 54924 |
| 145 | Ga0496115_0000455 | 3300048918 | Bacteria | 32821 |
| 146 | Ga0496116_0040983 | 3300048919 | Bacteria | 3182 |
| 147 | Ga0496119_0018016 | 3300048922 | Bacteria | 5279 |
| 148 | Ga0496119_0069319 | 3300048922 | Unclassified | 2073 |
| 149 | Ga0496120_0005090 | 3300048923 | Bacteria | 10641 |
| 150 | Ga0496121_0000008 | 3300048924 | Bacteria | 843593 |
| 151 | Ga0496121_0000484 | 3300048924 | Bacteria | 77129 |
| 152 | Ga0496121_0058671 | 3300048924 | Bacteria | 3179 |
| 153 | Ga0496122_0000870 | 3300048925 | Bacteria | 56865 |
| 154 | Ga0496123_0000664 | 3300048926 | Bacteria | 56865 |
| 155 | Ga0496124_0002739 | 3300048927 | Bacteria | 22472 |
| 156 | Ga0496125_0120375 | 3300048928 | Bacteria | 1874 |
| 157 | Ga0496126_0026591 | 3300048929 | Bacteria | 5545 |
| 158 | Ga0496126_0030668 | 3300048929 | Bacteria | 5091 |
| 159 | Ga0495678_001439 | 3300049459 | Bacteria | 18729 |
| 160 | Ga0495682_0000936 | 3300049460 | Bacteria | 17697 |
| 161 | Ga0495682_0013280 | 3300049460 | Unclassified | 3138 |
| 162 | Ga0501267_000374 | 3300049764 | Bacteria | 3397 |
| 163 | Ga0501035_0002590 | 3300049822 | Bacteria | 17657 |
| 164 | Ga0501044_0270773 | 3300049823 | Bacteria | 1634 |
| 165 | nmdc:mga0k408_17443_c1 | 3300050493 | Bacteria | 2478 |
| 166 | nmdc:mga08x19_748_c1 | 3300050514 | Bacteria | 20763 |
| 167 | Ga0500572_000232 | 3300053111 | Bacteria | 19789 |
| 168 | Ga0500568_0023788 | 3300053139 | Bacteria | 2602 |
| 169 | Ga0500573_0000003 | 3300053140 | Bacteria | 355643 |
| 170 | Ga0500604_0029596 | 3300053151 | Bacteria | 1598 |
| 171 | Ga0500616_0000310 | 3300053153 | Bacteria | 70057 |
| 172 | 2511343448 | 2511231019 | Bacteria | 6520662 |
| 173 | 2513587397 | 2513237086 | Bacteria | 7265287 |
| 174 | 2601612497 | 2600255279 | Bacteria | 5605316 |
| 175 | 2601749386 | 2600255308 | Bacteria | 5611129 |
| 176 | 2643731458 | 2643221541 | Bacteria | 5498788 |
| 177 | 2643881325 | 2643221573 | Bacteria | 4784121 |
| 178 | 2644008169 | 2643221599 | Bacteria | 6292121 |
| 179 | 2644042214 | 2643221606 | Bacteria | 5588032 |
| 180 | 2644394144 | 2643221671 | Bacteria | 5496681 |
| 181 | 2776260502 | 2775506901 | Bacteria | 9631051 |
| 182 | 2792750305 | 2791355123 | Bacteria | 8049106 |
| 183 | 2793345184 | 2791355264 | Bacteria | 6429314 |
| 184 | 2793354080 | 2791355265 | Bacteria | 6539969 |
| 185 | 2841739771 | 2841734538 | Bacteria | 6784580 |
| 186 | 2842777771 | 2842775625 | Bacteria | 5587290 |
| 187 | 2856342359 | 2856342000 | Bacteria | 7176905 |
| 188 | 2871436778 | 2871435913 | Bacteria | 6880295 |
| 189 | 2909400067 | 2909399089 | Bacteria | 3922598 |
| 190 | 2937022121 | 2937016420 | Bacteria | 6782579 |
| 191 | 2939677253 | 2939674588 | Bacteria | 4844420 |
| 192 | 2957491054 | 2957484790 | Bacteria | 6703082 |
| 193 | 2974310329 | 2974307012 | Bacteria | 4172388 |
| 194 | 2984514448 | 2984514374 | Bacteria | 4172479 |
| 195 | 2996390522 | 2996386984 | Bacteria | 6978667 |
| 196 | 3003934553 | 3003930520 | Bacteria | 5667563 |
| 197 | 8001845441 | 8001845381 | Bacteria | 5804942 |
| 198 | 8005684646 | 8005682033 | Bacteria | 6726518 |
| 199 | 8018130510 | 8018127388 | Bacteria | 7351159 |
| 200 | 8056150607 | 8056148874 | Bacteria | 6479865 |
| 201 | Ga0466966_0004596 | |||
| 202 | SwRhRL2b_contig_796017 | |||
| 203 | JGI24739J22299_10000412 | |||
| 204 | rootH1_10000282 | |||
| 205 | rootH1_10020809 | |||
| 206 | rootH1_10064175 | |||
| 207 | Ga0055526_1000015 | |||
| 208 | Ga0055537_1000053 | |||
| 209 | Ga0055524_1000059 | |||
| 210 | Ga0055524_1002695 | |||
| 211 | Ga0055536_1000017 | |||
| 212 | Ga0055534_1000017 | |||
| 213 | Ga0055528_1000008 | |||
| 214 | Ga0055528_1000041 | |||
| 215 | Ga0055530_10000032 | |||
| 216 | Ga0055530_10000876 | |||
| 217 | Ga0055531_10001218 | |||
| 218 | Ga0065704_10071090 | |||
| 219 | Ga0070658_10000149 | |||
| 220 | Ga0070658_10003409 | |||
| 221 | Ga0070683_100048993 | |||
| 222 | Ga0070660_100146895 | |||
| 223 | Ga0070692_10001069 | |||
| 224 | Ga0070659_100001312 | |||
| 225 | Ga0070659_100003799 | |||
| 226 | Ga0070703_10000125 | |||
| 227 | Ga0070700_100004522 | |||
| 228 | Ga0070698_100005960 | |||
| 229 | Ga0070699_100056262 | |||
| 230 | Ga0070684_100014666 | |||
| 231 | Ga0070665_100000038 | |||
| 232 | Ga0068855_100076646 | |||
| 233 | Ga0068860_100000032 | |||
| 234 | Ga0075432_10000527 | |||
| 235 | Ga0097621_100000191 | |||
| 236 | Ga0068871_100000314 | |||
| 237 | Ga0075436_100000184 | |||
| 238 | Ga0099826_10001723 | |||
| 239 | Ga0105251_10009777 | |||
| 240 | Ga0105251_10012643 | |||
| 241 | Ga0105244_10010388 | |||
| 242 | Ga0105244_10047013 | |||
| 243 | Ga0105250_10004561 | |||
| 244 | Ga0105240_10022121 | |||
| 245 | Ga0105243_10004165 | |||
| 246 | Ga0105238_10000687 | |||
| 247 | Ga0105239_10000028 | |||
| 248 | Ga0157345_1000030 | |||
| 249 | Ga0157371_10013220 | |||
| 250 | Ga0157370_10009082 | |||
| 251 | Ga0157370_10013018 | |||
| 252 | Ga0157372_10006723 | |||
| 253 | Ga0182008_10000657 | |||
| 254 | Ga0182008_10002228 | |||
| 255 | Ga0182008_10005591 | |||
| 256 | Ga0182006_1000017 | |||
| 257 | Ga0182005_1012108 | |||
| 258 | Ga0209759_1004682 | |||
| 259 | Ga0209233_1000548 | |||
| 260 | Ga0209565_1000001 | |||
| 261 | Ga0209673_1000001 | |||
| 262 | Ga0209673_1000225 | |||
| 263 | Ga0209675_1000001 | |||
| 264 | Ga0209676_1000107 | |||
| 265 | Ga0209564_1000001 | |||
| 266 | Ga0209050_1000056 | |||
| 267 | Ga0209050_1000088 | |||
| 268 | Ga0209050_1000315 | |||
| 269 | Ga0209256_1000006 | |||
| 270 | Ga0209256_1000229 | |||
| 271 | Ga0209256_1000997 | |||
| 272 | Ga0209256_1009731 | |||
| 273 | Ga0209051_1000022 | |||
| 274 | Ga0209257_1000030 | |||
| 275 | Ga0209257_1003229 | |||
| 276 | Ga0207655_1000782 | |||
| 277 | Ga0207655_1004139 | |||
| 278 | Ga0207713_1007350 | |||
| 279 | Ga0207713_1028248 | |||
| 280 | Ga0207653_10000208 | |||
| 281 | Ga0207705_10000022 | |||
| 282 | Ga0207695_10001687 | |||
| 283 | Ga0207694_10000044 | |||
| 284 | Ga0207690_10001022 | |||
| 285 | Ga0207690_10002255 | |||
| 286 | Ga0207709_10002177 | |||
| 287 | Ga0207661_10121364 | |||
| 288 | Ga0207667_10150140 | |||
| 289 | Ga0207708_10003902 | |||
| 290 | Ga0209282_1005544 | |||
| 291 | Ga0207428_10005655 | |||
| 292 | Ga0268266_10000176 | |||
| 293 | Ga0268264_10000045 | |||
| 294 | Ga0268264_10068971 | |||
| 295 | Ga0307515_10046765 | |||
| 296 | Ga0307511_10001484 | |||
| 297 | Ga0265327_10001051 | |||
| 298 | Ga0265316_10002674 | |||
| 299 | Ga0395900_0002591 | |||
| 300 | Ga0395905_0001329 | |||
| 301 | Ga0395901_0009149 | |||
| 302 | Ga0395901_0035631 | |||
| 303 | Ga0439456_008573 | |||
| 304 | Ga0451577_0016908 | |||
| 305 | Ga0466969_0003635 | |||
| 306 | Ga0466966_0008571 | |||
| 307 | Ga0466961_0000730 | |||
| 308 | Ga0466961_0001832 | |||
| 309 | Ga0453684_0113144 | |||
| 310 | Ga0453684_0189316 | |||
| 311 | Ga0466957_0010782 | |||
| 312 | Ga0466959_0007071 | |||
| 313 | Ga0451576_0022492 | |||
| 314 | Ga0466958_0004252 | |||
| 315 | Ga0495627_000324 | |||
| 316 | Ga0495591_002312 | |||
| 317 | Ga0495584_0000714 | |||
| 318 | Ga0495596_0000359 | |||
| 319 | Ga0495607_0000745 | |||
| 320 | Ga0495583_0017554 | |||
| 321 | Ga0495606_0005401 | |||
| 322 | Ga0495606_0005845 | |||
| 323 | Ga0495606_0007674 | |||
| 324 | Ga0495632_0000023 | |||
| 325 | Ga0495632_0015041 | |||
| 326 | Ga0495637_0000187 | |||
| 327 | Ga0495637_0022610 | |||
| 328 | Ga0495648_0041075 | |||
| 329 | Ga0495663_0000019 | |||
| 330 | Ga0495654_0002736 | |||
| 331 | Ga0495633_0000282 | |||
| 332 | Ga0495625_0000116 | |||
| 333 | Ga0495625_0000445 | |||
| 334 | Ga0495625_0048976 | |||
| 335 | Ga0495661_0001867 | |||
| 336 | Ga0495649_0000436 | |||
| 337 | Ga0495589_0001606 | |||
| 338 | Ga0495672_0013664 | |||
| 339 | Ga0495683_0001988 | |||
| 340 | Ga0495686_0000768 | |||
| 341 | Ga0495686_0041719 | |||
| 342 | Ga0495626_0003524 | |||
| 343 | Ga0496107_0000058 | |||
| 344 | Ga0496115_0000455 | |||
| 345 | Ga0496116_0040983 | |||
| 346 | Ga0496119_0018016 | |||
| 347 | Ga0496119_0069319 | |||
| 348 | Ga0496120_0005090 | |||
| 349 | Ga0496121_0000008 | |||
| 350 | Ga0496121_0000484 | |||
| 351 | Ga0496121_0058671 | |||
| 352 | Ga0496122_0000870 | |||
| 353 | Ga0496123_0000664 | |||
| 354 | Ga0496124_0002739 | |||
| 355 | Ga0496125_0120375 | |||
| 356 | Ga0496126_0026591 | |||
| 357 | Ga0496126_0030668 | |||
| 358 | Ga0495678_001439 | |||
| 359 | Ga0495682_0000936 | |||
| 360 | Ga0495682_0013280 | |||
| 361 | Ga0501267_000374 | |||
| 362 | Ga0501035_0002590 | |||
| 363 | Ga0501044_0270773 | |||
| 364 | nmdc:mga0k408_17443_c1 | |||
| 365 | nmdc:mga08x19_748_c1 | |||
| 366 | Ga0500572_000232 | |||
| 367 | Ga0500568_0023788 | |||
| 368 | Ga0500573_0000003 | |||
| 369 | Ga0500604_0029596 | |||
| 370 | Ga0500616_0000310 | |||
| 371 | 2511343448 | |||
| 372 | 2513587397 | |||
| 373 | 2601612497 | |||
| 374 | 2601749386 | |||
| 375 | 2643731458 | |||
| 376 | 2643881325 | |||
| 377 | 2644008169 | |||
| 378 | 2644042214 | |||
| 379 | 2644394144 | |||
| 380 | 2776260502 | |||
| 381 | 2792750305 | |||
| 382 | 2793345184 | |||
| 383 | 2793354080 | |||
| 384 | 2841739771 | |||
| 385 | 2842777771 | |||
| 386 | 2856342359 | |||
| 387 | 2871436778 | |||
| 388 | 2909400067 | |||
| 389 | 2937022121 | |||
| 390 | 2939677253 | |||
| 391 | 2957491054 | |||
| 392 | 2974310329 | |||
| 393 | 2984514448 | |||
| 394 | 2996390522 | |||
| 395 | 3003934553 | |||
| 396 | 8001845441 | |||
| 397 | 8005684646 | |||
| 398 | 8018130510 | |||
| 399 | 8056150607 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3g7u-assembly1.cif.gz_A | crystal structure of putative dna modification methyltransferase encoded within prophage cp-933r (e.coli) | 0.8011 | 19 | 478 |
| 3g7u-assembly1.cif.gz_A | crystal structure of putative dna modification methyltransferase encoded within prophage cp-933r (e.coli) | 0.7925 | 19 | 478 |
| 2z6u-assembly1.cif.gz_A | ternary structure of the glu119ala m.hhai, c5-cytosine dna methyltransferase, with unmodified dna and adohcy | 0.7837 | 19 | 478 |
| 1fjx-assembly1.cif.gz_A | structure of ternary complex of hhai methyltransferase mutant (t250g) in complex with dna and adohcy | 0.7674 | 19 | 478 |
| 1svu-assembly1.cif.gz_A | structure of the q237w mutant of hhai dna methyltransferase: an insight into protein-protein interactions | 0.764 | 19 | 478 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_K7L7D0_19_92_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8854 | 145 | 205 | 3.40.50.150 |
| 1svuA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8335 | 19 | 232 | 3.40.50.150 |
| 3g7uA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8332 | 19 | 212 | 3.40.50.150 |
| af_Q9VKB3_3_179_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8108 | 19 | 213 | 3.40.50.150 |
| af_P40999_6_178_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8006 | 18 | 204 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1K1YRM4-F1-model_v4 | deleted | 0.9541 | 145 | 495 |
|
| AF-A0A1K1YRM4-F1-model_v4 | deleted | 0.941 | 145 | 495 |
|
| AF-A0A3S2BD62-F1-model_v4 | deleted | 0.9394 | 306 | 483 |
|
| AF-D1CSC3-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9172 | 120 | 254 |
GO:0003677
GO:0009307 GO:0032259 GO:0044027 GO:0051719 GO:0051720 |
| AF-C5B578-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9164 | 18 | 483 |
GO:0003677
GO:0009307 GO:0032259 GO:0044027 GO:0051719 GO:0051720 |