F307375

General Info

Members Datasets Scaffolds Average Seq Length
200 149 200 381

Family's Representative Sequence

Representative Sequence 3300031665|Ga0316575_10038771|Ga0316575_100387712
Length 431
Sequence MVPAGNRALSGDPPAGGGGPLRAGTVVPGCLRPCARGTRTVGAMTTLDAESPAKAGRWTAQWKELYAEVITTGLCTGCAGCVVTCPHDVIGYEHEEGKYVPFHLEEELGPDNCVHGEKGCTTCTRACPRFRAWEPAADVHLFGRVREPDEMYGVWRQLLLTRASDATVHHLGQDGGFVSAMLIWLRENDYIDGALVSGVEDDDHWKAKPVVVQSRDEILATAGSRYTYCANPLALPEARDRGLERLALVGMGCQTSSPPVMWDRKAGKVSKPFLFNIGLLCSKTFDDAIFTELFEAKYGLKKQDMAKMNIKGVFQIWMKDGSYHEIDLKECHAWTRRGCKSCPDFAAEHSDIATGGIGEDNDWTLTIVRTELGEEVISRMVADGVIESKPAQTDEKAMKLLRMLSIVSRRRWPKEADPAPAVGVPAQPAAR

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
55 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
56 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
57 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
58 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
59 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
60 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
61 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
62 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
68 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
69 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
70 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
71 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
72 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
75 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
76 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
77 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
78 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
87 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
94 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
95 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
136 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.5
Nodule 0
Rhizoplane 13
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 2.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100103029 3300005330 Bacteria 1895
2 Ga0070689_100062330 3300005340 Bacteria 2901
3 Ga0070689_100097174 3300005340 Bacteria 2328
4 Ga0070661_100216156 3300005344 Bacteria 1469
5 Ga0070671_100006081 3300005355 Bacteria 9619
6 Ga0070674_100055299 3300005356 Bacteria 2748
7 Ga0070708_100026238 3300005445 Bacteria 4986
8 Ga0070708_100031301 3300005445 Bacteria 4604
9 Ga0070681_10018702 3300005458 Bacteria 6931
10 Ga0070681_10056208 3300005458 Bacteria 3917
11 Ga0070681_10330661 3300005458 Bacteria 1433
12 Ga0068867_100025867 3300005459 Bacteria 4210
13 Ga0070706_100010268 3300005467 Bacteria 8698
14 Ga0070699_100074669 3300005518 Bacteria 2950
15 Ga0070697_100009543 3300005536 Bacteria 7579
16 Ga0070686_100011927 3300005544 Bacteria 4941
17 Ga0070704_100124032 3300005549 Bacteria 1989
18 Ga0068859_100130447 3300005617 Bacteria 2585
19 Ga0068859_100177297 3300005617 Bacteria 2213
20 Ga0068858_100001594 3300005842 Bacteria 23126
21 Ga0081455_10124252 3300005937 Bacteria 2028
22 Ga0075365_10003718 3300006038 Bacteria 7932
23 Ga0075363_100101139 3300006048 Bacteria 1595
24 Ga0075363_100136774 3300006048 Bacteria 1377
25 Ga0097621_100019556 3300006237 Bacteria 5200
26 Ga0068871_100184377 3300006358 Bacteria 1795
27 Ga0075428_100000002 3300006844 Bacteria 546374
28 Ga0075428_100031947 3300006844 Bacteria 5816
29 Ga0075428_100196576 3300006844 Bacteria 2181
30 Ga0075430_100081155 3300006846 Bacteria 2717
31 Ga0075431_100020971 3300006847 Bacteria 6678
32 Ga0075433_10027511 3300006852 Bacteria 4824
33 Ga0075434_100045091 3300006871 Bacteria 4374
34 Ga0075429_100022114 3300006880 Bacteria 5515
35 Ga0097620_100130448 3300006931 Bacteria 2585
36 Ga0097620_100177283 3300006931 Bacteria 2213
37 Ga0075435_100041680 3300007076 Bacteria 3670
38 Ga0111539_10027172 3300009094 Bacteria 6989
39 Ga0111539_10077580 3300009094 Bacteria 3910
40 Ga0111539_10120408 3300009094 Bacteria 3075
41 Ga0105247_10043367 3300009101 Bacteria 2755
42 Ga0114129_10206392 3300009147 Bacteria 2658
43 Ga0114129_10691155 3300009147 Bacteria 1312
44 Ga0105243_10095160 3300009148 Bacteria 2461
45 Ga0105242_10012056 3300009176 Bacteria 6653
46 Ga0105248_10074958 3300009177 Bacteria 3803
47 Ga0105248_10121382 3300009177 Bacteria 2948
48 Ga0157374_10489255 3300013296 Bacteria 1234
49 Ga0157378_10002258 3300013297 Bacteria 17116
50 Ga0157378_10103138 3300013297 Bacteria 2606
51 Ga0163163_10003414 3300014325 Bacteria 13496
52 Ga0157379_10024936 3300014968 Bacteria 5307
53 Ga0213873_10002166 3300021358 Bacteria 3368
54 Ga0213876_10026381 3300021384 Bacteria 3064
55 Ga0207642_10014073 3300025899 Bacteria 2940
56 Ga0207684_10007477 3300025910 Bacteria 9832
57 Ga0207684_10159124 3300025910 Bacteria 1944
58 Ga0207707_10013830 3300025912 Bacteria 7037
59 Ga0207707_10087897 3300025912 Bacteria 2715
60 Ga0207659_10125535 3300025926 Bacteria 1973
61 Ga0207644_10085728 3300025931 Bacteria 2337
62 Ga0207670_10130079 3300025936 Bacteria 1843
63 Ga0207704_10018725 3300025938 Bacteria 3621
64 Ga0207640_10065293 3300025981 Bacteria 2428
65 Ga0207677_10209518 3300026023 Bacteria 1555
66 Ga0207703_10026541 3300026035 Bacteria 4560
67 Ga0207648_10028264 3300026089 Bacteria 4974
68 Ga0207676_10208594 3300026095 Bacteria 1732
69 Ga0207675_100010284 3300026118 Bacteria 8766
70 Ga0316575_10038771 3300031665 Bacteria 1880
71 Ga0316576_10005896 3300031727 Bacteria 7563
72 Ga0316576_10017168 3300031727 Bacteria 4910
73 Ga0316576_10035004 3300031727 Bacteria 3582
74 Ga0316576_10066382 3300031727 Bacteria 2653
75 Ga0316578_10000785 3300031728 Bacteria 11729
76 Ga0316585_10005493 3300032137 Bacteria 3580
77 Ga0316580_10001392 3300032139 Bacteria 6309
78 Ga0373932_0000054 3300035112 Bacteria 27952
79 Ga0373945_0063479 3300035116 Bacteria 1383
80 Ga0373946_0098559 3300035171 Bacteria 1307
81 Ga0316574_0009298 3300035398 Bacteria 5499
82 Ga0316574_0022252 3300035398 Bacteria 3774
83 Ga0316574_0089973 3300035398 Bacteria 1956
84 Ga0316574_0100803 3300035398 Bacteria 1848
85 Ga0373947_0103912 3300035725 Bacteria 1788
86 Ga0373937_0112166 3300036401 Bacteria 2536
87 Ga0316584_0017406 3300036712 Bacteria 5165
88 Ga0436365_0121807 3300039437 Bacteria 10856
89 Ga0436365_0317315 3300039437 Bacteria 3418
90 Ga0436365_0856368 3300039437 Bacteria 1575
91 Ga0436365_0985677 3300039437 Bacteria 2460
92 Ga0436360_0432017 3300039438 Bacteria 4328
93 Ga0436361_0007390 3300039447 Bacteria 3967
94 Ga0436362_0428546 3300039453 Bacteria 17310
95 Ga0439432_034326 3300042006 Bacteria 1629
96 Ga0439452_013693 3300042010 Bacteria 2270
97 Ga0439446_0034242 3300042156 Bacteria 1478
98 Ga0451577_0146348 3300042876 Bacteria 2124
99 Ga0466966_0008000 3300044684 Bacteria 7008
100 Ga0466961_0038109 3300044693 Bacteria 3084
101 Ga0466961_0106405 3300044693 Bacteria 1766
102 Ga0466963_0059324 3300044694 Bacteria 2554
103 Ga0453684_0056122 3300044712 Bacteria 5112
104 Ga0466971_0060856 3300044719 Bacteria 1707
105 Ga0466960_0030865 3300044901 Bacteria 2469
106 Ga0466967_0110688 3300045976 Bacteria 2523
107 Ga0495629_0149991 3300046459 Bacteria 1621
108 Ga0495629_0165307 3300046459 Bacteria 1537
109 Ga0495651_0182021 3300046462 Bacteria 1487
110 Ga0495653_0079343 3300046463 Bacteria 2431
111 Ga0495639_0036448 3300046475 Bacteria 2203
112 Ga0495628_0323440 3300046516 Bacteria 1138
113 Ga0495652_0139247 3300046529 Bacteria 1910
114 Ga0495586_0022676 3300046535 Bacteria 3350
115 Ga0495587_0063958 3300046536 Bacteria 2150
116 Ga0495621_0006601 3300046539 Bacteria 3396
117 Ga0495667_0017369 3300046559 Bacteria 4860
118 Ga0495667_0139982 3300046559 Bacteria 1559
119 Ga0495634_0002087 3300046642 Bacteria 16892
120 Ga0495635_0063274 3300046663 Bacteria 2541
121 Ga0495659_0022116 3300046664 Bacteria 2148
122 Ga0495599_0136778 3300046678 Bacteria 1521
123 Ga0495599_0239480 3300046678 Bacteria 1107
124 Ga0495623_0078709 3300046679 Bacteria 2043
125 Ga0495613_0008494 3300046689 Bacteria 7621
126 Ga0495680_0013921 3300047322 Bacteria 6998
127 Ga0495680_0066656 3300047322 Bacteria 2755
128 Ga0496100_0017223 3300048903 Bacteria 4262
129 Ga0496101_0022651 3300048904 Bacteria 4327
130 Ga0496102_0047874 3300048905 Bacteria 3887
131 Ga0496102_0134512 3300048905 Bacteria 2316
132 Ga0496103_0014389 3300048906 Bacteria 4699
133 Ga0496104_0035075 3300048907 Bacteria 4682
134 Ga0496104_0185824 3300048907 Bacteria 1989
135 Ga0496105_0011016 3300048908 Bacteria 7126
136 Ga0496105_0083745 3300048908 Bacteria 2634
137 Ga0496105_0255157 3300048908 Bacteria 1420
138 Ga0496106_0037656 3300048909 Bacteria 3619
139 Ga0496107_0053855 3300048910 Bacteria 2902
140 Ga0496108_0364811 3300048911 Bacteria 1261
141 Ga0496109_0027299 3300048912 Bacteria 5096
142 Ga0496110_0007360 3300048913 Bacteria 8788
143 Ga0496110_0015374 3300048913 Bacteria 6368
144 Ga0496110_0019788 3300048913 Bacteria 5671
145 Ga0496110_0022296 3300048913 Bacteria 5376
146 Ga0496110_0337109 3300048913 Bacteria 1374
147 Ga0496111_0012225 3300048914 Bacteria 5807
148 Ga0496111_0017231 3300048914 Bacteria 4992
149 Ga0496112_0000815 3300048915 Bacteria 22065
150 Ga0496112_0094156 3300048915 Bacteria 2966
151 Ga0496113_0205753 3300048916 Bacteria 1565
152 Ga0496114_0003167 3300048917 Bacteria 12618
153 Ga0496114_0017914 3300048917 Bacteria 5724
154 Ga0501032_0062910 3300049569 Bacteria 2486
155 Ga0501033_0038302 3300049570 Bacteria 3586
156 Ga0501034_0014882 3300049571 Bacteria 8003
157 Ga0501036_0066608 3300049572 Bacteria 3047
158 Ga0501036_0075606 3300049572 Bacteria 2848
159 Ga0501038_0195422 3300049574 Bacteria 1626
160 Ga0501039_0097824 3300049575 Bacteria 2289
161 Ga0501039_0134572 3300049575 Bacteria 1940
162 Ga0501040_0071430 3300049576 Bacteria 2396
163 Ga0501041_0096443 3300049577 Bacteria 1828
164 Ga0501042_0031225 3300049578 Bacteria 3769
165 Ga0501042_0071738 3300049578 Bacteria 2478
166 Ga0501043_0198389 3300049579 Bacteria 1559
167 Ga0501069_0002497 3300049585 Bacteria 9383
168 Ga0501070_0000230 3300049586 Bacteria 52769
169 Ga0501071_0023707 3300049587 Bacteria 4287
170 Ga0501072_0025634 3300049588 Bacteria 4593
171 Ga0501072_0382395 3300049588 Bacteria 1117
172 Ga0501073_0152704 3300049589 Bacteria 1600
173 Ga0501076_0093920 3300049592 Bacteria 2415
174 Ga0501077_0105629 3300049593 Bacteria 1785
175 Ga0501079_0054360 3300049741 Bacteria 3088
176 Ga0501080_0000606 3300049742 Bacteria 28368
177 Ga0501080_0289377 3300049742 Bacteria 1488
178 Ga0501081_0264005 3300049743 Bacteria 1258
179 Ga0501044_0003315 3300049823 Bacteria 18140
180 Ga0501045_0023694 3300049824 Bacteria 4403
181 Ga0501045_0153797 3300049824 Bacteria 1711
182 nmdc:mga00v17_100110_c1 3300050491 Bacteria 1829
183 nmdc:mga00v17_84400_c1 3300050491 Bacteria 1988
184 nmdc:mga06z11_71337_c1 3300050494 Bacteria 1839
185 nmdc:mga06z11_98147_c1 3300050494 Bacteria 1602
186 nmdc:mga05p37_305845_c1 3300050507 Bacteria 1887
187 nmdc:mga05p37_75392_c1 3300050507 Bacteria 4152
188 nmdc:mga09592_50959_c1 3300050508 Bacteria 3492
189 nmdc:mga06r32_232166_c1 3300050510 Bacteria 1833
190 nmdc:mga06r32_82718_c1 3300050510 Bacteria 3128
191 nmdc:mga08y16_85243_c1 3300050511 Bacteria 3292
192 nmdc:mga0rr50_16292_c1 3300050513 Bacteria 4932
193 nmdc:mga0a205_2057_c1 3300050515 Bacteria 17587
194 Ga0495601_0012719 3300053077 Bacteria 5050
195 Ga0495595_0081113 3300053084 Bacteria 1545
196 Ga0495619_0084989 3300053085 Bacteria 2136
197 Ga0500566_0000099 3300053094 Bacteria 43860
198 Ga0500616_0000141 3300053153 Bacteria 122164
199 Ga0501084_0057394 3300054114 Bacteria 3258
200 Ga0530510_0012243 3300061734 Bacteria 6021

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035171 Ga0373946_0098559 Ga0373946_0098559_283_1233 313
2 3300049588 Ga0501072_0382395 Ga0501072_0382395_23_1048 340
3 3300046516 Ga0495628_0323440 Ga0495628_0323440_55_1083 341
4 3300046559 Ga0495667_0017369 Ga0495667_0017369_3648_4679 342
5 3300046459 Ga0495629_0165307 Ga0495629_0165307_481_1518 344
6 3300046678 Ga0495599_0239480 Ga0495599_0239480_26_1069 345
7 3300049585 Ga0501069_0002497 Ga0501069_0002497_4021_5184 350
8 3300049586 Ga0501070_0000230 Ga0501070_0000230_20754_21917 350
9 3300049742 Ga0501080_0000606 Ga0501080_0000606_1183_2346 350
10 3300025926 Ga0207659_10125535 Ga0207659_101255351 360
11 3300048915 Ga0496112_0094156 Ga0496112_0094156_1542_2657 360
12 3300009094 Ga0111539_10077580 Ga0111539_100775802 361
13 3300013296 Ga0157374_10489255 Ga0157374_104892551 361
14 3300044719 Ga0466971_0060856 Ga0466971_0060856_335_1453 361
15 3300005458 Ga0070681_10056208 Ga0070681_100562081 362
16 3300025912 Ga0207707_10013830 Ga0207707_100138304 362
17 3300044693 Ga0466961_0038109 Ga0466961_0038109_736_1854 362
18 3300005445 Ga0070708_100026238 Ga0070708_1000262383 363
19 3300005549 Ga0070704_100124032 Ga0070704_1001240323 363
20 3300025910 Ga0207684_10159124 Ga0207684_101591242 363
21 3300025912 Ga0207707_10087897 Ga0207707_100878972 363
22 3300047322 Ga0495680_0066656 Ga0495680_0066656_856_1974 363
23 3300053084 Ga0495595_0081113 Ga0495595_0081113_34_1152 363
24 3300036401 Ga0373937_0112166 Ga0373937_0112166_75_1238 364
25 3300046463 Ga0495653_0079343 Ga0495653_0079343_397_1560 364
26 3300046529 Ga0495652_0139247 Ga0495652_0139247_29_1192 364
27 3300046536 Ga0495587_0063958 Ga0495587_0063958_605_1768 364
28 3300046663 Ga0495635_0063274 Ga0495635_0063274_540_1703 364
29 3300046678 Ga0495599_0136778 Ga0495599_0136778_118_1281 364
30 3300046679 Ga0495623_0078709 Ga0495623_0078709_347_1510 364
31 3300047322 Ga0495680_0013921 Ga0495680_0013921_552_1715 364
32 3300053077 Ga0495601_0012719 Ga0495601_0012719_254_1375 364
33 3300046539 Ga0495621_0006601 Ga0495621_0006601_1311_2453 368
34 3300013297 Ga0157378_10103138 Ga0157378_101031383 370
35 3300046535 Ga0495586_0022676 Ga0495586_0022676_1857_3005 370
36 3300046642 Ga0495634_0002087 Ga0495634_0002087_412_1560 370
37 3300046689 Ga0495613_0008494 Ga0495613_0008494_2992_4140 370
38 3300049593 Ga0501077_0105629 Ga0501077_0105629_150_1265 370
39 3300005445 Ga0070708_100031301 Ga0070708_1000313014 371
40 3300005458 Ga0070681_10330661 Ga0070681_103306611 371
41 3300005467 Ga0070706_100010268 Ga0070706_1000102681 371
42 3300005518 Ga0070699_100074669 Ga0070699_1000746691 371
43 3300005536 Ga0070697_100009543 Ga0070697_1000095435 371
44 3300005937 Ga0081455_10124252 Ga0081455_101242521 371
45 3300006844 Ga0075428_100031947 Ga0075428_1000319475 371
46 3300006846 Ga0075430_100081155 Ga0075430_1000811552 371
47 3300006847 Ga0075431_100020971 Ga0075431_1000209712 371
48 3300006852 Ga0075433_10027511 Ga0075433_100275115 371
49 3300006871 Ga0075434_100045091 Ga0075434_1000450912 371
50 3300006880 Ga0075429_100022114 Ga0075429_1000221142 371
51 3300007076 Ga0075435_100041680 Ga0075435_1000416804 371
52 3300009094 Ga0111539_10120408 Ga0111539_101204083 371
53 3300009147 Ga0114129_10206392 Ga0114129_102063923 371
54 3300009147 Ga0114129_10691155 Ga0114129_106911551 371
55 3300025910 Ga0207684_10007477 Ga0207684_1000747711 371
56 3300035116 Ga0373945_0063479 Ga0373945_0063479_136_1257 371
57 3300035725 Ga0373947_0103912 Ga0373947_0103912_154_1275 371
58 3300042006 Ga0439432_034326 Ga0439432_034326_257_1375 371
59 3300042010 Ga0439452_013693 Ga0439452_013693_883_2001 371
60 3300044901 Ga0466960_0030865 Ga0466960_0030865_555_1673 371
61 3300046664 Ga0495659_0022116 Ga0495659_0022116_439_1560 371
62 3300048911 Ga0496108_0364811 Ga0496108_0364811_51_1187 371
63 3300050507 nmdc:mga05p37_305845_c1 nmdc:mga05p37_305845_c1_715_1836 371
64 3300050507 nmdc:mga05p37_75392_c1 nmdc:mga05p37_75392_c1_2902_4023 371
65 3300050508 nmdc:mga09592_50959_c1 nmdc:mga09592_50959_c1_2032_3153 371
66 3300050510 nmdc:mga06r32_232166_c1 nmdc:mga06r32_232166_c1_41_1162 371
67 3300050510 nmdc:mga06r32_82718_c1 nmdc:mga06r32_82718_c1_11_1132 371
68 3300050513 nmdc:mga0rr50_16292_c1 nmdc:mga0rr50_16292_c1_3133_4254 371
69 3300050515 nmdc:mga0a205_2057_c1 nmdc:mga0a205_2057_c1_14155_15276 371
70 3300039437 Ga0436365_0121807 Ga0436365_0121807_8203_9363 372
71 3300039453 Ga0436362_0428546 Ga0436362_0428546_15045_16205 372
72 3300042156 Ga0439446_0034242 Ga0439446_0034242_17_1213 373
73 3300044694 Ga0466963_0059324 Ga0466963_0059324_1199_2329 373
74 3300045976 Ga0466967_0110688 Ga0466967_0110688_129_1259 373
75 3300005458 Ga0070681_10018702 Ga0070681_100187026 374
76 3300031727 Ga0316576_10017168 Ga0316576_100171682 374
77 3300048913 Ga0496110_0337109 Ga0496110_0337109_25_1152 374
78 3300005617 Ga0068859_100177297 Ga0068859_1001772973 375
79 3300006931 Ga0097620_100177283 Ga0097620_1001772832 375
80 3300031727 Ga0316576_10035004 Ga0316576_100350043 375
81 3300031728 Ga0316578_10000785 Ga0316578_1000078511 375
82 3300032137 Ga0316585_10005493 Ga0316585_100054933 375
83 3300032139 Ga0316580_10001392 Ga0316580_100013925 375
84 3300035398 Ga0316574_0009298 Ga0316574_0009298_1365_2591 375
85 3300036712 Ga0316584_0017406 Ga0316584_0017406_3220_4446 375
86 3300046462 Ga0495651_0182021 Ga0495651_0182021_324_1463 375
87 3300046559 Ga0495667_0139982 Ga0495667_0139982_151_1290 375
88 3300048907 Ga0496104_0185824 Ga0496104_0185824_186_1331 375
89 3300048908 Ga0496105_0255157 Ga0496105_0255157_167_1312 375
90 3300048913 Ga0496110_0015374 Ga0496110_0015374_3214_4359 375
91 3300048915 Ga0496112_0000815 Ga0496112_0000815_2630_3775 375
92 3300048916 Ga0496113_0205753 Ga0496113_0205753_80_1225 375
93 3300049569 Ga0501032_0062910 Ga0501032_0062910_506_1705 375
94 3300049824 Ga0501045_0153797 Ga0501045_0153797_260_1459 375
95 3300053085 Ga0495619_0084989 Ga0495619_0084989_801_1940 375
96 3300006048 Ga0075363_100101139 Ga0075363_1001011392 376
97 3300006844 Ga0075428_100196576 Ga0075428_1001965762 376
98 3300021358 Ga0213873_10002166 Ga0213873_100021663 376
99 3300021384 Ga0213876_10026381 Ga0213876_100263814 376
100 3300039437 Ga0436365_0985677 Ga0436365_0985677_426_1568 376
101 3300048913 Ga0496110_0022296 Ga0496110_0022296_2680_3957 376
102 3300049572 Ga0501036_0066608 Ga0501036_0066608_923_2128 376
103 3300049575 Ga0501039_0097824 Ga0501039_0097824_317_1522 376
104 3300049577 Ga0501041_0096443 Ga0501041_0096443_540_1745 376
105 3300054114 Ga0501084_0057394 Ga0501084_0057394_390_1595 376
106 3300026023 Ga0207677_10209518 Ga0207677_102095182 377
107 3300039447 Ga0436361_0007390 Ga0436361_0007390_2716_3876 377
108 3300049570 Ga0501033_0038302 Ga0501033_0038302_934_2133 377
109 3300049823 Ga0501044_0003315 Ga0501044_0003315_2238_3437 377
110 3300042876 Ga0451577_0146348 Ga0451577_0146348_529_1728 378
111 3300044684 Ga0466966_0008000 Ga0466966_0008000_2352_3518 378
112 3300044693 Ga0466961_0106405 Ga0466961_0106405_566_1732 378
113 3300044712 Ga0453684_0056122 Ga0453684_0056122_1421_2620 378
114 3300061734 Ga0530510_0012243 Ga0530510_0012243_658_1806 378
115 3300006844 Ga0075428_100000002 Ga0075428_100000002113 379
116 3300039437 Ga0436365_0317315 Ga0436365_0317315_1676_2848 379
117 3300039437 Ga0436365_0856368 Ga0436365_0856368_86_1237 379
118 3300039438 Ga0436360_0432017 Ga0436360_0432017_1913_3082 379
119 3300048905 Ga0496102_0134512 Ga0496102_0134512_1107_2249 379
120 3300053153 Ga0500616_0000141 Ga0500616_0000141_31248_32495 379
121 3300005340 Ga0070689_100097174 Ga0070689_1000971743 380
122 3300005842 Ga0068858_100001594 Ga0068858_10000159418 380
123 3300025936 Ga0207670_10130079 Ga0207670_101300792 380
124 3300046475 Ga0495639_0036448 Ga0495639_0036448_933_2087 380
125 3300049572 Ga0501036_0075606 Ga0501036_0075606_624_1868 380
126 3300049574 Ga0501038_0195422 Ga0501038_0195422_260_1504 380
127 3300049575 Ga0501039_0134572 Ga0501039_0134572_653_1897 380
128 3300049576 Ga0501040_0071430 Ga0501040_0071430_265_1509 380
129 3300049578 Ga0501042_0031225 Ga0501042_0031225_240_1484 380
130 3300049587 Ga0501071_0023707 Ga0501071_0023707_2255_3499 380
131 3300049589 Ga0501073_0152704 Ga0501073_0152704_98_1252 380
132 3300049741 Ga0501079_0054360 Ga0501079_0054360_876_2120 380
133 3300049742 Ga0501080_0289377 Ga0501080_0289377_90_1334 380
134 3300049824 Ga0501045_0023694 Ga0501045_0023694_2259_3503 380
135 3300005344 Ga0070661_100216156 Ga0070661_1002161561 381
136 3300009094 Ga0111539_10027172 Ga0111539_100271723 381
137 3300031727 Ga0316576_10066382 Ga0316576_100663822 381
138 3300046459 Ga0495629_0149991 Ga0495629_0149991_173_1330 381
139 3300049578 Ga0501042_0071738 Ga0501042_0071738_243_1418 381
140 3300049743 Ga0501081_0264005 Ga0501081_0264005_43_1218 381
141 3300050494 nmdc:mga06z11_98147_c1 nmdc:mga06z11_98147_c1_110_1333 381
142 3300050511 nmdc:mga08y16_85243_c1 nmdc:mga08y16_85243_c1_77_1252 381
143 3300035398 Ga0316574_0022252 Ga0316574_0022252_946_2133 382
144 3300049592 Ga0501076_0093920 Ga0501076_0093920_738_2015 382
145 3300026118 Ga0207675_100010284 Ga0207675_1000102843 383
146 3300009101 Ga0105247_10043367 Ga0105247_100433672 385
147 3300014325 Ga0163163_10003414 Ga0163163_100034145 385
148 3300014968 Ga0157379_10024936 Ga0157379_100249363 385
149 3300048908 Ga0496105_0083745 Ga0496105_0083745_1007_2311 385
150 3300048912 Ga0496109_0027299 Ga0496109_0027299_2434_3738 385
151 3300048913 Ga0496110_0007360 Ga0496110_0007360_1804_3108 385
152 3300048914 Ga0496111_0017231 Ga0496111_0017231_1105_2409 385
153 3300048917 Ga0496114_0003167 Ga0496114_0003167_6857_8161 385
154 3300035398 Ga0316574_0089973 Ga0316574_0089973_146_1396 386
155 3300031665 Ga0316575_10038771 Ga0316575_100387712 387
156 3300031727 Ga0316576_10005896 Ga0316576_100058966 387
157 3300035112 Ga0373932_0000054 Ga0373932_0000054_5582_6856 387
158 3300035398 Ga0316574_0100803 Ga0316574_0100803_127_1356 387
159 3300049571 Ga0501034_0014882 Ga0501034_0014882_2255_3565 387
160 3300050491 nmdc:mga00v17_84400_c1 nmdc:mga00v17_84400_c1_130_1404 387
161 3300049579 Ga0501043_0198389 Ga0501043_0198389_158_1396 388
162 3300049588 Ga0501072_0025634 Ga0501072_0025634_2113_3318 389
163 3300005355 Ga0070671_100006081 Ga0070671_1000060817 391
164 3300006358 Ga0068871_100184377 Ga0068871_1001843772 391
165 3300025931 Ga0207644_10085728 Ga0207644_100857282 391
166 3300050491 nmdc:mga00v17_100110_c1 nmdc:mga00v17_100110_c1_478_1665 391
167 3300050494 nmdc:mga06z11_71337_c1 nmdc:mga06z11_71337_c1_289_1476 391
168 3300053094 Ga0500566_0000099 Ga0500566_0000099_16704_17939 391
169 3300006038 Ga0075365_10003718 Ga0075365_100037187 392
170 3300006048 Ga0075363_100136774 Ga0075363_1001367742 392
171 3300009148 Ga0105243_10095160 Ga0105243_100951602 392
172 3300009177 Ga0105248_10074958 Ga0105248_100749583 392
173 3300026095 Ga0207676_10208594 Ga0207676_102085942 392
174 3300005330 Ga0070690_100103029 Ga0070690_1001030292 393
175 3300005340 Ga0070689_100062330 Ga0070689_1000623302 393
176 3300005356 Ga0070674_100055299 Ga0070674_1000552993 393
177 3300005459 Ga0068867_100025867 Ga0068867_1000258674 393
178 3300005544 Ga0070686_100011927 Ga0070686_1000119272 393
179 3300005617 Ga0068859_100130447 Ga0068859_1001304472 393
180 3300006237 Ga0097621_100019556 Ga0097621_1000195562 393
181 3300006931 Ga0097620_100130448 Ga0097620_1001304482 393
182 3300009176 Ga0105242_10012056 Ga0105242_100120565 393
183 3300009177 Ga0105248_10121382 Ga0105248_101213823 393
184 3300013297 Ga0157378_10002258 Ga0157378_1000225814 393
185 3300025899 Ga0207642_10014073 Ga0207642_100140734 393
186 3300025938 Ga0207704_10018725 Ga0207704_100187253 393
187 3300025981 Ga0207640_10065293 Ga0207640_100652932 393
188 3300026035 Ga0207703_10026541 Ga0207703_100265414 393
189 3300026089 Ga0207648_10028264 Ga0207648_100282644 393
190 3300048903 Ga0496100_0017223 Ga0496100_0017223_1632_2813 393
191 3300048904 Ga0496101_0022651 Ga0496101_0022651_1860_3041 393
192 3300048905 Ga0496102_0047874 Ga0496102_0047874_2052_3233 393
193 3300048906 Ga0496103_0014389 Ga0496103_0014389_2039_3220 393
194 3300048907 Ga0496104_0035075 Ga0496104_0035075_2119_3300 393
195 3300048908 Ga0496105_0011016 Ga0496105_0011016_4121_5302 393
196 3300048909 Ga0496106_0037656 Ga0496106_0037656_1915_3096 393
197 3300048910 Ga0496107_0053855 Ga0496107_0053855_336_1517 393
198 3300048913 Ga0496110_0019788 Ga0496110_0019788_841_2022 393
199 3300048914 Ga0496111_0012225 Ga0496111_0012225_1311_2492 393
200 3300048917 Ga0496114_0017914 Ga0496114_0017914_1189_2370 393

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04432

FrhB_FdhB_C

Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus

243

394

0.96

PF04422

FrhB_FdhB_N

Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term

158

236

0.94

PF12838

Fer4_7

4Fe-4S dicluster domain

74

130

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5n76-assembly2.cif.gz_C crystal structure of the apo-form of the co dehydrogenase accessory protein coot from rhodospirillum rubrum 0.9164 260 283
4omf-assembly1.cif.gz_B-2 the f420-reducing [nife]-hydrogenase complex from methanothermobacter marburgensis, the first x-ray structure of a group 3 family member 0.8871 108 368
5n76-assembly3.cif.gz_F crystal structure of the apo-form of the co dehydrogenase accessory protein coot from rhodospirillum rubrum 0.8743 260 283
6qgr-assembly1.cif.gz_B the f420-reducing [nife] hydrogenase complex from methanosarcina barkeri at the nia-s state 0.8588 101 368
6qii-assembly1.cif.gz_B xenon derivatization of the f420-reducing [nife] hydrogenase complex from methanosarcina barkeri 0.8563 101 368
ID Description Score Start End Superfamily
af_A1Z6J2_865_1039_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.951 261 283 2.130.10.10
af_A4I5P4_637_851_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.909 261 283 2.130.10.10
af_Q60282_716_812_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.9069 261 283 2.40.128.630
af_Q54U63_2302_2481_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8995 261 283 2.130.10.10
af_Q86TI4_245_352_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.8979 261 285 2.40.128.630
ID Description Score Start End GO Terms
AF-A0A0R2QAS4-F1-model_v4 Oxidoreductase 0.9158 78 387 GO:0052592
AF-A0A7K0VJD5-F1-model_v4 Oxidoreductase 0.9116 274 387 GO:0052592
AF-A0A3C1L5L3-F1-model_v4 Oxidoreductase 0.9061 245 388 GO:0052592
AF-A0A7V9DN48-F1-model_v4 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain 0.9055 168 388 GO:0051536
GO:0052592
AF-A0A0F9CKD8-F1-model_v4 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain-containing protein 0.9038 106 369 GO:0051536
GO:0052592

Feature Viewer

pLDDT pTM Quality
71.93 0.75 High
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Predicted Structure (AlphaFold2)

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