F307643

General Info

Members Datasets Scaffolds Average Seq Length
200 132 400 412

Family's Representative Sequence

Representative Sequence 3300046543|Ga0495645_0000051|Ga0495645_0000051_75658_77013
Length 451
Sequence MNRSHSAKRPAVAAGSSGAGASWTPAQAERHLHSLELFGMRFGLDRMRRMMTALGSPEQRLEAIHVLGTNGKTSTTRMTAAILERHGLRTGVYTSPHLVSYSERVRIGERDLREGEFAAALARAARAAERVNRTLAEDDHVTQFELITAAALSEMAEREVRVAVVEAGLGGRYDATSVIDAPVTVLTNVGLEHTRWLGPTVRDIAEEKLAVVRAGGTLVLGSWLAPEALAVAERVVGEREARIVRVQETPGAVALAARGPFQRRNFALARAAAEIHLRGAGIEPDERAVVAAAAATEVPGRLQVVDERPLTVLDGAHNPDAIEELVRSLPDVLEGREVGLVMGVLEDKDAASMLAVLLPVCRRAWFTAPPSSRALSPAALQSLARQLGFDAVECEPQPGRALERARGWAGESGERRAVLATGSIYLVGDLLRGLGASDTLATQAASQTRAI

Samples

Sample ID Description Type Environment
1 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
47 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
86 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
87 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
91 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
92 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
119 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
120 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
127 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
128 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
129 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
130 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
131 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
132 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.5
Nodule 0
Rhizoplane 18.5
Rhizosphere 79
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495645_0000051 3300046543 Bacteria 87212
2 Ga0070683_100039900 3300005329 Bacteria 4313
3 Ga0068869_100136767 3300005334 Bacteria 1888
4 Ga0068868_100014005 3300005338 Bacteria 5900
5 Ga0068868_100057246 3300005338 Bacteria 3079
6 Ga0070660_100184571 3300005339 Bacteria 1688
7 Ga0070661_100256754 3300005344 Bacteria 1350
8 Ga0070692_10032743 3300005345 Bacteria 2616
9 Ga0070692_10127866 3300005345 Bacteria 1425
10 Ga0070668_100216834 3300005347 Bacteria 1576
11 Ga0070675_100151894 3300005354 Bacteria 1986
12 Ga0070674_100155675 3300005356 Bacteria 1729
13 Ga0070710_10041838 3300005437 Bacteria 2531
14 Ga0070701_10032551 3300005438 Bacteria 2597
15 Ga0070701_10114048 3300005438 Bacteria 1514
16 Ga0070700_100113483 3300005441 Bacteria 1805
17 Ga0070684_100020657 3300005535 Bacteria 5462
18 Ga0070684_100077751 3300005535 Bacteria 2931
19 Ga0070697_100075548 3300005536 Bacteria 2770
20 Ga0070664_100020235 3300005564 Bacteria 5479
21 Ga0068854_100081335 3300005578 Bacteria 2392
22 Ga0070702_100009350 3300005615 Bacteria 4794
23 Ga0068852_100053807 3300005616 Bacteria 3466
24 Ga0068864_100078238 3300005618 Bacteria 2894
25 Ga0068861_100087431 3300005719 Bacteria 2453
26 Ga0068851_10140145 3300005834 Bacteria 1315
27 Ga0068870_10055116 3300005840 Bacteria 2117
28 Ga0068858_100149289 3300005842 Bacteria 2197
29 Ga0081538_10001570 3300005981 Bacteria 23447
30 Ga0081539_10004276 3300005985 Bacteria 16023
31 Ga0081539_10008919 3300005985 Bacteria 8555
32 Ga0081539_10076727 3300005985 Bacteria 1770
33 Ga0070712_100037481 3300006175 Bacteria 3306
34 Ga0070712_100059145 3300006175 Bacteria 2697
35 Ga0070712_100061812 3300006175 Bacteria 2647
36 Ga0075430_100046527 3300006846 Bacteria 3664
37 Ga0068865_100051577 3300006881 Bacteria 2848
38 Ga0075435_100155675 3300007076 Bacteria 1923
39 Ga0105245_10037098 3300009098 Bacteria 4332
40 Ga0105245_10073613 3300009098 Bacteria 3107
41 Ga0105245_10266398 3300009098 Bacteria 1669
42 Ga0105245_10295883 3300009098 Bacteria 1587
43 Ga0105243_10116002 3300009148 Bacteria 2249
44 Ga0105243_10261849 3300009148 Bacteria 1549
45 Ga0105248_10384731 3300009177 Bacteria 1580
46 Ga0105237_10002976 3300009545 Bacteria 20479
47 Ga0105238_10116759 3300009551 Bacteria 2648
48 Ga0105249_10105984 3300009553 Bacteria 2651
49 Ga0105249_10357395 3300009553 Bacteria 1481
50 Ga0105239_10091695 3300010375 Bacteria 3353
51 Ga0105246_10078243 3300011119 Bacteria 2348
52 Ga0157378_10219534 3300013297 Bacteria 1807
53 Ga0163162_10115678 3300013306 Bacteria 2782
54 Ga0157372_10137239 3300013307 Bacteria 2817
55 Ga0163163_10075305 3300014325 Bacteria 3369
56 Ga0157380_10027081 3300014326 Bacteria 4357
57 Ga0157380_10125544 3300014326 Bacteria 2181
58 Ga0157380_10138807 3300014326 Bacteria 2085
59 Ga0157377_10110253 3300014745 Bacteria 1653
60 Ga0157377_10127248 3300014745 Bacteria 1551
61 Ga0157379_10292183 3300014968 Bacteria 1484
62 Ga0207426_1026596 3300025302 Bacteria 1936
63 Ga0207656_10046016 3300025321 Bacteria 1870
64 Ga0207692_10064896 3300025898 Bacteria 1903
65 Ga0207642_10053144 3300025899 Bacteria 1842
66 Ga0207688_10009052 3300025901 Bacteria 5420
67 Ga0207688_10071530 3300025901 Bacteria 1969
68 Ga0207688_10073740 3300025901 Bacteria 1941
69 Ga0207643_10019534 3300025908 Bacteria 3714
70 Ga0207695_10026293 3300025913 Bacteria 6496
71 Ga0207671_10009788 3300025914 Bacteria 7976
72 Ga0207693_10051710 3300025915 Bacteria 3223
73 Ga0207693_10073643 3300025915 Bacteria 2674
74 Ga0207693_10074858 3300025915 Bacteria 2651
75 Ga0207657_10042030 3300025919 Bacteria 4037
76 Ga0207657_10139858 3300025919 Bacteria 1978
77 Ga0207649_10163086 3300025920 Bacteria 1546
78 Ga0207649_10176399 3300025920 Bacteria 1493
79 Ga0207681_10038037 3300025923 Bacteria 3185
80 Ga0207687_10026052 3300025927 Bacteria 3915
81 Ga0207700_10015153 3300025928 Bacteria 5074
82 Ga0207690_10095885 3300025932 Bacteria 2108
83 Ga0207706_10112230 3300025933 Bacteria 2398
84 Ga0207679_10005213 3300025945 Bacteria 8148
85 Ga0207651_10297569 3300025960 Bacteria 1341
86 Ga0207712_10014237 3300025961 Bacteria 5110
87 Ga0207668_10123173 3300025972 Bacteria 1967
88 Ga0207668_10152893 3300025972 Bacteria 1789
89 Ga0207677_10184394 3300026023 Bacteria 1644
90 Ga0207703_10079930 3300026035 Bacteria 2722
91 Ga0207708_10005299 3300026075 Bacteria 9497
92 Ga0207648_10051841 3300026089 Bacteria 3587
93 Ga0207648_10090334 3300026089 Bacteria 2676
94 Ga0207675_100037921 3300026118 Bacteria 4497
95 Ga0207675_100121447 3300026118 Bacteria 2472
96 Ga0207683_10123243 3300026121 Bacteria 2328
97 Ga0207683_10179914 3300026121 Bacteria 1917
98 Ga0268266_10023812 3300028379 Bacteria 5212
99 Ga0268265_10166465 3300028380 Bacteria 1879
100 Ga0265338_10042808 3300028800 Bacteria 4210
101 Ga0265327_10017808 3300031251 Bacteria 4433
102 Ga0265327_10024570 3300031251 Bacteria 3536
103 Ga0307408_100076519 3300031548 Bacteria 2490
104 Ga0307410_10033619 3300031852 Bacteria 3312
105 Ga0307409_100004125 3300031995 Bacteria 8086
106 Ga0307409_100128730 3300031995 Bacteria 2159
107 Ga0307416_100010376 3300032002 Bacteria 6149
108 Ga0307416_100035521 3300032002 Bacteria 3808
109 Ga0307416_100087433 3300032002 Bacteria 2661
110 Ga0307415_100000977 3300032126 Bacteria 13138
111 Ga0395900_0061534 3300037418 Bacteria 3860
112 Ga0395900_0317825 3300037418 Bacteria 1538
113 Ga0395898_0173034 3300037466 Bacteria 2064
114 Ga0395901_0140386 3300038443 Bacteria 2539
115 Ga0395901_0397596 3300038443 Bacteria 1416
116 Ga0466963_0086913 3300044694 Bacteria 2125
117 Ga0466963_0104136 3300044694 Bacteria 1944
118 Ga0466963_0148311 3300044694 Bacteria 1628
119 Ga0466963_0157187 3300044694 Bacteria 1581
120 Ga0466964_0051036 3300044706 Bacteria 1698
121 Ga0466971_0018287 3300044719 Bacteria 3104
122 Ga0466960_0039787 3300044901 Bacteria 2219
123 Ga0466960_0121793 3300044901 Bacteria 1367
124 Ga0466967_0034620 3300045976 Bacteria 4289
125 Ga0466967_0038718 3300045976 Bacteria 4091
126 Ga0466967_0062925 3300045976 Bacteria 3295
127 Ga0466967_0089313 3300045976 Bacteria 2798
128 Ga0466967_0116084 3300045976 Bacteria 2466
129 Ga0466967_0177164 3300045976 Bacteria 2009
130 Ga0495651_0178933 3300046462 Bacteria 1503
131 Ga0495650_0000301 3300046471 Bacteria 89841
132 Ga0495664_0000063 3300046477 Bacteria 51031
133 Ga0495618_0000113 3300046514 Bacteria 59243
134 Ga0495630_0002179 3300046517 Bacteria 13645
135 Ga0495652_0133438 3300046529 Bacteria 1962
136 Ga0495645_0000063 3300046543 Bacteria 74741
137 Ga0495657_0000013 3300046675 Bacteria 195590
138 Ga0495604_0011427 3300047317 Bacteria 7048
139 Ga0495676_0013956 3300047321 Bacteria 7200
140 Ga0496100_0000232 3300048903 Bacteria 29427
141 Ga0496100_0001802 3300048903 Bacteria 10693
142 Ga0496101_0007610 3300048904 Bacteria 7035
143 Ga0496102_0000002 3300048905 Bacteria 814588
144 Ga0496102_0020881 3300048905 Bacteria 5789
145 Ga0496102_0140239 3300048905 Bacteria 2266
146 Ga0496102_0246444 3300048905 Bacteria 1685
147 Ga0496103_0000066 3300048906 Bacteria 126247
148 Ga0496104_0000174 3300048907 Bacteria 57056
149 Ga0496104_0008330 3300048907 Bacteria 9208
150 Ga0496104_0171900 3300048907 Bacteria 2078
151 Ga0496105_0032383 3300048908 Bacteria 4289
152 Ga0496105_0109047 3300048908 Bacteria 2285
153 Ga0496106_0001346 3300048909 Bacteria 18420
154 Ga0496107_0006545 3300048910 Bacteria 8014
155 Ga0496107_0016028 3300048910 Bacteria 5258
156 Ga0496107_0100780 3300048910 Bacteria 2117
157 Ga0496108_0000293 3300048911 Bacteria 43066
158 Ga0496108_0028386 3300048911 Bacteria 4629
159 Ga0496108_0096853 3300048911 Bacteria 2514
160 Ga0496109_0006418 3300048912 Bacteria 9903
161 Ga0496109_0025536 3300048912 Bacteria 5265
162 Ga0496109_0061085 3300048912 Bacteria 3444
163 Ga0496109_0168706 3300048912 Bacteria 2053
164 Ga0496110_0000040 3300048913 Bacteria 62867
165 Ga0496110_0084868 3300048913 Bacteria 2827
166 Ga0496110_0158886 3300048913 Bacteria 2048
167 Ga0496111_0004040 3300048914 Bacteria 9213
168 Ga0496111_0061283 3300048914 Bacteria 2727
169 Ga0496111_0117792 3300048914 Bacteria 1960
170 Ga0496112_0006614 3300048915 Bacteria 10205
171 Ga0496112_0031842 3300048915 Bacteria 5117
172 Ga0496112_0195502 3300048915 Bacteria 1983
173 Ga0496112_0342109 3300048915 Bacteria 1439
174 Ga0496115_0000067 3300048918 Bacteria 94753
175 Ga0496115_0000448 3300048918 Bacteria 33140
176 Ga0496115_0016134 3300048918 Bacteria 5681
177 Ga0501031_0011691 3300049568 Bacteria 5725
178 Ga0501032_0010012 3300049569 Bacteria 6845
179 Ga0501034_0008560 3300049571 Bacteria 10801
180 Ga0501038_0013030 3300049574 Bacteria 7582
181 Ga0501039_0025342 3300049575 Bacteria 4556
182 Ga0501042_0013882 3300049578 Bacteria 5488
183 Ga0501042_0014601 3300049578 Bacteria 5364
184 Ga0501067_0013179 3300049583 Bacteria 4577
185 Ga0501071_0040061 3300049587 Bacteria 3353
186 Ga0501074_0015656 3300049590 Bacteria 5513
187 Ga0501044_0115514 3300049823 Bacteria 2689
188 Ga0501045_0118143 3300049824 Bacteria 1968
189 nmdc:mga0qj67_55163_c1 3300050509 Bacteria 3148
190 nmdc:mga08y16_166441_c1 3300050511 Bacteria 2290
191 nmdc:mga0rr50_58469_c1 3300050513 Bacteria 2889
192 Ga0495601_0000852 3300053077 Bacteria 16593
193 Ga0495612_0000072 3300053078 Bacteria 45740
194 Ga0500556_0000323 3300053104 Bacteria 35964
195 Ga0500616_0005396 3300053153 Bacteria 8679
196 Ga0500616_0006053 3300053153 Bacteria 8026
197 Ga0500599_008565 3300053736 Bacteria 1330
198 Ga0501084_0025604 3300054114 Bacteria 4921
199 Ga0466962_0022413 3300061719 Bacteria 3034
200 Ga0466962_0030607 3300061719 Bacteria 2578
201 Ga0495645_0000051
202 Ga0070683_100039900
203 Ga0068869_100136767
204 Ga0068868_100014005
205 Ga0068868_100057246
206 Ga0070660_100184571
207 Ga0070661_100256754
208 Ga0070692_10032743
209 Ga0070692_10127866
210 Ga0070668_100216834
211 Ga0070675_100151894
212 Ga0070674_100155675
213 Ga0070710_10041838
214 Ga0070701_10032551
215 Ga0070701_10114048
216 Ga0070700_100113483
217 Ga0070684_100020657
218 Ga0070684_100077751
219 Ga0070697_100075548
220 Ga0070664_100020235
221 Ga0068854_100081335
222 Ga0070702_100009350
223 Ga0068852_100053807
224 Ga0068864_100078238
225 Ga0068861_100087431
226 Ga0068851_10140145
227 Ga0068870_10055116
228 Ga0068858_100149289
229 Ga0081538_10001570
230 Ga0081539_10004276
231 Ga0081539_10008919
232 Ga0081539_10076727
233 Ga0070712_100037481
234 Ga0070712_100059145
235 Ga0070712_100061812
236 Ga0075430_100046527
237 Ga0068865_100051577
238 Ga0075435_100155675
239 Ga0105245_10037098
240 Ga0105245_10073613
241 Ga0105245_10266398
242 Ga0105245_10295883
243 Ga0105243_10116002
244 Ga0105243_10261849
245 Ga0105248_10384731
246 Ga0105237_10002976
247 Ga0105238_10116759
248 Ga0105249_10105984
249 Ga0105249_10357395
250 Ga0105239_10091695
251 Ga0105246_10078243
252 Ga0157378_10219534
253 Ga0163162_10115678
254 Ga0157372_10137239
255 Ga0163163_10075305
256 Ga0157380_10027081
257 Ga0157380_10125544
258 Ga0157380_10138807
259 Ga0157377_10110253
260 Ga0157377_10127248
261 Ga0157379_10292183
262 Ga0207426_1026596
263 Ga0207656_10046016
264 Ga0207692_10064896
265 Ga0207642_10053144
266 Ga0207688_10009052
267 Ga0207688_10071530
268 Ga0207688_10073740
269 Ga0207643_10019534
270 Ga0207695_10026293
271 Ga0207671_10009788
272 Ga0207693_10051710
273 Ga0207693_10073643
274 Ga0207693_10074858
275 Ga0207657_10042030
276 Ga0207657_10139858
277 Ga0207649_10163086
278 Ga0207649_10176399
279 Ga0207681_10038037
280 Ga0207687_10026052
281 Ga0207700_10015153
282 Ga0207690_10095885
283 Ga0207706_10112230
284 Ga0207679_10005213
285 Ga0207651_10297569
286 Ga0207712_10014237
287 Ga0207668_10123173
288 Ga0207668_10152893
289 Ga0207677_10184394
290 Ga0207703_10079930
291 Ga0207708_10005299
292 Ga0207648_10051841
293 Ga0207648_10090334
294 Ga0207675_100037921
295 Ga0207675_100121447
296 Ga0207683_10123243
297 Ga0207683_10179914
298 Ga0268266_10023812
299 Ga0268265_10166465
300 Ga0265338_10042808
301 Ga0265327_10017808
302 Ga0265327_10024570
303 Ga0307408_100076519
304 Ga0307410_10033619
305 Ga0307409_100004125
306 Ga0307409_100128730
307 Ga0307416_100010376
308 Ga0307416_100035521
309 Ga0307416_100087433
310 Ga0307415_100000977
311 Ga0395900_0061534
312 Ga0395900_0317825
313 Ga0395898_0173034
314 Ga0395901_0140386
315 Ga0395901_0397596
316 Ga0466963_0086913
317 Ga0466963_0104136
318 Ga0466963_0148311
319 Ga0466963_0157187
320 Ga0466964_0051036
321 Ga0466971_0018287
322 Ga0466960_0039787
323 Ga0466960_0121793
324 Ga0466967_0034620
325 Ga0466967_0038718
326 Ga0466967_0062925
327 Ga0466967_0089313
328 Ga0466967_0116084
329 Ga0466967_0177164
330 Ga0495651_0178933
331 Ga0495650_0000301
332 Ga0495664_0000063
333 Ga0495618_0000113
334 Ga0495630_0002179
335 Ga0495652_0133438
336 Ga0495645_0000063
337 Ga0495657_0000013
338 Ga0495604_0011427
339 Ga0495676_0013956
340 Ga0496100_0000232
341 Ga0496100_0001802
342 Ga0496101_0007610
343 Ga0496102_0000002
344 Ga0496102_0020881
345 Ga0496102_0140239
346 Ga0496102_0246444
347 Ga0496103_0000066
348 Ga0496104_0000174
349 Ga0496104_0008330
350 Ga0496104_0171900
351 Ga0496105_0032383
352 Ga0496105_0109047
353 Ga0496106_0001346
354 Ga0496107_0006545
355 Ga0496107_0016028
356 Ga0496107_0100780
357 Ga0496108_0000293
358 Ga0496108_0028386
359 Ga0496108_0096853
360 Ga0496109_0006418
361 Ga0496109_0025536
362 Ga0496109_0061085
363 Ga0496109_0168706
364 Ga0496110_0000040
365 Ga0496110_0084868
366 Ga0496110_0158886
367 Ga0496111_0004040
368 Ga0496111_0061283
369 Ga0496111_0117792
370 Ga0496112_0006614
371 Ga0496112_0031842
372 Ga0496112_0195502
373 Ga0496112_0342109
374 Ga0496115_0000067
375 Ga0496115_0000448
376 Ga0496115_0016134
377 Ga0501031_0011691
378 Ga0501032_0010012
379 Ga0501034_0008560
380 Ga0501038_0013030
381 Ga0501039_0025342
382 Ga0501042_0013882
383 Ga0501042_0014601
384 Ga0501067_0013179
385 Ga0501071_0040061
386 Ga0501074_0015656
387 Ga0501044_0115514
388 Ga0501045_0118143
389 nmdc:mga0qj67_55163_c1
390 nmdc:mga08y16_166441_c1
391 nmdc:mga0rr50_58469_c1
392 Ga0495601_0000852
393 Ga0495612_0000072
394 Ga0500556_0000323
395 Ga0500616_0005396
396 Ga0500616_0006053
397 Ga0500599_008565
398 Ga0501084_0025604
399 Ga0466962_0022413
400 Ga0466962_0030607

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

300

424

0.89

PF08245

Mur_ligase_M

Mur ligase middle domain

66

220

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vos-assembly1.cif.gz_A mycobacterium tuberculosis folylpolyglutamate synthase complexed with adp 0.8962 5 406
2vor-assembly1.cif.gz_A crystal structures of mycobacterium tuberculosis folylpolyglutamate synthase complexed with adp and amppcp 0.8785 4 405
1w78-assembly1.cif.gz_A e.coli folc in complex with dhpp and adp 0.8696 2 406
3n2a-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase from yersinia pestis co92 0.8694 2 405
1w7k-assembly1.cif.gz_A e.coli folc in complex with adp, without folate substrate 0.8678 4 406
ID Description Score Start End Superfamily
3n2aA02 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.945 278 405 3.90.190.20
af_K7M5A2_13_301_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9154 6 249 3.40.1190.10
2vorA02 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9115 278 406 3.90.190.20
af_F1Q7N0_41_326_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9045 2 251 3.40.1190.10
af_Q54CY5_85_375_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9032 24 247 3.40.1190.10
ID Description Score Start End GO Terms
AF-A0A6V8PPJ8-F1-model_v4 Dihydrofolate synthase / folylpolyglutamate synthase 0.9736 24 193 GO:0004326
GO:0005524
GO:0005737
GO:0008841
AF-A0A7C6XRA7-F1-model_v4 Mur ligase central domain-containing protein 0.9715 5 191 GO:0004326
GO:0005524
GO:0005737
GO:0008841
AF-A0A7W1NHW6-F1-model_v4 deleted 0.9695 4 224
AF-A0A4Y8ZA53-F1-model_v4 deleted 0.966 19 215
AF-A0A838V4Q3-F1-model_v4 Dihydrofolate synthase 0.9653 1 208 GO:0004326
GO:0005524
GO:0005737
GO:0008841

Map