F308227

General Info

Members Datasets Scaffolds Average Seq Length
201 154 200 499

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10052379|Ga0070681_100523792
Length 511
Sequence MTARILIVDDDPVQRRLLDNMVRKFGHDPVLADGGEQATALLAGGEHFDCIVLDLVMPDLDGLGVLARMRESGSTVPVIVQTAHGGIDNVVSVMRAGAVDFAVKPVSPERLQVSIANALEKSALEHEISRIKRSRSGTLTFKDIVTRSPRMLEVLRTAGKASASIIPVLVEGESGVGKELIARAIHGQSGRRSKPFVAVNCGAIPEHLVESILFGHEKGAFTGATERHIGKFVEASGGTLFLDEVGELPPAAQVKLLRALQEGEVEPVGGRRPVPVDVRVISATNRNLAADVRSGRFREDLFYRLHVFPISVPPLRERAEDIQDLVRHFLARIAAEEGKRVRAISSEALVLLGRHRWPGNVRQLENAIFRAVVLADSDSIGLNEFPQIAAQATGGLEAHAAAPSIQPAPAEPSVHRPAPVMIEIPPPFDIGHGLTSSGPASIGMLDERGEVRPLEAIETDAIRFAIAHYHGQMSEVARRLQIGRSTLYRKLEHLGLGERSESEHGESAETT

Samples

Sample ID Description Type Environment
1 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
23 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
41 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
42 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
56 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
57 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
58 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
63 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
64 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
65 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
66 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
67 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
69 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
70 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
71 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
72 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
73 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
74 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
75 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
76 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
89 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
90 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
91 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
92 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
99 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
106 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
115 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
153 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.5
Metatranscriptomes 0
Isolates 0.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.48
Nodule 0
Rhizoplane 11.94
Rhizosphere 79.1
Stem 0
Stem Tuber 0
Unclassified 5.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10007940 3300003215 Bacteria 5143
2 JGI25153J46596_10023890 3300003215 Bacteria 2216
3 Ga0070680_100017834 3300005336 Bacteria 5600
4 Ga0068868_100040741 3300005338 Bacteria 3616
5 Ga0070671_100075035 3300005355 Bacteria 2825
6 Ga0070673_100070761 3300005364 Bacteria 2801
7 Ga0070713_100037571 3300005436 Bacteria 3916
8 Ga0070713_100182336 3300005436 Bacteria 1887
9 Ga0070710_10020902 3300005437 Bacteria 3402
10 Ga0070705_100008251 3300005440 Bacteria 5155
11 Ga0070700_100018835 3300005441 Bacteria 3975
12 Ga0070681_10052379 3300005458 Bacteria 4070
13 Ga0070679_100006909 3300005530 Bacteria 10585
14 Ga0070679_100061332 3300005530 Bacteria 3748
15 Ga0070679_100061500 3300005530 Bacteria 3743
16 Ga0070697_100000500 3300005536 Bacteria 29734
17 Ga0070695_100002429 3300005545 Bacteria 10708
18 Ga0070696_100002378 3300005546 Bacteria 12450
19 Ga0068855_100059318 3300005563 Bacteria 4477
20 Ga0068857_100053319 3300005577 Bacteria 3588
21 Ga0068856_100183025 3300005614 Bacteria 2109
22 Ga0068859_100041249 3300005617 Bacteria 4636
23 Ga0081455_10000402 3300005937 Bacteria 57123
24 Ga0081539_10068171 3300005985 Bacteria 1921
25 Ga0075368_10016176 3300006042 Bacteria 2778
26 Ga0070715_10001032 3300006163 Bacteria 7857
27 Ga0075366_10021276 3300006195 Bacteria 3770
28 Ga0075434_100141769 3300006871 Bacteria 2423
29 Ga0075436_100003257 3300006914 Bacteria 11117
30 Ga0097620_100041248 3300006931 Bacteria 4636
31 Ga0075435_100042479 3300007076 Bacteria 3637
32 Ga0075435_100056729 3300007076 Bacteria 3167
33 Ga0105240_10059824 3300009093 Bacteria 4752
34 Ga0105245_10002241 3300009098 Bacteria 17507
35 Ga0105247_10034355 3300009101 Bacteria 3088
36 Ga0105238_10035189 3300009551 Bacteria 5093
37 Ga0105249_10002317 3300009553 Bacteria 16530
38 Ga0157370_10017611 3300013104 Bacteria 7205
39 Ga0157372_10090773 3300013307 Bacteria 3474
40 Ga0163163_10003491 3300014325 Bacteria 13345
41 Ga0213874_10013344 3300021377 Bacteria 2127
42 Ga0213876_10017990 3300021384 Bacteria 3729
43 Ga0213875_10000033 3300021388 Bacteria 170944
44 Ga0224572_1000122 3300024225 Bacteria 6303
45 Ga0209758_1000382 3300025297 Bacteria 76653
46 Ga0207682_10037521 3300025893 Bacteria 1963
47 Ga0207688_10073919 3300025901 Bacteria 1938
48 Ga0207695_10215920 3300025913 Bacteria 1827
49 Ga0207660_10004933 3300025917 Bacteria 8694
50 Ga0207660_10017176 3300025917 Bacteria 4802
51 Ga0207657_10023047 3300025919 Bacteria 5807
52 Ga0207652_10132332 3300025921 Bacteria 2225
53 Ga0207687_10049285 3300025927 Bacteria 2928
54 Ga0207665_10062543 3300025939 Bacteria 2526
55 Ga0207651_10039501 3300025960 Bacteria 3113
56 Ga0207712_10001628 3300025961 Bacteria 15134
57 Ga0207658_10088238 3300025986 Bacteria 2397
58 Ga0207708_10027722 3300026075 Bacteria 4289
59 Ga0207683_10082255 3300026121 Bacteria 2860
60 Ga0265332_10005938 3300031238 Bacteria 5582
61 Ga0265328_10000029 3300031239 Bacteria 111054
62 Ga0265328_10003237 3300031239 Bacteria 7217
63 Ga0265328_10003630 3300031239 Bacteria 6809
64 Ga0265328_10003923 3300031239 Bacteria 6540
65 Ga0265325_10000280 3300031241 Bacteria 36085
66 Ga0265329_10016374 3300031242 Bacteria 2570
67 Ga0265340_10002934 3300031247 Bacteria 9713
68 Ga0265340_10021602 3300031247 Bacteria 3301
69 Ga0265340_10039999 3300031247 Bacteria 2310
70 Ga0265339_10004357 3300031249 Bacteria 9662
71 Ga0265331_10000231 3300031250 Bacteria 67286
72 Ga0265327_10006197 3300031251 Bacteria 9646
73 Ga0265327_10018129 3300031251 Bacteria 4377
74 Ga0265316_10003353 3300031344 Bacteria 16235
75 Ga0265316_10131724 3300031344 Bacteria 1883
76 Ga0265313_10000393 3300031595 Bacteria 46911
77 Ga0265342_10003280 3300031712 Bacteria 13413
78 Ga0373923_0020176 3300035111 Bacteria 2586
79 Ga0373936_0008813 3300035113 Bacteria 3800
80 Ga0373936_0026861 3300035113 Bacteria 2257
81 Ga0373939_0002366 3300035114 Bacteria 4456
82 Ga0373939_0007840 3300035114 Bacteria 2602
83 Ga0373939_0022319 3300035114 Bacteria 1743
84 Ga0373953_0024934 3300035117 Bacteria 2279
85 Ga0373954_0011092 3300035118 Bacteria 3987
86 Ga0373943_0004836 3300035170 Bacteria 6089
87 Ga0373946_0002763 3300035171 Bacteria 6205
88 Ga0373955_0009460 3300035172 Bacteria 4564
89 Ga0373931_0000416 3300035691 Bacteria 17409
90 Ga0373935_0006711 3300035692 Bacteria 6878
91 Ga0373935_0018668 3300035692 Bacteria 4223
92 Ga0373935_0048737 3300035692 Bacteria 2683
93 Ga0373927_0008825 3300035695 Bacteria 6772
94 Ga0373937_0001128 3300036401 Bacteria 22475
95 Ga0373925_0196096 3300037068 Bacteria 1604
96 Ga0436364_0820133 3300037853 Bacteria 27662
97 Ga0436364_1296047 3300037853 Bacteria 3079
98 Ga0436365_0903011 3300039437 Bacteria 3193
99 Ga0436365_0923508 3300039437 Bacteria 9275
100 Ga0436365_1803281 3300039437 Bacteria 3800
101 Ga0436363_0040681 3300039450 Bacteria 4007
102 Ga0436363_0695146 3300039450 Bacteria 6542
103 Ga0436363_1691909 3300039450 Bacteria 1697
104 Ga0450923_010081 3300042125 Bacteria 1668
105 Ga0466966_0009761 3300044684 Bacteria 6361
106 Ga0466971_0067240 3300044719 Bacteria 1624
107 Ga0466959_0024956 3300045049 Bacteria 4428
108 Ga0495592_0027278 3300046454 Bacteria 4331
109 Ga0495629_0015333 3300046459 Bacteria 5504
110 Ga0495629_0064148 3300046459 Bacteria 2565
111 Ga0495653_0015595 3300046463 Bacteria 6194
112 Ga0495653_0035100 3300046463 Bacteria 3960
113 Ga0495582_0005869 3300046473 Bacteria 6842
114 Ga0495664_0010996 3300046477 Bacteria 5093
115 Ga0495585_0002116 3300046492 Bacteria 14511
116 Ga0495607_0026720 3300046501 Bacteria 3579
117 Ga0495608_0012140 3300046511 Bacteria 5988
118 Ga0495628_0071100 3300046516 Bacteria 2713
119 Ga0495663_0008884 3300046525 Bacteria 2787
120 Ga0495652_0023804 3300046529 Bacteria 5426
121 Ga0495652_0069791 3300046529 Bacteria 2940
122 Ga0495640_0042504 3300046533 Bacteria 3170
123 Ga0495598_0001570 3300046537 Bacteria 4578
124 Ga0495622_0004978 3300046557 Bacteria 6153
125 Ga0495667_0016124 3300046559 Bacteria 5048
126 Ga0495634_0019636 3300046642 Bacteria 4800
127 Ga0495634_0020461 3300046642 Bacteria 4692
128 Ga0495635_0038465 3300046663 Bacteria 3312
129 Ga0495588_0002506 3300046674 Bacteria 7866
130 Ga0495657_0035995 3300046675 Bacteria 3426
131 Ga0495599_0038266 3300046678 Bacteria 3014
132 Ga0495646_0003085 3300046680 Bacteria 10335
133 Ga0495613_0052471 3300046689 Bacteria 3003
134 Ga0495613_0101767 3300046689 Bacteria 2075
135 Ga0495670_0001218 3300046691 Bacteria 12516
136 Ga0495600_0137515 3300046809 Bacteria 1586
137 Ga0495604_0025542 3300047317 Bacteria 4706
138 Ga0495674_0009532 3300047319 Bacteria 9223
139 Ga0495674_0055814 3300047319 Bacteria 3462
140 Ga0495675_0072074 3300047444 Bacteria 2180
141 Ga0495684_0003534 3300047471 Bacteria 12230
142 Ga0495602_0065532 3300048088 Bacteria 3135
143 Ga0496100_0000936 3300048903 Bacteria 13936
144 Ga0496101_0001406 3300048904 Bacteria 14407
145 Ga0496101_0028719 3300048904 Bacteria 3886
146 Ga0496103_0119298 3300048906 Bacteria 1679
147 Ga0496104_0000948 3300048907 Bacteria 24943
148 Ga0496104_0034989 3300048907 Bacteria 4687
149 Ga0496105_0002256 3300048908 Bacteria 13967
150 Ga0496106_0006550 3300048909 Bacteria 8624
151 Ga0496107_0010746 3300048910 Bacteria 6367
152 Ga0496108_0000479 3300048911 Bacteria 32030
153 Ga0496108_0025129 3300048911 Bacteria 4907
154 Ga0496109_0010774 3300048912 Bacteria 7826
155 Ga0496109_0048830 3300048912 Bacteria 3850
156 Ga0496110_0001939 3300048913 Bacteria 15333
157 Ga0496111_0000112 3300048914 Bacteria 35886
158 Ga0496111_0009679 3300048914 Bacteria 6442
159 Ga0496112_0042183 3300048915 Bacteria 4463
160 Ga0496112_0049775 3300048915 Bacteria 4107
161 Ga0496112_0239022 3300048915 Bacteria 1769
162 Ga0496113_0004479 3300048916 Bacteria 8595
163 Ga0496114_0011687 3300048917 Bacteria 7019
164 Ga0496115_0003984 3300048918 Bacteria 10651
165 Ga0496115_0069888 3300048918 Bacteria 2845
166 Ga0496115_0080903 3300048918 Bacteria 2645
167 Ga0501031_0024699 3300049568 Bacteria 3918
168 Ga0501032_0095517 3300049569 Bacteria 1970
169 Ga0501033_0028729 3300049570 Bacteria 4178
170 Ga0501034_0000438 3300049571 Bacteria 68973
171 Ga0501034_0048189 3300049571 Bacteria 4301
172 Ga0501036_0182704 3300049572 Bacteria 1765
173 Ga0501037_0018532 3300049573 Bacteria 5131
174 Ga0501039_0004634 3300049575 Bacteria 10395
175 Ga0501046_0001870 3300049580 Bacteria 20037
176 Ga0501047_0062280 3300049581 Bacteria 3598
177 Ga0501047_0106899 3300049581 Bacteria 2679
178 Ga0501048_0005276 3300049582 Bacteria 9843
179 Ga0501069_0004852 3300049585 Bacteria 6965
180 Ga0501070_0033213 3300049586 Bacteria 4317
181 Ga0501073_0014108 3300049589 Bacteria 5805
182 Ga0501077_0078627 3300049593 Bacteria 2090
183 Ga0501083_0014425 3300049744 Bacteria 5524
184 Ga0501044_0001788 3300049823 Bacteria 25106
185 Ga0501044_0051094 3300049823 Bacteria 4263
186 Ga0501044_0130881 3300049823 Bacteria 2503
187 nmdc:mga0n895_107741_c1 3300050512 Bacteria 2800
188 nmdc:mga0rr50_40611_c1 3300050513 Bacteria 3384
189 nmdc:mga08x19_6_c1 3300050514 Bacteria 405679
190 Ga0495601_0005372 3300053077 Bacteria 7463
191 Ga0495601_0010671 3300053077 Bacteria 5477
192 Ga0495595_0025026 3300053084 Bacteria 2640
193 Ga0495595_0050198 3300053084 Bacteria 1931
194 Ga0495619_0000318 3300053085 Bacteria 33725
195 Ga0495619_0014782 3300053085 Bacteria 4931
196 Ga0495619_0052809 3300053085 Bacteria 2687
197 Ga0495619_0125451 3300053085 Bacteria 1762
198 Ga0500651_0037589 3300053093 Bacteria 3051
199 Ga0500577_0003375 3300053142 Bacteria 4147
200 Ga0501082_0137924 3300060353 Bacteria 2117

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048906 Ga0496103_0119298 Ga0496103_0119298_307_1668 435
2 3300035114 Ga0373939_0022319 Ga0373939_0022319_313_1722 451
3 3300046809 Ga0495600_0137515 Ga0495600_0137515_66_1568 451
4 3300053077 Ga0495601_0010671 Ga0495601_0010671_3955_5457 451
5 3300013307 Ga0157372_10090773 Ga0157372_100907732 452
6 3300049581 Ga0501047_0062280 Ga0501047_0062280_15_1472 452
7 3300039450 Ga0436363_1691909 Ga0436363_1691909_15_1463 457
8 3300031344 Ga0265316_10131724 Ga0265316_101317241 462
9 3300006195 Ga0075366_10021276 Ga0075366_100212764 464
10 3300031239 Ga0265328_10003923 Ga0265328_100039233 466
11 3300021384 Ga0213876_10017990 Ga0213876_100179902 467
12 3300039437 Ga0436365_1803281 Ga0436365_1803281_561_2099 467
13 3300049571 Ga0501034_0000438 Ga0501034_0000438_7014_8477 467
14 3300005338 Ga0068868_100040741 Ga0068868_1000407411 468
15 3300009098 Ga0105245_10002241 Ga0105245_100022416 468
16 3300009551 Ga0105238_10035189 Ga0105238_100351892 468
17 3300021388 Ga0213875_10000033 Ga0213875_10000033156 468
18 3300025927 Ga0207687_10049285 Ga0207687_100492852 468
19 3300025986 Ga0207658_10088238 Ga0207658_100882382 468
20 3300037853 Ga0436364_0820133 Ga0436364_0820133_19000_20538 468
21 3300005336 Ga0070680_100017834 Ga0070680_1000178343 469
22 3300005563 Ga0068855_100059318 Ga0068855_1000593181 469
23 3300005577 Ga0068857_100053319 Ga0068857_1000533193 469
24 3300013104 Ga0157370_10017611 Ga0157370_100176112 469
25 3300025917 Ga0207660_10017176 Ga0207660_100171762 469
26 3300047444 Ga0495675_0072074 Ga0495675_0072074_171_1730 469
27 3300005437 Ga0070710_10020902 Ga0070710_100209022 470
28 3300006163 Ga0070715_10001032 Ga0070715_100010322 470
29 3300025939 Ga0207665_10062543 Ga0207665_100625432 470
30 3300046459 Ga0495629_0015333 Ga0495629_0015333_365_1924 470
31 3300046463 Ga0495653_0015595 Ga0495653_0015595_3343_4902 470
32 3300046642 Ga0495634_0019636 Ga0495634_0019636_2736_4295 470
33 3300046663 Ga0495635_0038465 Ga0495635_0038465_1686_3245 470
34 3300046675 Ga0495657_0035995 Ga0495657_0035995_1546_3105 470
35 3300046678 Ga0495599_0038266 Ga0495599_0038266_802_2361 470
36 3300046689 Ga0495613_0101767 Ga0495613_0101767_379_1938 470
37 3300047319 Ga0495674_0009532 Ga0495674_0009532_3776_5335 470
38 3300053085 Ga0495619_0125451 Ga0495619_0125451_67_1626 470
39 iso_pu_bacteria 2891088606 2891091964 470
40 3300005436 Ga0070713_100037571 Ga0070713_1000375712 471
41 3300005530 Ga0070679_100006909 Ga0070679_1000069094 471
42 3300005530 Ga0070679_100061500 Ga0070679_1000615002 471
43 3300049570 Ga0501033_0028729 Ga0501033_0028729_977_2494 472
44 3300049572 Ga0501036_0182704 Ga0501036_0182704_61_1578 472
45 3300049573 Ga0501037_0018532 Ga0501037_0018532_82_1596 472
46 3300049823 Ga0501044_0130881 Ga0501044_0130881_612_2129 472
47 3300060353 Ga0501082_0137924 Ga0501082_0137924_90_1607 472
48 3300031241 Ga0265325_10000280 Ga0265325_1000028028 473
49 3300031595 Ga0265313_10000393 Ga0265313_1000039314 473
50 3300009093 Ga0105240_10059824 Ga0105240_100598243 474
51 3300025901 Ga0207688_10073919 Ga0207688_100739191 474
52 3300025913 Ga0207695_10215920 Ga0207695_102159201 474
53 3300031239 Ga0265328_10003237 Ga0265328_100032377 474
54 3300037853 Ga0436364_1296047 Ga0436364_1296047_1533_3008 474
55 3300039437 Ga0436365_0903011 Ga0436365_0903011_711_2201 474
56 3300039437 Ga0436365_0923508 Ga0436365_0923508_1599_3122 474
57 3300039450 Ga0436363_0040681 Ga0436363_0040681_429_1952 474
58 3300048918 Ga0496115_0069888 Ga0496115_0069888_182_1672 474
59 3300053142 Ga0500577_0003375 Ga0500577_0003375_1147_2637 474
60 3300014325 Ga0163163_10003491 Ga0163163_100034919 475
61 3300031239 Ga0265328_10000029 Ga0265328_1000002964 475
62 3300031239 Ga0265328_10003630 Ga0265328_100036303 475
63 3300031242 Ga0265329_10016374 Ga0265329_100163743 475
64 3300031247 Ga0265340_10039999 Ga0265340_100399992 475
65 3300031250 Ga0265331_10000231 Ga0265331_100002314 475
66 3300031251 Ga0265327_10006197 Ga0265327_100061978 475
67 3300031251 Ga0265327_10018129 Ga0265327_100181293 475
68 3300031344 Ga0265316_10003353 Ga0265316_1000335310 475
69 3300039450 Ga0436363_0695146 Ga0436363_0695146_22_1503 475
70 3300048904 Ga0496101_0028719 Ga0496101_0028719_713_2206 475
71 3300048907 Ga0496104_0000948 Ga0496104_0000948_15959_17452 475
72 3300048911 Ga0496108_0000479 Ga0496108_0000479_12883_14376 475
73 3300048912 Ga0496109_0048830 Ga0496109_0048830_90_1583 475
74 3300048913 Ga0496110_0001939 Ga0496110_0001939_13300_14793 475
75 3300048914 Ga0496111_0000112 Ga0496111_0000112_10472_11965 475
76 3300048915 Ga0496112_0042183 Ga0496112_0042183_703_2196 475
77 3300048916 Ga0496113_0004479 Ga0496113_0004479_64_1557 475
78 3300048918 Ga0496115_0080903 Ga0496115_0080903_293_1786 475
79 3300005436 Ga0070713_100182336 Ga0070713_1001823361 477
80 3300021377 Ga0213874_10013344 Ga0213874_100133442 477
81 3300024225 Ga0224572_1000122 Ga0224572_10001223 477
82 3300035111 Ga0373923_0020176 Ga0373923_0020176_882_2354 477
83 3300035113 Ga0373936_0008813 Ga0373936_0008813_1647_3119 477
84 3300035114 Ga0373939_0002366 Ga0373939_0002366_440_1930 477
85 3300035118 Ga0373954_0011092 Ga0373954_0011092_767_2239 477
86 3300035170 Ga0373943_0004836 Ga0373943_0004836_2241_3713 477
87 3300035171 Ga0373946_0002763 Ga0373946_0002763_2886_4358 477
88 3300035172 Ga0373955_0009460 Ga0373955_0009460_2901_4373 477
89 3300035692 Ga0373935_0018668 Ga0373935_0018668_106_1578 477
90 3300035695 Ga0373927_0008825 Ga0373927_0008825_4726_6198 477
91 3300044684 Ga0466966_0009761 Ga0466966_0009761_4784_6292 477
92 3300044719 Ga0466971_0067240 Ga0466971_0067240_72_1580 477
93 3300045049 Ga0466959_0024956 Ga0466959_0024956_1562_3070 477
94 3300046454 Ga0495592_0027278 Ga0495592_0027278_565_2055 477
95 3300046459 Ga0495629_0064148 Ga0495629_0064148_724_2214 477
96 3300046463 Ga0495653_0035100 Ga0495653_0035100_1639_3111 477
97 3300046473 Ga0495582_0005869 Ga0495582_0005869_2419_3891 477
98 3300046477 Ga0495664_0010996 Ga0495664_0010996_2940_4412 477
99 3300046492 Ga0495585_0002116 Ga0495585_0002116_5161_6633 477
100 3300046501 Ga0495607_0026720 Ga0495607_0026720_501_1973 477
101 3300046511 Ga0495608_0012140 Ga0495608_0012140_1639_3111 477
102 3300046525 Ga0495663_0008884 Ga0495663_0008884_1150_2622 477
103 3300046529 Ga0495652_0069791 Ga0495652_0069791_435_1925 477
104 3300046537 Ga0495598_0001570 Ga0495598_0001570_512_1984 477
105 3300046557 Ga0495622_0004978 Ga0495622_0004978_3918_5390 477
106 3300046559 Ga0495667_0016124 Ga0495667_0016124_2753_4225 477
107 3300046642 Ga0495634_0020461 Ga0495634_0020461_2934_4406 477
108 3300046674 Ga0495588_0002506 Ga0495588_0002506_5576_7048 477
109 3300046680 Ga0495646_0003085 Ga0495646_0003085_7035_8507 477
110 3300046689 Ga0495613_0052471 Ga0495613_0052471_732_2204 477
111 3300046691 Ga0495670_0001218 Ga0495670_0001218_10057_11529 477
112 3300047317 Ga0495604_0025542 Ga0495604_0025542_812_2284 477
113 3300047319 Ga0495674_0055814 Ga0495674_0055814_968_2440 477
114 3300047471 Ga0495684_0003534 Ga0495684_0003534_707_2179 477
115 3300048088 Ga0495602_0065532 Ga0495602_0065532_294_1766 477
116 3300053077 Ga0495601_0005372 Ga0495601_0005372_261_1751 477
117 3300053084 Ga0495595_0025026 Ga0495595_0025026_568_2058 477
118 3300053085 Ga0495619_0000318 Ga0495619_0000318_12596_14086 477
119 3300053085 Ga0495619_0014782 Ga0495619_0014782_1950_3422 477
120 3300005546 Ga0070696_100002378 Ga0070696_1000023783 478
121 3300007076 Ga0075435_100056729 Ga0075435_1000567291 478
122 3300046529 Ga0495652_0023804 Ga0495652_0023804_3337_4896 478
123 3300006871 Ga0075434_100141769 Ga0075434_1001417692 479
124 3300009101 Ga0105247_10034355 Ga0105247_100343551 479
125 3300035692 Ga0373935_0006711 Ga0373935_0006711_750_2285 479
126 3300037068 Ga0373925_0196096 Ga0373925_0196096_46_1581 479
127 3300050512 nmdc:mga0n895_107741_c1 nmdc:mga0n895_107741_c1_12_1541 479
128 3300050513 nmdc:mga0rr50_40611_c1 nmdc:mga0rr50_40611_c1_933_2462 479
129 3300005440 Ga0070705_100008251 Ga0070705_1000082512 480
130 3300005536 Ga0070697_100000500 Ga0070697_1000005009 480
131 3300005545 Ga0070695_100002429 Ga0070695_1000024296 480
132 3300005614 Ga0068856_100183025 Ga0068856_1001830251 480
133 3300005937 Ga0081455_10000402 Ga0081455_1000040236 480
134 3300006914 Ga0075436_100003257 Ga0075436_1000032572 480
135 3300007076 Ga0075435_100042479 Ga0075435_1000424792 480
136 3300009553 Ga0105249_10002317 Ga0105249_1000231713 480
137 3300025921 Ga0207652_10132332 Ga0207652_101323322 480
138 3300025961 Ga0207712_10001628 Ga0207712_100016283 480
139 3300049593 Ga0501077_0078627 Ga0501077_0078627_242_1732 480
140 3300050514 nmdc:mga08x19_6_c1 nmdc:mga08x19_6_c1_258361_259890 480
141 3300005364 Ga0070673_100070761 Ga0070673_1000707612 482
142 3300035117 Ga0373953_0024934 Ga0373953_0024934_238_1782 482
143 3300035692 Ga0373935_0048737 Ga0373935_0048737_877_2421 482
144 3300036401 Ga0373937_0001128 Ga0373937_0001128_19268_20812 482
145 3300046533 Ga0495640_0042504 Ga0495640_0042504_230_1774 482
146 3300006042 Ga0075368_10016176 Ga0075368_100161763 483
147 3300031238 Ga0265332_10005938 Ga0265332_100059382 483
148 3300031247 Ga0265340_10002934 Ga0265340_100029342 483
149 3300031249 Ga0265339_10004357 Ga0265339_100043572 483
150 3300031712 Ga0265342_10003280 Ga0265342_1000328011 483
151 3300049581 Ga0501047_0106899 Ga0501047_0106899_538_2061 483
152 3300049744 Ga0501083_0014425 Ga0501083_0014425_395_1918 483
153 3300053093 Ga0500651_0037589 Ga0500651_0037589_112_1638 483
154 3300049568 Ga0501031_0024699 Ga0501031_0024699_740_2257 484
155 3300049569 Ga0501032_0095517 Ga0501032_0095517_53_1570 484
156 3300049575 Ga0501039_0004634 Ga0501039_0004634_5370_6887 484
157 3300049580 Ga0501046_0001870 Ga0501046_0001870_6554_8071 484
158 3300049582 Ga0501048_0005276 Ga0501048_0005276_6126_7643 484
159 3300049585 Ga0501069_0004852 Ga0501069_0004852_3502_5019 484
160 3300049586 Ga0501070_0033213 Ga0501070_0033213_854_2371 484
161 3300049589 Ga0501073_0014108 Ga0501073_0014108_3099_4616 484
162 3300049823 Ga0501044_0051094 Ga0501044_0051094_2112_3629 484
163 3300005458 Ga0070681_10052379 Ga0070681_100523792 485
164 3300005530 Ga0070679_100061332 Ga0070679_1000613323 485
165 3300025917 Ga0207660_10004933 Ga0207660_100049338 485
166 3300025919 Ga0207657_10023047 Ga0207657_100230473 485
167 3300031247 Ga0265340_10021602 Ga0265340_100216022 485
168 3300005985 Ga0081539_10068171 Ga0081539_100681711 486
169 3300042125 Ga0450923_010081 Ga0450923_010081_178_1656 488
170 3300049571 Ga0501034_0048189 Ga0501034_0048189_263_1837 488
171 3300049823 Ga0501044_0001788 Ga0501044_0001788_23186_24760 488
172 3300005355 Ga0070671_100075035 Ga0070671_1000750352 491
173 3300005441 Ga0070700_100018835 Ga0070700_1000188352 491
174 3300005617 Ga0068859_100041249 Ga0068859_1000412493 491
175 3300006931 Ga0097620_100041248 Ga0097620_1000412483 491
176 3300025893 Ga0207682_10037521 Ga0207682_100375211 491
177 3300025960 Ga0207651_10039501 Ga0207651_100395012 491
178 3300026075 Ga0207708_10027722 Ga0207708_100277222 491
179 3300035113 Ga0373936_0026861 Ga0373936_0026861_715_2244 491
180 3300035114 Ga0373939_0007840 Ga0373939_0007840_901_2430 491
181 3300035691 Ga0373931_0000416 Ga0373931_0000416_1135_2664 491
182 3300046516 Ga0495628_0071100 Ga0495628_0071100_339_1868 491
183 3300048903 Ga0496100_0000936 Ga0496100_0000936_7705_9234 491
184 3300048904 Ga0496101_0001406 Ga0496101_0001406_5196_6725 491
185 3300048907 Ga0496104_0034989 Ga0496104_0034989_364_1893 491
186 3300048908 Ga0496105_0002256 Ga0496105_0002256_5956_7485 491
187 3300048909 Ga0496106_0006550 Ga0496106_0006550_4860_6389 491
188 3300048910 Ga0496107_0010746 Ga0496107_0010746_1103_2632 491
189 3300048911 Ga0496108_0025129 Ga0496108_0025129_901_2430 491
190 3300048912 Ga0496109_0010774 Ga0496109_0010774_787_2316 491
191 3300048914 Ga0496111_0009679 Ga0496111_0009679_415_1944 491
192 3300048915 Ga0496112_0049775 Ga0496112_0049775_1418_2947 491
193 3300048915 Ga0496112_0239022 Ga0496112_0239022_108_1637 491
194 3300048917 Ga0496114_0011687 Ga0496114_0011687_2570_4099 491
195 3300048918 Ga0496115_0003984 Ga0496115_0003984_6221_7750 491
196 3300053084 Ga0495595_0050198 Ga0495595_0050198_161_1690 491
197 3300053085 Ga0495619_0052809 Ga0495619_0052809_579_2108 491
198 3300026121 Ga0207683_10082255 Ga0207683_100822551 492
199 3300003215 JGI25153J46596_10007940 JGI25153J46596_100079403 493
200 3300003215 JGI25153J46596_10023890 JGI25153J46596_100238902 493
201 3300025297 Ga0209758_1000382 Ga0209758_100038275 493

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

144

311

0.99

PF00072

Response_reg

Response regulator receiver domain

5

116

0.96

PF02954

HTH_8

Bacterial regulatory protein, Fis family

453

494

0.96

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

145

315

0.88

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

168

305

0.87

PF07728

AAA_5

AAA domain (dynein-related subfamily)

167

297

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6luf-assembly4.cif.gz_D trans-acting mutant y290a of the central aaa+ domain of the flagellar regulatory protein flrc 0.9677 144 385
2zwm-assembly1.cif.gz_B crystal structure of yycf receiver domain from bacillus subtilis 0.9666 3 119
5ep2-assembly1.cif.gz_A quorum-sensing signal integrator luxo - catalytic domain in complex with azau inhibitor 0.9658 144 392
6lua-assembly1.cif.gz_G cis-mutant r349a of the central aaa+ domain of the flagellar regulatory protein flrc 0.9628 144 385
4qhs-assembly1.cif.gz_F crystal structure of aaa+sigma 54 activator domain of the flagellar regulatory protein flrc of vibrio cholerae in nucleotide free state 0.9617 144 385
ID Description Score Start End Superfamily
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9787 144 312 3.40.50.300
af_Q06065_316_382_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9779 316 380 1.10.8.60
4l5eA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9769 441 484 1.10.10.60
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9757 2 83 3.40.50.2300
af_P0DMC5_826_949_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9697 5 121 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3C0A204-F1-model_v4 Response regulatory domain-containing protein 0.9636 3 119 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A496YFC6-F1-model_v4 DNA-binding response regulator 0.9618 1 119 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A415BEV7-F1-model_v4 DNA-binding response regulator 0.9613 4 119 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A5C9AV88-F1-model_v4 Sigma-54-dependent transcriptional regulator 0.9605 145 384 GO:0003677
GO:0005524
GO:0006355
GO:0016887
AF-A0A4T0USA8-F1-model_v4 Response regulator transcription factor 0.9602 3 119 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
83.76 0.64 Medium
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Predicted Structure (AlphaFold2)

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