F308594

General Info

Members Datasets Scaffolds Average Seq Length
201 157 201 238

Family's Representative Sequence

Representative Sequence 3300025922|Ga0207646_10125971|Ga0207646_101259713
Length 276
Sequence LIHERPQGPQHLQAAASRQHLHRTEYKLRVMAPPSAAKRVLVVEDEEAIRQTLRYNLAREGYVVSEAATGSEALSAARTEHPDVIILDVMLPEMSGLEVCRVLRQELTTPILMLTAKGTELDKVVGLQVGADDYVTKPFSLNELMARVNALLRRSEMREHERADTREVEEFGGFRIDRAARTVAVNGSELRLAPKEFDLLSLLLLNAGRVLSRQTIIRDVWGVKFYGDPKTVDVHVRWLREKFEKFEHIPFRITTVFGVGYRLDRLANTAEPGLST

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
35 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
36 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
56 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
57 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
58 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
62 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
63 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
70 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
71 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
72 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
73 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
76 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
77 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
78 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
79 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
86 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
87 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
100 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
101 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
102 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
103 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
104 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
105 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
108 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
109 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
153 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
154 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
155 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
156 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.5
Metatranscriptomes 0.5
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.5
Nodule 0
Rhizoplane 6.47
Rhizosphere 87.56
Stem 0
Stem Tuber 0
Unclassified 5.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10021528 3300002459 Bacteria 1336
2 Ga0070683_100399461 3300005329 Bacteria 1311
3 Ga0068868_100000229 3300005338 Bacteria 38071
4 Ga0070671_100503894 3300005355 Bacteria 1041
5 Ga0070673_100204421 3300005364 Bacteria 1702
6 Ga0070673_100515752 3300005364 Bacteria 1083
7 Ga0070709_10000214 3300005434 Bacteria 37458
8 Ga0070714_100013977 3300005435 Bacteria 6440
9 Ga0070714_100069853 3300005435 Bacteria 3034
10 Ga0070714_100145696 3300005435 Bacteria 2130
11 Ga0070713_100008107 3300005436 Bacteria 7430
12 Ga0070662_100000006 3300005457 Bacteria 169366
13 Ga0070707_100049827 3300005468 Bacteria 4015
14 Ga0070707_100062940 3300005468 Bacteria 3560
15 Ga0070707_100129742 3300005468 Bacteria 2451
16 Ga0070698_100640335 3300005471 Bacteria 1004
17 Ga0070679_100661724 3300005530 Bacteria 987
18 Ga0070697_100400394 3300005536 Bacteria 1191
19 Ga0070665_100092802 3300005548 Bacteria 3024
20 Ga0070664_100018163 3300005564 Bacteria 5773
21 Ga0068857_100683896 3300005577 Bacteria 974
22 Ga0068856_100007140 3300005614 Bacteria 10894
23 Ga0068864_100033414 3300005618 Bacteria 4373
24 Ga0068870_10105904 3300005840 Bacteria 1598
25 Ga0068863_100151819 3300005841 Bacteria 2217
26 Ga0070717_10195520 3300006028 Bacteria 1769
27 Ga0070715_10000014 3300006163 Bacteria 154272
28 Ga0070716_100021658 3300006173 Bacteria 3390
29 Ga0068871_100268810 3300006358 Bacteria 1489
30 Ga0075429_100784045 3300006880 Bacteria 835
31 Ga0111539_10382284 3300009094 Bacteria 1639
32 Ga0105247_10000322 3300009101 Bacteria 42918
33 Ga0105248_10393299 3300009177 Bacteria 1561
34 Ga0105238_10000033 3300009551 Bacteria 172981
35 Ga0157371_10024017 3300013102 Bacteria 4454
36 Ga0157378_10027618 3300013297 Bacteria 5006
37 Ga0157375_10000112 3300013308 Bacteria 79146
38 Ga0163163_10261400 3300014325 Bacteria 1782
39 Ga0213873_10067235 3300021358 Bacteria 981
40 Ga0213871_10029875 3300021441 Bacteria 1416
41 Ga0224712_10093967 3300022467 Bacteria 1261
42 Ga0207710_10000158 3300025900 Bacteria 72527
43 Ga0207685_10000046 3300025905 Bacteria 46018
44 Ga0207699_10000045 3300025906 Bacteria 112158
45 Ga0207646_10042794 3300025922 Bacteria 4069
46 Ga0207646_10125971 3300025922 Bacteria 2303
47 Ga0207646_10141641 3300025922 Bacteria 2166
48 Ga0207694_10000012 3300025924 Bacteria 411218
49 Ga0207650_10004540 3300025925 Bacteria 9492
50 Ga0207687_10000691 3300025927 Bacteria 22768
51 Ga0207700_10001094 3300025928 Bacteria 15621
52 Ga0207664_10010543 3300025929 Bacteria 6528
53 Ga0207664_10022873 3300025929 Bacteria 4675
54 Ga0207664_10063748 3300025929 Bacteria 2946
55 Ga0207706_10000017 3300025933 Bacteria 169589
56 Ga0207665_10029250 3300025939 Bacteria 3643
57 Ga0207651_10140235 3300025960 Bacteria 1866
58 Ga0207658_10553498 3300025986 Bacteria 1030
59 Ga0207677_10000279 3300026023 Bacteria 38227
60 Ga0207702_10003776 3300026078 Bacteria 13676
61 Ga0207641_10466575 3300026088 Bacteria 1222
62 Ga0207676_10014386 3300026095 Bacteria 5691
63 Ga0268266_10040440 3300028379 Bacteria 3974
64 Ga0265337_1000069 3300028556 Bacteria 47825
65 Ga0265326_10000012 3300028558 Bacteria 175352
66 Ga0265322_10000003 3300028654 Bacteria 468671
67 Ga0265336_10007226 3300028666 Bacteria 3962
68 Ga0307515_10000067 3300028794 Bacteria 242978
69 Ga0265338_10212509 3300028800 Bacteria 1451
70 Ga0265324_10000398 3300029957 Bacteria 31535
71 Ga0265332_10054033 3300031238 Bacteria 1724
72 Ga0265328_10000555 3300031239 Bacteria 17361
73 Ga0265320_10000001 3300031240 Bacteria 847191
74 Ga0265329_10001477 3300031242 Bacteria 11279
75 Ga0265339_10011065 3300031249 Bacteria 5573
76 Ga0265331_10001290 3300031250 Bacteria 18656
77 Ga0265327_10000003 3300031251 Bacteria 852750
78 Ga0265327_10129874 3300031251 Bacteria 1186
79 Ga0265314_10000044 3300031711 Bacteria 207337
80 Ga0373934_0191836 3300035086 Bacteria 841
81 Ga0373953_0164195 3300035117 Bacteria 955
82 Ga0373957_0164904 3300035120 Bacteria 914
83 Ga0373955_0076926 3300035172 Bacteria 1878
84 Ga0436364_0500954 3300037853 Bacteria 1135
85 Ga0436360_0135407 3300039438 Bacteria 2330
86 Ga0436360_0414981 3300039438 Bacteria 2280
87 Ga0436361_0915459 3300039447 Bacteria 1629
88 Ga0436361_0953124 3300039447 Bacteria 1164
89 Ga0436363_0464180 3300039450 Bacteria 4498
90 Ga0436362_0614151 3300039453 Bacteria 1611
91 Ga0436362_0662304 3300039453 Bacteria 1071
92 Ga0436362_0858055 3300039453 Bacteria 1352
93 Ga0466969_0084227 3300044656 Bacteria 1513
94 Ga0453684_0148969 3300044712 Bacteria 2783
95 Ga0466959_0011916 3300045049 Bacteria 6267
96 Ga0466967_0313800 3300045976 Bacteria 1511
97 Ga0495592_0005904 3300046454 Bacteria 9090
98 Ga0495592_0036477 3300046454 Bacteria 3703
99 Ga0495592_0285926 3300046454 Bacteria 1077
100 Ga0495653_0029609 3300046463 Bacteria 4369
101 Ga0495653_0041262 3300046463 Bacteria 3603
102 Ga0495653_0292950 3300046463 Bacteria 1064
103 Ga0495582_0000003 3300046473 Bacteria 168880
104 Ga0495662_0000167 3300046476 Bacteria 25884
105 Ga0495608_0021021 3300046511 Bacteria 4483
106 Ga0495618_0000026 3300046514 Bacteria 113266
107 Ga0495618_0440997 3300046514 Bacteria 791
108 Ga0495628_0005318 3300046516 Bacteria 11293
109 Ga0495628_0057553 3300046516 Bacteria 3058
110 Ga0495628_0346750 3300046516 Bacteria 1092
111 Ga0495628_0366848 3300046516 Bacteria 1056
112 Ga0495630_0000862 3300046517 Bacteria 21408
113 Ga0495644_0000635 3300046523 Bacteria 14657
114 Ga0495652_0000019 3300046529 Bacteria 190248
115 Ga0495586_0071158 3300046535 Bacteria 1900
116 Ga0495587_0004675 3300046536 Bacteria 8993
117 Ga0495587_0139702 3300046536 Bacteria 1383
118 Ga0495635_0000005 3300046663 Bacteria 302178
119 Ga0495657_0003952 3300046675 Bacteria 11902
120 Ga0495599_0006830 3300046678 Bacteria 6899
121 Ga0495646_0213639 3300046680 Bacteria 1046
122 Ga0495647_0000004 3300046681 Bacteria 140700
123 Ga0495647_0011820 3300046681 Bacteria 2995
124 Ga0495658_0000001 3300046683 Bacteria 385362
125 Ga0495658_0115507 3300046683 Bacteria 1618
126 Ga0495613_0000021 3300046689 Bacteria 159188
127 Ga0495613_0103749 3300046689 Bacteria 2053
128 Ga0495624_0041427 3300046690 Bacteria 2946
129 Ga0495600_0000988 3300046809 Bacteria 15329
130 Ga0495604_0000089 3300047317 Bacteria 77741
131 Ga0495672_0089235 3300047320 Bacteria 1697
132 Ga0495680_0000007 3300047322 Bacteria 152053
133 Ga0495680_0068244 3300047322 Bacteria 2717
134 Ga0495684_0451643 3300047471 Bacteria 893
135 Ga0495593_0019489 3300047673 Bacteria 3803
136 Ga0495602_0038003 3300048088 Bacteria 4458
137 Ga0496100_0559720 3300048903 Bacteria 885
138 Ga0496102_0054708 3300048905 Bacteria 3640
139 Ga0496103_0007545 3300048906 Bacteria 6483
140 Ga0496103_0025244 3300048906 Bacteria 3590
141 Ga0496104_0005385 3300048907 Bacteria 11204
142 Ga0496105_0002429 3300048908 Bacteria 13502
143 Ga0496108_0000630 3300048911 Bacteria 27529
144 Ga0496109_0000168 3300048912 Bacteria 64462
145 Ga0496110_0424783 3300048913 Bacteria 1212
146 Ga0496111_0034298 3300048914 Bacteria 3623
147 Ga0496112_0211220 3300048915 Bacteria 1898
148 Ga0496112_0487592 3300048915 Bacteria 1169
149 Ga0496113_0096585 3300048916 Bacteria 2285
150 Ga0496117_0018730 3300048920 Bacteria 5718
151 Ga0496118_0000174 3300048921 Bacteria 115950
152 Ga0496119_0016117 3300048922 Bacteria 5707
153 Ga0496120_0011239 3300048923 Bacteria 6172
154 Ga0496121_0010179 3300048924 Bacteria 10648
155 Ga0496121_0031861 3300048924 Bacteria 4808
156 Ga0496125_0045810 3300048928 Bacteria 3676
157 Ga0496126_0056263 3300048929 Bacteria 3556
158 Ga0501032_0013447 3300049569 Bacteria 5820
159 Ga0501033_0002457 3300049570 Bacteria 15746
160 Ga0501034_0003033 3300049571 Bacteria 19416
161 Ga0501036_0002236 3300049572 Bacteria 15134
162 Ga0501038_0022719 3300049574 Bacteria 5615
163 Ga0501039_0007766 3300049575 Bacteria 8182
164 Ga0501043_0134691 3300049579 Bacteria 1935
165 Ga0501046_0001131 3300049580 Bacteria 26046
166 Ga0501047_0020420 3300049581 Bacteria 6361
167 Ga0501047_0022571 3300049581 Bacteria 6042
168 Ga0501048_0004999 3300049582 Bacteria 10110
169 Ga0501067_0035154 3300049583 Bacteria 2782
170 Ga0501068_0043490 3300049584 Bacteria 2703
171 Ga0501069_0076438 3300049585 Bacteria 1882
172 Ga0501070_0031956 3300049586 Bacteria 4408
173 Ga0501070_0256407 3300049586 Bacteria 1430
174 Ga0501071_0005360 3300049587 Bacteria 8239
175 Ga0501072_0060905 3300049588 Bacteria 2976
176 Ga0501073_0008645 3300049589 Bacteria 7544
177 Ga0501074_0038205 3300049590 Bacteria 3479
178 Ga0501074_0047491 3300049590 Bacteria 3103
179 Ga0501079_0132423 3300049741 Bacteria 1940
180 Ga0501080_0013685 3300049742 Bacteria 7470
181 Ga0501080_0084824 3300049742 Bacteria 2943
182 Ga0501081_0058105 3300049743 Bacteria 2676
183 Ga0501083_0063275 3300049744 Bacteria 2467
184 Ga0501035_0018958 3300049822 Bacteria 6336
185 Ga0501044_0003292 3300049823 Bacteria 18191
186 Ga0501044_0012665 3300049823 Bacteria 9134
187 Ga0495601_0000035 3300053077 Bacteria 92903
188 Ga0495601_0002976 3300053077 Bacteria 9645
189 Ga0495601_0021417 3300053077 Bacteria 3959
190 Ga0495601_0065482 3300053077 Bacteria 2313
191 Ga0495601_0166413 3300053077 Bacteria 1441
192 Ga0495601_0248640 3300053077 Bacteria 1161
193 Ga0495612_0000073 3300053078 Bacteria 45639
194 Ga0495612_0003456 3300053078 Bacteria 6548
195 Ga0495595_0000072 3300053084 Bacteria 49973
196 Ga0495619_0021940 3300053085 Bacteria 4082
197 Ga0495619_0141879 3300053085 Bacteria 1655
198 Ga0495619_0178259 3300053085 Bacteria 1470
199 Ga0495619_0214396 3300053085 Bacteria 1333
200 Ga0500595_025870 3300053119 Bacteria 2028
201 Ga0501082_0031692 3300060353 Bacteria 4559

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046454 Ga0495592_0036477 Ga0495592_0036477_1504_2229 216
2 3300048088 Ga0495602_0038003 Ga0495602_0038003_2976_3701 216
3 3300031251 Ga0265327_10129874 Ga0265327_101298741 220
4 3300005355 Ga0070671_100503894 Ga0070671_1005038942 224
5 3300005364 Ga0070673_100515752 Ga0070673_1005157521 224
6 3300005536 Ga0070697_100400394 Ga0070697_1004003941 224
7 3300005564 Ga0070664_100018163 Ga0070664_1000181632 224
8 3300005577 Ga0068857_100683896 Ga0068857_1006838962 224
9 3300005840 Ga0068870_10105904 Ga0068870_101059042 224
10 3300005841 Ga0068863_100151819 Ga0068863_1001518192 224
11 3300006358 Ga0068871_100268810 Ga0068871_1002688101 224
12 3300006880 Ga0075429_100784045 Ga0075429_1007840451 224
13 3300009094 Ga0111539_10382284 Ga0111539_103822842 224
14 3300009177 Ga0105248_10393299 Ga0105248_103932992 224
15 3300025925 Ga0207650_10004540 Ga0207650_100045403 224
16 3300025986 Ga0207658_10553498 Ga0207658_105534981 224
17 3300026088 Ga0207641_10466575 Ga0207641_104665751 224
18 3300005471 Ga0070698_100640335 Ga0070698_1006403351 226
19 3300044712 Ga0453684_0148969 Ga0453684_0148969_1855_2562 227
20 3300046681 Ga0495647_0000004 Ga0495647_0000004_50252_50977 227
21 3300005329 Ga0070683_100399461 Ga0070683_1003994611 228
22 3300022467 Ga0224712_10093967 Ga0224712_100939672 228
23 3300045049 Ga0466959_0011916 Ga0466959_0011916_4633_5328 228
24 3300005435 Ga0070714_100013977 Ga0070714_1000139771 229
25 3300025929 Ga0207664_10022873 Ga0207664_100228736 229
26 3300005364 Ga0070673_100204421 Ga0070673_1002044212 230
27 3300005435 Ga0070714_100069853 Ga0070714_1000698533 230
28 3300005618 Ga0068864_100033414 Ga0068864_1000334143 230
29 3300006028 Ga0070717_10195520 Ga0070717_101955202 230
30 3300025929 Ga0207664_10063748 Ga0207664_100637482 230
31 3300025960 Ga0207651_10140235 Ga0207651_101402352 230
32 3300026095 Ga0207676_10014386 Ga0207676_100143864 230
33 3300039447 Ga0436361_0915459 Ga0436361_0915459_26_739 230
34 3300049569 Ga0501032_0013447 Ga0501032_0013447_1215_1910 230
35 3300049570 Ga0501033_0002457 Ga0501033_0002457_3616_4311 230
36 3300049571 Ga0501034_0003033 Ga0501034_0003033_168_863 230
37 3300049572 Ga0501036_0002236 Ga0501036_0002236_4189_4884 230
38 3300049574 Ga0501038_0022719 Ga0501038_0022719_3705_4400 230
39 3300049575 Ga0501039_0007766 Ga0501039_0007766_1084_1779 230
40 3300049579 Ga0501043_0134691 Ga0501043_0134691_830_1525 230
41 3300049580 Ga0501046_0001131 Ga0501046_0001131_6237_6932 230
42 3300049582 Ga0501048_0004999 Ga0501048_0004999_1510_2205 230
43 3300049583 Ga0501067_0035154 Ga0501067_0035154_1193_1888 230
44 3300049585 Ga0501069_0076438 Ga0501069_0076438_302_997 230
45 3300049586 Ga0501070_0031956 Ga0501070_0031956_355_1050 230
46 3300049588 Ga0501072_0060905 Ga0501072_0060905_778_1473 230
47 3300049589 Ga0501073_0008645 Ga0501073_0008645_801_1496 230
48 3300049590 Ga0501074_0038205 Ga0501074_0038205_1501_2196 230
49 3300049741 Ga0501079_0132423 Ga0501079_0132423_733_1428 230
50 3300049742 Ga0501080_0013685 Ga0501080_0013685_1415_2110 230
51 3300049744 Ga0501083_0063275 Ga0501083_0063275_815_1510 230
52 3300049822 Ga0501035_0018958 Ga0501035_0018958_4995_5690 230
53 3300049823 Ga0501044_0003292 Ga0501044_0003292_7032_7727 230
54 3300060353 Ga0501082_0031692 Ga0501082_0031692_2461_3156 230
55 3300028794 Ga0307515_10000067 Ga0307515_10000067163 231
56 3300046516 Ga0495628_0005318 Ga0495628_0005318_9047_9775 231
57 3300046681 Ga0495647_0011820 Ga0495647_0011820_770_1498 231
58 3300005468 Ga0070707_100049827 Ga0070707_1000498273 232
59 3300025922 Ga0207646_10042794 Ga0207646_100427943 232
60 3300025929 Ga0207664_10010543 Ga0207664_100105434 232
61 3300048903 Ga0496100_0559720 Ga0496100_0559720_138_866 232
62 3300005434 Ga0070709_10000214 Ga0070709_100002144 233
63 3300005436 Ga0070713_100008107 Ga0070713_1000081074 233
64 3300006173 Ga0070716_100021658 Ga0070716_1000216584 233
65 3300025906 Ga0207699_10000045 Ga0207699_10000045116 233
66 3300025928 Ga0207700_10001094 Ga0207700_100010944 233
67 3300025939 Ga0207665_10029250 Ga0207665_100292502 233
68 3300047320 Ga0495672_0089235 Ga0495672_0089235_656_1357 233
69 3300005435 Ga0070714_100145696 Ga0070714_1001456962 234
70 3300045976 Ga0466967_0313800 Ga0466967_0313800_50_757 234
71 3300053085 Ga0495619_0021940 Ga0495619_0021940_2258_2968 234
72 3300005468 Ga0070707_100129742 Ga0070707_1001297422 235
73 3300021358 Ga0213873_10067235 Ga0213873_100672351 235
74 3300025922 Ga0207646_10141641 Ga0207646_101416412 235
75 3300039447 Ga0436361_0953124 Ga0436361_0953124_309_1040 235
76 3300039453 Ga0436362_0614151 Ga0436362_0614151_55_786 235
77 3300039453 Ga0436362_0858055 Ga0436362_0858055_332_1063 235
78 3300047322 Ga0495680_0000007 Ga0495680_0000007_6547_7275 235
79 3300013308 Ga0157375_10000112 Ga0157375_1000011267 236
80 3300025900 Ga0207710_10000158 Ga0207710_1000015827 236
81 3300046511 Ga0495608_0021021 Ga0495608_0021021_259_969 236
82 3300046689 Ga0495613_0103749 Ga0495613_0103749_1067_1777 236
83 3300047471 Ga0495684_0451643 Ga0495684_0451643_85_816 236
84 3300048911 Ga0496108_0000630 Ga0496108_0000630_14225_14935 236
85 3300048912 Ga0496109_0000168 Ga0496109_0000168_51166_51876 236
86 3300005548 Ga0070665_100092802 Ga0070665_1000928024 237
87 3300006163 Ga0070715_10000014 Ga0070715_1000001438 237
88 3300025905 Ga0207685_10000046 Ga0207685_1000004637 237
89 3300028379 Ga0268266_10040440 Ga0268266_100404404 237
90 3300046454 Ga0495592_0285926 Ga0495592_0285926_100_816 237
91 3300048905 Ga0496102_0054708 Ga0496102_0054708_1753_2466 237
92 3300048906 Ga0496103_0007545 Ga0496103_0007545_3222_3935 237
93 3300048906 Ga0496103_0025244 Ga0496103_0025244_2061_2774 237
94 3300048920 Ga0496117_0018730 Ga0496117_0018730_4149_4862 237
95 3300048921 Ga0496118_0000174 Ga0496118_0000174_6696_7409 237
96 3300048923 Ga0496120_0011239 Ga0496120_0011239_1878_2591 237
97 3300048924 Ga0496121_0010179 Ga0496121_0010179_8038_8751 237
98 3300049581 Ga0501047_0020420 Ga0501047_0020420_1775_2488 237
99 3300005530 Ga0070679_100661724 Ga0070679_1006617241 238
100 3300046463 Ga0495653_0029609 Ga0495653_0029609_1288_2016 238
101 3300046473 Ga0495582_0000003 Ga0495582_0000003_99159_99881 238
102 3300046514 Ga0495618_0000026 Ga0495618_0000026_22901_23629 238
103 3300046516 Ga0495628_0346750 Ga0495628_0346750_104_922 238
104 3300046523 Ga0495644_0000635 Ga0495644_0000635_13118_13834 238
105 3300046529 Ga0495652_0000019 Ga0495652_0000019_99665_100381 238
106 3300046535 Ga0495586_0071158 Ga0495586_0071158_334_1050 238
107 3300046536 Ga0495587_0139702 Ga0495587_0139702_452_1180 238
108 3300046663 Ga0495635_0000005 Ga0495635_0000005_162746_163474 238
109 3300046675 Ga0495657_0003952 Ga0495657_0003952_1660_2388 238
110 3300046683 Ga0495658_0000001 Ga0495658_0000001_72530_73252 238
111 3300046689 Ga0495613_0000021 Ga0495613_0000021_47922_48653 238
112 3300046690 Ga0495624_0041427 Ga0495624_0041427_1358_2086 238
113 3300046809 Ga0495600_0000988 Ga0495600_0000988_11830_12558 238
114 3300048907 Ga0496104_0005385 Ga0496104_0005385_1797_2513 238
115 3300048908 Ga0496105_0002429 Ga0496105_0002429_12519_13235 238
116 3300048913 Ga0496110_0424783 Ga0496110_0424783_128_844 238
117 3300048915 Ga0496112_0211220 Ga0496112_0211220_65_781 238
118 3300048922 Ga0496119_0016117 Ga0496119_0016117_3160_3876 238
119 3300048924 Ga0496121_0031861 Ga0496121_0031861_2103_2819 238
120 3300048928 Ga0496125_0045810 Ga0496125_0045810_1995_2711 238
121 3300048929 Ga0496126_0056263 Ga0496126_0056263_778_1494 238
122 3300049586 Ga0501070_0256407 Ga0501070_0256407_150_866 238
123 3300049590 Ga0501074_0047491 Ga0501074_0047491_658_1374 238
124 3300053077 Ga0495601_0248640 Ga0495601_0248640_188_904 238
125 3300053078 Ga0495612_0003456 Ga0495612_0003456_2053_2781 238
126 3300053119 Ga0500595_025870 Ga0500595_025870_312_1028 238
127 3300005468 Ga0070707_100062940 Ga0070707_1000629402 239
128 3300005614 Ga0068856_100007140 Ga0068856_1000071402 239
129 3300009101 Ga0105247_10000322 Ga0105247_100003227 239
130 3300009551 Ga0105238_10000033 Ga0105238_1000003316 239
131 3300013102 Ga0157371_10024017 Ga0157371_100240178 239
132 3300013297 Ga0157378_10027618 Ga0157378_100276182 239
133 3300025924 Ga0207694_10000012 Ga0207694_1000001216 239
134 3300025927 Ga0207687_10000691 Ga0207687_1000069117 239
135 3300026078 Ga0207702_10003776 Ga0207702_1000377611 239
136 3300028556 Ga0265337_1000069 Ga0265337_10000694 239
137 3300028558 Ga0265326_10000012 Ga0265326_1000001278 239
138 3300028654 Ga0265322_10000003 Ga0265322_10000003365 239
139 3300028666 Ga0265336_10007226 Ga0265336_100072262 239
140 3300028800 Ga0265338_10212509 Ga0265338_102125091 239
141 3300029957 Ga0265324_10000398 Ga0265324_1000039826 239
142 3300031238 Ga0265332_10054033 Ga0265332_100540332 239
143 3300031239 Ga0265328_10000555 Ga0265328_100005559 239
144 3300031240 Ga0265320_10000001 Ga0265320_10000001365 239
145 3300031242 Ga0265329_10001477 Ga0265329_100014776 239
146 3300031249 Ga0265339_10011065 Ga0265339_100110654 239
147 3300031250 Ga0265331_10001290 Ga0265331_1000129010 239
148 3300031251 Ga0265327_10000003 Ga0265327_10000003365 239
149 3300031711 Ga0265314_10000044 Ga0265314_10000044102 239
150 3300035086 Ga0373934_0191836 Ga0373934_0191836_53_778 239
151 3300035117 Ga0373953_0164195 Ga0373953_0164195_211_936 239
152 3300035120 Ga0373957_0164904 Ga0373957_0164904_103_828 239
153 3300035172 Ga0373955_0076926 Ga0373955_0076926_530_1255 239
154 3300046454 Ga0495592_0005904 Ga0495592_0005904_2523_3248 239
155 3300046463 Ga0495653_0041262 Ga0495653_0041262_1920_2648 239
156 3300046463 Ga0495653_0292950 Ga0495653_0292950_63_788 239
157 3300046476 Ga0495662_0000167 Ga0495662_0000167_11394_12119 239
158 3300046514 Ga0495618_0440997 Ga0495618_0440997_24_752 239
159 3300046516 Ga0495628_0057553 Ga0495628_0057553_2114_2839 239
160 3300046516 Ga0495628_0366848 Ga0495628_0366848_276_1004 239
161 3300046517 Ga0495630_0000862 Ga0495630_0000862_15407_16132 239
162 3300046536 Ga0495587_0004675 Ga0495587_0004675_7833_8558 239
163 3300046678 Ga0495599_0006830 Ga0495599_0006830_4802_5527 239
164 3300046680 Ga0495646_0213639 Ga0495646_0213639_222_950 239
165 3300046683 Ga0495658_0115507 Ga0495658_0115507_206_952 239
166 3300047317 Ga0495604_0000089 Ga0495604_0000089_36700_37425 239
167 3300047322 Ga0495680_0068244 Ga0495680_0068244_1121_1846 239
168 3300047673 Ga0495593_0019489 Ga0495593_0019489_600_1325 239
169 3300048914 Ga0496111_0034298 Ga0496111_0034298_2409_3134 239
170 3300048915 Ga0496112_0487592 Ga0496112_0487592_108_833 239
171 3300048916 Ga0496113_0096585 Ga0496113_0096585_176_901 239
172 3300049581 Ga0501047_0022571 Ga0501047_0022571_2405_3130 239
173 3300049584 Ga0501068_0043490 Ga0501068_0043490_294_1019 239
174 3300049587 Ga0501071_0005360 Ga0501071_0005360_6618_7343 239
175 3300049742 Ga0501080_0084824 Ga0501080_0084824_1873_2598 239
176 3300049743 Ga0501081_0058105 Ga0501081_0058105_944_1663 239
177 3300049823 Ga0501044_0012665 Ga0501044_0012665_753_1478 239
178 3300053077 Ga0495601_0000035 Ga0495601_0000035_49573_50298 239
179 3300053077 Ga0495601_0002976 Ga0495601_0002976_910_1635 239
180 3300053077 Ga0495601_0021417 Ga0495601_0021417_767_1492 239
181 3300053077 Ga0495601_0065482 Ga0495601_0065482_947_1675 239
182 3300053077 Ga0495601_0166413 Ga0495601_0166413_631_1356 239
183 3300053078 Ga0495612_0000073 Ga0495612_0000073_39291_40019 239
184 3300053084 Ga0495595_0000072 Ga0495595_0000072_48821_49549 239
185 3300053085 Ga0495619_0141879 Ga0495619_0141879_793_1518 239
186 3300053085 Ga0495619_0178259 Ga0495619_0178259_501_1226 239
187 3300053085 Ga0495619_0214396 Ga0495619_0214396_205_924 239
188 3300002459 JGI24751J29686_10021528 JGI24751J29686_100215282 240
189 3300005338 Ga0068868_100000229 Ga0068868_10000022914 240
190 3300005457 Ga0070662_100000006 Ga0070662_10000000650 240
191 3300014325 Ga0163163_10261400 Ga0163163_102614002 240
192 3300021441 Ga0213871_10029875 Ga0213871_100298752 240
193 3300025922 Ga0207646_10125971 Ga0207646_101259713 240
194 3300025933 Ga0207706_10000017 Ga0207706_1000001750 240
195 3300026023 Ga0207677_10000279 Ga0207677_1000027914 240
196 3300037853 Ga0436364_0500954 Ga0436364_0500954_333_1079 240
197 3300039438 Ga0436360_0135407 Ga0436360_0135407_1188_1934 240
198 3300039438 Ga0436360_0414981 Ga0436360_0414981_63_800 240
199 3300039450 Ga0436363_0464180 Ga0436363_0464180_3646_4386 240
200 3300039453 Ga0436362_0662304 Ga0436362_0662304_228_965 240
201 3300044656 Ga0466969_0084227 Ga0466969_0084227_282_1019 240

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

40

149

0.98

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

187

263

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zxj-assembly2.cif.gz_B crystal structure of yycf dna-binding domain from staphylococcus aureus 0.9495 135 233
5za3-assembly1.cif.gz_B structure of a c-terminal s. mutans response regulator vicr domain 0.9474 136 232
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9436 9 126
2d1v-assembly1.cif.gz_A crystal structure of dna-binding domain of bacillus subtilis yycf 0.9434 133 235
2zwm-assembly1.cif.gz_B crystal structure of yycf receiver domain from bacillus subtilis 0.9429 10 124
ID Description Score Start End Superfamily
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9925 10 84 3.40.50.2300
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9855 10 86 3.40.50.2300
af_Q2G2U6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9793 10 91 3.40.50.2300
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9793 10 89 3.40.50.2300
af_P76340_1_79_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9734 10 86 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A209DBN3-F1-model_v4 DNA-binding response regulator 0.8265 1 240 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A209DBN3-F1-model_v4 DNA-binding response regulator 0.8234 1 240 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7C3JYD1-F1-model_v4 Response regulator transcription factor 0.8131 10 240 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A3N1NRR2-F1-model_v4 Two-component system response regulator PfeR 0.8082 1 239 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A3N1NRR2-F1-model_v4 Two-component system response regulator PfeR 0.8022 1 239 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
81.61 0.55 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map