F308688

General Info

Members Datasets Scaffolds Average Seq Length
201 142 402 410

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10089045|Ga0316576_100890452
Length 423
Sequence MPAFDVAYVRSQFPALRRTVDGRPAAYLDGPGGTQTPQRVIDAVADYLANHNCNIHGAFATSEETDAVVQAAHEAGADLLGCDWSEVSYGANMTTLAFLLSDALARGVRPGDEVLVTQLDHEANRGPWLRLAERGAVIREVPVDLATCTLDWDAFERLVEPGKTRLVAVGYASNAVGTVNDVARAAALAREAGAISVIDAVHYALHGPIDVSAIGCDFLLCSAYKFFGPHVGLMYARRATTELLQPVRLSTQEPDPPFVWETGTLNHEGMAGTTAAIDFIADIGERHVGSVADRLPGGLQGRRRAVVAGMLAGDAYEQPLAARLRERLSAIAGVALYGPPEGSPRTSTVSFTLEGFQAGEVCRALGARGLFTWDGDFYAHRLVELLGLLPRGGLVRAGLAPYTTEAEIERLVTAVGELSRSVR

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
97 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
102 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
103 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
104 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
105 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
107 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
115 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
116 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
139 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
140 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.51
Metatranscriptomes 1
Isolates 0.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.47
Nodule 0
Rhizoplane 1.49
Rhizosphere 82.09
Stem 0
Stem Tuber 0
Unclassified 14.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10089045 3300031727 Bacteria 2298
2 rootH1_10079489 3300003316 Unclassified 4401
3 rootH1_10190865 3300003323 Bacteria 1580
4 Ga0055531_10000232 3300003794 Bacteria 61570
5 Ga0070676_10023364 3300005328 Bacteria 3475
6 Ga0070690_100006785 3300005330 Bacteria 6510
7 Ga0070690_100086198 3300005330 Unclassified 2061
8 Ga0070666_10011480 3300005335 Bacteria 5561
9 Ga0070669_100000006 3300005353 Bacteria 268982
10 Ga0070675_100027400 3300005354 Bacteria 4577
11 Ga0070688_100118533 3300005365 Bacteria 1769
12 Ga0070659_100092960 3300005366 Bacteria 2420
13 Ga0070667_100008257 3300005367 Bacteria 8629
14 Ga0070667_100057299 3300005367 Bacteria 3293
15 Ga0070667_100085877 3300005367 Bacteria 2699
16 Ga0070667_100100471 3300005367 Bacteria 2498
17 Ga0070663_100109275 3300005455 Bacteria 2076
18 Ga0070678_100007509 3300005456 Bacteria 6474
19 Ga0070662_100079511 3300005457 Bacteria 2438
20 Ga0068867_100015552 3300005459 Bacteria 5398
21 Ga0070685_10056729 3300005466 Bacteria 2278
22 Ga0070685_10175164 3300005466 Bacteria 1377
23 Ga0070698_100032857 3300005471 Bacteria 5374
24 Ga0070698_100229116 3300005471 Unclassified 1791
25 Ga0068853_100234530 3300005539 Bacteria 1680
26 Ga0070672_100018404 3300005543 Bacteria 5051
27 Ga0070686_100029655 3300005544 Bacteria 3331
28 Ga0070686_100029760 3300005544 Unclassified 3326
29 Ga0070686_100085419 3300005544 Bacteria 2099
30 Ga0070665_100000855 3300005548 Bacteria 39623
31 Ga0070665_100126197 3300005548 Unclassified 2561
32 Ga0068859_100000591 3300005617 Bacteria 36173
33 Ga0068859_100036634 3300005617 Bacteria 4925
34 Ga0068859_100048077 3300005617 Bacteria 4285
35 Ga0068859_100116911 3300005617 Bacteria 2731
36 Ga0068866_10023164 3300005718 Bacteria 2885
37 Ga0068866_10137084 3300005718 Bacteria 1400
38 Ga0068861_100018294 3300005719 Bacteria 4991
39 Ga0068861_100102174 3300005719 Unclassified 2282
40 Ga0068851_10000117 3300005834 Bacteria 42529
41 Ga0068863_100007797 3300005841 Bacteria 10469
42 Ga0068863_100053488 3300005841 Bacteria 3827
43 Ga0068858_100001627 3300005842 Bacteria 22901
44 Ga0068858_100013318 3300005842 Bacteria 7756
45 Ga0068860_100000969 3300005843 Bacteria 31793
46 Ga0068860_100006476 3300005843 Bacteria 11761
47 Ga0068862_100003752 3300005844 Bacteria 12954
48 Ga0075365_10038156 3300006038 Unclassified 3121
49 Ga0075368_10034773 3300006042 Bacteria 1965
50 Ga0075363_100007058 3300006048 Bacteria 5137
51 Ga0075364_10046720 3300006051 Unclassified 2819
52 Ga0070716_100034565 3300006173 Bacteria 2773
53 Ga0075362_10040741 3300006177 Bacteria 2046
54 Ga0075367_10002316 3300006178 Bacteria 8654
55 Ga0075366_10001701 3300006195 Bacteria 11054
56 Ga0075434_100089964 3300006871 Bacteria 3071
57 Ga0068865_100014623 3300006881 Bacteria 4991
58 Ga0097620_100000591 3300006931 Bacteria 36173
59 Ga0097620_100036634 3300006931 Bacteria 4925
60 Ga0097620_100048070 3300006931 Bacteria 4285
61 Ga0097620_100116905 3300006931 Bacteria 2731
62 Ga0075435_100051373 3300007076 Bacteria 3320
63 Ga0099795_10000116 3300007788 Bacteria 13292
64 Ga0105240_10076649 3300009093 Unclassified 4122
65 Ga0111539_10000953 3300009094 Bacteria 37959
66 Ga0105247_10004683 3300009101 Bacteria 8715
67 Ga0105247_10051036 3300009101 Bacteria 2546
68 Ga0114129_10227114 3300009147 Bacteria 2515
69 Ga0105248_10011856 3300009177 Bacteria 9617
70 Ga0105238_10036608 3300009551 Unclassified 4990
71 Ga0105249_10036617 3300009553 Bacteria 4452
72 Ga0105249_10131813 3300009553 Unclassified 2387
73 Ga0105249_10136282 3300009553 Bacteria 2349
74 Ga0099796_10001092 3300010159 Bacteria 5195
75 Ga0157374_10215866 3300013296 Bacteria 1882
76 Ga0163162_10021516 3300013306 Bacteria 6352
77 Ga0163162_10117324 3300013306 Unclassified 2763
78 Ga0163162_10162674 3300013306 Unclassified 2354
79 Ga0157375_10234514 3300013308 Bacteria 1994
80 Ga0163163_10089274 3300014325 Unclassified 3094
81 Ga0163163_10328977 3300014325 Unclassified 1582
82 Ga0157380_10054062 3300014326 Unclassified 3185
83 Ga0157377_10084636 3300014745 Bacteria 1860
84 Ga0157379_10005772 3300014968 Bacteria 10655
85 Ga0157379_10288771 3300014968 Unclassified 1493
86 Ga0163161_10114119 3300017792 Bacteria 2023
87 Ga0209257_1000006 3300025304 Bacteria 1570111
88 Ga0207656_10000718 3300025321 Bacteria 10838
89 Ga0207710_10000196 3300025900 Bacteria 57024
90 Ga0207710_10026603 3300025900 Bacteria 2501
91 Ga0207680_10012812 3300025903 Bacteria 4284
92 Ga0207680_10076948 3300025903 Unclassified 2085
93 Ga0207645_10023462 3300025907 Bacteria 4010
94 Ga0207684_10022723 3300025910 Bacteria 5354
95 Ga0207654_10089812 3300025911 Bacteria 1870
96 Ga0207695_10076456 3300025913 Unclassified 3403
97 Ga0207695_10105905 3300025913 Bacteria 2799
98 Ga0207671_10102096 3300025914 Unclassified 2174
99 Ga0207662_10016042 3300025918 Bacteria 4222
100 Ga0207646_10005213 3300025922 Bacteria 13736
101 Ga0207681_10000006 3300025923 Bacteria 496979
102 Ga0207650_10019004 3300025925 Unclassified 4830
103 Ga0207659_10041153 3300025926 Bacteria 3235
104 Ga0207644_10004075 3300025931 Bacteria 9476
105 Ga0207706_10135837 3300025933 Bacteria 2163
106 Ga0207665_10020311 3300025939 Bacteria 4364
107 Ga0207665_10146595 3300025939 Bacteria 1687
108 Ga0207691_10009914 3300025940 Bacteria 9144
109 Ga0207711_10073497 3300025941 Bacteria 2971
110 Ga0207689_10063329 3300025942 Bacteria 3042
111 Ga0207712_10059788 3300025961 Unclassified 2699
112 Ga0207640_10072518 3300025981 Bacteria 2323
113 Ga0207658_10003903 3300025986 Bacteria 10483
114 Ga0207658_10027323 3300025986 Bacteria 4008
115 Ga0207658_10064935 3300025986 Unclassified 2739
116 Ga0207703_10001694 3300026035 Bacteria 19821
117 Ga0207703_10001976 3300026035 Bacteria 18107
118 Ga0207678_10014375 3300026067 Bacteria 6961
119 Ga0207678_10044164 3300026067 Bacteria 3855
120 Ga0207702_10069547 3300026078 Bacteria 3027
121 Ga0207641_10000247 3300026088 Bacteria 69132
122 Ga0207641_10044311 3300026088 Unclassified 3741
123 Ga0207641_10120054 3300026088 Bacteria 2344
124 Ga0207648_10001115 3300026089 Bacteria 30161
125 Ga0207648_10339689 3300026089 Bacteria 1352
126 Ga0207674_10208611 3300026116 Unclassified 1903
127 Ga0207675_100029477 3300026118 Bacteria 5113
128 Ga0209179_1000464 3300027512 Bacteria 4117
129 Ga0207428_10000410 3300027907 Bacteria 53259
130 Ga0207428_10000852 3300027907 Bacteria 34344
131 Ga0268266_10005870 3300028379 Bacteria 11364
132 Ga0268266_10022057 3300028379 Bacteria 5428
133 Ga0268266_10274856 3300028379 Bacteria 1565
134 Ga0268265_10025758 3300028380 Bacteria 4179
135 Ga0268265_10231347 3300028380 Bacteria 1625
136 Ga0268264_10000057 3300028381 Bacteria 309824
137 Ga0268264_10000165 3300028381 Bacteria 147648
138 Ga0268264_10001875 3300028381 Bacteria 19096
139 Ga0268264_10015515 3300028381 Bacteria 6246
140 Ga0307515_10000003 3300028794 Bacteria 891317
141 Ga0307515_10097939 3300028794 Bacteria 3577
142 Ga0307511_10021103 3300030521 Bacteria 6151
143 Ga0265765_1000897 3300030879 Bacteria 2600
144 Ga0265760_10005281 3300031090 Bacteria 3703
145 Ga0265316_10101873 3300031344 Bacteria 2181
146 Ga0307509_10000013 3300031507 Bacteria 283027
147 Ga0307508_10005475 3300031616 Bacteria 12072
148 Ga0316578_10058829 3300031728 Bacteria 2260
149 Ga0307510_10000014 3300033180 Bacteria 271607
150 Ga0373929_0000003 3300035085 Bacteria 575058
151 Ga0373936_0015974 3300035113 Bacteria 2881
152 Ga0373961_0001851 3300035241 Bacteria 5782
153 Ga0373935_0000876 3300035692 Bacteria 16270
154 Ga0373937_0136354 3300036401 Bacteria 2295
155 Ga0316584_0260048 3300036712 Bacteria 1266
156 Ga0436365_0746000 3300039437 Bacteria 10780
157 Ga0451577_0000070 3300042876 Bacteria 238621
158 Ga0451577_0112913 3300042876 Bacteria 2432
159 Ga0451577_0413129 3300042876 Bacteria 1225
160 Ga0453684_0002051 3300044712 Bacteria 51267
161 Ga0453684_0018213 3300044712 Bacteria 10800
162 Ga0453684_0090399 3300044712 Bacteria 3783
163 Ga0453684_0576905 3300044712 Bacteria 1236
164 Ga0451576_0008638 3300045051 Bacteria 11931
165 Ga0451576_0015476 3300045051 Bacteria 8449
166 Ga0451576_0352907 3300045051 Unclassified 1540
167 Ga0495621_0078471 3300046539 Bacteria 1228
168 Ga0495672_0018508 3300047320 Bacteria 4620
169 Ga0495615_0014929 3300048090 Bacteria 1650
170 Ga0496102_0031778 3300048905 Unclassified 4739
171 Ga0496103_0027813 3300048906 Unclassified 3429
172 Ga0496114_0000005 3300048917 Bacteria 564262
173 Ga0496116_0012471 3300048919 Bacteria 6944
174 Ga0496117_0000106 3300048920 Bacteria 188425
175 Ga0496118_0000005 3300048921 Bacteria 697350
176 Ga0496119_0005049 3300048922 Bacteria 12829
177 Ga0496119_0009196 3300048922 Bacteria 8529
178 Ga0496120_0001400 3300048923 Bacteria 29184
179 Ga0496121_0001609 3300048924 Bacteria 37475
180 Ga0496125_0001081 3300048928 Bacteria 41966
181 Ga0496125_0003548 3300048928 Bacteria 18792
182 Ga0496125_0012057 3300048928 Bacteria 8601
183 Ga0496126_0018353 3300048929 Bacteria 6934
184 Ga0501067_0007205 3300049583 Bacteria 6178
185 Ga0501075_0059073 3300049591 Bacteria 2888
186 Ga0501075_0116326 3300049591 Bacteria 2033
187 Ga0501077_0007358 3300049593 Bacteria 6789
188 Ga0501080_0009611 3300049742 Bacteria 8828
189 Ga0501083_0000636 3300049744 Bacteria 22717
190 nmdc:mga0yw44_3872_c1 3300050492 Bacteria 6739
191 nmdc:mga07m45_57389_c1 3300050496 Bacteria 2201
192 nmdc:mga06r32_7098_c1 3300050510 Bacteria 10087
193 nmdc:mga08y16_2900_c1 3300050511 Bacteria 17637
194 nmdc:mga0n895_147967_c1 3300050512 Bacteria 2378
195 nmdc:mga0n895_342270_c1 3300050512 Bacteria 1515
196 nmdc:mga0rr50_7831_c1 3300050513 Bacteria 6622
197 nmdc:mga08x19_11964_c1 3300050514 Bacteria 5222
198 Ga0500637_0012789 3300053178 Unclassified 4382
199 Ga0500637_0049004 3300053178 Unclassified 2404
200 Ga0501082_0001778 3300060353 Bacteria 18956
201 2898908527 2898907183 Bacteria 4067722
202 Ga0316576_10089045
203 rootH1_10079489
204 rootH1_10190865
205 Ga0055531_10000232
206 Ga0070676_10023364
207 Ga0070690_100006785
208 Ga0070690_100086198
209 Ga0070666_10011480
210 Ga0070669_100000006
211 Ga0070675_100027400
212 Ga0070688_100118533
213 Ga0070659_100092960
214 Ga0070667_100008257
215 Ga0070667_100057299
216 Ga0070667_100085877
217 Ga0070667_100100471
218 Ga0070663_100109275
219 Ga0070678_100007509
220 Ga0070662_100079511
221 Ga0068867_100015552
222 Ga0070685_10056729
223 Ga0070685_10175164
224 Ga0070698_100032857
225 Ga0070698_100229116
226 Ga0068853_100234530
227 Ga0070672_100018404
228 Ga0070686_100029655
229 Ga0070686_100029760
230 Ga0070686_100085419
231 Ga0070665_100000855
232 Ga0070665_100126197
233 Ga0068859_100000591
234 Ga0068859_100036634
235 Ga0068859_100048077
236 Ga0068859_100116911
237 Ga0068866_10023164
238 Ga0068866_10137084
239 Ga0068861_100018294
240 Ga0068861_100102174
241 Ga0068851_10000117
242 Ga0068863_100007797
243 Ga0068863_100053488
244 Ga0068858_100001627
245 Ga0068858_100013318
246 Ga0068860_100000969
247 Ga0068860_100006476
248 Ga0068862_100003752
249 Ga0075365_10038156
250 Ga0075368_10034773
251 Ga0075363_100007058
252 Ga0075364_10046720
253 Ga0070716_100034565
254 Ga0075362_10040741
255 Ga0075367_10002316
256 Ga0075366_10001701
257 Ga0075434_100089964
258 Ga0068865_100014623
259 Ga0097620_100000591
260 Ga0097620_100036634
261 Ga0097620_100048070
262 Ga0097620_100116905
263 Ga0075435_100051373
264 Ga0099795_10000116
265 Ga0105240_10076649
266 Ga0111539_10000953
267 Ga0105247_10004683
268 Ga0105247_10051036
269 Ga0114129_10227114
270 Ga0105248_10011856
271 Ga0105238_10036608
272 Ga0105249_10036617
273 Ga0105249_10131813
274 Ga0105249_10136282
275 Ga0099796_10001092
276 Ga0157374_10215866
277 Ga0163162_10021516
278 Ga0163162_10117324
279 Ga0163162_10162674
280 Ga0157375_10234514
281 Ga0163163_10089274
282 Ga0163163_10328977
283 Ga0157380_10054062
284 Ga0157377_10084636
285 Ga0157379_10005772
286 Ga0157379_10288771
287 Ga0163161_10114119
288 Ga0209257_1000006
289 Ga0207656_10000718
290 Ga0207710_10000196
291 Ga0207710_10026603
292 Ga0207680_10012812
293 Ga0207680_10076948
294 Ga0207645_10023462
295 Ga0207684_10022723
296 Ga0207654_10089812
297 Ga0207695_10076456
298 Ga0207695_10105905
299 Ga0207671_10102096
300 Ga0207662_10016042
301 Ga0207646_10005213
302 Ga0207681_10000006
303 Ga0207650_10019004
304 Ga0207659_10041153
305 Ga0207644_10004075
306 Ga0207706_10135837
307 Ga0207665_10020311
308 Ga0207665_10146595
309 Ga0207691_10009914
310 Ga0207711_10073497
311 Ga0207689_10063329
312 Ga0207712_10059788
313 Ga0207640_10072518
314 Ga0207658_10003903
315 Ga0207658_10027323
316 Ga0207658_10064935
317 Ga0207703_10001694
318 Ga0207703_10001976
319 Ga0207678_10014375
320 Ga0207678_10044164
321 Ga0207702_10069547
322 Ga0207641_10000247
323 Ga0207641_10044311
324 Ga0207641_10120054
325 Ga0207648_10001115
326 Ga0207648_10339689
327 Ga0207674_10208611
328 Ga0207675_100029477
329 Ga0209179_1000464
330 Ga0207428_10000410
331 Ga0207428_10000852
332 Ga0268266_10005870
333 Ga0268266_10022057
334 Ga0268266_10274856
335 Ga0268265_10025758
336 Ga0268265_10231347
337 Ga0268264_10000057
338 Ga0268264_10000165
339 Ga0268264_10001875
340 Ga0268264_10015515
341 Ga0307515_10000003
342 Ga0307515_10097939
343 Ga0307511_10021103
344 Ga0265765_1000897
345 Ga0265760_10005281
346 Ga0265316_10101873
347 Ga0307509_10000013
348 Ga0307508_10005475
349 Ga0316578_10058829
350 Ga0307510_10000014
351 Ga0373929_0000003
352 Ga0373936_0015974
353 Ga0373961_0001851
354 Ga0373935_0000876
355 Ga0373937_0136354
356 Ga0316584_0260048
357 Ga0436365_0746000
358 Ga0451577_0000070
359 Ga0451577_0112913
360 Ga0451577_0413129
361 Ga0453684_0002051
362 Ga0453684_0018213
363 Ga0453684_0090399
364 Ga0453684_0576905
365 Ga0451576_0008638
366 Ga0451576_0015476
367 Ga0451576_0352907
368 Ga0495621_0078471
369 Ga0495672_0018508
370 Ga0495615_0014929
371 Ga0496102_0031778
372 Ga0496103_0027813
373 Ga0496114_0000005
374 Ga0496116_0012471
375 Ga0496117_0000106
376 Ga0496118_0000005
377 Ga0496119_0005049
378 Ga0496119_0009196
379 Ga0496120_0001400
380 Ga0496121_0001609
381 Ga0496125_0001081
382 Ga0496125_0003548
383 Ga0496125_0012057
384 Ga0496126_0018353
385 Ga0501067_0007205
386 Ga0501075_0059073
387 Ga0501075_0116326
388 Ga0501077_0007358
389 Ga0501080_0009611
390 Ga0501083_0000636
391 nmdc:mga0yw44_3872_c1
392 nmdc:mga07m45_57389_c1
393 nmdc:mga06r32_7098_c1
394 nmdc:mga08y16_2900_c1
395 nmdc:mga0n895_147967_c1
396 nmdc:mga0n895_342270_c1
397 nmdc:mga0rr50_7831_c1
398 nmdc:mga08x19_11964_c1
399 Ga0500637_0012789
400 Ga0500637_0049004
401 Ga0501082_0001778
402 2898908527

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

305

411

0.95

PF00266

Aminotran_5

Aminotransferase class-V

26

302

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rw3-assembly1.cif.gz_A-2 e. coli cysteine desulfurase sufs n99d 0.9569 12 412
5vpr-assembly1.cif.gz_A crystal structure of cysteine desulfurase from elizabethkingia anophelis with covalently bound pyridoxal phosphate 0.9446 7 409
7rw3-assembly1.cif.gz_A-2 e. coli cysteine desulfurase sufs n99d 0.9399 12 412
3cai-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis rv3778c protein 0.9382 12 409
7yb3-assembly1.cif.gz_A-2 sufs with d-cysteine for 1 min 0.9319 12 410
ID Description Score Start End Superfamily
af_P9WQ69_308_406_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9653 308 405 3.90.1150.10
af_A0A368UH16_90_350_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.959 43 287 3.40.640.10
1i29A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9482 46 284 3.40.640.10
1t3iB01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9449 308 412 3.90.1150.10
af_P9WQ67_32_395_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9404 45 408 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A2D5QJV2-F1-model_v4 Cysteine desulfurase-like protein 0.9858 12 409
AF-A0A6L8GAV7-F1-model_v4 Cysteine desulfurase-like protein 0.978 16 366
AF-A0A526Z835-F1-model_v4 Cysteine desulfurase-like protein 0.977 47 410
AF-A0A530LNQ7-F1-model_v4 Cysteine desulfurase-like protein 0.9749 16 287
AF-A0A662DF41-F1-model_v4 Cysteine desulfurase-like protein 0.9739 12 414

Map