F308798

General Info

Members Datasets Scaffolds Average Seq Length
201 138 402 240

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0198729|Ga0436365_0198729_635_1438
Length 267
Sequence MPGSALRLLKAERRAARLPGRAQGVRRDMQFIEAPSPNFDARTAPPDMIVLHYTGMPSGEAALARLRDPAAEVSAHYMVEEDGRIFRLVPEERRAWHAGVSFWRGRTALNGVSIGIEIVNPGLEWGYRPFPDVQIHAVIELVGDIRSRWIVRDGDIVGHSDIAPDRKEDPGELFPWRTLAEAGHGLWTDVGAAPGAPLAEGETGPGVFALQAGLTRLGYDCAPSGEYEPRTTTIVRAFQRHWRPRQVDGIADGETRARLMALLRLGA

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
69 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
70 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
71 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
72 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
73 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
74 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
75 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
95 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
96 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
97 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
98 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
99 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
102 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
103 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
123 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
126 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
127 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
128 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
129 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
130 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
131 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
132 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
133 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
134 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
135 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
136 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 2842775625 Roseomonas sp. R-71825 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.5
Metatranscriptomes 0
Isolates 0.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.44
Nodule 0
Rhizoplane 0.5
Rhizosphere 79.6
Stem 0
Stem Tuber 0
Unclassified 0.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0198729 3300039437 Bacteria 2381
2 JGI25406J46586_10001457 3300003203 Bacteria 11149
3 Ga0070658_10020218 3300005327 Bacteria 5334
4 Ga0070670_100020675 3300005331 Bacteria 5661
5 Ga0070668_100001199 3300005347 Bacteria 18394
6 Ga0070668_100016860 3300005347 Bacteria 5463
7 Ga0070668_100019069 3300005347 Bacteria 5157
8 Ga0070669_100001614 3300005353 Bacteria 16298
9 Ga0070669_100411811 3300005353 Bacteria 1108
10 Ga0070671_100001428 3300005355 Bacteria 17826
11 Ga0070671_100219473 3300005355 Bacteria 1613
12 Ga0070667_100003650 3300005367 Bacteria 13091
13 Ga0070667_100004138 3300005367 Bacteria 12264
14 Ga0070667_100165861 3300005367 Bacteria 1948
15 Ga0070710_10016942 3300005437 Bacteria 3720
16 Ga0070711_100033337 3300005439 Bacteria 3429
17 Ga0070679_100075325 3300005530 Bacteria 3364
18 Ga0070679_100149492 3300005530 Bacteria 2313
19 Ga0070665_100256751 3300005548 Bacteria 1749
20 Ga0068855_100113367 3300005563 Bacteria 3110
21 Ga0068856_100174541 3300005614 Bacteria 2162
22 Ga0068859_100000075 3300005617 Bacteria 91974
23 Ga0068859_100077866 3300005617 Bacteria 3356
24 Ga0068859_100248330 3300005617 Bacteria 1869
25 Ga0068864_100000690 3300005618 Bacteria 28244
26 Ga0068863_100000137 3300005841 Bacteria 77716
27 Ga0068863_100004412 3300005841 Bacteria 13873
28 Ga0068863_100048754 3300005841 Bacteria 4016
29 Ga0068858_100005531 3300005842 Bacteria 12372
30 Ga0068858_100107165 3300005842 Bacteria 2608
31 Ga0068858_100143391 3300005842 Bacteria 2243
32 Ga0068858_100264614 3300005842 Bacteria 1635
33 Ga0068860_100000051 3300005843 Bacteria 208179
34 Ga0068860_100004177 3300005843 Bacteria 14803
35 Ga0068860_100008846 3300005843 Bacteria 10030
36 Ga0068862_100189144 3300005844 Bacteria 1851
37 Ga0068862_100584825 3300005844 Bacteria 1070
38 Ga0081539_10000207 3300005985 Bacteria 136970
39 Ga0070717_10483408 3300006028 Bacteria 1118
40 Ga0075364_10000232 3300006051 Bacteria 26442
41 Ga0075367_10003013 3300006178 Bacteria 7886
42 Ga0075366_10027571 3300006195 Bacteria 3333
43 Ga0097621_100087278 3300006237 Bacteria 2605
44 Ga0075370_10048210 3300006353 Bacteria 2413
45 Ga0097620_100000075 3300006931 Bacteria 91974
46 Ga0097620_100077869 3300006931 Bacteria 3356
47 Ga0097620_100248334 3300006931 Bacteria 1869
48 Ga0105240_10057640 3300009093 Bacteria 4851
49 Ga0105245_10309529 3300009098 Bacteria 1553
50 Ga0105241_10061052 3300009174 Bacteria 2902
51 Ga0105242_10012453 3300009176 Bacteria 6549
52 Ga0105248_10017019 3300009177 Bacteria 8007
53 Ga0105249_10257571 3300009553 Bacteria 1732
54 Ga0105246_10171476 3300011119 Bacteria 1662
55 Ga0157369_11141208 3300013105 Bacteria 796
56 Ga0157374_10520585 3300013296 Bacteria 1195
57 Ga0163162_10294328 3300013306 Bacteria 1755
58 Ga0157372_10003755 3300013307 Bacteria 16310
59 Ga0157372_10044321 3300013307 Bacteria 4928
60 Ga0157372_10163418 3300013307 Bacteria 2574
61 Ga0157372_10484222 3300013307 Bacteria 1442
62 Ga0163163_10014142 3300014325 Bacteria 7329
63 Ga0182008_10102439 3300014497 Bacteria 1416
64 Ga0157379_10000104 3300014968 Bacteria 57987
65 Ga0157376_10068598 3300014969 Bacteria 3003
66 Ga0213874_10032280 3300021377 Bacteria 1519
67 Ga0213876_10000521 3300021384 Bacteria 29455
68 Ga0213876_10057906 3300021384 Bacteria 2046
69 Ga0213875_10001101 3300021388 Bacteria 18742
70 Ga0213875_10093058 3300021388 Bacteria 1406
71 Ga0209233_1038524 3300025261 Bacteria 1054
72 Ga0207705_10044855 3300025909 Bacteria 3177
73 Ga0207695_10281459 3300025913 Bacteria 1557
74 Ga0207652_10071315 3300025921 Bacteria 3019
75 Ga0207681_10163263 3300025923 Bacteria 1681
76 Ga0207650_10014930 3300025925 Bacteria 5403
77 Ga0207644_10002775 3300025931 Bacteria 11276
78 Ga0207644_10239557 3300025931 Bacteria 1444
79 Ga0207706_10216684 3300025933 Bacteria 1677
80 Ga0207686_10005860 3300025934 Bacteria 6592
81 Ga0207711_10004186 3300025941 Bacteria 12357
82 Ga0207667_10123549 3300025949 Bacteria 2667
83 Ga0207667_10838028 3300025949 Bacteria 914
84 Ga0207668_10000333 3300025972 Bacteria 30476
85 Ga0207668_10003729 3300025972 Bacteria 8965
86 Ga0207668_10013324 3300025972 Bacteria 5058
87 Ga0207658_10008193 3300025986 Bacteria 7118
88 Ga0207658_10018484 3300025986 Bacteria 4813
89 Ga0207658_10358133 3300025986 Bacteria 1272
90 Ga0207703_10012677 3300026035 Bacteria 6574
91 Ga0207703_10168526 3300026035 Bacteria 1924
92 Ga0207702_10063192 3300026078 Bacteria 3165
93 Ga0207641_10000019 3300026088 Bacteria 295899
94 Ga0207641_10001345 3300026088 Bacteria 24348
95 Ga0207641_10012270 3300026088 Bacteria 7031
96 Ga0268265_10003856 3300028380 Bacteria 10603
97 Ga0268264_10000021 3300028381 Bacteria 481580
98 Ga0268264_10006276 3300028381 Bacteria 10022
99 Ga0268264_10015791 3300028381 Bacteria 6182
100 Ga0265338_10107850 3300028800 Bacteria 2251
101 Ga0265338_10146300 3300028800 Unclassified 1843
102 Ga0265340_10001639 3300031247 Bacteria 12859
103 Ga0265340_10163184 3300031247 Bacteria 1012
104 Ga0265327_10000708 3300031251 Bacteria 52766
105 Ga0307513_10012637 3300031456 Bacteria 10406
106 Ga0307516_10000010 3300031730 Bacteria 229720
107 Ga0373926_0123281 3300035083 Bacteria 978
108 Ga0373936_0090840 3300035113 Bacteria 1280
109 Ga0373945_0026068 3300035116 Bacteria 2035
110 Ga0373945_0062962 3300035116 Bacteria 1388
111 Ga0373943_0069351 3300035170 Bacteria 1782
112 Ga0373946_0088957 3300035171 Bacteria 1365
113 Ga0373955_0054327 3300035172 Bacteria 2190
114 Ga0373935_0030774 3300035692 Bacteria 3327
115 Ga0373927_0029831 3300035695 Bacteria 3557
116 Ga0373927_0422208 3300035695 Bacteria 880
117 Ga0373937_0081948 3300036401 Bacteria 2985
118 Ga0373925_0056182 3300037068 Bacteria 2948
119 Ga0373925_0175182 3300037068 Bacteria 1695
120 Ga0395899_0193637 3300037312 Bacteria 1421
121 Ga0395900_0140640 3300037418 Bacteria 2472
122 Ga0395898_0220403 3300037466 Bacteria 1809
123 Ga0395905_0040926 3300037471 Bacteria 4347
124 Ga0395905_0164533 3300037471 Bacteria 2084
125 Ga0436364_0664945 3300037853 Bacteria 22286
126 Ga0436364_0747587 3300037853 Bacteria 2172
127 Ga0436364_0797264 3300037853 Bacteria 3827
128 Ga0436364_1157052 3300037853 Bacteria 4714
129 Ga0395901_0337365 3300038443 Bacteria 1557
130 Ga0436365_0469552 3300039437 Bacteria 4436
131 Ga0436365_1585346 3300039437 Bacteria 971
132 Ga0436365_1935268 3300039437 Bacteria 135877
133 Ga0436363_1547830 3300039450 Bacteria 9514
134 Ga0436362_0421713 3300039453 Bacteria 2122
135 Ga0466957_0138121 3300044842 Bacteria 1568
136 Ga0451576_1227945 3300045051 Bacteria 782
137 Ga0466958_0160818 3300045836 Bacteria 1419
138 Ga0495629_0028112 3300046459 Bacteria 3993
139 Ga0495606_0096956 3300046507 Bacteria 1803
140 Ga0495608_0187483 3300046511 Bacteria 1307
141 Ga0495610_0045948 3300046512 Bacteria 2158
142 Ga0495643_0009036 3300046522 Bacteria 6249
143 Ga0495622_0057124 3300046557 Bacteria 1809
144 Ga0495657_0415817 3300046675 Bacteria 790
145 Ga0495669_0075345 3300046684 Bacteria 1544
146 Ga0495624_0233499 3300046690 Bacteria 1114
147 Ga0495674_0255399 3300047319 Bacteria 1441
148 Ga0495684_0069497 3300047471 Bacteria 2678
149 Ga0495686_0000025 3300047472 Bacteria 388098
150 Ga0495602_0299124 3300048088 Bacteria 1178
151 Ga0496115_0442349 3300048918 Bacteria 1051
152 Ga0501032_0010827 3300049569 Bacteria 6565
153 Ga0501032_0170150 3300049569 Bacteria 1429
154 Ga0501034_0033375 3300049571 Bacteria 5222
155 Ga0501034_0093190 3300049571 Bacteria 3008
156 Ga0501036_0004085 3300049572 Bacteria 11747
157 Ga0501036_0308078 3300049572 Bacteria 1324
158 Ga0501037_0052475 3300049573 Bacteria 2982
159 Ga0501038_0065834 3300049574 Bacteria 3087
160 Ga0501047_0032399 3300049581 Bacteria 5045
161 Ga0501047_0042745 3300049581 Bacteria 4378
162 Ga0501047_0333560 3300049581 Bacteria 1355
163 Ga0501067_0000080 3300049583 Bacteria 55864
164 Ga0501067_0046486 3300049583 Bacteria 2409
165 Ga0501068_0000441 3300049584 Bacteria 21124
166 Ga0501068_0362627 3300049584 Bacteria 932
167 Ga0501070_0324802 3300049586 Bacteria 1251
168 Ga0501072_0062488 3300049588 Bacteria 2938
169 Ga0501073_0000008 3300049589 Bacteria 204458
170 Ga0501073_0001991 3300049589 Bacteria 15236
171 Ga0501077_0000013 3300049593 Bacteria 91207
172 Ga0501080_0000649 3300049742 Bacteria 27567
173 Ga0501080_0009016 3300049742 Bacteria 9079
174 Ga0501083_0007620 3300049744 Bacteria 7671
175 Ga0501083_0120868 3300049744 Bacteria 1718
176 Ga0501044_0001866 3300049823 Bacteria 24428
177 Ga0501044_0197716 3300049823 Bacteria 1970
178 Ga0501044_0282899 3300049823 Bacteria 1591
179 nmdc:mga00v17_1157_c1 3300050491 Bacteria 13857
180 nmdc:mga0k408_44971_c1 3300050493 Bacteria 2547
181 nmdc:mga04h51_81613_c1 3300050495 Bacteria 1149
182 nmdc:mga07m45_68807_c1 3300050496 Bacteria 2013
183 Ga0495601_0120701 3300053077 Bacteria 1702
184 Ga0500651_0022084 3300053093 Bacteria 3974
185 Ga0500566_0041097 3300053094 Bacteria 2672
186 Ga0500555_002007 3300053103 Bacteria 6003
187 Ga0500595_000693 3300053119 Bacteria 20109
188 Ga0500595_005219 3300053119 Bacteria 5694
189 Ga0500595_051708 3300053119 Bacteria 1271
190 Ga0500608_000608 3300053122 Bacteria 13180
191 Ga0500658_0020063 3300053134 Bacteria 2520
192 Ga0500559_0015059 3300053136 Bacteria 3269
193 Ga0500590_029908 3300053148 Bacteria 2826
194 Ga0500638_131475 3300053162 Bacteria 1134
195 Ga0500639_107198 3300053163 Bacteria 1365
196 Ga0500637_0054877 3300053178 Bacteria 2275
197 Ga0500596_000539 3300053735 Bacteria 7175
198 Ga0501082_0066167 3300060353 Bacteria 3112
199 Ga0501082_0163650 3300060353 Bacteria 1933
200 Ga0501082_0739834 3300060353 Bacteria 861
201 2842775844 2842775625 Bacteria 5587290
202 Ga0436365_0198729
203 JGI25406J46586_10001457
204 Ga0070658_10020218
205 Ga0070670_100020675
206 Ga0070668_100001199
207 Ga0070668_100016860
208 Ga0070668_100019069
209 Ga0070669_100001614
210 Ga0070669_100411811
211 Ga0070671_100001428
212 Ga0070671_100219473
213 Ga0070667_100003650
214 Ga0070667_100004138
215 Ga0070667_100165861
216 Ga0070710_10016942
217 Ga0070711_100033337
218 Ga0070679_100075325
219 Ga0070679_100149492
220 Ga0070665_100256751
221 Ga0068855_100113367
222 Ga0068856_100174541
223 Ga0068859_100000075
224 Ga0068859_100077866
225 Ga0068859_100248330
226 Ga0068864_100000690
227 Ga0068863_100000137
228 Ga0068863_100004412
229 Ga0068863_100048754
230 Ga0068858_100005531
231 Ga0068858_100107165
232 Ga0068858_100143391
233 Ga0068858_100264614
234 Ga0068860_100000051
235 Ga0068860_100004177
236 Ga0068860_100008846
237 Ga0068862_100189144
238 Ga0068862_100584825
239 Ga0081539_10000207
240 Ga0070717_10483408
241 Ga0075364_10000232
242 Ga0075367_10003013
243 Ga0075366_10027571
244 Ga0097621_100087278
245 Ga0075370_10048210
246 Ga0097620_100000075
247 Ga0097620_100077869
248 Ga0097620_100248334
249 Ga0105240_10057640
250 Ga0105245_10309529
251 Ga0105241_10061052
252 Ga0105242_10012453
253 Ga0105248_10017019
254 Ga0105249_10257571
255 Ga0105246_10171476
256 Ga0157369_11141208
257 Ga0157374_10520585
258 Ga0163162_10294328
259 Ga0157372_10003755
260 Ga0157372_10044321
261 Ga0157372_10163418
262 Ga0157372_10484222
263 Ga0163163_10014142
264 Ga0182008_10102439
265 Ga0157379_10000104
266 Ga0157376_10068598
267 Ga0213874_10032280
268 Ga0213876_10000521
269 Ga0213876_10057906
270 Ga0213875_10001101
271 Ga0213875_10093058
272 Ga0209233_1038524
273 Ga0207705_10044855
274 Ga0207695_10281459
275 Ga0207652_10071315
276 Ga0207681_10163263
277 Ga0207650_10014930
278 Ga0207644_10002775
279 Ga0207644_10239557
280 Ga0207706_10216684
281 Ga0207686_10005860
282 Ga0207711_10004186
283 Ga0207667_10123549
284 Ga0207667_10838028
285 Ga0207668_10000333
286 Ga0207668_10003729
287 Ga0207668_10013324
288 Ga0207658_10008193
289 Ga0207658_10018484
290 Ga0207658_10358133
291 Ga0207703_10012677
292 Ga0207703_10168526
293 Ga0207702_10063192
294 Ga0207641_10000019
295 Ga0207641_10001345
296 Ga0207641_10012270
297 Ga0268265_10003856
298 Ga0268264_10000021
299 Ga0268264_10006276
300 Ga0268264_10015791
301 Ga0265338_10107850
302 Ga0265338_10146300
303 Ga0265340_10001639
304 Ga0265340_10163184
305 Ga0265327_10000708
306 Ga0307513_10012637
307 Ga0307516_10000010
308 Ga0373926_0123281
309 Ga0373936_0090840
310 Ga0373945_0026068
311 Ga0373945_0062962
312 Ga0373943_0069351
313 Ga0373946_0088957
314 Ga0373955_0054327
315 Ga0373935_0030774
316 Ga0373927_0029831
317 Ga0373927_0422208
318 Ga0373937_0081948
319 Ga0373925_0056182
320 Ga0373925_0175182
321 Ga0395899_0193637
322 Ga0395900_0140640
323 Ga0395898_0220403
324 Ga0395905_0040926
325 Ga0395905_0164533
326 Ga0436364_0664945
327 Ga0436364_0747587
328 Ga0436364_0797264
329 Ga0436364_1157052
330 Ga0395901_0337365
331 Ga0436365_0469552
332 Ga0436365_1585346
333 Ga0436365_1935268
334 Ga0436363_1547830
335 Ga0436362_0421713
336 Ga0466957_0138121
337 Ga0451576_1227945
338 Ga0466958_0160818
339 Ga0495629_0028112
340 Ga0495606_0096956
341 Ga0495608_0187483
342 Ga0495610_0045948
343 Ga0495643_0009036
344 Ga0495622_0057124
345 Ga0495657_0415817
346 Ga0495669_0075345
347 Ga0495624_0233499
348 Ga0495674_0255399
349 Ga0495684_0069497
350 Ga0495686_0000025
351 Ga0495602_0299124
352 Ga0496115_0442349
353 Ga0501032_0010827
354 Ga0501032_0170150
355 Ga0501034_0033375
356 Ga0501034_0093190
357 Ga0501036_0004085
358 Ga0501036_0308078
359 Ga0501037_0052475
360 Ga0501038_0065834
361 Ga0501047_0032399
362 Ga0501047_0042745
363 Ga0501047_0333560
364 Ga0501067_0000080
365 Ga0501067_0046486
366 Ga0501068_0000441
367 Ga0501068_0362627
368 Ga0501070_0324802
369 Ga0501072_0062488
370 Ga0501073_0000008
371 Ga0501073_0001991
372 Ga0501077_0000013
373 Ga0501080_0000649
374 Ga0501080_0009016
375 Ga0501083_0007620
376 Ga0501083_0120868
377 Ga0501044_0001866
378 Ga0501044_0197716
379 Ga0501044_0282899
380 nmdc:mga00v17_1157_c1
381 nmdc:mga0k408_44971_c1
382 nmdc:mga04h51_81613_c1
383 nmdc:mga07m45_68807_c1
384 Ga0495601_0120701
385 Ga0500651_0022084
386 Ga0500566_0041097
387 Ga0500555_002007
388 Ga0500595_000693
389 Ga0500595_005219
390 Ga0500595_051708
391 Ga0500608_000608
392 Ga0500658_0020063
393 Ga0500559_0015059
394 Ga0500590_029908
395 Ga0500638_131475
396 Ga0500639_107198
397 Ga0500637_0054877
398 Ga0500596_000539
399 Ga0501082_0066167
400 Ga0501082_0163650
401 Ga0501082_0739834
402 2842775844

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01471

PG_binding_1

Putative peptidoglycan binding domain

203

259

0.96

PF01510

Amidase_2

N-acetylmuramoyl-L-alanine amidase

42

172

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2y28-assembly3.cif.gz_C crystal structure of se-met ampd derivative 0.8892 2 154
6ssc-assembly1.cif.gz_A n-acetylmuramoyl-l-alanine amidase lysc from clostridium intestinale urnw 0.82 2 153
2ar3-assembly1.cif.gz_C e90a mutant structure of plyl 0.7916 1 133
6fhg-assembly1.cif.gz_B crystal structure of the ts2631 endolysin from thermus scotoductus phage with the unique n-terminal moiety responsible for peptidoglycan anchoring 0.7789 8 155
6ssc-assembly1.cif.gz_A n-acetylmuramoyl-l-alanine amidase lysc from clostridium intestinale urnw 0.7697 2 153
ID Description Score Start End Superfamily
af_P75820_43_192_3.40.80.10 Alpha Beta;3-Layer(aba) Sandwich;Lysozyme-like;Peptidoglycan recognition protein-like 0.9318 18 157 3.40.80.10
4bxjA01 Alpha Beta;3-Layer(aba) Sandwich;Lysozyme-like;Peptidoglycan recognition protein-like 0.9262 18 157 3.40.80.10
4bpaB01 Alpha Beta;3-Layer(aba) Sandwich;Lysozyme-like;Peptidoglycan recognition protein-like 0.9257 18 156 3.40.80.10
4bpaB01 Alpha Beta;3-Layer(aba) Sandwich;Lysozyme-like;Peptidoglycan recognition protein-like 0.8762 18 156 3.40.80.10
4bj4B02 Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD 0.8749 166 212 1.10.101.10
ID Description Score Start End GO Terms
AF-A0A7V8AI62-F1-model_v4 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.998 1 92 GO:0005576
GO:0008745
GO:0009253
GO:0009254
GO:0071555
AF-A0A3B0S6L1-F1-model_v4 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.9948 2 160 GO:0005576
GO:0008745
GO:0009253
GO:0009254
GO:0019867
GO:0071555
AF-A0A7C2EYV7-F1-model_v4 deleted 0.9948 1 76
AF-A0A2D9MTV4-F1-model_v4 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.994 2 93 GO:0005576
GO:0008745
GO:0009253
GO:0009254
GO:0019867
GO:0071555
AF-A0A520HZP1-F1-model_v4 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.9927 2 120 GO:0005576
GO:0008745
GO:0009253
GO:0009254
GO:0019867
GO:0071555

Map