F308987
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 201 | 158 | 402 | 468 |
Family's Representative Sequence
| Representative Sequence | 3300048907|Ga0496104_0007804|Ga0496104_0007804_7228_8799 |
| Length | 523 |
| Sequence | VLATRANPNGRISLALCPKVQSVTPVAEARIDDYICAAFSASARAKGAANAESLQMADAYDLIVIGTGPGGYVCAIRAAQLGLKVAVVEKRATHGGTCLNVGCIPSKALLHASEAYEEAGHGFAAMGIEVAPTLDLARMLAFKDEGVKGNVDGVAYLLKKNKIDTFHGTGTILAPGRVGVTPGGGDRQELETKSIVIATGSDVARLPGIDIDEQTIVSSTGALTLPKVPKRLLVVGAGVIGLELGSVWRRLGSEVMVVEFLDHILPGTDAEVARTLQRILSKQGMSFKLGSKVTAIAHNAFGHKVAIEPAKGDGEGMMVDADVVLVAIGRVPYTGGLGLEAVGVKLDNRKRIVVDQHYQTDVPGIYAIGDVIAGPMLAHKAEDEGMAVAELLGGQAGHVNYDAIPNVIYTSPEVATVGKSEEDLKVAGIAYKVGKFPFTANGRAKVNKTTDGFVKILADAATDRVLGVHIIAAQASEMIAEAAVIMEFGGSAEDLARTCHAHPTLTEAVKEAALAVDKRAIHM |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 4 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 5 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 6 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 7 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 20 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 21 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 22 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 23 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 24 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 25 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 26 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 27 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 28 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 29 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 30 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 31 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 32 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 33 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 34 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 35 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 36 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 37 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 68 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 71 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 72 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 73 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 74 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 75 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 76 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 77 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 78 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 79 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 80 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 81 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 82 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 83 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 84 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 85 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 86 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 96 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 97 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 98 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 99 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 100 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 101 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 102 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 103 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 104 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 105 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 106 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 107 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 108 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 109 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 111 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 129 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 130 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 131 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 132 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 133 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 134 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 135 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 136 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 138 | 2597490356 | Azospirillum brasilense sp7 | Isolate | Unclassified |
| 139 | 2602042107 | Bradyrhizobium sp. NFR13 | Isolate | Rhizoplane |
| 140 | 2643221574 | Brevundimonas sp. Root608 | Isolate | Unclassified |
| 141 | 2643221651 | Afipia sp. Root123D2 | Isolate | Unclassified |
| 142 | 2643221663 | Brevundimonas sp. Root1279 | Isolate | Unclassified |
| 143 | 2643221699 | Brevundimonas sp. Root1423 | Isolate | Unclassified |
| 144 | 2739367756 | Asticcacaulis sp. CF398 | Isolate | Unclassified |
| 145 | 2821443989 | Inquilinus ginsengisoli 584 | Isolate | Unclassified |
| 146 | 2837678835 | Jiella endophytica CBS5Q-3 | Isolate | Unclassified |
| 147 | 2844533157 | Inquilinus sp. R-72501 v. 2 | Isolate | Unclassified |
| 148 | 2846952575 | Azospirillum brasilense sp7 | Isolate | Unclassified |
| 149 | 2848858292 | Azospirillum brasilense Az39 | Isolate | Unclassified |
| 150 | 2891633521 | Azoarcus rhizosphaerae CC-YHH848 | Isolate | Rhizosphere |
| 151 | 2893066018 | Tardiphaga sp. P9-11 | Isolate | Unclassified |
| 152 | 2897803580 | Azospirillum doebereinerae GSF71 | Isolate | Unclassified |
| 153 | 2909042592 | Labrys sp. LIt4 | Isolate | Nodule |
| 154 | 2920107658 | Aquisphaera insulae JC669 | Isolate | Rhizosphere |
| 155 | 2928972540 | Brevundimonas sp. 1080 | Isolate | Rhizosphere |
| 156 | 2941485952 | Brevundimonas faecalis 2814 | Isolate | Rhizosphere |
| 157 | 2977240413 | Brevundimonas vesicularis SORGH_AS 431 | Isolate | Unclassified |
| 158 | 8002060224 | Methylocystis sp. Sn-Cys | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.05 |
| Metatranscriptomes | 0 |
| Isolates | 10.95 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.95 |
| Nodule | 0.5 |
| Rhizoplane | 7.46 |
| Rhizosphere | 70.65 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.5 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0496104_0007804 | 3300048907 | Bacteria | 9485 |
| 2 | JGI25151J46595_10000876 | 3300003187 | Bacteria | 23755 |
| 3 | JGI25406J46586_10002743 | 3300003203 | Bacteria | 8290 |
| 4 | JGI25160J50197_1008409 | 3300003354 | Bacteria | 3935 |
| 5 | Ga0055532_1004937 | 3300003758 | Unclassified | 1936 |
| 6 | Ga0055536_1002629 | 3300003781 | Bacteria | 9998 |
| 7 | Ga0055531_10013020 | 3300003794 | Bacteria | 3865 |
| 8 | Ga0070689_100006825 | 3300005340 | Bacteria | 7942 |
| 9 | Ga0070675_100042982 | 3300005354 | Bacteria | 3692 |
| 10 | Ga0070703_10002594 | 3300005406 | Bacteria | 5208 |
| 11 | Ga0070705_100000025 | 3300005440 | Bacteria | 79976 |
| 12 | Ga0070694_100023768 | 3300005444 | Bacteria | 3947 |
| 13 | Ga0070663_100005221 | 3300005455 | Bacteria | 7692 |
| 14 | Ga0070681_10007457 | 3300005458 | Bacteria | 10691 |
| 15 | Ga0070699_100147122 | 3300005518 | Bacteria | 2082 |
| 16 | Ga0070696_100012573 | 3300005546 | Bacteria | 5682 |
| 17 | Ga0070665_100000789 | 3300005548 | Bacteria | 41665 |
| 18 | Ga0070704_100000267 | 3300005549 | Bacteria | 22856 |
| 19 | Ga0068857_100029184 | 3300005577 | Bacteria | 4868 |
| 20 | Ga0068857_100052586 | 3300005577 | Bacteria | 3614 |
| 21 | Ga0068856_100090785 | 3300005614 | Bacteria | 3039 |
| 22 | Ga0068859_100001168 | 3300005617 | Bacteria | 26848 |
| 23 | Ga0068859_100001891 | 3300005617 | Bacteria | 21328 |
| 24 | Ga0068859_100154182 | 3300005617 | Bacteria | 2374 |
| 25 | Ga0068864_100003937 | 3300005618 | Bacteria | 12230 |
| 26 | Ga0068866_10105541 | 3300005718 | Bacteria | 1562 |
| 27 | Ga0068863_100038908 | 3300005841 | Bacteria | 4526 |
| 28 | Ga0068863_100143389 | 3300005841 | Bacteria | 2284 |
| 29 | Ga0068863_100247049 | 3300005841 | Bacteria | 1723 |
| 30 | Ga0068858_100000593 | 3300005842 | Bacteria | 37871 |
| 31 | Ga0068858_100086027 | 3300005842 | Bacteria | 2925 |
| 32 | Ga0068858_100202237 | 3300005842 | Bacteria | 1878 |
| 33 | Ga0068860_100117232 | 3300005843 | Bacteria | 2548 |
| 34 | Ga0068862_100001629 | 3300005844 | Bacteria | 20435 |
| 35 | Ga0068862_100200987 | 3300005844 | Bacteria | 1797 |
| 36 | Ga0081455_10003738 | 3300005937 | Bacteria | 17390 |
| 37 | Ga0081455_10079916 | 3300005937 | Bacteria | 2683 |
| 38 | Ga0081540_1025264 | 3300005983 | Bacteria | 3424 |
| 39 | Ga0081539_10001292 | 3300005985 | Bacteria | 43995 |
| 40 | Ga0075430_100048575 | 3300006846 | Bacteria | 3583 |
| 41 | Ga0075431_100007538 | 3300006847 | Bacteria | 10834 |
| 42 | Ga0075431_100190310 | 3300006847 | Bacteria | 2102 |
| 43 | Ga0075431_100279193 | 3300006847 | Bacteria | 1691 |
| 44 | Ga0075431_100300307 | 3300006847 | Bacteria | 1622 |
| 45 | Ga0075433_10061366 | 3300006852 | Bacteria | 3293 |
| 46 | Ga0075434_100093396 | 3300006871 | Bacteria | 3012 |
| 47 | Ga0075429_100066441 | 3300006880 | Bacteria | 3140 |
| 48 | Ga0075429_100260098 | 3300006880 | Bacteria | 1519 |
| 49 | Ga0075436_100000183 | 3300006914 | Bacteria | 39280 |
| 50 | Ga0097620_100001168 | 3300006931 | Bacteria | 26848 |
| 51 | Ga0097620_100001891 | 3300006931 | Bacteria | 21328 |
| 52 | Ga0097620_100154182 | 3300006931 | Bacteria | 2374 |
| 53 | Ga0111539_10003972 | 3300009094 | Bacteria | 19428 |
| 54 | Ga0111539_10065218 | 3300009094 | Bacteria | 4304 |
| 55 | Ga0105241_10157685 | 3300009174 | Bacteria | 1863 |
| 56 | Ga0105248_10005444 | 3300009177 | Bacteria | 13994 |
| 57 | Ga0105237_10003504 | 3300009545 | Bacteria | 18625 |
| 58 | Ga0105238_10104193 | 3300009551 | Bacteria | 2818 |
| 59 | Ga0157370_10016116 | 3300013104 | Bacteria | 7576 |
| 60 | Ga0157369_10013250 | 3300013105 | Bacteria | 9330 |
| 61 | Ga0157374_10111284 | 3300013296 | Bacteria | 2634 |
| 62 | Ga0163162_10254152 | 3300013306 | Bacteria | 1889 |
| 63 | Ga0157375_10046011 | 3300013308 | Bacteria | 4251 |
| 64 | Ga0157375_10320432 | 3300013308 | Bacteria | 1715 |
| 65 | Ga0157379_10018101 | 3300014968 | Bacteria | 6208 |
| 66 | Ga0209147_100110 | 3300025229 | Bacteria | 146408 |
| 67 | Ga0209130_1007869 | 3300025284 | Bacteria | 3226 |
| 68 | Ga0209676_1000115 | 3300025292 | Bacteria | 205183 |
| 69 | Ga0209676_1003303 | 3300025292 | Bacteria | 10096 |
| 70 | Ga0209025_1001952 | 3300025294 | Bacteria | 23806 |
| 71 | Ga0209758_1042199 | 3300025297 | Bacteria | 1694 |
| 72 | Ga0207426_1000436 | 3300025302 | Bacteria | 67619 |
| 73 | Ga0209257_1000090 | 3300025304 | Bacteria | 274746 |
| 74 | Ga0207653_10002038 | 3300025885 | Bacteria | 6444 |
| 75 | Ga0207707_10098346 | 3300025912 | Bacteria | 2558 |
| 76 | Ga0207671_10024688 | 3300025914 | Bacteria | 4515 |
| 77 | Ga0207660_10001377 | 3300025917 | Bacteria | 16302 |
| 78 | Ga0207689_10000743 | 3300025942 | Bacteria | 31262 |
| 79 | Ga0207679_10044538 | 3300025945 | Bacteria | 3202 |
| 80 | Ga0207703_10004222 | 3300026035 | Bacteria | 11841 |
| 81 | Ga0207703_10014994 | 3300026035 | Bacteria | 6049 |
| 82 | Ga0207703_10236141 | 3300026035 | Bacteria | 1641 |
| 83 | Ga0207678_10004339 | 3300026067 | Bacteria | 12730 |
| 84 | Ga0207702_10110448 | 3300026078 | Bacteria | 2443 |
| 85 | Ga0207641_10068908 | 3300026088 | Bacteria | 3035 |
| 86 | Ga0207641_10108898 | 3300026088 | Bacteria | 2453 |
| 87 | Ga0207641_10183715 | 3300026088 | Bacteria | 1917 |
| 88 | Ga0207674_10003734 | 3300026116 | Bacteria | 18581 |
| 89 | Ga0207674_10079735 | 3300026116 | Bacteria | 3277 |
| 90 | Ga0207428_10008667 | 3300027907 | Bacteria | 9184 |
| 91 | Ga0207428_10016559 | 3300027907 | Bacteria | 6337 |
| 92 | Ga0268265_10004227 | 3300028380 | Bacteria | 10029 |
| 93 | Ga0268265_10197104 | 3300028380 | Bacteria | 1744 |
| 94 | Ga0268264_10036258 | 3300028381 | Bacteria | 4062 |
| 95 | Ga0268264_10228342 | 3300028381 | Bacteria | 1717 |
| 96 | Ga0265337_1003188 | 3300028556 | Bacteria | 7205 |
| 97 | Ga0265338_10012140 | 3300028800 | Bacteria | 9844 |
| 98 | Ga0265320_10000166 | 3300031240 | Bacteria | 55311 |
| 99 | Ga0265327_10001029 | 3300031251 | Bacteria | 39284 |
| 100 | Ga0265314_10034091 | 3300031711 | Bacteria | 3724 |
| 101 | Ga0316576_10013003 | 3300031727 | Bacteria | 5515 |
| 102 | Ga0316578_10053528 | 3300031728 | Bacteria | 2365 |
| 103 | Ga0307406_10000600 | 3300031901 | Bacteria | 20591 |
| 104 | Ga0307412_10001265 | 3300031911 | Bacteria | 14177 |
| 105 | Ga0307414_10008164 | 3300032004 | Bacteria | 5918 |
| 106 | Ga0307414_10054758 | 3300032004 | Bacteria | 2789 |
| 107 | Ga0307414_10079210 | 3300032004 | Bacteria | 2397 |
| 108 | Ga0373927_0000019 | 3300035695 | Bacteria | 139754 |
| 109 | Ga0373947_0151158 | 3300035725 | Bacteria | 1496 |
| 110 | Ga0373925_0001539 | 3300037068 | Bacteria | 19645 |
| 111 | Ga0395905_0001126 | 3300037471 | Bacteria | 33477 |
| 112 | Ga0453683_0000675 | 3300044673 | Bacteria | 36253 |
| 113 | Ga0451576_0009133 | 3300045051 | Bacteria | 11524 |
| 114 | Ga0451576_0010425 | 3300045051 | Bacteria | 10661 |
| 115 | Ga0451576_0076480 | 3300045051 | Bacteria | 3483 |
| 116 | Ga0451576_0484730 | 3300045051 | Bacteria | 1299 |
| 117 | Ga0495638_0008190 | 3300046460 | Bacteria | 7432 |
| 118 | Ga0495582_0069823 | 3300046473 | Bacteria | 1943 |
| 119 | Ga0495584_0034484 | 3300046491 | Bacteria | 2560 |
| 120 | Ga0495594_0068316 | 3300046499 | Bacteria | 1974 |
| 121 | Ga0495652_0062086 | 3300046529 | Bacteria | 3152 |
| 122 | Ga0495633_0000713 | 3300046558 | Bacteria | 30196 |
| 123 | Ga0495647_0004077 | 3300046681 | Bacteria | 4721 |
| 124 | Ga0495649_0000077 | 3300046694 | Bacteria | 84222 |
| 125 | Ga0495602_0182348 | 3300048088 | Bacteria | 1618 |
| 126 | Ga0496102_0001321 | 3300048905 | Bacteria | 22246 |
| 127 | Ga0496103_0023659 | 3300048906 | Bacteria | 3706 |
| 128 | Ga0496104_0028335 | 3300048907 | Bacteria | 5192 |
| 129 | Ga0496105_0021884 | 3300048908 | Bacteria | 5175 |
| 130 | Ga0496107_0122031 | 3300048910 | Bacteria | 1920 |
| 131 | Ga0496107_0187047 | 3300048910 | Bacteria | 1538 |
| 132 | Ga0496108_0061985 | 3300048911 | Bacteria | 3149 |
| 133 | Ga0496109_0017856 | 3300048912 | Bacteria | 6225 |
| 134 | Ga0496109_0185424 | 3300048912 | Bacteria | 1955 |
| 135 | Ga0496110_0033910 | 3300048913 | Bacteria | 4418 |
| 136 | Ga0496114_0239859 | 3300048917 | Bacteria | 1594 |
| 137 | Ga0496115_0001488 | 3300048918 | Bacteria | 16851 |
| 138 | Ga0496115_0091987 | 3300048918 | Bacteria | 2479 |
| 139 | Ga0496116_0060291 | 3300048919 | Bacteria | 2462 |
| 140 | Ga0496122_0008769 | 3300048925 | Bacteria | 10811 |
| 141 | Ga0496123_0000954 | 3300048926 | Bacteria | 44939 |
| 142 | Ga0496124_0181378 | 3300048927 | Bacteria | 1620 |
| 143 | Ga0496125_0002459 | 3300048928 | Bacteria | 24070 |
| 144 | Ga0501048_0000651 | 3300049582 | Bacteria | 24982 |
| 145 | Ga0501069_0077085 | 3300049585 | Bacteria | 1875 |
| 146 | Ga0501072_0054559 | 3300049588 | Bacteria | 3149 |
| 147 | Ga0501072_0080964 | 3300049588 | Bacteria | 2573 |
| 148 | Ga0501074_0146714 | 3300049590 | Bacteria | 1687 |
| 149 | Ga0501075_0125609 | 3300049591 | Bacteria | 1953 |
| 150 | Ga0501076_0007071 | 3300049592 | Bacteria | 8154 |
| 151 | Ga0501079_0055245 | 3300049741 | Bacteria | 3064 |
| 152 | Ga0501079_0085897 | 3300049741 | Bacteria | 2435 |
| 153 | Ga0501080_0042768 | 3300049742 | Bacteria | 4218 |
| 154 | Ga0501044_0006954 | 3300049823 | Bacteria | 12450 |
| 155 | Ga0501045_0071312 | 3300049824 | Bacteria | 2557 |
| 156 | Ga0501045_0084500 | 3300049824 | Bacteria | 2342 |
| 157 | nmdc:mga09592_35777_c1 | 3300050508 | Bacteria | 4158 |
| 158 | nmdc:mga0qj67_134691_c1 | 3300050509 | Bacteria | 2002 |
| 159 | nmdc:mga06r32_4066_c1 | 3300050510 | Bacteria | 13108 |
| 160 | nmdc:mga06r32_7170_c1 | 3300050510 | Bacteria | 10046 |
| 161 | nmdc:mga08y16_43053_c1 | 3300050511 | Bacteria | 4730 |
| 162 | nmdc:mga08y16_49509_c1 | 3300050511 | Bacteria | 4398 |
| 163 | nmdc:mga08y16_76193_c1 | 3300050511 | Bacteria | 3496 |
| 164 | nmdc:mga0n895_9939_c1 | 3300050512 | Bacteria | 8370 |
| 165 | nmdc:mga08x19_667_c1 | 3300050514 | Bacteria | 22044 |
| 166 | nmdc:mga0a205_77660_c1 | 3300050515 | Bacteria | 3208 |
| 167 | Ga0495601_0019798 | 3300053077 | Bacteria | 4108 |
| 168 | Ga0495655_0002833 | 3300053083 | Bacteria | 2792 |
| 169 | Ga0500644_0000885 | 3300053088 | Bacteria | 9769 |
| 170 | Ga0500644_0003634 | 3300053088 | Bacteria | 3825 |
| 171 | Ga0500651_0003609 | 3300053093 | Bacteria | 8490 |
| 172 | Ga0500556_0000627 | 3300053104 | Bacteria | 22286 |
| 173 | Ga0500593_000257 | 3300053117 | Bacteria | 21760 |
| 174 | Ga0500559_0002392 | 3300053136 | Bacteria | 9741 |
| 175 | Ga0500568_0000005 | 3300053139 | Bacteria | 614296 |
| 176 | Ga0500616_0003585 | 3300053153 | Bacteria | 11705 |
| 177 | Ga0500622_0001156 | 3300053156 | Bacteria | 21912 |
| 178 | Ga0501084_0042371 | 3300054114 | Bacteria | 3808 |
| 179 | Ga0501082_0002773 | 3300060353 | Bacteria | 15309 |
| 180 | 2599105322 | 2597490356 | Bacteria | 7030811 |
| 181 | 2603858612 | 2602042107 | Bacteria | 6226103 |
| 182 | 2643884455 | 2643221574 | Bacteria | 2789653 |
| 183 | 2644291741 | 2643221651 | Bacteria | 4798932 |
| 184 | 2644351520 | 2643221663 | Bacteria | 3425771 |
| 185 | 2644548936 | 2643221699 | Bacteria | 5731501 |
| 186 | 2644551676 | 2643221699 | Bacteria | 5731501 |
| 187 | 2739792644 | 2739367756 | Bacteria | 4553612 |
| 188 | 2821448746 | 2821443989 | Bacteria | 7658172 |
| 189 | 2837679273 | 2837678835 | Bacteria | 5252418 |
| 190 | 2844539110 | 2844533157 | Bacteria | 7517899 |
| 191 | 2846954996 | 2846952575 | Bacteria | 6587527 |
| 192 | 2848858711 | 2848858292 | Bacteria | 7391279 |
| 193 | 2891637423 | 2891633521 | Bacteria | 4602265 |
| 194 | 2893067465 | 2893066018 | Bacteria | 6158120 |
| 195 | 2897806218 | 2897803580 | Bacteria | 7000062 |
| 196 | 2909042595 | 2909042592 | Bacteria | 6499737 |
| 197 | 2920114109 | 2920107658 | Bacteria | 10042636 |
| 198 | 2928974286 | 2928972540 | Bacteria | 3058286 |
| 199 | 2941487797 | 2941485952 | Bacteria | 3591484 |
| 200 | 2977243218 | 2977240413 | Bacteria | 3191065 |
| 201 | 8002062262 | 8002060224 | Bacteria | 4026565 |
| 202 | Ga0496104_0007804 | |||
| 203 | JGI25151J46595_10000876 | |||
| 204 | JGI25406J46586_10002743 | |||
| 205 | JGI25160J50197_1008409 | |||
| 206 | Ga0055532_1004937 | |||
| 207 | Ga0055536_1002629 | |||
| 208 | Ga0055531_10013020 | |||
| 209 | Ga0070689_100006825 | |||
| 210 | Ga0070675_100042982 | |||
| 211 | Ga0070703_10002594 | |||
| 212 | Ga0070705_100000025 | |||
| 213 | Ga0070694_100023768 | |||
| 214 | Ga0070663_100005221 | |||
| 215 | Ga0070681_10007457 | |||
| 216 | Ga0070699_100147122 | |||
| 217 | Ga0070696_100012573 | |||
| 218 | Ga0070665_100000789 | |||
| 219 | Ga0070704_100000267 | |||
| 220 | Ga0068857_100029184 | |||
| 221 | Ga0068857_100052586 | |||
| 222 | Ga0068856_100090785 | |||
| 223 | Ga0068859_100001168 | |||
| 224 | Ga0068859_100001891 | |||
| 225 | Ga0068859_100154182 | |||
| 226 | Ga0068864_100003937 | |||
| 227 | Ga0068866_10105541 | |||
| 228 | Ga0068863_100038908 | |||
| 229 | Ga0068863_100143389 | |||
| 230 | Ga0068863_100247049 | |||
| 231 | Ga0068858_100000593 | |||
| 232 | Ga0068858_100086027 | |||
| 233 | Ga0068858_100202237 | |||
| 234 | Ga0068860_100117232 | |||
| 235 | Ga0068862_100001629 | |||
| 236 | Ga0068862_100200987 | |||
| 237 | Ga0081455_10003738 | |||
| 238 | Ga0081455_10079916 | |||
| 239 | Ga0081540_1025264 | |||
| 240 | Ga0081539_10001292 | |||
| 241 | Ga0075430_100048575 | |||
| 242 | Ga0075431_100007538 | |||
| 243 | Ga0075431_100190310 | |||
| 244 | Ga0075431_100279193 | |||
| 245 | Ga0075431_100300307 | |||
| 246 | Ga0075433_10061366 | |||
| 247 | Ga0075434_100093396 | |||
| 248 | Ga0075429_100066441 | |||
| 249 | Ga0075429_100260098 | |||
| 250 | Ga0075436_100000183 | |||
| 251 | Ga0097620_100001168 | |||
| 252 | Ga0097620_100001891 | |||
| 253 | Ga0097620_100154182 | |||
| 254 | Ga0111539_10003972 | |||
| 255 | Ga0111539_10065218 | |||
| 256 | Ga0105241_10157685 | |||
| 257 | Ga0105248_10005444 | |||
| 258 | Ga0105237_10003504 | |||
| 259 | Ga0105238_10104193 | |||
| 260 | Ga0157370_10016116 | |||
| 261 | Ga0157369_10013250 | |||
| 262 | Ga0157374_10111284 | |||
| 263 | Ga0163162_10254152 | |||
| 264 | Ga0157375_10046011 | |||
| 265 | Ga0157375_10320432 | |||
| 266 | Ga0157379_10018101 | |||
| 267 | Ga0209147_100110 | |||
| 268 | Ga0209130_1007869 | |||
| 269 | Ga0209676_1000115 | |||
| 270 | Ga0209676_1003303 | |||
| 271 | Ga0209025_1001952 | |||
| 272 | Ga0209758_1042199 | |||
| 273 | Ga0207426_1000436 | |||
| 274 | Ga0209257_1000090 | |||
| 275 | Ga0207653_10002038 | |||
| 276 | Ga0207707_10098346 | |||
| 277 | Ga0207671_10024688 | |||
| 278 | Ga0207660_10001377 | |||
| 279 | Ga0207689_10000743 | |||
| 280 | Ga0207679_10044538 | |||
| 281 | Ga0207703_10004222 | |||
| 282 | Ga0207703_10014994 | |||
| 283 | Ga0207703_10236141 | |||
| 284 | Ga0207678_10004339 | |||
| 285 | Ga0207702_10110448 | |||
| 286 | Ga0207641_10068908 | |||
| 287 | Ga0207641_10108898 | |||
| 288 | Ga0207641_10183715 | |||
| 289 | Ga0207674_10003734 | |||
| 290 | Ga0207674_10079735 | |||
| 291 | Ga0207428_10008667 | |||
| 292 | Ga0207428_10016559 | |||
| 293 | Ga0268265_10004227 | |||
| 294 | Ga0268265_10197104 | |||
| 295 | Ga0268264_10036258 | |||
| 296 | Ga0268264_10228342 | |||
| 297 | Ga0265337_1003188 | |||
| 298 | Ga0265338_10012140 | |||
| 299 | Ga0265320_10000166 | |||
| 300 | Ga0265327_10001029 | |||
| 301 | Ga0265314_10034091 | |||
| 302 | Ga0316576_10013003 | |||
| 303 | Ga0316578_10053528 | |||
| 304 | Ga0307406_10000600 | |||
| 305 | Ga0307412_10001265 | |||
| 306 | Ga0307414_10008164 | |||
| 307 | Ga0307414_10054758 | |||
| 308 | Ga0307414_10079210 | |||
| 309 | Ga0373927_0000019 | |||
| 310 | Ga0373947_0151158 | |||
| 311 | Ga0373925_0001539 | |||
| 312 | Ga0395905_0001126 | |||
| 313 | Ga0453683_0000675 | |||
| 314 | Ga0451576_0009133 | |||
| 315 | Ga0451576_0010425 | |||
| 316 | Ga0451576_0076480 | |||
| 317 | Ga0451576_0484730 | |||
| 318 | Ga0495638_0008190 | |||
| 319 | Ga0495582_0069823 | |||
| 320 | Ga0495584_0034484 | |||
| 321 | Ga0495594_0068316 | |||
| 322 | Ga0495652_0062086 | |||
| 323 | Ga0495633_0000713 | |||
| 324 | Ga0495647_0004077 | |||
| 325 | Ga0495649_0000077 | |||
| 326 | Ga0495602_0182348 | |||
| 327 | Ga0496102_0001321 | |||
| 328 | Ga0496103_0023659 | |||
| 329 | Ga0496104_0028335 | |||
| 330 | Ga0496105_0021884 | |||
| 331 | Ga0496107_0122031 | |||
| 332 | Ga0496107_0187047 | |||
| 333 | Ga0496108_0061985 | |||
| 334 | Ga0496109_0017856 | |||
| 335 | Ga0496109_0185424 | |||
| 336 | Ga0496110_0033910 | |||
| 337 | Ga0496114_0239859 | |||
| 338 | Ga0496115_0001488 | |||
| 339 | Ga0496115_0091987 | |||
| 340 | Ga0496116_0060291 | |||
| 341 | Ga0496122_0008769 | |||
| 342 | Ga0496123_0000954 | |||
| 343 | Ga0496124_0181378 | |||
| 344 | Ga0496125_0002459 | |||
| 345 | Ga0501048_0000651 | |||
| 346 | Ga0501069_0077085 | |||
| 347 | Ga0501072_0054559 | |||
| 348 | Ga0501072_0080964 | |||
| 349 | Ga0501074_0146714 | |||
| 350 | Ga0501075_0125609 | |||
| 351 | Ga0501076_0007071 | |||
| 352 | Ga0501079_0055245 | |||
| 353 | Ga0501079_0085897 | |||
| 354 | Ga0501080_0042768 | |||
| 355 | Ga0501044_0006954 | |||
| 356 | Ga0501045_0071312 | |||
| 357 | Ga0501045_0084500 | |||
| 358 | nmdc:mga09592_35777_c1 | |||
| 359 | nmdc:mga0qj67_134691_c1 | |||
| 360 | nmdc:mga06r32_4066_c1 | |||
| 361 | nmdc:mga06r32_7170_c1 | |||
| 362 | nmdc:mga08y16_43053_c1 | |||
| 363 | nmdc:mga08y16_49509_c1 | |||
| 364 | nmdc:mga08y16_76193_c1 | |||
| 365 | nmdc:mga0n895_9939_c1 | |||
| 366 | nmdc:mga08x19_667_c1 | |||
| 367 | nmdc:mga0a205_77660_c1 | |||
| 368 | Ga0495601_0019798 | |||
| 369 | Ga0495655_0002833 | |||
| 370 | Ga0500644_0000885 | |||
| 371 | Ga0500644_0003634 | |||
| 372 | Ga0500651_0003609 | |||
| 373 | Ga0500556_0000627 | |||
| 374 | Ga0500593_000257 | |||
| 375 | Ga0500559_0002392 | |||
| 376 | Ga0500568_0000005 | |||
| 377 | Ga0500616_0003585 | |||
| 378 | Ga0500622_0001156 | |||
| 379 | Ga0501084_0042371 | |||
| 380 | Ga0501082_0002773 | |||
| 381 | 2599105322 | |||
| 382 | 2603858612 | |||
| 383 | 2643884455 | |||
| 384 | 2644291741 | |||
| 385 | 2644351520 | |||
| 386 | 2644548936 | |||
| 387 | 2644551676 | |||
| 388 | 2739792644 | |||
| 389 | 2821448746 | |||
| 390 | 2837679273 | |||
| 391 | 2844539110 | |||
| 392 | 2846954996 | |||
| 393 | 2848858711 | |||
| 394 | 2891637423 | |||
| 395 | 2893067465 | |||
| 396 | 2897806218 | |||
| 397 | 2909042595 | |||
| 398 | 2920114109 | |||
| 399 | 2928974286 | |||
| 400 | 2941487797 | |||
| 401 | 2977243218 | |||
| 402 | 8002062262 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
PF02852
Pyr_redox_dim
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
404
513
0.99
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3urh-assembly1.cif.gz_A | crystal structure of a dihydrolipoamide dehydrogenase from sinorhizobium meliloti 1021 | 0.9902 | 8 | 460 |
| 5nhg-assembly3.cif.gz_F | crystal structure of the human dihydrolipoamide dehydrogenase | 0.9845 | 6 | 466 |
| 6i4s-assembly1.cif.gz_A | crystal structure of the disease-causing r447g mutant of the human dihydrolipoamide dehydrogenase | 0.9839 | 3 | 466 |
| 6hg8-assembly1.cif.gz_A | crystal structure of the r460g disease-causing mutant of the human dihydrolipoamide dehydrogenase. | 0.983 | 3 | 466 |
| 6i4t-assembly1.cif.gz_A | crystal structure of the disease-causing i445m mutant of the human dihydrolipoamide dehydrogenase | 0.9829 | 3 | 466 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1ebdA03 | Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.9829 | 347 | 456 | 3.30.390.30 |
| 1dxlB03 | Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.98 | 347 | 466 | 3.30.390.30 |
| af_A0A1D6LYX0_29_117_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9772 | 152 | 233 | 3.50.50.60 |
| 6bz0A03 | Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.9744 | 347 | 466 | 3.30.390.30 |
| af_P27306_345_465_3.30.390.30 | Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.9734 | 347 | 457 | 3.30.390.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3NV27-F1-model_v4 | deleted | 1.002 | 360 | 466 |
|
| AF-A0A353IKV2-F1-model_v4 | Dihydrolipoyl dehydrogenase (EC 1.8.1.4) | 1.002 | 373 | 466 |
GO:0004148
GO:0006090 GO:0006103 GO:0050660 |
| AF-A0A2P7P015-F1-model_v4 | deleted | 1.002 | 359 | 433 |
|
| AF-A0A2W6T7S9-F1-model_v4 | Dihydrolipoyl dehydrogenase (EC 1.8.1.4) | 0.9943 | 335 | 466 |
GO:0004148
GO:0005737 GO:0006090 GO:0006103 GO:0050660 |
| AF-A0A2V6LRS7-F1-model_v4 | Dihydrolipoyl dehydrogenase (EC 1.8.1.4) | 0.9926 | 289 | 466 |
GO:0004148
GO:0006090 GO:0006103 GO:0050660 |