F309082

General Info

Members Datasets Scaffolds Average Seq Length
201 144 402 482

Family's Representative Sequence

Representative Sequence 3300049744|Ga0501083_0001118|Ga0501083_0001118_14028_15743
Length 571
Sequence VNDRRDPALALLIFWQSFTARSDLSAAFGRARADEIVGAGRHRHGLVSAGVSPWRCSAMSKTSLTRNYLRAQKQLAPSLERGPSDMFPERVVQFGEGNFLRGFTGWMIDELNAKNLFRSHVLVAQPIRQGMAAALNEQDGIYTLLMRGVQNGRVVEARRIITASRRAVNPYDQWSELVAAFRGPDVRFVVSNTTEAGIAYVPEPCAHGVCPETFPAKITSLLHERFLAVRGATDKGLIFLPCELIDRNGDNLRRTVLQHAQAWALPPAFAAWVKNANYFLNTLVDRIVPGYPRAEAEKLAAELGYDDKLMVAAEYFHLWVIEGPRHLAHELPFTQAGLNVVWTDDMTPYRTRKVRVLNGAHTASVLAAHAAGLDTVRDMVEDAVFGRFLRQAVFDEILPCVNLPDEEKRAYAESVLERFRNPFVRHELLSIALNSVSKWKVRVLPSVLDYHAAHGALPPALVFSLAGLIWFYNGETVTANELRGWRGTQAYAIRDDAPVLAFFAEAWNTARRADCWHDLATATLARVDFWGRNLNEIPGFADAVAASLGGIAAHGVRAAVAGVLLKKPAQP

Samples

Sample ID Description Type Environment
1 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
9 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
10 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
11 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
12 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
13 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
14 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
15 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
20 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
21 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
22 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
23 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
24 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
25 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
26 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
32 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
33 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
34 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
39 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
40 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
43 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
47 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
61 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
62 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
63 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
64 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
70 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
71 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
72 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
73 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
74 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
75 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
76 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
77 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
78 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
79 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
80 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
81 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
82 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
83 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
84 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
85 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
86 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
87 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
88 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
89 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
90 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
91 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
92 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
93 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
94 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
95 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
96 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
97 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
98 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
99 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
100 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
101 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
102 2706794495 Dickeya zeae ZJU1202 Isolate Unclassified
103 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
104 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
105 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
106 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
107 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
108 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
109 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
110 2808606414 Pantoea sp. SJZ147 Isolate Rhizosphere
111 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
112 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
113 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
114 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
115 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
116 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
117 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
118 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
119 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
120 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
121 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
122 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
123 2919150387 Rahnella aceris 1817 Isolate Unclassified
124 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
125 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
126 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
127 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
128 2927143783 Rahnella sp. 2050 Isolate Unclassified
129 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
130 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
131 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
132 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
133 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
134 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
135 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
136 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
137 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
138 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
139 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
140 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
141 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
142 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
143 8055693939 Hafnia alvei A23BA Isolate Rhizosphere
144 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.64
Metatranscriptomes 0.5
Isolates 27.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.44
Nodule 2.49
Rhizoplane 1.49
Rhizosphere 55.72
Stem 0
Stem Tuber 0.5
Unclassified 1.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501083_0001118 3300049744 Bacteria 17960
2 SwRhRL2b_contig_294876 2162886007 Bacteria 9889
3 JGI24739J22299_10000543 3300001989 Bacteria 13459
4 JGI25162J39368_1000031 3300002737 Bacteria 210480
5 JGI25163J39215_1000071 3300002771 Bacteria 45957
6 JGI25164J39214_1000001 3300002772 Bacteria 477015
7 JGI25151J46595_10003897 3300003187 Bacteria 8051
8 Ga0006562J51391_1013616 3300003578 Bacteria 3243
9 Ga0055538_1000004 3300003751 Bacteria 615646
10 Ga0055539_1000004 3300003752 Bacteria 615646
11 Ga0055533_1000007 3300003756 Bacteria 615646
12 Ga0055525_1000007 3300003759 Bacteria 615646
13 Ga0055541_1000004 3300003841 Bacteria 615646
14 Ga0058692_1000363 3300003856 Bacteria 21895
15 Ga0065714_10071302 3300005288 Bacteria 3611
16 Ga0065704_10000063 3300005289 Bacteria 83161
17 Ga0070682_100012309 3300005337 Bacteria 4902
18 Ga0070668_100009448 3300005347 Bacteria 7234
19 Ga0099824_1005584 3300006942 Bacteria 17643
20 Ga0079104_1000119 3300006946 Bacteria 112250
21 Ga0099826_10058833 3300006948 Bacteria 2517
22 Ga0105251_10001197 3300009011 Bacteria 22454
23 Ga0105251_10058018 3300009011 Bacteria 1829
24 Ga0105244_10000022 3300009036 Bacteria 234186
25 Ga0105244_10001164 3300009036 Bacteria 21780
26 Ga0105244_10002281 3300009036 Bacteria 14564
27 Ga0105244_10003229 3300009036 Bacteria 11800
28 Ga0105250_10001495 3300009092 Bacteria 12607
29 Ga0157373_10000008 3300013100 Bacteria 216306
30 Ga0157373_10035200 3300013100 Bacteria 3596
31 Ga0157371_10000159 3300013102 Bacteria 98984
32 Ga0157371_10001807 3300013102 Bacteria 21623
33 Ga0157371_10001855 3300013102 Bacteria 21223
34 Ga0157370_10000341 3300013104 Bacteria 58841
35 Ga0157370_10006277 3300013104 Bacteria 13150
36 Ga0157370_10020779 3300013104 Bacteria 6551
37 Ga0157369_10003319 3300013105 Bacteria 19125
38 Ga0157369_10008135 3300013105 Bacteria 12026
39 Ga0163162_10012328 3300013306 Bacteria 8347
40 Ga0157375_10149229 3300013308 Bacteria 2472
41 Ga0182006_1026520 3300015261 Bacteria 2370
42 Ga0182006_1033548 3300015261 Bacteria 2057
43 Ga0163161_10000056 3300017792 Bacteria 114387
44 Ga0209760_100006 3300025207 Bacteria 224535
45 Ga0209784_100001 3300025224 Bacteria 3600592
46 Ga0209566_100001 3300025225 Bacteria 3600765
47 Ga0209674_100002 3300025226 Bacteria 3600592
48 Ga0209563_100008 3300025230 Bacteria 1554545
49 Ga0207427_100002 3300025231 Bacteria 1355321
50 Ga0209437_100114 3300025233 Bacteria 210697
51 Ga0209677_100004 3300025253 Bacteria 1554545
52 Ga0209676_1000347 3300025292 Bacteria 87634
53 Ga0209025_1011529 3300025294 Bacteria 5808
54 Ga0207696_1000737 3300025711 Bacteria 21893
55 Ga0207655_1000052 3300025728 Bacteria 291090
56 Ga0207655_1000222 3300025728 Bacteria 96831
57 Ga0207713_1006798 3300025735 Bacteria 6900
58 Ga0209281_1000238 3300027111 Bacteria 112268
59 Ga0209371_1000321 3300027312 Bacteria 52619
60 Ga0209489_119148 3300027361 Bacteria 2402
61 Ga0265338_10000030 3300028800 Bacteria 260974
62 Ga0265338_10000062 3300028800 Bacteria 196060
63 Ga0265325_10018363 3300031241 Unclassified 3877
64 Ga0307408_100006383 3300031548 Bacteria 7823
65 Ga0307405_10058595 3300031731 Bacteria 2424
66 Ga0307413_10000614 3300031824 Bacteria 11989
67 Ga0307410_10000577 3300031852 Bacteria 15046
68 Ga0307406_10000075 3300031901 Bacteria 54768
69 Ga0307412_10018953 3300031911 Bacteria 4154
70 Ga0307416_100001293 3300032002 Bacteria 13501
71 Ga0307414_10000002 3300032004 Bacteria 623006
72 Ga0307414_10001619 3300032004 Bacteria 11711
73 Ga0307414_10020392 3300032004 Bacteria 4131
74 Ga0307411_10000006 3300032005 Bacteria 382357
75 Ga0400483_004213 3300039062 Bacteria 16041
76 Ga0400483_126751 3300039062 Bacteria 27006
77 Ga0400483_250454 3300039062 Bacteria 22155
78 Ga0400489_83784 3300039093 Bacteria 8853
79 Ga0439447_011517 3300041407 Bacteria 2574
80 Ga0439466_0000559 3300041411 Bacteria 14012
81 Ga0439452_000009 3300042010 Bacteria 569493
82 Ga0451577_0000090 3300042876 Bacteria 202241
83 Ga0451577_0004605 3300042876 Bacteria 14488
84 Ga0451577_0177461 3300042876 Bacteria 1920
85 Ga0453683_0000005 3300044673 Bacteria 741657
86 Ga0453683_0002252 3300044673 Bacteria 15244
87 Ga0453683_0034635 3300044673 Bacteria 3183
88 Ga0453683_0059733 3300044673 Bacteria 2383
89 Ga0453684_0000322 3300044712 Bacteria 202241
90 Ga0453684_0000469 3300044712 Bacteria 160413
91 Ga0453684_0002121 3300044712 Bacteria 49974
92 Ga0453684_0020034 3300044712 Bacteria 10130
93 Ga0453684_0041239 3300044712 Bacteria 6249
94 Ga0453684_0061353 3300044712 Bacteria 4827
95 Ga0453684_0120145 3300044712 Unclassified 3174
96 Ga0453684_0180612 3300044712 Bacteria 2478
97 Ga0453684_0196981 3300044712 Bacteria 2351
98 Ga0451576_0000614 3300045051 Bacteria 74965
99 Ga0451576_0001114 3300045051 Bacteria 48965
100 Ga0451576_0002031 3300045051 Bacteria 31953
101 Ga0451576_0037052 3300045051 Bacteria 5168
102 Ga0451576_0101465 3300045051 Bacteria 2993
103 Ga0451576_0193941 3300045051 Unclassified 2122
104 Ga0495650_0000004 3300046471 Bacteria 779487
105 Ga0495660_0000022 3300046810 Bacteria 284337
106 Ga0495660_0041344 3300046810 Bacteria 2553
107 Ga0496104_0001477 3300048907 Bacteria 20281
108 Ga0496116_0000004 3300048919 Bacteria 839841
109 Ga0496116_0000016 3300048919 Bacteria 555146
110 Ga0496116_0000203 3300048919 Bacteria 114346
111 Ga0496116_0003884 3300048919 Bacteria 14563
112 Ga0496117_0000258 3300048920 Bacteria 99879
113 Ga0496117_0049268 3300048920 Bacteria 2998
114 Ga0496117_0054852 3300048920 Bacteria 2789
115 Ga0496118_0002671 3300048921 Bacteria 23576
116 Ga0496118_0005295 3300048921 Bacteria 14717
117 Ga0496118_0008937 3300048921 Bacteria 10227
118 Ga0496118_0022230 3300048921 Bacteria 5553
119 Ga0496119_0007769 3300048922 Bacteria 9561
120 Ga0496120_0000552 3300048923 Bacteria 57133
121 Ga0496122_0000070 3300048925 Bacteria 223198
122 Ga0496122_0034823 3300048925 Bacteria 4111
123 Ga0496122_0042522 3300048925 Bacteria 3573
124 Ga0496123_0000131 3300048926 Bacteria 153642
125 Ga0496123_0106705 3300048926 Bacteria 1613
126 Ga0496124_0000335 3300048927 Bacteria 86882
127 Ga0496124_0001544 3300048927 Bacteria 33361
128 Ga0496124_0004474 3300048927 Bacteria 16308
129 Ga0496124_0039729 3300048927 Bacteria 4075
130 Ga0496125_0000056 3300048928 Bacteria 271016
131 Ga0496125_0000082 3300048928 Bacteria 227300
132 Ga0496125_0002266 3300048928 Bacteria 25541
133 Ga0496125_0008160 3300048928 Bacteria 11025
134 Ga0496126_0000137 3300048929 Bacteria 167415
135 Ga0496126_0001202 3300048929 Bacteria 42234
136 Ga0496126_0002887 3300048929 Bacteria 22411
137 Ga0501238_000131 3300049671 Bacteria 11823
138 Ga0501249_000027 3300049679 Bacteria 87387
139 Ga0501083_0011248 3300049744 Bacteria 6278
140 Ga0501266_000008 3300049763 Bacteria 241629
141 Ga0501280_000553 3300049776 Bacteria 8736
142 Ga0500646_0004751 3300053090 Bacteria 3438
143 Ga0500641_0000032 3300053096 Bacteria 82232
144 Ga0500641_0000147 3300053096 Bacteria 25852
145 Ga0500658_0000043 3300053134 Bacteria 73664
146 2513235749 2513020052 Bacteria 5120511
147 2520881574 2519899754 Bacteria 5336938
148 2524005843 2523533629 Bacteria 2982326
149 2550900483 2548877040 Bacteria 7507281
150 2566035084 2565956521 Bacteria 4468993
151 2585826332 2585427591 Bacteria 5482980
152 2585830634 2585427592 Bacteria 5370892
153 2601641288 2600255286 Bacteria 5390125
154 2644008673 2643221600 Bacteria 5530138
155 2644372944 2643221667 Bacteria 5627472
156 2644643045 2643221716 Bacteria 4986332
157 2644683020 2643221725 Bacteria 5087956
158 2671106625 2667528173 Bacteria 5375747
159 2707101197 2706794495 Bacteria 4536932
160 2728534546 2728368933 Bacteria 7044283
161 2738736011 2738541279 Bacteria 6149495
162 2738766935 2738541285 Bacteria 6150075
163 2739217646 2738543007 Bacteria 6149845
164 2740001802 2739367857 Bacteria 5433684
165 2740006618 2739367858 Bacteria 5432813
166 2802654359 2802428842 Bacteria 4926114
167 2809127176 2808606414 Bacteria 4917181
168 2817416842 2816332280 Bacteria 5109718
169 2833641224 2833640130 Bacteria 4858325
170 2852106102 2852103415 Bacteria 5193810
171 2854605226 2854601825 Bacteria 4797592
172 2857616645 2857613821 Bacteria 4917088
173 2857620865 2857618242 Bacteria 5635925
174 2881360622 2881359912 Bacteria 4935907
175 2903899356 2903895155 Bacteria 5258610
176 2904421514 2904419702 Bacteria 5166287
177 2904474225 2904474040 Bacteria 5504324
178 2904559446 2904555929 Bacteria 5218588
179 2907204187 2907202186 Bacteria 6632024
180 2919150572 2919150387 Bacteria 5500879
181 2919195048 2919191525 Bacteria 5765973
182 2919513407 2919509842 Bacteria 4104664
183 2919686088 2919683626 Bacteria 5534354
184 2923527707 2923525760 Bacteria 4472324
185 2927145445 2927143783 Bacteria 5504251
186 2929154055 2929150217 Bacteria 5462483
187 2938649851 2938649242 Bacteria 7118381
188 2958463301 2958458903 Bacteria 5301041
189 2964376078 2964375228 Bacteria 4909004
190 2968562827 2968558590 Bacteria 6956864
191 2971408091 2971403814 Bacteria 7370929
192 2977270729 2977268062 Bacteria 5243061
193 2978978067 2978975091 Bacteria 4704313
194 2988226785 2988225383 Bacteria 7221625
195 2996635696 2996632988 Bacteria 6921523
196 8054311303 8054307821 Bacteria 5212224
197 8054469867 8054465665 Bacteria 7323556
198 8055422329 8055419101 Bacteria 5289643
199 8055594275 8055592153 Bacteria 5961247
200 8055694596 8055693939 Bacteria 4772047
201 8056441272 8056440228 Bacteria 4946504
202 Ga0501083_0001118
203 SwRhRL2b_contig_294876
204 JGI24739J22299_10000543
205 JGI25162J39368_1000031
206 JGI25163J39215_1000071
207 JGI25164J39214_1000001
208 JGI25151J46595_10003897
209 Ga0006562J51391_1013616
210 Ga0055538_1000004
211 Ga0055539_1000004
212 Ga0055533_1000007
213 Ga0055525_1000007
214 Ga0055541_1000004
215 Ga0058692_1000363
216 Ga0065714_10071302
217 Ga0065704_10000063
218 Ga0070682_100012309
219 Ga0070668_100009448
220 Ga0099824_1005584
221 Ga0079104_1000119
222 Ga0099826_10058833
223 Ga0105251_10001197
224 Ga0105251_10058018
225 Ga0105244_10000022
226 Ga0105244_10001164
227 Ga0105244_10002281
228 Ga0105244_10003229
229 Ga0105250_10001495
230 Ga0157373_10000008
231 Ga0157373_10035200
232 Ga0157371_10000159
233 Ga0157371_10001807
234 Ga0157371_10001855
235 Ga0157370_10000341
236 Ga0157370_10006277
237 Ga0157370_10020779
238 Ga0157369_10003319
239 Ga0157369_10008135
240 Ga0163162_10012328
241 Ga0157375_10149229
242 Ga0182006_1026520
243 Ga0182006_1033548
244 Ga0163161_10000056
245 Ga0209760_100006
246 Ga0209784_100001
247 Ga0209566_100001
248 Ga0209674_100002
249 Ga0209563_100008
250 Ga0207427_100002
251 Ga0209437_100114
252 Ga0209677_100004
253 Ga0209676_1000347
254 Ga0209025_1011529
255 Ga0207696_1000737
256 Ga0207655_1000052
257 Ga0207655_1000222
258 Ga0207713_1006798
259 Ga0209281_1000238
260 Ga0209371_1000321
261 Ga0209489_119148
262 Ga0265338_10000030
263 Ga0265338_10000062
264 Ga0265325_10018363
265 Ga0307408_100006383
266 Ga0307405_10058595
267 Ga0307413_10000614
268 Ga0307410_10000577
269 Ga0307406_10000075
270 Ga0307412_10018953
271 Ga0307416_100001293
272 Ga0307414_10000002
273 Ga0307414_10001619
274 Ga0307414_10020392
275 Ga0307411_10000006
276 Ga0400483_004213
277 Ga0400483_126751
278 Ga0400483_250454
279 Ga0400489_83784
280 Ga0439447_011517
281 Ga0439466_0000559
282 Ga0439452_000009
283 Ga0451577_0000090
284 Ga0451577_0004605
285 Ga0451577_0177461
286 Ga0453683_0000005
287 Ga0453683_0002252
288 Ga0453683_0034635
289 Ga0453683_0059733
290 Ga0453684_0000322
291 Ga0453684_0000469
292 Ga0453684_0002121
293 Ga0453684_0020034
294 Ga0453684_0041239
295 Ga0453684_0061353
296 Ga0453684_0120145
297 Ga0453684_0180612
298 Ga0453684_0196981
299 Ga0451576_0000614
300 Ga0451576_0001114
301 Ga0451576_0002031
302 Ga0451576_0037052
303 Ga0451576_0101465
304 Ga0451576_0193941
305 Ga0495650_0000004
306 Ga0495660_0000022
307 Ga0495660_0041344
308 Ga0496104_0001477
309 Ga0496116_0000004
310 Ga0496116_0000016
311 Ga0496116_0000203
312 Ga0496116_0003884
313 Ga0496117_0000258
314 Ga0496117_0049268
315 Ga0496117_0054852
316 Ga0496118_0002671
317 Ga0496118_0005295
318 Ga0496118_0008937
319 Ga0496118_0022230
320 Ga0496119_0007769
321 Ga0496120_0000552
322 Ga0496122_0000070
323 Ga0496122_0034823
324 Ga0496122_0042522
325 Ga0496123_0000131
326 Ga0496123_0106705
327 Ga0496124_0000335
328 Ga0496124_0001544
329 Ga0496124_0004474
330 Ga0496124_0039729
331 Ga0496125_0000056
332 Ga0496125_0000082
333 Ga0496125_0002266
334 Ga0496125_0008160
335 Ga0496126_0000137
336 Ga0496126_0001202
337 Ga0496126_0002887
338 Ga0501238_000131
339 Ga0501249_000027
340 Ga0501083_0011248
341 Ga0501266_000008
342 Ga0501280_000553
343 Ga0500646_0004751
344 Ga0500641_0000032
345 Ga0500641_0000147
346 Ga0500658_0000043
347 2513235749
348 2520881574
349 2524005843
350 2550900483
351 2566035084
352 2585826332
353 2585830634
354 2601641288
355 2644008673
356 2644372944
357 2644643045
358 2644683020
359 2671106625
360 2707101197
361 2728534546
362 2738736011
363 2738766935
364 2739217646
365 2740001802
366 2740006618
367 2802654359
368 2809127176
369 2817416842
370 2833641224
371 2852106102
372 2854605226
373 2857616645
374 2857620865
375 2881360622
376 2903899356
377 2904421514
378 2904474225
379 2904559446
380 2907204187
381 2919150572
382 2919195048
383 2919513407
384 2919686088
385 2923527707
386 2927145445
387 2929154055
388 2938649851
389 2958463301
390 2964376078
391 2968562827
392 2971408091
393 2977270729
394 2978978067
395 2988226785
396 2996635696
397 8054311303
398 8054469867
399 8055422329
400 8055594275
401 8055694596
402 8056441272

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01232

Mannitol_dh

Mannitol dehydrogenase Rossmann domain

89

335

0.86

PF08125

Mannitol_dh_C

Mannitol dehydrogenase C-terminal domain

345

552

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rk5-assembly2.cif.gz_A mannitol-2-dehydrogenase bound to nadh from aspergillus fumigatus 0.8645 11 482
7rk4-assembly1.cif.gz_A mannitol-2-dehydrogenase from aspergillus fumigatus 0.8478 11 482
5itg-assembly2.cif.gz_B crystal structure of d-sorbitol dehydrogenase in substrate-free form 0.8335 13 479
7rk4-assembly1.cif.gz_A mannitol-2-dehydrogenase from aspergillus fumigatus 0.8262 11 482
7rk5-assembly2.cif.gz_A mannitol-2-dehydrogenase bound to nadh from aspergillus fumigatus 0.822 11 482
ID Description Score Start End Superfamily
af_P0A6L7_272_481_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9996 272 479 1.10.1040.10
af_P0A6L7_2_268_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9874 2 267 3.40.50.720
af_P0A6L7_272_481_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9854 272 479 1.10.1040.10
af_P0A6L7_2_268_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.98 2 267 3.40.50.720
af_P39160_282_486_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9165 273 481 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A0A3YLD9-F1-model_v4 deleted 0.9974 283 454
AF-A0A484X6M8-F1-model_v4 Altronate oxidoreductase (EC 1.1.1.58) 0.9956 271 383 GO:0005829
GO:0008926
GO:0009026
GO:0019592
GO:0019698
AF-A0A3D4XA28-F1-model_v4 Tagaturonate reductase (EC 1.1.1.58) 0.9952 284 375 GO:0005829
GO:0008926
GO:0009026
GO:0019592
GO:0019698
AF-A0A6L7A0U9-F1-model_v4 Mannitol dehydrogenase C-terminal domain-containing protein 0.9939 290 483 GO:0005829
GO:0008926
GO:0009026
GO:0019592
GO:0019698
AF-A0A2N4YRY6-F1-model_v4 Altronate oxidoreductase (EC 1.1.1.58) 0.9914 356 481 GO:0005829
GO:0008926
GO:0009026
GO:0019592
GO:0019698

Map