F309188

General Info

Members Datasets Scaffolds Average Seq Length
201 158 160 370

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2868088558|2868094993
Length 424
Sequence VVVAARRTPIGTAGRALAGVTVDRLAAPVLEAVMDDLGGDVTARVSDAAGGQTDRHVRWTAVPGRIDDVVLGNCMGPGGNIARVSALAAGLGDAVPGVTIDRQCGSGLAAILQAGQAIRAGDAALVLAGGAESASTAPIRAFRPAFDGAQPVPYQRAPFTPPEFGDPDMGAAADALAAACGVSRNRQDDYAVASHAKALAAREAGRFDAELVPVGRLDHDERPRPLRESVLARMPAAFVPGGSVTAGNSCPVSDGAAVVGVIGEDARGGRPGLRLVSGAIVGCDPRLPGWGPVPAVERVLRSAGVKIRDVAVVEIVEAFAGQVLAVTDALGLDPLSVPGAPGDIMTPGVPGDTTTDVSHNGVTTVCPDGGALALGHPWGATGAVTVVRLFSRLVRGGAPAGTLGLATAAVGGGLGVAALFEVVR

Samples

Sample ID Description Type Environment
1 2643221566 Microbacterium sp. Root166 Isolate Unclassified
2 2643221613 Oerskovia sp. Root22 Isolate Unclassified
3 2643221616 Leifsonia sp. Root227 Isolate Unclassified
4 2643221721 Oerskovia sp. Root918 Isolate Unclassified
5 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
6 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
7 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
8 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
9 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
10 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
11 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
12 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
13 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
14 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
15 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
16 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
17 2808606394 Promicromonospora sp. C35 Isolate Unclassified
18 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
19 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
20 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
21 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
22 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
23 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
24 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
25 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
26 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
27 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
28 2891562705 Microbispora tritici MT50 Isolate Unclassified
29 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
30 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
31 2919395869 Microbacterium resistens 2980 Isolate Unclassified
32 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
33 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
34 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
35 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
36 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
37 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
38 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
39 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
40 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
41 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
42 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
43 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
44 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
45 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
46 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
47 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
48 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
49 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
50 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
51 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
52 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
53 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
54 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
55 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
56 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
57 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
58 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
59 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
60 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
61 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
80 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
127 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
128 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
156 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
157 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere
158 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.11
Metatranscriptomes 1.49
Isolates 20.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.94
Nodule 0
Rhizoplane 10.95
Rhizosphere 55.72
Stem 0
Stem Tuber 0.5
Unclassified 20.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000925 3300002772 Bacteria 9711
2 JGI25165J46597_1000269 3300003214 Bacteria 67008
3 Ga0055539_1000090 3300003752 Bacteria 112260
4 Ga0055533_1000001 3300003756 Bacteria 1863437
5 Ga0055525_1000126 3300003759 Bacteria 115430
6 Ga0055527_1000064 3300003760 Bacteria 88552
7 Ga0055542_1000023 3300003762 Bacteria 292964
8 Ga0055529_1000050 3300003763 Bacteria 206297
9 Ga0055541_1003846 3300003841 Bacteria 2781
10 Ga0070680_100173345 3300005336 Bacteria 1816
11 Ga0070682_100028088 3300005337 Bacteria 3382
12 Ga0070691_10132296 3300005341 Bacteria 1265
13 Ga0070668_100086917 3300005347 Bacteria 2459
14 Ga0070674_100084388 3300005356 Bacteria 2278
15 Ga0070688_100064363 3300005365 Bacteria 2327
16 Ga0070714_100039407 3300005435 Bacteria 3978
17 Ga0070701_10001584 3300005438 Bacteria 8468
18 Ga0068867_100069116 3300005459 Bacteria 2637
19 Ga0070686_100114344 3300005544 Bacteria 1844
20 Ga0068856_100060926 3300005614 Bacteria 3728
21 Ga0068852_100005597 3300005616 Bacteria 9007
22 Ga0068861_100020017 3300005719 Bacteria 4786
23 Ga0068862_100401709 3300005844 Bacteria 1282
24 Ga0105245_10008067 3300009098 Bacteria 9206
25 Ga0105243_10019450 3300009148 Bacteria 5149
26 Ga0105248_10070401 3300009177 Bacteria 3928
27 Ga0157369_10036082 3300013105 Bacteria 5419
28 Ga0157369_10049292 3300013105 Bacteria 4566
29 Ga0157369_10087471 3300013105 Bacteria 3327
30 Ga0163162_10193763 3300013306 Bacteria 2160
31 Ga0157372_10090481 3300013307 Bacteria 3479
32 Ga0157380_10039440 3300014326 Bacteria 3673
33 Ga0206354_10104284 3300020081 Bacteria 4818
34 Ga0206353_10536355 3300020082 Bacteria 8525
35 Ga0206353_11201059 3300020082 Bacteria 5503
36 Ga0209566_100066 3300025225 Bacteria 186951
37 Ga0209674_100001 3300025226 Bacteria 4013750
38 Ga0209672_100116 3300025228 Bacteria 87706
39 Ga0209147_100279 3300025229 Bacteria 44425
40 Ga0209563_100001 3300025230 Bacteria 4013775
41 Ga0209563_100957 3300025230 Bacteria 8486
42 Ga0207427_100054 3300025231 Bacteria 216315
43 Ga0209677_100001 3300025253 Bacteria 4013787
44 Ga0209677_102068 3300025253 Bacteria 7925
45 Ga0209148_1000240 3300025254 Bacteria 87706
46 Ga0209233_1000001 3300025261 Bacteria 2992747
47 Ga0209455_1000197 3300025272 Bacteria 87706
48 Ga0207643_10005970 3300025908 Bacteria 6509
49 Ga0207659_10175696 3300025926 Bacteria 1693
50 Ga0207664_10086661 3300025929 Bacteria 2559
51 Ga0207690_10206034 3300025932 Bacteria 1497
52 Ga0207691_10006454 3300025940 Bacteria 11330
53 Ga0207712_10321467 3300025961 Bacteria 1277
54 Ga0207677_10087027 3300026023 Bacteria 2260
55 Ga0207639_10049368 3300026041 Bacteria 3190
56 Ga0207708_10000683 3300026075 Bacteria 25782
57 Ga0207648_10001487 3300026089 Bacteria 25804
58 Ga0207675_100001951 3300026118 Bacteria 20596
59 Ga0207683_10117730 3300026121 Bacteria 2382
60 Ga0207698_10291603 3300026142 Bacteria 1514
61 Ga0268265_10333365 3300028380 Bacteria 1379
62 Ga0265340_10001557 3300031247 Bacteria 13168
63 Ga0307408_100048367 3300031548 Bacteria 3050
64 Ga0316576_10006479 3300031727 Bacteria 7295
65 Ga0307412_10117059 3300031911 Bacteria 1913
66 Ga0307415_100312126 3300032126 Bacteria 1307
67 Ga0395899_0165161 3300037312 Bacteria 1562
68 Ga0395900_0001665 3300037418 Bacteria 25980
69 Ga0395900_0040639 3300037418 Bacteria 4793
70 Ga0395900_0127859 3300037418 Bacteria 2605
71 Ga0395900_0359384 3300037418 Bacteria 1428
72 Ga0395898_0000060 3300037466 Bacteria 273835
73 Ga0395898_0027744 3300037466 Bacteria 5678
74 Ga0395898_0109790 3300037466 Bacteria 2644
75 Ga0395901_0351756 3300038443 Bacteria 1520
76 Ga0466961_0010856 3300044693 Bacteria 5816
77 Ga0466961_0048676 3300044693 Bacteria 2709
78 Ga0466970_0062724 3300044765 Bacteria 1992
79 Ga0466970_0235975 3300044765 Bacteria 1023
80 Ga0466957_0246852 3300044842 Bacteria 1186
81 Ga0466959_0033345 3300045049 Bacteria 3808
82 Ga0466959_0056531 3300045049 Bacteria 2863
83 Ga0466967_0076598 3300045976 Bacteria 3009
84 Ga0495664_0098340 3300046477 Bacteria 1762
85 Ga0496101_0117727 3300048904 Bacteria 2006
86 Ga0496102_0002753 3300048905 Bacteria 14994
87 Ga0496103_0061770 3300048906 Bacteria 2331
88 Ga0496104_0047237 3300048907 Bacteria 4057
89 Ga0496105_0065311 3300048908 Bacteria 3003
90 Ga0496106_0028733 3300048909 Bacteria 4142
91 Ga0496107_0017258 3300048910 Bacteria 5076
92 Ga0496108_0044719 3300048911 Bacteria 3696
93 Ga0496109_0022585 3300048912 Bacteria 5574
94 Ga0496109_0045361 3300048912 Bacteria 3988
95 Ga0496110_0005525 3300048913 Bacteria 9923
96 Ga0496110_0049668 3300048913 Bacteria 3681
97 Ga0496110_0053602 3300048913 Bacteria 3546
98 Ga0496112_0201081 3300048915 Bacteria 1951
99 Ga0496113_0073936 3300048916 Bacteria 2598
100 Ga0496114_0029653 3300048917 Bacteria 4498
101 Ga0496114_0038648 3300048917 Bacteria 3949
102 Ga0496114_0063528 3300048917 Bacteria 3091
103 Ga0496114_0085431 3300048917 Bacteria 2673
104 Ga0496115_0007167 3300048918 Bacteria 8187
105 Ga0496115_0093418 3300048918 Bacteria 2460
106 Ga0496115_0106521 3300048918 Bacteria 2301
107 Ga0496116_0045035 3300048919 Bacteria 2990
108 Ga0496117_0019877 3300048920 Bacteria 5496
109 Ga0496117_0024215 3300048920 Bacteria 4809
110 Ga0496117_0070607 3300048920 Bacteria 2344
111 Ga0496118_0062258 3300048921 Bacteria 2756
112 Ga0496118_0124123 3300048921 Bacteria 1676
113 Ga0496119_0014930 3300048922 Bacteria 6035
114 Ga0496119_0030382 3300048922 Bacteria 3644
115 Ga0496120_0000553 3300048923 Bacteria 56978
116 Ga0496122_0000055 3300048925 Bacteria 258485
117 Ga0496123_0000003 3300048926 Bacteria 866556
118 Ga0496124_0003582 3300048927 Bacteria 18877
119 Ga0496125_0000473 3300048928 Bacteria 71177
120 Ga0501033_0000615 3300049570 Bacteria 32993
121 Ga0501033_0011706 3300049570 Bacteria 6707
122 Ga0501033_0073935 3300049570 Bacteria 2502
123 Ga0501034_0003983 3300049571 Bacteria 16595
124 Ga0501034_0056420 3300049571 Bacteria 3952
125 Ga0501036_0000286 3300049572 Bacteria 34955
126 Ga0501036_0060411 3300049572 Bacteria 3211
127 Ga0501037_0000941 3300049573 Bacteria 21605
128 Ga0501037_0009499 3300049573 Bacteria 7137
129 Ga0501037_0042847 3300049573 Bacteria 3326
130 Ga0501038_0001366 3300049574 Bacteria 22257
131 Ga0501039_0025838 3300049575 Bacteria 4514
132 Ga0501039_0200684 3300049575 Bacteria 1568
133 Ga0501043_0017104 3300049579 Bacteria 5685
134 Ga0501046_0000193 3300049580 Bacteria 62517
135 Ga0501046_0000755 3300049580 Bacteria 31299
136 Ga0501046_0003891 3300049580 Bacteria 13653
137 Ga0501047_0000361 3300049581 Bacteria 51611
138 Ga0501048_0029134 3300049582 Bacteria 4005
139 Ga0501067_0009192 3300049583 Bacteria 5473
140 Ga0501067_0087405 3300049583 Bacteria 1730
141 Ga0501068_0123700 3300049584 Bacteria 1614
142 Ga0501069_0023550 3300049585 Bacteria 3359
143 Ga0501069_0035645 3300049585 Bacteria 2742
144 Ga0501069_0081641 3300049585 Bacteria 1821
145 Ga0501070_0001667 3300049586 Bacteria 19684
146 Ga0501070_0003977 3300049586 Bacteria 12725
147 Ga0501070_0018420 3300049586 Bacteria 5859
148 Ga0501070_0174005 3300049586 Bacteria 1773
149 Ga0501073_0021847 3300049589 Bacteria 4610
150 Ga0501035_0000628 3300049822 Bacteria 38847
151 Ga0501035_0072541 3300049822 Bacteria 3047
152 Ga0501044_0009858 3300049823 Bacteria 10383
153 Ga0501044_0229915 3300049823 Bacteria 1802
154 Ga0495601_0115826 3300053077 Bacteria 1738
155 Ga0500568_0000105 3300053139 Bacteria 78066
156 Ga0500616_0000021 3300053153 Bacteria 484527
157 Ga0500645_005699 3300053730 Bacteria 4540
158 Ga0501084_0270695 3300054114 Bacteria 1434
159 Ga0466962_0014556 3300061719 Bacteria 3791
160 Ga0466962_0054775 3300061719 Bacteria 1906

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_0085431 Ga0496114_0085431_29_961 285
2 3300044765 Ga0466970_0235975 Ga0466970_0235975_16_960 289
3 3300049584 Ga0501068_0123700 Ga0501068_0123700_609_1604 291
4 3300054114 Ga0501084_0270695 Ga0501084_0270695_405_1421 298
5 3300048918 Ga0496115_0093418 Ga0496115_0093418_1433_2416 307
6 3300037418 Ga0395900_0127859 Ga0395900_0127859_165_1289 313
7 3300005336 Ga0070680_100173345 Ga0070680_1001733452 316
8 3300031727 Ga0316576_10006479 Ga0316576_100064795 322
9 3300049575 Ga0501039_0200684 Ga0501039_0200684_276_1400 322
10 3300020082 Ga0206353_11201059 Ga0206353_112010592 327
11 3300048920 Ga0496117_0019877 Ga0496117_0019877_1835_3022 328
12 3300048921 Ga0496118_0062258 Ga0496118_0062258_250_1437 328
13 3300044693 Ga0466961_0048676 Ga0466961_0048676_100_1242 329
14 3300045049 Ga0466959_0056531 Ga0466959_0056531_670_1812 330
15 3300049580 Ga0501046_0003891 Ga0501046_0003891_4533_5696 330
16 3300049570 Ga0501033_0000615 Ga0501033_0000615_30429_31556 331
17 3300046477 Ga0495664_0098340 Ga0495664_0098340_457_1617 332
18 3300048920 Ga0496117_0024215 Ga0496117_0024215_2225_3397 332
19 3300053077 Ga0495601_0115826 Ga0495601_0115826_338_1498 332
20 3300013105 Ga0157369_10049292 Ga0157369_100492926 334
21 3300049570 Ga0501033_0011706 Ga0501033_0011706_3701_4831 334
22 3300049571 Ga0501034_0003983 Ga0501034_0003983_6373_7503 334
23 3300049572 Ga0501036_0000286 Ga0501036_0000286_10998_12128 334
24 3300049572 Ga0501036_0060411 Ga0501036_0060411_22_1161 334
25 3300049573 Ga0501037_0000941 Ga0501037_0000941_7520_8650 334
26 3300049573 Ga0501037_0009499 Ga0501037_0009499_5986_7125 334
27 3300049574 Ga0501038_0001366 Ga0501038_0001366_13144_14274 334
28 3300049575 Ga0501039_0025838 Ga0501039_0025838_615_1745 334
29 3300049579 Ga0501043_0017104 Ga0501043_0017104_100_1251 334
30 3300049580 Ga0501046_0000755 Ga0501046_0000755_27836_28966 334
31 3300049581 Ga0501047_0000361 Ga0501047_0000361_46102_47232 334
32 3300049582 Ga0501048_0029134 Ga0501048_0029134_878_2008 334
33 3300049583 Ga0501067_0087405 Ga0501067_0087405_58_1197 334
34 3300049586 Ga0501070_0018420 Ga0501070_0018420_4492_5643 334
35 3300049822 Ga0501035_0000628 Ga0501035_0000628_3046_4176 334
36 3300049823 Ga0501044_0009858 Ga0501044_0009858_8249_9379 334
37 3300037418 Ga0395900_0359384 Ga0395900_0359384_124_1236 335
38 3300049580 Ga0501046_0000193 Ga0501046_0000193_3409_4548 335
39 3300048918 Ga0496115_0106521 Ga0496115_0106521_248_1390 336
40 3300049586 Ga0501070_0174005 Ga0501070_0174005_219_1343 337
41 3300053730 Ga0500645_005699 Ga0500645_005699_2432_3535 337
42 iso_pu_bacteria 2675903059 2676480218 337
43 3300061719 Ga0466962_0014556 Ga0466962_0014556_1948_3090 339
44 3300009098 Ga0105245_10008067 Ga0105245_100080675 340
45 3300009148 Ga0105243_10019450 Ga0105243_100194503 340
46 3300049571 Ga0501034_0056420 Ga0501034_0056420_1430_2560 340
47 3300049573 Ga0501037_0042847 Ga0501037_0042847_636_1766 340
48 3300049589 Ga0501073_0021847 Ga0501073_0021847_2234_3364 340
49 3300049823 Ga0501044_0229915 Ga0501044_0229915_69_1199 340
50 3300037466 Ga0395898_0027744 Ga0395898_0027744_3688_4812 341
51 3300049585 Ga0501069_0023550 Ga0501069_0023550_1067_2176 341
52 3300053153 Ga0500616_0000021 Ga0500616_0000021_205437_206561 341
53 3300005341 Ga0070691_10132296 Ga0070691_101322961 342
54 3300005347 Ga0070668_100086917 Ga0070668_1000869172 342
55 3300005356 Ga0070674_100084388 Ga0070674_1000843883 342
56 3300005365 Ga0070688_100064363 Ga0070688_1000643631 342
57 3300005438 Ga0070701_10001584 Ga0070701_100015847 342
58 3300005459 Ga0068867_100069116 Ga0068867_1000691164 342
59 3300005544 Ga0070686_100114344 Ga0070686_1001143441 342
60 3300005616 Ga0068852_100005597 Ga0068852_1000055977 342
61 3300005719 Ga0068861_100020017 Ga0068861_1000200171 342
62 3300005844 Ga0068862_100401709 Ga0068862_1004017091 342
63 3300009177 Ga0105248_10070401 Ga0105248_100704013 342
64 3300014326 Ga0157380_10039440 Ga0157380_100394403 342
65 3300025908 Ga0207643_10005970 Ga0207643_100059702 342
66 3300025926 Ga0207659_10175696 Ga0207659_101756962 342
67 3300025940 Ga0207691_10006454 Ga0207691_100064547 342
68 3300025961 Ga0207712_10321467 Ga0207712_103214672 342
69 3300026041 Ga0207639_10049368 Ga0207639_100493684 342
70 3300026075 Ga0207708_10000683 Ga0207708_1000068316 342
71 3300026089 Ga0207648_10001487 Ga0207648_1000148719 342
72 3300026118 Ga0207675_100001951 Ga0207675_10000195116 342
73 3300028380 Ga0268265_10333365 Ga0268265_103333652 342
74 3300044693 Ga0466961_0010856 Ga0466961_0010856_846_1970 342
75 3300048912 Ga0496109_0022585 Ga0496109_0022585_459_1568 342
76 3300048913 Ga0496110_0049668 Ga0496110_0049668_587_1696 342
77 3300061719 Ga0466962_0054775 Ga0466962_0054775_284_1408 342
78 3300013105 Ga0157369_10036082 Ga0157369_100360824 343
79 3300013306 Ga0163162_10193763 Ga0163162_101937632 343
80 3300044765 Ga0466970_0062724 Ga0466970_0062724_731_1852 343
81 3300044842 Ga0466957_0246852 Ga0466957_0246852_40_1161 343
82 3300045049 Ga0466959_0033345 Ga0466959_0033345_589_1710 343
83 3300045976 Ga0466967_0076598 Ga0466967_0076598_101_1228 343
84 3300048907 Ga0496104_0047237 Ga0496104_0047237_479_1600 343
85 3300048908 Ga0496105_0065311 Ga0496105_0065311_161_1282 343
86 3300048910 Ga0496107_0017258 Ga0496107_0017258_1478_2599 343
87 3300048912 Ga0496109_0045361 Ga0496109_0045361_495_1616 343
88 3300048913 Ga0496110_0005525 Ga0496110_0005525_5140_6261 343
89 3300048917 Ga0496114_0029653 Ga0496114_0029653_2203_3324 343
90 3300048918 Ga0496115_0007167 Ga0496115_0007167_3354_4475 343
91 3300048922 Ga0496119_0030382 Ga0496119_0030382_1575_2696 343
92 3300049583 Ga0501067_0009192 Ga0501067_0009192_1929_3035 343
93 3300049585 Ga0501069_0035645 Ga0501069_0035645_1413_2519 343
94 3300049822 Ga0501035_0072541 Ga0501035_0072541_1511_2641 343
95 3300053139 Ga0500568_0000105 Ga0500568_0000105_72111_73214 343
96 iso_pu_bacteria 2895427314 2895429911 344
97 iso_pu_bacteria 8055066027 8055070290 346
98 3300025230 Ga0209563_100957 Ga0209563_1009576 347
99 3300049585 Ga0501069_0081641 Ga0501069_0081641_629_1759 347
100 3300005337 Ga0070682_100028088 Ga0070682_1000280882 348
101 3300013105 Ga0157369_10087471 Ga0157369_100874712 348
102 3300026023 Ga0207677_10087027 Ga0207677_100870272 348
103 3300026142 Ga0207698_10291603 Ga0207698_102916031 348
104 3300048904 Ga0496101_0117727 Ga0496101_0117727_241_1386 348
105 3300048905 Ga0496102_0002753 Ga0496102_0002753_317_1462 348
106 3300048906 Ga0496103_0061770 Ga0496103_0061770_849_1994 348
107 3300048909 Ga0496106_0028733 Ga0496106_0028733_2707_3852 348
108 3300048911 Ga0496108_0044719 Ga0496108_0044719_283_1428 348
109 3300048913 Ga0496110_0053602 Ga0496110_0053602_558_1703 348
110 3300003752 Ga0055539_1000090 Ga0055539_100009040 349
111 3300003756 Ga0055533_1000001 Ga0055533_10000011758 349
112 3300003759 Ga0055525_1000126 Ga0055525_100012641 349
113 3300003841 Ga0055541_1003846 Ga0055541_10038462 349
114 3300005435 Ga0070714_100039407 Ga0070714_1000394073 349
115 3300013307 Ga0157372_10090481 Ga0157372_100904813 349
116 3300025225 Ga0209566_100066 Ga0209566_10006669 349
117 3300025226 Ga0209674_100001 Ga0209674_1000011761 349
118 3300025230 Ga0209563_100001 Ga0209563_1000011761 349
119 3300025253 Ga0209677_100001 Ga0209677_1000011761 349
120 3300025929 Ga0207664_10086661 Ga0207664_100866612 349
121 3300025932 Ga0207690_10206034 Ga0207690_102060342 349
122 3300048919 Ga0496116_0045035 Ga0496116_0045035_346_1470 349
123 3300048920 Ga0496117_0070607 Ga0496117_0070607_510_1634 349
124 3300048922 Ga0496119_0014930 Ga0496119_0014930_4151_5275 349
125 3300048923 Ga0496120_0000553 Ga0496120_0000553_1230_2354 349
126 3300048925 Ga0496122_0000055 Ga0496122_0000055_217577_218701 349
127 3300048926 Ga0496123_0000003 Ga0496123_0000003_834402_835526 349
128 3300048927 Ga0496124_0003582 Ga0496124_0003582_13904_15028 349
129 3300048928 Ga0496125_0000473 Ga0496125_0000473_43191_44315 349
130 iso_pu_bacteria 2891395885 2891402919 349
131 iso_pu_bacteria 2891554331 2891554752 349
132 3300032126 Ga0307415_100312126 Ga0307415_1003121261 351
133 iso_pu_bacteria 2643221566 2643849482 351
134 iso_pu_bacteria 2837268691 2837269534 351
135 iso_pu_bacteria 2891562705 2891564805 351
136 iso_pu_bacteria 8057345674 8057346766 351
137 3300026121 Ga0207683_10117730 Ga0207683_101177302 352
138 iso_pu_bacteria 2690315906 2691513842 352
139 3300005614 Ga0068856_100060926 Ga0068856_1000609264 353
140 3300020081 Ga0206354_10104284 Ga0206354_101042843 353
141 3300020082 Ga0206353_10536355 Ga0206353_105363558 353
142 3300025253 Ga0209677_102068 Ga0209677_1020686 353
143 iso_pu_bacteria 2808606370 2808891162 353
144 iso_pu_bacteria 2675903060 2676492544 354
145 iso_pu_bacteria 2738541272 2738698141 354
146 iso_pu_bacteria 2738543027 2739327916 354
147 iso_pu_bacteria 2739367654 2739609852 354
148 iso_pu_bacteria 2808606394 2809027649 354
149 iso_pu_bacteria 2884693830 2884698949 354
150 iso_pu_bacteria 2895442618 2895449203 354
151 iso_pu_bacteria 2919395869 2919398987 354
152 iso_pu_bacteria 8056579771 8056582000 354
153 3300003760 Ga0055527_1000064 Ga0055527_100006460 355
154 3300003762 Ga0055542_1000023 Ga0055542_100002333 355
155 3300003763 Ga0055529_1000050 Ga0055529_100005033 355
156 3300025228 Ga0209672_100116 Ga0209672_10011634 355
157 3300025229 Ga0209147_100279 Ga0209147_10027913 355
158 3300025254 Ga0209148_1000240 Ga0209148_100024034 355
159 3300025272 Ga0209455_1000197 Ga0209455_100019734 355
160 3300031247 Ga0265340_10001557 Ga0265340_100015572 355
161 3300031548 Ga0307408_100048367 Ga0307408_1000483673 355
162 3300031911 Ga0307412_10117059 Ga0307412_101170592 355
163 3300037312 Ga0395899_0165161 Ga0395899_0165161_63_1250 355
164 3300037418 Ga0395900_0001665 Ga0395900_0001665_20488_21609 355
165 3300037418 Ga0395900_0040639 Ga0395900_0040639_3434_4621 355
166 3300037466 Ga0395898_0000060 Ga0395898_0000060_40489_41610 355
167 3300037466 Ga0395898_0109790 Ga0395898_0109790_1410_2597 355
168 3300038443 Ga0395901_0351756 Ga0395901_0351756_176_1363 355
169 3300048915 Ga0496112_0201081 Ga0496112_0201081_661_1845 355
170 3300048916 Ga0496113_0073936 Ga0496113_0073936_497_1681 355
171 3300048917 Ga0496114_0063528 Ga0496114_0063528_462_1586 355
172 3300048921 Ga0496118_0124123 Ga0496118_0124123_41_1165 355
173 3300049586 Ga0501070_0001667 Ga0501070_0001667_10324_11454 355
174 3300049586 Ga0501070_0003977 Ga0501070_0003977_5991_7127 355
175 iso_pu_bacteria 2643221613 2644081940 355
176 iso_pu_bacteria 2643221721 2644665017 355
177 iso_pu_bacteria 2775506735 2775658008 355
178 iso_pu_bacteria 2808606357 2808831112 355
179 iso_pu_bacteria 2808606360 2808852374 355
180 iso_pu_bacteria 2808606371 2808896420 355
181 iso_pu_bacteria 2811994871 2812321196 355
182 iso_pu_bacteria 2867312974 2867318533 355
183 iso_pu_bacteria 2867319477 2867320517 355
184 iso_pu_bacteria 2935890801 2935894760 355
185 iso_pu_bacteria 2945916053 2945918949 355
186 iso_pu_bacteria 2945920336 2945920649 355
187 iso_pu_bacteria 2946059875 2946062806 355
188 iso_pu_bacteria 2974302888 2974306944 355
189 iso_pu_bacteria 2758568621 2760623039 356
190 iso_pu_bacteria 2868088558 2868094993 356
191 iso_pu_bacteria 2928121344 2928122199 356
192 iso_pu_bacteria 2932431166 2932434198 357
193 3300048917 Ga0496114_0038648 Ga0496114_0038648_148_1329 358
194 3300049570 Ga0501033_0073935 Ga0501033_0073935_983_2110 358
195 iso_pu_bacteria 2857729791 2857731248 360
196 iso_pu_bacteria 2884763398 2884766479 363
197 iso_pu_bacteria 2643221616 2644096320 364
198 3300002772 JGI25164J39214_1000925 JGI25164J39214_10009255 370
199 3300003214 JGI25165J46597_1000269 JGI25165J46597_100026913 370
200 3300025231 Ga0207427_100054 Ga0207427_100054152 370
201 3300025261 Ga0209233_1000001 Ga0209233_10000011029 370

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02803

Thiolase_C

Thiolase, C-terminal domain

270

422

0.95

PF00108

Thiolase_N

Thiolase, N-terminal domain

56

265

0.94

PF00109

ketoacyl-synt

Beta-ketoacyl synthase, N-terminal domain

75

151

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zrc-assembly1.cif.gz_B crystal structure of msm-13, a putative t1-like thiolase from mycobacterium smegmatis 0.8817 3 370
1ulq-assembly2.cif.gz_F crystal structure of tt0182 from thermus thermophilus hb8 0.8814 4 367
5bz4-assembly3.cif.gz_J crystal structure of a t1-like thiolase (coa-complex) from mycobacterium smegmatis 0.8809 4 370
4zrc-assembly1.cif.gz_C crystal structure of msm-13, a putative t1-like thiolase from mycobacterium smegmatis 0.8799 4 370
5byv-assembly2.cif.gz_G crystal structure of msm-13, a putative t1-like thiolase from mycobacterium smegmatis 0.8777 4 369
ID Description Score Start End Superfamily
5lp7C01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8711 4 245 3.40.47.10
af_P0C7L2_1_401_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8684 3 369 3.40.47.10
af_P76461_265_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8602 253 369 3.40.47.10
af_P0C7L2_1_401_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8594 3 369 3.40.47.10
6bjaA01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8553 4 247 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A291GSC1-F1-model_v4 Probable acetyl-CoA acetyltransferase 0.9324 4 370 GO:0016747
AF-A0A4R4WG62-F1-model_v4 Thiolase family protein 0.9225 54 369 GO:0003988
GO:0006635
GO:0010124
AF-A0A291GSC1-F1-model_v4 Probable acetyl-CoA acetyltransferase 0.9225 4 370 GO:0016747
AF-A0A7Z0ECV8-F1-model_v4 Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) 0.9178 3 370 GO:0003985
AF-A0A7C8FTY8-F1-model_v4 Acetyl-CoA C-acyltransferase (EC 2.3.1.9) 0.9151 2 370 GO:0003985

Feature Viewer

pLDDT pTM Quality
87.93 0.92 High
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Predicted Structure (AlphaFold2)

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