F309288
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 202 | 149 | 404 | 611 |
Family's Representative Sequence
| Representative Sequence | 3300003320|rootH2_10033089|rootH2_100330891 |
| Length | 637 |
| Sequence | MDRALSTRLKVGLLLLAITAVVGGFGLQLAGQTDAARLVWMGGVLPVLAALIVEIGRSLLEGEVGLDIVAALSMSAALLLGESLAAAIVAVMYSGGTFLETFAEGRARREMHHLLSRVPRSAARHRDGGLEDVPLDDVVPGDRLLIRQGDVVPVDGTVASASAFLDTSPLTGESLPVRLARGGEAMSGSTNAGEAFDLIATRPAGDSTYAGIVRLVEAAQRSKAPMARLADRWSLGFLAVTVALALAAWWLSGDPIRAVAVLVVATPCPLILAVPVALVAGLSRAAHFGVLIKGAKALEGMGRIRTLILDKTGTLTDGRPRIVSIDTHGEVAERDLLRFAAALDQASKHPVAQAIVEAARGQGLLLPTPADVVEIPGEGVLGSIDDHQVIVGGDEFVARRVGRRSGDHPALGAGSVLVAVAVDGHIAGYLIMADPLRAEARQMLAGLRREGIGRILLATGDRAEVADRVTEGLGLDGVRAALAPDQKVLLVLTERKNGPVMMVGDGVNDAPALAAADVGVAMGVRGAAASAEAADVVLLVDRIDRLAAGIEVARKSRQIALQSVAAGIGLSLAGMIAAALGFLSPVQGAFLQEAIDVAVILNALRALRITPLPMPSPRAPTGDIAGRERDDESLVAS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 2 | 3300002704 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB | Metagenome | Unclassified |
| 3 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 4 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 5 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 6 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 7 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 9 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 17 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 19 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 21 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 22 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 24 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300025206 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) | Metagenome | Unclassified |
| 31 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 32 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 33 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 34 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 35 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 37 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 38 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 39 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 40 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 49 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 50 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 51 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 52 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 53 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 54 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 55 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 56 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 57 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 79 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 80 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 81 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 82 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 83 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 84 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 85 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 86 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 87 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 88 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 89 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 90 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 91 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 92 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 93 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 94 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 95 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 96 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 97 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 98 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 99 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 100 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 101 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 102 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 103 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 108 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 119 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 127 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 128 | 2508501050 | Microvirga lupini Lut6 | Isolate | Nodule |
| 129 | 2643221550 | Mesorhizobium sp. Root552 | Isolate | Unclassified |
| 130 | 2643221595 | Mesorhizobium sp. Root695 | Isolate | Unclassified |
| 131 | 2643221623 | Aminobacter sp. DSM 101952 Root100 | Isolate | Unclassified |
| 132 | 2643221627 | Mesorhizobium sp. Root102 | Isolate | Unclassified |
| 133 | 2643221637 | Rhizobium sp. Root1212 | Isolate | Unclassified |
| 134 | 2643221688 | Rhizobium sp. Root482 | Isolate | Unclassified |
| 135 | 2643221718 | Rhizobium sp. Root268 | Isolate | Unclassified |
| 136 | 2738541293 | Rhizobium sp. GV031 | Isolate | Unclassified |
| 137 | 2775507266 | Rhizobium tropici PRF 81 | Isolate | Nodule |
| 138 | 2854916844 | Neorhizobium huautlense DSM 21817 | Isolate | Unclassified |
| 139 | 2855020534 | Paracoccus endophyticus SYSUP0003 | Isolate | Stem Tuber |
| 140 | 2882456835 | Microvirga sp. KLBC 81 | Isolate | Unclassified |
| 141 | 2889914905 | Chelativorans alearense UJN715 | Isolate | Rhizosphere |
| 142 | 2898795034 | Rhodobacter sp. SGA-6-6 | Isolate | Rhizosphere |
| 143 | 2929138655 | Agrobacterium sp. R-72433 Hybrid assembly | Isolate | Unclassified |
| 144 | 2989349275 | Shinella kummerowiae CCBAU 25048 | Isolate | Unclassified |
| 145 | 2995392953 | Martelella limonii NBRC 109441 | Isolate | Unclassified |
| 146 | 3005416602 | Rhizobium sp. P40RR-XXII | Isolate | Rhizosphere |
| 147 | 8005314921 | Rhizobium sp. P28RR-XV | Isolate | Rhizosphere |
| 148 | 8005658619 | Rhizobium terrae CC-HIH110 | Isolate | Unclassified |
| 149 | 8018150411 | Rhizobium straminoryzae SM12 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 88.61 |
| Metatranscriptomes | 0 |
| Isolates | 11.39 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 7.43 |
| Nodule | 1.49 |
| Rhizoplane | 9.41 |
| Rhizosphere | 63.37 |
| Stem | 0 |
| Stem Tuber | 0.5 |
| Unclassified | 0.99 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10033089 | 3300003320 | Bacteria | 10833 |
| 2 | JGI25155J39150_1000026 | 3300002704 | Bacteria | 127779 |
| 3 | JGI25156J39149_1000028 | 3300002705 | Bacteria | 127325 |
| 4 | JGI25154J39366_1000046 | 3300002738 | Bacteria | 127252 |
| 5 | JGI25157J39369_1000358 | 3300002741 | Bacteria | 31869 |
| 6 | JGI25165J46597_1000351 | 3300003214 | Bacteria | 52020 |
| 7 | Ga0055524_1002437 | 3300003775 | Bacteria | 9596 |
| 8 | Ga0055524_1005015 | 3300003775 | Bacteria | 5996 |
| 9 | Ga0055528_1000670 | 3300003790 | Bacteria | 24820 |
| 10 | Ga0055528_1016432 | 3300003790 | Bacteria | 2617 |
| 11 | Ga0070670_100002696 | 3300005331 | Bacteria | 14664 |
| 12 | Ga0070660_100038030 | 3300005339 | Bacteria | 3651 |
| 13 | Ga0070660_100045916 | 3300005339 | Bacteria | 3346 |
| 14 | Ga0070660_100093785 | 3300005339 | Bacteria | 2371 |
| 15 | Ga0070661_100042616 | 3300005344 | Bacteria | 3313 |
| 16 | Ga0070671_100044660 | 3300005355 | Bacteria | 3682 |
| 17 | Ga0070709_10033412 | 3300005434 | Bacteria | 3110 |
| 18 | Ga0070711_100037173 | 3300005439 | Unclassified | 3265 |
| 19 | Ga0070681_10039320 | 3300005458 | Bacteria | 4742 |
| 20 | Ga0070684_100079315 | 3300005535 | Bacteria | 2902 |
| 21 | Ga0070686_100062768 | 3300005544 | Bacteria | 2405 |
| 22 | Ga0068855_100227886 | 3300005563 | Bacteria | 2088 |
| 23 | Ga0070664_100144087 | 3300005564 | Bacteria | 2100 |
| 24 | Ga0068856_100045068 | 3300005614 | Bacteria | 4341 |
| 25 | Ga0075364_10071934 | 3300006051 | Bacteria | 2278 |
| 26 | Ga0070712_100031357 | 3300006175 | Bacteria | 3581 |
| 27 | Ga0070712_100037315 | 3300006175 | Bacteria | 3311 |
| 28 | Ga0075434_100014987 | 3300006871 | Bacteria | 7420 |
| 29 | Ga0075434_100138306 | 3300006871 | Bacteria | 2455 |
| 30 | Ga0111539_10039071 | 3300009094 | Bacteria | 5722 |
| 31 | Ga0114129_10018987 | 3300009147 | Bacteria | 9794 |
| 32 | Ga0105248_10046308 | 3300009177 | Bacteria | 4874 |
| 33 | Ga0105238_10012030 | 3300009551 | Bacteria | 8717 |
| 34 | Ga0157372_10160864 | 3300013307 | Bacteria | 2595 |
| 35 | Ga0163163_10002541 | 3300014325 | Bacteria | 15450 |
| 36 | Ga0209435_100017 | 3300025206 | Bacteria | 303699 |
| 37 | Ga0209646_1000048 | 3300025246 | Bacteria | 303808 |
| 38 | Ga0209026_1000035 | 3300025250 | Bacteria | 303808 |
| 39 | Ga0209759_1000027 | 3300025256 | Bacteria | 303808 |
| 40 | Ga0209129_1003188 | 3300025258 | Bacteria | 7338 |
| 41 | Ga0209233_1000310 | 3300025261 | Bacteria | 56582 |
| 42 | Ga0209673_1001324 | 3300025273 | Bacteria | 24872 |
| 43 | Ga0209564_1004905 | 3300025295 | Bacteria | 7929 |
| 44 | Ga0209256_1001448 | 3300025299 | Bacteria | 24507 |
| 45 | Ga0207426_1003982 | 3300025302 | Bacteria | 7524 |
| 46 | Ga0207707_10033945 | 3300025912 | Bacteria | 4465 |
| 47 | Ga0207693_10002773 | 3300025915 | Bacteria | 15164 |
| 48 | Ga0207693_10088490 | 3300025915 | Bacteria | 2427 |
| 49 | Ga0207660_10051801 | 3300025917 | Bacteria | 2920 |
| 50 | Ga0207657_10006275 | 3300025919 | Bacteria | 12355 |
| 51 | Ga0207650_10001919 | 3300025925 | Bacteria | 14650 |
| 52 | Ga0207678_10016750 | 3300026067 | Bacteria | 6437 |
| 53 | Ga0207702_10035211 | 3300026078 | Bacteria | 4186 |
| 54 | Ga0207674_10028380 | 3300026116 | Bacteria | 5908 |
| 55 | Ga0265313_10016037 | 3300031595 | Bacteria | 4330 |
| 56 | Ga0265314_10009002 | 3300031711 | Bacteria | 8491 |
| 57 | Ga0265342_10006170 | 3300031712 | Bacteria | 8965 |
| 58 | Ga0307414_10003119 | 3300032004 | Bacteria | 8794 |
| 59 | Ga0307414_10027597 | 3300032004 | Bacteria | 3671 |
| 60 | Ga0307414_10042653 | 3300032004 | Bacteria | 3084 |
| 61 | Ga0373956_0008961 | 3300035119 | Bacteria | 4057 |
| 62 | Ga0373943_0020345 | 3300035170 | Bacteria | 3058 |
| 63 | Ga0373955_0004446 | 3300035172 | Bacteria | 6211 |
| 64 | Ga0373937_0021984 | 3300036401 | Bacteria | 5728 |
| 65 | Ga0373925_0001699 | 3300037068 | Bacteria | 18532 |
| 66 | Ga0495592_0001591 | 3300046454 | Bacteria | 15870 |
| 67 | Ga0495629_0000401 | 3300046459 | Bacteria | 36430 |
| 68 | Ga0495651_0012711 | 3300046462 | Bacteria | 6498 |
| 69 | Ga0495651_0063807 | 3300046462 | Bacteria | 2815 |
| 70 | Ga0495580_0103786 | 3300046472 | Bacteria | 1976 |
| 71 | Ga0495582_0009558 | 3300046473 | Bacteria | 5339 |
| 72 | Ga0495618_0054910 | 3300046514 | Bacteria | 2522 |
| 73 | Ga0495628_0011851 | 3300046516 | Bacteria | 7356 |
| 74 | Ga0495630_0099001 | 3300046517 | Bacteria | 2206 |
| 75 | Ga0495652_0004782 | 3300046529 | Bacteria | 12891 |
| 76 | Ga0495652_0072318 | 3300046529 | Bacteria | 2875 |
| 77 | Ga0495587_0059371 | 3300046536 | Bacteria | 2245 |
| 78 | Ga0495645_0003261 | 3300046543 | Bacteria | 11017 |
| 79 | Ga0495667_0013647 | 3300046559 | Bacteria | 5492 |
| 80 | Ga0495635_0004726 | 3300046663 | Bacteria | 9464 |
| 81 | Ga0495599_0025572 | 3300046678 | Bacteria | 3696 |
| 82 | Ga0495623_0001096 | 3300046679 | Bacteria | 18293 |
| 83 | Ga0495658_0000265 | 3300046683 | Bacteria | 29770 |
| 84 | Ga0495604_0005266 | 3300047317 | Bacteria | 10255 |
| 85 | Ga0495674_0069035 | 3300047319 | Bacteria | 3057 |
| 86 | Ga0495680_0003858 | 3300047322 | Bacteria | 14528 |
| 87 | Ga0495680_0028036 | 3300047322 | Bacteria | 4620 |
| 88 | Ga0495675_0019953 | 3300047444 | Bacteria | 4259 |
| 89 | Ga0495602_0000568 | 3300048088 | Bacteria | 34391 |
| 90 | Ga0496103_0013271 | 3300048906 | Bacteria | 4883 |
| 91 | Ga0496104_0001823 | 3300048907 | Bacteria | 18464 |
| 92 | Ga0496104_0001953 | 3300048907 | Bacteria | 17854 |
| 93 | Ga0496105_0007079 | 3300048908 | Bacteria | 8645 |
| 94 | Ga0496105_0009517 | 3300048908 | Bacteria | 7602 |
| 95 | Ga0496106_0015621 | 3300048909 | Bacteria | 5615 |
| 96 | Ga0496106_0038089 | 3300048909 | Bacteria | 3598 |
| 97 | Ga0496107_0037203 | 3300048910 | Bacteria | 3492 |
| 98 | Ga0496108_0000500 | 3300048911 | Bacteria | 31075 |
| 99 | Ga0496108_0018656 | 3300048911 | Bacteria | 5683 |
| 100 | Ga0496109_0000423 | 3300048912 | Bacteria | 37167 |
| 101 | Ga0496110_0007873 | 3300048913 | Bacteria | 8534 |
| 102 | Ga0496111_0018645 | 3300048914 | Bacteria | 4809 |
| 103 | Ga0496111_0045250 | 3300048914 | Bacteria | 3166 |
| 104 | Ga0496112_0028207 | 3300048915 | Bacteria | 5416 |
| 105 | Ga0496113_0000936 | 3300048916 | Bacteria | 15498 |
| 106 | Ga0496113_0086467 | 3300048916 | Bacteria | 2409 |
| 107 | Ga0496114_0037119 | 3300048917 | Bacteria | 4030 |
| 108 | Ga0496115_0066217 | 3300048918 | Bacteria | 2919 |
| 109 | Ga0496118_0067335 | 3300048921 | Unclassified | 2608 |
| 110 | Ga0496119_0051908 | 3300048922 | Bacteria | 2515 |
| 111 | Ga0496121_0000174 | 3300048924 | Bacteria | 143186 |
| 112 | Ga0496122_0000505 | 3300048925 | Bacteria | 80571 |
| 113 | Ga0496122_0001031 | 3300048925 | Bacteria | 48975 |
| 114 | Ga0496122_0043506 | 3300048925 | Bacteria | 3517 |
| 115 | Ga0496123_0000400 | 3300048926 | Bacteria | 80571 |
| 116 | Ga0496123_0005552 | 3300048926 | Bacteria | 12641 |
| 117 | Ga0496124_0001746 | 3300048927 | Bacteria | 30425 |
| 118 | Ga0496124_0070813 | 3300048927 | Bacteria | 2891 |
| 119 | Ga0496125_0013451 | 3300048928 | Bacteria | 8040 |
| 120 | Ga0496126_0001498 | 3300048929 | Bacteria | 36195 |
| 121 | Ga0496126_0059529 | 3300048929 | Bacteria | 3439 |
| 122 | Ga0501031_0000010 | 3300049568 | Bacteria | 146435 |
| 123 | Ga0501031_0018373 | 3300049568 | Bacteria | 4551 |
| 124 | Ga0501031_0028726 | 3300049568 | Bacteria | 3625 |
| 125 | Ga0501032_0000023 | 3300049569 | Bacteria | 146435 |
| 126 | Ga0501032_0004356 | 3300049569 | Bacteria | 10691 |
| 127 | Ga0501033_0000104 | 3300049570 | Bacteria | 81029 |
| 128 | Ga0501033_0000481 | 3300049570 | Bacteria | 37583 |
| 129 | Ga0501033_0000742 | 3300049570 | Bacteria | 29975 |
| 130 | Ga0501033_0003148 | 3300049570 | Bacteria | 13709 |
| 131 | Ga0501033_0009997 | 3300049570 | Bacteria | 7285 |
| 132 | Ga0501034_0000116 | 3300049571 | Bacteria | 146442 |
| 133 | Ga0501034_0001737 | 3300049571 | Bacteria | 27988 |
| 134 | Ga0501034_0006932 | 3300049571 | Bacteria | 12110 |
| 135 | Ga0501034_0051295 | 3300049571 | Bacteria | 4160 |
| 136 | Ga0501036_0000015 | 3300049572 | Bacteria | 146442 |
| 137 | Ga0501036_0012176 | 3300049572 | Bacteria | 7125 |
| 138 | Ga0501037_0000023 | 3300049573 | Bacteria | 146542 |
| 139 | Ga0501037_0010782 | 3300049573 | Bacteria | 6716 |
| 140 | Ga0501037_0012235 | 3300049573 | Bacteria | 6316 |
| 141 | Ga0501038_0000025 | 3300049574 | Bacteria | 146542 |
| 142 | Ga0501038_0015293 | 3300049574 | Bacteria | 6976 |
| 143 | Ga0501038_0016965 | 3300049574 | Bacteria | 6588 |
| 144 | Ga0501040_0042577 | 3300049576 | Bacteria | 3093 |
| 145 | Ga0501042_0056760 | 3300049578 | Bacteria | 2794 |
| 146 | Ga0501043_0000070 | 3300049579 | Bacteria | 89839 |
| 147 | Ga0501043_0158370 | 3300049579 | Bacteria | 1770 |
| 148 | Ga0501047_0001811 | 3300049581 | Bacteria | 20645 |
| 149 | Ga0501047_0005596 | 3300049581 | Bacteria | 11833 |
| 150 | Ga0501067_0041538 | 3300049583 | Bacteria | 2554 |
| 151 | Ga0501067_0061261 | 3300049583 | Bacteria | 2083 |
| 152 | Ga0501069_0014665 | 3300049585 | Bacteria | 4192 |
| 153 | Ga0501069_0033256 | 3300049585 | Bacteria | 2840 |
| 154 | Ga0501070_0001438 | 3300049586 | Bacteria | 21315 |
| 155 | Ga0501070_0057207 | 3300049586 | Bacteria | 3232 |
| 156 | Ga0501073_0023442 | 3300049589 | Bacteria | 4432 |
| 157 | Ga0501080_0039746 | 3300049742 | Bacteria | 4390 |
| 158 | Ga0501080_0080174 | 3300049742 | Bacteria | 3034 |
| 159 | Ga0501083_0058591 | 3300049744 | Bacteria | 2577 |
| 160 | Ga0501035_0000950 | 3300049822 | Bacteria | 30620 |
| 161 | Ga0501035_0001099 | 3300049822 | Bacteria | 28343 |
| 162 | Ga0501044_0000069 | 3300049823 | Bacteria | 125974 |
| 163 | Ga0501044_0000505 | 3300049823 | Bacteria | 47475 |
| 164 | Ga0501044_0016573 | 3300049823 | Bacteria | 7909 |
| 165 | Ga0501044_0021759 | 3300049823 | Bacteria | 6837 |
| 166 | Ga0501044_0033393 | 3300049823 | Bacteria | 5409 |
| 167 | nmdc:mga00v17_50920_c1 | 3300050491 | Bacteria | 2518 |
| 168 | nmdc:mga05p37_13669_c1 | 3300050507 | Bacteria | 9728 |
| 169 | nmdc:mga06r32_23940_c1 | 3300050510 | Bacteria | 3075 |
| 170 | nmdc:mga0n895_10925_c1 | 3300050512 | Bacteria | 8067 |
| 171 | Ga0495601_0000151 | 3300053077 | Bacteria | 38914 |
| 172 | Ga0495601_0000398 | 3300053077 | Bacteria | 23035 |
| 173 | Ga0495612_0005026 | 3300053078 | Bacteria | 5478 |
| 174 | Ga0495595_0000226 | 3300053084 | Bacteria | 22467 |
| 175 | Ga0495619_0000086 | 3300053085 | Bacteria | 69774 |
| 176 | Ga0495619_0000164 | 3300053085 | Bacteria | 48672 |
| 177 | Ga0495619_0001310 | 3300053085 | Bacteria | 16345 |
| 178 | Ga0500618_000820 | 3300053125 | Bacteria | 17067 |
| 179 | Ga0500636_0000026 | 3300053177 | Bacteria | 84046 |
| 180 | 2508727435 | 2508501050 | Bacteria | 9633614 |
| 181 | 2508727528 | 2508501050 | Bacteria | 9633614 |
| 182 | 2643772653 | 2643221550 | Bacteria | 4619371 |
| 183 | 2643983988 | 2643221595 | Bacteria | 6565519 |
| 184 | 2644130399 | 2643221623 | Bacteria | 5239945 |
| 185 | 2644156118 | 2643221627 | Bacteria | 6761570 |
| 186 | 2644208388 | 2643221637 | Bacteria | 5345260 |
| 187 | 2644492943 | 2643221688 | Bacteria | 5260751 |
| 188 | 2644651639 | 2643221718 | Bacteria | 5345506 |
| 189 | 2738805279 | 2738541293 | Bacteria | 7065685 |
| 190 | 2778178438 | 2775507266 | Bacteria | 7392367 |
| 191 | 2854920743 | 2854916844 | Bacteria | 5725939 |
| 192 | 2855021709 | 2855020534 | Bacteria | 3204685 |
| 193 | 2882457481 | 2882456835 | Bacteria | 6863978 |
| 194 | 2889915969 | 2889914905 | Bacteria | 5702301 |
| 195 | 2898797207 | 2898795034 | Bacteria | 4294459 |
| 196 | 2929143759 | 2929138655 | Bacteria | 5810547 |
| 197 | 2989351338 | 2989349275 | Bacteria | 6349068 |
| 198 | 2995396992 | 2995392953 | Bacteria | 4539380 |
| 199 | 3005423377 | 3005416602 | Bacteria | 7064308 |
| 200 | 8005320790 | 8005314921 | Bacteria | 7072929 |
| 201 | 8005658989 | 8005658619 | Bacteria | 4500593 |
| 202 | 8018154124 | 8018150411 | Bacteria | 5549903 |
| 203 | rootH2_10033089 | |||
| 204 | JGI25155J39150_1000026 | |||
| 205 | JGI25156J39149_1000028 | |||
| 206 | JGI25154J39366_1000046 | |||
| 207 | JGI25157J39369_1000358 | |||
| 208 | JGI25165J46597_1000351 | |||
| 209 | Ga0055524_1002437 | |||
| 210 | Ga0055524_1005015 | |||
| 211 | Ga0055528_1000670 | |||
| 212 | Ga0055528_1016432 | |||
| 213 | Ga0070670_100002696 | |||
| 214 | Ga0070660_100038030 | |||
| 215 | Ga0070660_100045916 | |||
| 216 | Ga0070660_100093785 | |||
| 217 | Ga0070661_100042616 | |||
| 218 | Ga0070671_100044660 | |||
| 219 | Ga0070709_10033412 | |||
| 220 | Ga0070711_100037173 | |||
| 221 | Ga0070681_10039320 | |||
| 222 | Ga0070684_100079315 | |||
| 223 | Ga0070686_100062768 | |||
| 224 | Ga0068855_100227886 | |||
| 225 | Ga0070664_100144087 | |||
| 226 | Ga0068856_100045068 | |||
| 227 | Ga0075364_10071934 | |||
| 228 | Ga0070712_100031357 | |||
| 229 | Ga0070712_100037315 | |||
| 230 | Ga0075434_100014987 | |||
| 231 | Ga0075434_100138306 | |||
| 232 | Ga0111539_10039071 | |||
| 233 | Ga0114129_10018987 | |||
| 234 | Ga0105248_10046308 | |||
| 235 | Ga0105238_10012030 | |||
| 236 | Ga0157372_10160864 | |||
| 237 | Ga0163163_10002541 | |||
| 238 | Ga0209435_100017 | |||
| 239 | Ga0209646_1000048 | |||
| 240 | Ga0209026_1000035 | |||
| 241 | Ga0209759_1000027 | |||
| 242 | Ga0209129_1003188 | |||
| 243 | Ga0209233_1000310 | |||
| 244 | Ga0209673_1001324 | |||
| 245 | Ga0209564_1004905 | |||
| 246 | Ga0209256_1001448 | |||
| 247 | Ga0207426_1003982 | |||
| 248 | Ga0207707_10033945 | |||
| 249 | Ga0207693_10002773 | |||
| 250 | Ga0207693_10088490 | |||
| 251 | Ga0207660_10051801 | |||
| 252 | Ga0207657_10006275 | |||
| 253 | Ga0207650_10001919 | |||
| 254 | Ga0207678_10016750 | |||
| 255 | Ga0207702_10035211 | |||
| 256 | Ga0207674_10028380 | |||
| 257 | Ga0265313_10016037 | |||
| 258 | Ga0265314_10009002 | |||
| 259 | Ga0265342_10006170 | |||
| 260 | Ga0307414_10003119 | |||
| 261 | Ga0307414_10027597 | |||
| 262 | Ga0307414_10042653 | |||
| 263 | Ga0373956_0008961 | |||
| 264 | Ga0373943_0020345 | |||
| 265 | Ga0373955_0004446 | |||
| 266 | Ga0373937_0021984 | |||
| 267 | Ga0373925_0001699 | |||
| 268 | Ga0495592_0001591 | |||
| 269 | Ga0495629_0000401 | |||
| 270 | Ga0495651_0012711 | |||
| 271 | Ga0495651_0063807 | |||
| 272 | Ga0495580_0103786 | |||
| 273 | Ga0495582_0009558 | |||
| 274 | Ga0495618_0054910 | |||
| 275 | Ga0495628_0011851 | |||
| 276 | Ga0495630_0099001 | |||
| 277 | Ga0495652_0004782 | |||
| 278 | Ga0495652_0072318 | |||
| 279 | Ga0495587_0059371 | |||
| 280 | Ga0495645_0003261 | |||
| 281 | Ga0495667_0013647 | |||
| 282 | Ga0495635_0004726 | |||
| 283 | Ga0495599_0025572 | |||
| 284 | Ga0495623_0001096 | |||
| 285 | Ga0495658_0000265 | |||
| 286 | Ga0495604_0005266 | |||
| 287 | Ga0495674_0069035 | |||
| 288 | Ga0495680_0003858 | |||
| 289 | Ga0495680_0028036 | |||
| 290 | Ga0495675_0019953 | |||
| 291 | Ga0495602_0000568 | |||
| 292 | Ga0496103_0013271 | |||
| 293 | Ga0496104_0001823 | |||
| 294 | Ga0496104_0001953 | |||
| 295 | Ga0496105_0007079 | |||
| 296 | Ga0496105_0009517 | |||
| 297 | Ga0496106_0015621 | |||
| 298 | Ga0496106_0038089 | |||
| 299 | Ga0496107_0037203 | |||
| 300 | Ga0496108_0000500 | |||
| 301 | Ga0496108_0018656 | |||
| 302 | Ga0496109_0000423 | |||
| 303 | Ga0496110_0007873 | |||
| 304 | Ga0496111_0018645 | |||
| 305 | Ga0496111_0045250 | |||
| 306 | Ga0496112_0028207 | |||
| 307 | Ga0496113_0000936 | |||
| 308 | Ga0496113_0086467 | |||
| 309 | Ga0496114_0037119 | |||
| 310 | Ga0496115_0066217 | |||
| 311 | Ga0496118_0067335 | |||
| 312 | Ga0496119_0051908 | |||
| 313 | Ga0496121_0000174 | |||
| 314 | Ga0496122_0000505 | |||
| 315 | Ga0496122_0001031 | |||
| 316 | Ga0496122_0043506 | |||
| 317 | Ga0496123_0000400 | |||
| 318 | Ga0496123_0005552 | |||
| 319 | Ga0496124_0001746 | |||
| 320 | Ga0496124_0070813 | |||
| 321 | Ga0496125_0013451 | |||
| 322 | Ga0496126_0001498 | |||
| 323 | Ga0496126_0059529 | |||
| 324 | Ga0501031_0000010 | |||
| 325 | Ga0501031_0018373 | |||
| 326 | Ga0501031_0028726 | |||
| 327 | Ga0501032_0000023 | |||
| 328 | Ga0501032_0004356 | |||
| 329 | Ga0501033_0000104 | |||
| 330 | Ga0501033_0000481 | |||
| 331 | Ga0501033_0000742 | |||
| 332 | Ga0501033_0003148 | |||
| 333 | Ga0501033_0009997 | |||
| 334 | Ga0501034_0000116 | |||
| 335 | Ga0501034_0001737 | |||
| 336 | Ga0501034_0006932 | |||
| 337 | Ga0501034_0051295 | |||
| 338 | Ga0501036_0000015 | |||
| 339 | Ga0501036_0012176 | |||
| 340 | Ga0501037_0000023 | |||
| 341 | Ga0501037_0010782 | |||
| 342 | Ga0501037_0012235 | |||
| 343 | Ga0501038_0000025 | |||
| 344 | Ga0501038_0015293 | |||
| 345 | Ga0501038_0016965 | |||
| 346 | Ga0501040_0042577 | |||
| 347 | Ga0501042_0056760 | |||
| 348 | Ga0501043_0000070 | |||
| 349 | Ga0501043_0158370 | |||
| 350 | Ga0501047_0001811 | |||
| 351 | Ga0501047_0005596 | |||
| 352 | Ga0501067_0041538 | |||
| 353 | Ga0501067_0061261 | |||
| 354 | Ga0501069_0014665 | |||
| 355 | Ga0501069_0033256 | |||
| 356 | Ga0501070_0001438 | |||
| 357 | Ga0501070_0057207 | |||
| 358 | Ga0501073_0023442 | |||
| 359 | Ga0501080_0039746 | |||
| 360 | Ga0501080_0080174 | |||
| 361 | Ga0501083_0058591 | |||
| 362 | Ga0501035_0000950 | |||
| 363 | Ga0501035_0001099 | |||
| 364 | Ga0501044_0000069 | |||
| 365 | Ga0501044_0000505 | |||
| 366 | Ga0501044_0016573 | |||
| 367 | Ga0501044_0021759 | |||
| 368 | Ga0501044_0033393 | |||
| 369 | nmdc:mga00v17_50920_c1 | |||
| 370 | nmdc:mga05p37_13669_c1 | |||
| 371 | nmdc:mga06r32_23940_c1 | |||
| 372 | nmdc:mga0n895_10925_c1 | |||
| 373 | Ga0495601_0000151 | |||
| 374 | Ga0495601_0000398 | |||
| 375 | Ga0495612_0005026 | |||
| 376 | Ga0495595_0000226 | |||
| 377 | Ga0495619_0000086 | |||
| 378 | Ga0495619_0000164 | |||
| 379 | Ga0495619_0001310 | |||
| 380 | Ga0500618_000820 | |||
| 381 | Ga0500636_0000026 | |||
| 382 | 2508727435 | |||
| 383 | 2508727528 | |||
| 384 | 2643772653 | |||
| 385 | 2643983988 | |||
| 386 | 2644130399 | |||
| 387 | 2644156118 | |||
| 388 | 2644208388 | |||
| 389 | 2644492943 | |||
| 390 | 2644651639 | |||
| 391 | 2738805279 | |||
| 392 | 2778178438 | |||
| 393 | 2854920743 | |||
| 394 | 2855021709 | |||
| 395 | 2882457481 | |||
| 396 | 2889915969 | |||
| 397 | 2898797207 | |||
| 398 | 2929143759 | |||
| 399 | 2989351338 | |||
| 400 | 2995396992 | |||
| 401 | 3005423377 | |||
| 402 | 8005320790 | |||
| 403 | 8005658989 | |||
| 404 | 8018154124 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2voy-assembly1.cif.gz_I | cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus | 0.8635 | 437 | 517 |
| 2b8e-assembly2.cif.gz_B | copa atp binding domain | 0.8527 | 303 | 517 |
| 2yj3-assembly1.cif.gz_A | conformational changes in the catalytic domain of the cpx-atpase copb- b upon nucleotide binding | 0.8482 | 284 | 519 |
| 5lbd-assembly2.cif.gz_B | crystal structure of the n-domain of hma6, a copper-transporting p-type atpase | 0.8479 | 319 | 432 |
| 2b8e-assembly1.cif.gz_A | copa atp binding domain | 0.8391 | 298 | 517 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4umvA03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9441 | 437 | 519 | 3.40.50.1000 |
| 2yj3A02 | Alpha Beta;3-Layer(aba) Sandwich;Calcium-transporting ATPase, cytoplasmic domain N;Calcium-transporting ATPase, cytoplasmic domain N | 0.9197 | 320 | 435 | 3.40.1110.10 |
| af_I1N912_658_734_3.40.1110.10 | Alpha Beta;3-Layer(aba) Sandwich;Calcium-transporting ATPase, cytoplasmic domain N;Calcium-transporting ATPase, cytoplasmic domain N | 0.9072 | 315 | 386 | 3.40.1110.10 |
| af_A0A1D6NG99_61_142_2.70.150.10 | Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.9069 | 122 | 199 | 2.70.150.10 |
| 5ksdA02 | Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.8928 | 122 | 202 | 2.70.150.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3D1LC62-F1-model_v4 | Heavy metal translocating P-type ATPase | 0.9439 | 120 | 200 |
GO:0005507
GO:0016020 GO:0043682 GO:0055070 |
| AF-A0A530A2G4-F1-model_v4 | deleted | 0.9397 | 118 | 204 |
|
| AF-A0A3D1LC62-F1-model_v4 | Heavy metal translocating P-type ATPase | 0.9118 | 120 | 200 |
GO:0005507
GO:0016020 GO:0043682 GO:0055070 |
| AF-A0A2T5IVR8-F1-model_v4 | Uncharacterized protein | 0.9108 | 317 | 435 |
GO:0000166
GO:0016020 GO:0022857 |
| AF-A0A4P5T0S6-F1-model_v4 | Heavy metal translocating P-type ATPase | 0.9054 | 299 | 587 |
GO:0005507
GO:0005524 GO:0016020 GO:0016887 GO:0043682 GO:0055070 |