F309448
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 202 | 137 | 404 | 374 |
Family's Representative Sequence
| Representative Sequence | 3300005355|Ga0070671_100117645|Ga0070671_1001176453 |
| Length | 413 |
| Sequence | VARRSASSPPAKPSGRGRAAAANHATLRPVNPPSLSFYEFFAGGGMARLGLGEGWACRFANDFDPVKAATYRDNFPDAGEHFHEGDVFALSAADLPGRADLAWASSPCQDFSLAGARAGLAGGRSSAFFGFWRLIEALGAEDRAPRVLVIENVSGLLSSKRGEDFTALAQALADEGYSFGALEVDAADFLPQSRPRVFVIATKTPPGGHLVGDSRYQTRAVKLAAARLPPALAERWIWWGLGAPPARNLDLAALLEPDGAVAWHSAERTARWLELMAPLHRARLEARRDRGERIVGALYRRMRLADGRKVQRAEVRFDGLAGCLRTPRGGSSRQVLAVVEAGQVRTRLLTAREAARLMGLTDSYQLPRAATSALHVAGDGVAVPVVRWLAQELLEPLLGAAPRPAARAVAGSR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 3 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 4 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 5 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 6 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 7 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 8 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 11 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 21 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 23 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 24 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 25 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 26 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 27 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 28 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 29 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 31 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 32 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 41 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 42 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 43 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 44 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 46 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 49 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 71 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 72 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 73 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 74 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 75 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 76 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 77 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 78 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 79 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 80 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 81 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 82 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 83 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 84 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 85 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 86 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 87 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 88 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 89 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 90 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 91 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 92 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 93 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 94 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 95 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 96 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 97 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 98 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 110 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 111 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 112 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 119 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 120 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 121 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 122 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 123 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 124 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 125 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 126 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 128 | 2643221598 | Phenylobacterium sp. Root700 | Isolate | Unclassified |
| 129 | 2643221614 | Phenylobacterium sp. Root77 | Isolate | Unclassified |
| 130 | 2643221661 | Phenylobacterium sp. Root1277 | Isolate | Unclassified |
| 131 | 2643221666 | Phenylobacterium sp. Root1290 | Isolate | Unclassified |
| 132 | 2791355048 | Caulobacter flavus CGMCC1 15093 | Isolate | Rhizosphere |
| 133 | 2843744320 | Caulobacter flavus RHGG3 | Isolate | Unclassified |
| 134 | 2849560528 | Caulobacter zeae 410 | Isolate | Unclassified |
| 135 | 2849573788 | Caulobacter endophyticus 774 | Isolate | Unclassified |
| 136 | 2851153111 | Caulobacter radicis 736 | Isolate | Unclassified |
| 137 | 2898329390 | Caulobacter sp. 602-2 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.05 |
| Metatranscriptomes | 0 |
| Isolates | 4.95 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 16.34 |
| Nodule | 0 |
| Rhizoplane | 3.47 |
| Rhizosphere | 69.8 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.5 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070671_100117645 | 3300005355 | Bacteria | 2235 |
| 2 | Ga0055537_1003458 | 3300003773 | Bacteria | 4855 |
| 3 | Ga0055536_1000993 | 3300003781 | Bacteria | 18004 |
| 4 | Ga0055528_1002975 | 3300003790 | Bacteria | 8778 |
| 5 | Ga0055528_1003505 | 3300003790 | Bacteria | 7821 |
| 6 | Ga0055530_10005529 | 3300003791 | Bacteria | 5967 |
| 7 | Ga0055531_10001318 | 3300003794 | Bacteria | 18618 |
| 8 | Ga0055531_10001786 | 3300003794 | Bacteria | 15286 |
| 9 | Ga0065165_1000294 | 3300005262 | Bacteria | 84454 |
| 10 | Ga0065165_1013395 | 3300005262 | Bacteria | 3263 |
| 11 | Ga0070683_100000006 | 3300005329 | Bacteria | 361071 |
| 12 | Ga0070670_100138142 | 3300005331 | Bacteria | 2107 |
| 13 | Ga0068869_100020325 | 3300005334 | Bacteria | 4552 |
| 14 | Ga0070680_100001074 | 3300005336 | Bacteria | 19621 |
| 15 | Ga0070661_100158015 | 3300005344 | Bacteria | 1716 |
| 16 | Ga0070668_100001267 | 3300005347 | Bacteria | 18028 |
| 17 | Ga0070668_100004942 | 3300005347 | Bacteria | 9873 |
| 18 | Ga0070669_100062570 | 3300005353 | Bacteria | 2737 |
| 19 | Ga0070671_100039744 | 3300005355 | Bacteria | 3905 |
| 20 | Ga0070667_100036280 | 3300005367 | Bacteria | 4133 |
| 21 | Ga0070681_10011447 | 3300005458 | Bacteria | 8780 |
| 22 | Ga0070681_10087875 | 3300005458 | Bacteria | 3061 |
| 23 | Ga0070679_100011224 | 3300005530 | Bacteria | 8542 |
| 24 | Ga0070684_100000050 | 3300005535 | Bacteria | 78974 |
| 25 | Ga0070665_100000187 | 3300005548 | Bacteria | 110095 |
| 26 | Ga0070665_100074804 | 3300005548 | Bacteria | 3393 |
| 27 | Ga0068855_100107706 | 3300005563 | Bacteria | 3202 |
| 28 | Ga0068855_100131211 | 3300005563 | Bacteria | 2861 |
| 29 | Ga0068855_100151556 | 3300005563 | Bacteria | 2636 |
| 30 | Ga0068855_100241538 | 3300005563 | Bacteria | 2018 |
| 31 | Ga0068855_100312293 | 3300005563 | Bacteria | 1739 |
| 32 | Ga0070664_100011307 | 3300005564 | Bacteria | 7241 |
| 33 | Ga0068852_100133326 | 3300005616 | Unclassified | 2290 |
| 34 | Ga0068859_100147054 | 3300005617 | Bacteria | 2432 |
| 35 | Ga0068864_100023839 | 3300005618 | Bacteria | 5142 |
| 36 | Ga0068864_100027502 | 3300005618 | Bacteria | 4804 |
| 37 | Ga0068864_100394864 | 3300005618 | Bacteria | 1313 |
| 38 | Ga0068861_100068600 | 3300005719 | Bacteria | 2741 |
| 39 | Ga0068863_100035585 | 3300005841 | Bacteria | 4742 |
| 40 | Ga0068863_100302796 | 3300005841 | Bacteria | 1551 |
| 41 | Ga0068860_100000066 | 3300005843 | Bacteria | 182836 |
| 42 | Ga0068860_100058126 | 3300005843 | Bacteria | 3676 |
| 43 | Ga0068862_100017679 | 3300005844 | Bacteria | 5935 |
| 44 | Ga0068862_100019690 | 3300005844 | Bacteria | 5634 |
| 45 | Ga0068862_100047427 | 3300005844 | Bacteria | 3666 |
| 46 | Ga0070717_10090235 | 3300006028 | Bacteria | 2586 |
| 47 | Ga0075369_10001640 | 3300006186 | Bacteria | 7713 |
| 48 | Ga0075366_10009171 | 3300006195 | Bacteria | 5517 |
| 49 | Ga0075366_10049303 | 3300006195 | Bacteria | 2499 |
| 50 | Ga0097620_100147051 | 3300006931 | Bacteria | 2432 |
| 51 | Ga0105240_10003899 | 3300009093 | Bacteria | 23042 |
| 52 | Ga0105240_10004076 | 3300009093 | Bacteria | 22480 |
| 53 | Ga0105240_10024321 | 3300009093 | Bacteria | 7989 |
| 54 | Ga0105240_10121409 | 3300009093 | Bacteria | 3146 |
| 55 | Ga0105240_10144486 | 3300009093 | Bacteria | 2840 |
| 56 | Ga0105240_10160232 | 3300009093 | Bacteria | 2673 |
| 57 | Ga0105240_10336696 | 3300009093 | Bacteria | 1715 |
| 58 | Ga0105248_10000203 | 3300009177 | Bacteria | 68397 |
| 59 | Ga0105248_10114501 | 3300009177 | Bacteria | 3042 |
| 60 | Ga0105238_10201554 | 3300009551 | Bacteria | 1965 |
| 61 | Ga0105249_10381060 | 3300009553 | Bacteria | 1436 |
| 62 | Ga0157373_10000590 | 3300013100 | Bacteria | 28279 |
| 63 | Ga0157373_10007443 | 3300013100 | Bacteria | 8145 |
| 64 | Ga0157369_10073191 | 3300013105 | Bacteria | 3677 |
| 65 | Ga0157369_10217785 | 3300013105 | Bacteria | 1999 |
| 66 | Ga0163163_10134225 | 3300014325 | Bacteria | 2515 |
| 67 | Ga0213876_10000391 | 3300021384 | Bacteria | 36827 |
| 68 | Ga0213876_10022333 | 3300021384 | Bacteria | 3346 |
| 69 | Ga0213875_10083241 | 3300021388 | Bacteria | 1493 |
| 70 | Ga0209565_1000149 | 3300025263 | Bacteria | 96195 |
| 71 | Ga0209673_1000932 | 3300025273 | Bacteria | 36724 |
| 72 | Ga0209676_1000272 | 3300025292 | Bacteria | 107765 |
| 73 | Ga0209564_1015081 | 3300025295 | Bacteria | 3167 |
| 74 | Ga0209758_1000238 | 3300025297 | Bacteria | 115807 |
| 75 | Ga0209050_1000344 | 3300025298 | Bacteria | 92033 |
| 76 | Ga0209256_1001928 | 3300025299 | Bacteria | 18915 |
| 77 | Ga0209256_1014045 | 3300025299 | Bacteria | 2916 |
| 78 | Ga0209257_1000769 | 3300025304 | Bacteria | 47756 |
| 79 | Ga0207705_10003550 | 3300025909 | Bacteria | 11875 |
| 80 | Ga0207695_10003252 | 3300025913 | Bacteria | 23096 |
| 81 | Ga0207695_10004769 | 3300025913 | Bacteria | 18340 |
| 82 | Ga0207695_10009173 | 3300025913 | Bacteria | 12273 |
| 83 | Ga0207695_10087431 | 3300025913 | Bacteria | 3139 |
| 84 | Ga0207660_10000832 | 3300025917 | Bacteria | 20361 |
| 85 | Ga0207657_10001914 | 3300025919 | Bacteria | 22475 |
| 86 | Ga0207652_10045156 | 3300025921 | Bacteria | 3755 |
| 87 | Ga0207652_10110177 | 3300025921 | Bacteria | 2441 |
| 88 | Ga0207681_10048528 | 3300025923 | Bacteria | 2866 |
| 89 | Ga0207711_10000996 | 3300025941 | Bacteria | 27164 |
| 90 | Ga0207711_10031421 | 3300025941 | Bacteria | 4482 |
| 91 | Ga0207689_10029828 | 3300025942 | Bacteria | 4549 |
| 92 | Ga0207661_10000011 | 3300025944 | Bacteria | 361200 |
| 93 | Ga0207667_10026803 | 3300025949 | Bacteria | 6289 |
| 94 | Ga0207667_10108644 | 3300025949 | Bacteria | 2861 |
| 95 | Ga0207667_10160523 | 3300025949 | Bacteria | 2312 |
| 96 | Ga0207667_10168517 | 3300025949 | Bacteria | 2251 |
| 97 | Ga0207667_10390306 | 3300025949 | Bacteria | 1418 |
| 98 | Ga0207668_10004372 | 3300025972 | Bacteria | 8297 |
| 99 | Ga0207668_10079063 | 3300025972 | Bacteria | 2377 |
| 100 | Ga0207640_10042327 | 3300025981 | Bacteria | 2904 |
| 101 | Ga0207658_10019674 | 3300025986 | Bacteria | 4669 |
| 102 | Ga0207639_10063409 | 3300026041 | Bacteria | 2862 |
| 103 | Ga0207676_10037159 | 3300026095 | Bacteria | 3710 |
| 104 | Ga0207676_10097912 | 3300026095 | Bacteria | 2424 |
| 105 | Ga0207675_100098814 | 3300026118 | Bacteria | 2749 |
| 106 | Ga0207698_10154744 | 3300026142 | Bacteria | 1995 |
| 107 | Ga0268266_10000003 | 3300028379 | Bacteria | 1701703 |
| 108 | Ga0268265_10006179 | 3300028380 | Bacteria | 8112 |
| 109 | Ga0268265_10050529 | 3300028380 | Bacteria | 3133 |
| 110 | Ga0268265_10106546 | 3300028380 | Bacteria | 2277 |
| 111 | Ga0268265_10113270 | 3300028380 | Bacteria | 2219 |
| 112 | Ga0268264_10000113 | 3300028381 | Bacteria | 203262 |
| 113 | Ga0268264_10204853 | 3300028381 | Bacteria | 1807 |
| 114 | Ga0265319_1006439 | 3300028563 | Bacteria | 5436 |
| 115 | Ga0265319_1037999 | 3300028563 | Bacteria | 1638 |
| 116 | Ga0265318_10000256 | 3300028577 | Bacteria | 46214 |
| 117 | Ga0307517_10022645 | 3300028786 | Bacteria | 7861 |
| 118 | Ga0265338_10094993 | 3300028800 | Bacteria | 2451 |
| 119 | Ga0265328_10026561 | 3300031239 | Bacteria | 2176 |
| 120 | Ga0265320_10000104 | 3300031240 | Bacteria | 72302 |
| 121 | Ga0265329_10000402 | 3300031242 | Bacteria | 22687 |
| 122 | Ga0265340_10003692 | 3300031247 | Bacteria | 8618 |
| 123 | Ga0265339_10010194 | 3300031249 | Bacteria | 5850 |
| 124 | Ga0265331_10000253 | 3300031250 | Bacteria | 63343 |
| 125 | Ga0265327_10000110 | 3300031251 | Bacteria | 181251 |
| 126 | Ga0265316_10007043 | 3300031344 | Bacteria | 10655 |
| 127 | Ga0307513_10000045 | 3300031456 | Bacteria | 158626 |
| 128 | Ga0307513_10000635 | 3300031456 | Bacteria | 50437 |
| 129 | Ga0265313_10000918 | 3300031595 | Bacteria | 29448 |
| 130 | Ga0265314_10001180 | 3300031711 | Bacteria | 29993 |
| 131 | Ga0265314_10071656 | 3300031711 | Bacteria | 2318 |
| 132 | Ga0265342_10001248 | 3300031712 | Bacteria | 24004 |
| 133 | Ga0307516_10000006 | 3300031730 | Bacteria | 298586 |
| 134 | Ga0307414_10065060 | 3300032004 | Bacteria | 2600 |
| 135 | Ga0307510_10006409 | 3300033180 | Bacteria | 14030 |
| 136 | Ga0395899_0000115 | 3300037312 | Bacteria | 133287 |
| 137 | Ga0395900_0000002 | 3300037418 | Bacteria | 671103 |
| 138 | Ga0395900_0105489 | 3300037418 | Bacteria | 2895 |
| 139 | Ga0395898_0078265 | 3300037466 | Bacteria | 3190 |
| 140 | Ga0395898_0141582 | 3300037466 | Bacteria | 2302 |
| 141 | Ga0395905_0075769 | 3300037471 | Bacteria | 3153 |
| 142 | Ga0395905_0171587 | 3300037471 | Bacteria | 2037 |
| 143 | Ga0436364_0250081 | 3300037853 | Bacteria | 1696 |
| 144 | Ga0395901_0000021 | 3300038443 | Bacteria | 307734 |
| 145 | Ga0436365_0439594 | 3300039437 | Bacteria | 58263 |
| 146 | Ga0436365_1139123 | 3300039437 | Bacteria | 2465 |
| 147 | Ga0436365_1349212 | 3300039437 | Bacteria | 2758 |
| 148 | Ga0436363_1711824 | 3300039450 | Bacteria | 3572 |
| 149 | Ga0466957_0134588 | 3300044842 | Bacteria | 1587 |
| 150 | Ga0495638_0003383 | 3300046460 | Bacteria | 12566 |
| 151 | Ga0495642_0003383 | 3300046528 | Bacteria | 6297 |
| 152 | Ga0495645_0086961 | 3300046543 | Bacteria | 2236 |
| 153 | Ga0495668_0036877 | 3300046616 | Bacteria | 2738 |
| 154 | Ga0495668_0128512 | 3300046616 | Bacteria | 1387 |
| 155 | Ga0495611_0028788 | 3300046648 | Bacteria | 2434 |
| 156 | Ga0495625_0059871 | 3300046660 | Bacteria | 2700 |
| 157 | Ga0495669_0000014 | 3300046684 | Bacteria | 140832 |
| 158 | Ga0495669_0000222 | 3300046684 | Bacteria | 34149 |
| 159 | Ga0495669_0031989 | 3300046684 | Bacteria | 2311 |
| 160 | Ga0495669_0061634 | 3300046684 | Bacteria | 1698 |
| 161 | Ga0495672_0000252 | 3300047320 | Bacteria | 75012 |
| 162 | Ga0495681_0056715 | 3300047470 | Bacteria | 1822 |
| 163 | Ga0495686_0017528 | 3300047472 | Bacteria | 4820 |
| 164 | Ga0496100_0283943 | 3300048903 | Bacteria | 1235 |
| 165 | Ga0496110_0095339 | 3300048913 | Bacteria | 2665 |
| 166 | Ga0496112_0114821 | 3300048915 | Bacteria | 2663 |
| 167 | Ga0496112_0174256 | 3300048915 | Bacteria | 2116 |
| 168 | Ga0496115_0000453 | 3300048918 | Bacteria | 32929 |
| 169 | Ga0496115_0016199 | 3300048918 | Bacteria | 5672 |
| 170 | Ga0496115_0052067 | 3300048918 | Bacteria | 3283 |
| 171 | Ga0501032_0151409 | 3300049569 | Bacteria | 1525 |
| 172 | Ga0501033_0029569 | 3300049570 | Bacteria | 4117 |
| 173 | Ga0501047_0004013 | 3300049581 | Bacteria | 13836 |
| 174 | Ga0501047_0108274 | 3300049581 | Bacteria | 2661 |
| 175 | Ga0501067_0005903 | 3300049583 | Bacteria | 6786 |
| 176 | Ga0501072_0003016 | 3300049588 | Bacteria | 12697 |
| 177 | Ga0501044_0003386 | 3300049823 | Bacteria | 17962 |
| 178 | Ga0501044_0337377 | 3300049823 | Bacteria | 1429 |
| 179 | nmdc:mga0k408_20127_c1 | 3300050493 | Bacteria | 3734 |
| 180 | nmdc:mga07m45_89895_c1 | 3300050496 | Bacteria | 1759 |
| 181 | Ga0500643_002143 | 3300053087 | Bacteria | 10454 |
| 182 | Ga0500641_0003690 | 3300053096 | Bacteria | 5406 |
| 183 | Ga0500556_0004883 | 3300053104 | Bacteria | 3798 |
| 184 | Ga0500556_0005094 | 3300053104 | Bacteria | 3717 |
| 185 | Ga0500562_002394 | 3300053108 | Bacteria | 4710 |
| 186 | Ga0500562_012147 | 3300053108 | Bacteria | 2187 |
| 187 | Ga0500616_0007673 | 3300053153 | Bacteria | 6814 |
| 188 | Ga0500616_0023154 | 3300053153 | Bacteria | 3462 |
| 189 | Ga0500645_001291 | 3300053730 | Bacteria | 13043 |
| 190 | Ga0500645_001656 | 3300053730 | Bacteria | 10949 |
| 191 | Ga0501084_0070370 | 3300054114 | Bacteria | 2929 |
| 192 | Ga0501082_0025486 | 3300060353 | Bacteria | 5095 |
| 193 | 2643998617 | 2643221598 | Bacteria | 4578346 |
| 194 | 2644087465 | 2643221614 | Bacteria | 4260023 |
| 195 | 2644344491 | 2643221661 | Bacteria | 4267604 |
| 196 | 2644366825 | 2643221666 | Bacteria | 4265935 |
| 197 | 2792461857 | 2791355048 | Bacteria | 5832535 |
| 198 | 2843745220 | 2843744320 | Bacteria | 5659202 |
| 199 | 2849563986 | 2849560528 | Bacteria | 5393480 |
| 200 | 2849577639 | 2849573788 | Bacteria | 5421256 |
| 201 | 2851157550 | 2851153111 | Bacteria | 5542585 |
| 202 | 2898330446 | 2898329390 | Bacteria | 5168154 |
| 203 | Ga0070671_100117645 | |||
| 204 | Ga0055537_1003458 | |||
| 205 | Ga0055536_1000993 | |||
| 206 | Ga0055528_1002975 | |||
| 207 | Ga0055528_1003505 | |||
| 208 | Ga0055530_10005529 | |||
| 209 | Ga0055531_10001318 | |||
| 210 | Ga0055531_10001786 | |||
| 211 | Ga0065165_1000294 | |||
| 212 | Ga0065165_1013395 | |||
| 213 | Ga0070683_100000006 | |||
| 214 | Ga0070670_100138142 | |||
| 215 | Ga0068869_100020325 | |||
| 216 | Ga0070680_100001074 | |||
| 217 | Ga0070661_100158015 | |||
| 218 | Ga0070668_100001267 | |||
| 219 | Ga0070668_100004942 | |||
| 220 | Ga0070669_100062570 | |||
| 221 | Ga0070671_100039744 | |||
| 222 | Ga0070667_100036280 | |||
| 223 | Ga0070681_10011447 | |||
| 224 | Ga0070681_10087875 | |||
| 225 | Ga0070679_100011224 | |||
| 226 | Ga0070684_100000050 | |||
| 227 | Ga0070665_100000187 | |||
| 228 | Ga0070665_100074804 | |||
| 229 | Ga0068855_100107706 | |||
| 230 | Ga0068855_100131211 | |||
| 231 | Ga0068855_100151556 | |||
| 232 | Ga0068855_100241538 | |||
| 233 | Ga0068855_100312293 | |||
| 234 | Ga0070664_100011307 | |||
| 235 | Ga0068852_100133326 | |||
| 236 | Ga0068859_100147054 | |||
| 237 | Ga0068864_100023839 | |||
| 238 | Ga0068864_100027502 | |||
| 239 | Ga0068864_100394864 | |||
| 240 | Ga0068861_100068600 | |||
| 241 | Ga0068863_100035585 | |||
| 242 | Ga0068863_100302796 | |||
| 243 | Ga0068860_100000066 | |||
| 244 | Ga0068860_100058126 | |||
| 245 | Ga0068862_100017679 | |||
| 246 | Ga0068862_100019690 | |||
| 247 | Ga0068862_100047427 | |||
| 248 | Ga0070717_10090235 | |||
| 249 | Ga0075369_10001640 | |||
| 250 | Ga0075366_10009171 | |||
| 251 | Ga0075366_10049303 | |||
| 252 | Ga0097620_100147051 | |||
| 253 | Ga0105240_10003899 | |||
| 254 | Ga0105240_10004076 | |||
| 255 | Ga0105240_10024321 | |||
| 256 | Ga0105240_10121409 | |||
| 257 | Ga0105240_10144486 | |||
| 258 | Ga0105240_10160232 | |||
| 259 | Ga0105240_10336696 | |||
| 260 | Ga0105248_10000203 | |||
| 261 | Ga0105248_10114501 | |||
| 262 | Ga0105238_10201554 | |||
| 263 | Ga0105249_10381060 | |||
| 264 | Ga0157373_10000590 | |||
| 265 | Ga0157373_10007443 | |||
| 266 | Ga0157369_10073191 | |||
| 267 | Ga0157369_10217785 | |||
| 268 | Ga0163163_10134225 | |||
| 269 | Ga0213876_10000391 | |||
| 270 | Ga0213876_10022333 | |||
| 271 | Ga0213875_10083241 | |||
| 272 | Ga0209565_1000149 | |||
| 273 | Ga0209673_1000932 | |||
| 274 | Ga0209676_1000272 | |||
| 275 | Ga0209564_1015081 | |||
| 276 | Ga0209758_1000238 | |||
| 277 | Ga0209050_1000344 | |||
| 278 | Ga0209256_1001928 | |||
| 279 | Ga0209256_1014045 | |||
| 280 | Ga0209257_1000769 | |||
| 281 | Ga0207705_10003550 | |||
| 282 | Ga0207695_10003252 | |||
| 283 | Ga0207695_10004769 | |||
| 284 | Ga0207695_10009173 | |||
| 285 | Ga0207695_10087431 | |||
| 286 | Ga0207660_10000832 | |||
| 287 | Ga0207657_10001914 | |||
| 288 | Ga0207652_10045156 | |||
| 289 | Ga0207652_10110177 | |||
| 290 | Ga0207681_10048528 | |||
| 291 | Ga0207711_10000996 | |||
| 292 | Ga0207711_10031421 | |||
| 293 | Ga0207689_10029828 | |||
| 294 | Ga0207661_10000011 | |||
| 295 | Ga0207667_10026803 | |||
| 296 | Ga0207667_10108644 | |||
| 297 | Ga0207667_10160523 | |||
| 298 | Ga0207667_10168517 | |||
| 299 | Ga0207667_10390306 | |||
| 300 | Ga0207668_10004372 | |||
| 301 | Ga0207668_10079063 | |||
| 302 | Ga0207640_10042327 | |||
| 303 | Ga0207658_10019674 | |||
| 304 | Ga0207639_10063409 | |||
| 305 | Ga0207676_10037159 | |||
| 306 | Ga0207676_10097912 | |||
| 307 | Ga0207675_100098814 | |||
| 308 | Ga0207698_10154744 | |||
| 309 | Ga0268266_10000003 | |||
| 310 | Ga0268265_10006179 | |||
| 311 | Ga0268265_10050529 | |||
| 312 | Ga0268265_10106546 | |||
| 313 | Ga0268265_10113270 | |||
| 314 | Ga0268264_10000113 | |||
| 315 | Ga0268264_10204853 | |||
| 316 | Ga0265319_1006439 | |||
| 317 | Ga0265319_1037999 | |||
| 318 | Ga0265318_10000256 | |||
| 319 | Ga0307517_10022645 | |||
| 320 | Ga0265338_10094993 | |||
| 321 | Ga0265328_10026561 | |||
| 322 | Ga0265320_10000104 | |||
| 323 | Ga0265329_10000402 | |||
| 324 | Ga0265340_10003692 | |||
| 325 | Ga0265339_10010194 | |||
| 326 | Ga0265331_10000253 | |||
| 327 | Ga0265327_10000110 | |||
| 328 | Ga0265316_10007043 | |||
| 329 | Ga0307513_10000045 | |||
| 330 | Ga0307513_10000635 | |||
| 331 | Ga0265313_10000918 | |||
| 332 | Ga0265314_10001180 | |||
| 333 | Ga0265314_10071656 | |||
| 334 | Ga0265342_10001248 | |||
| 335 | Ga0307516_10000006 | |||
| 336 | Ga0307414_10065060 | |||
| 337 | Ga0307510_10006409 | |||
| 338 | Ga0395899_0000115 | |||
| 339 | Ga0395900_0000002 | |||
| 340 | Ga0395900_0105489 | |||
| 341 | Ga0395898_0078265 | |||
| 342 | Ga0395898_0141582 | |||
| 343 | Ga0395905_0075769 | |||
| 344 | Ga0395905_0171587 | |||
| 345 | Ga0436364_0250081 | |||
| 346 | Ga0395901_0000021 | |||
| 347 | Ga0436365_0439594 | |||
| 348 | Ga0436365_1139123 | |||
| 349 | Ga0436365_1349212 | |||
| 350 | Ga0436363_1711824 | |||
| 351 | Ga0466957_0134588 | |||
| 352 | Ga0495638_0003383 | |||
| 353 | Ga0495642_0003383 | |||
| 354 | Ga0495645_0086961 | |||
| 355 | Ga0495668_0036877 | |||
| 356 | Ga0495668_0128512 | |||
| 357 | Ga0495611_0028788 | |||
| 358 | Ga0495625_0059871 | |||
| 359 | Ga0495669_0000014 | |||
| 360 | Ga0495669_0000222 | |||
| 361 | Ga0495669_0031989 | |||
| 362 | Ga0495669_0061634 | |||
| 363 | Ga0495672_0000252 | |||
| 364 | Ga0495681_0056715 | |||
| 365 | Ga0495686_0017528 | |||
| 366 | Ga0496100_0283943 | |||
| 367 | Ga0496110_0095339 | |||
| 368 | Ga0496112_0114821 | |||
| 369 | Ga0496112_0174256 | |||
| 370 | Ga0496115_0000453 | |||
| 371 | Ga0496115_0016199 | |||
| 372 | Ga0496115_0052067 | |||
| 373 | Ga0501032_0151409 | |||
| 374 | Ga0501033_0029569 | |||
| 375 | Ga0501047_0004013 | |||
| 376 | Ga0501047_0108274 | |||
| 377 | Ga0501067_0005903 | |||
| 378 | Ga0501072_0003016 | |||
| 379 | Ga0501044_0003386 | |||
| 380 | Ga0501044_0337377 | |||
| 381 | nmdc:mga0k408_20127_c1 | |||
| 382 | nmdc:mga07m45_89895_c1 | |||
| 383 | Ga0500643_002143 | |||
| 384 | Ga0500641_0003690 | |||
| 385 | Ga0500556_0004883 | |||
| 386 | Ga0500556_0005094 | |||
| 387 | Ga0500562_002394 | |||
| 388 | Ga0500562_012147 | |||
| 389 | Ga0500616_0007673 | |||
| 390 | Ga0500616_0023154 | |||
| 391 | Ga0500645_001291 | |||
| 392 | Ga0500645_001656 | |||
| 393 | Ga0501084_0070370 | |||
| 394 | Ga0501082_0025486 | |||
| 395 | 2643998617 | |||
| 396 | 2644087465 | |||
| 397 | 2644344491 | |||
| 398 | 2644366825 | |||
| 399 | 2792461857 | |||
| 400 | 2843745220 | |||
| 401 | 2849563986 | |||
| 402 | 2849577639 | |||
| 403 | 2851157550 | |||
| 404 | 2898330446 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1svu-assembly2.cif.gz_B | structure of the q237w mutant of hhai dna methyltransferase: an insight into protein-protein interactions | 0.8258 | 8 | 369 |
| 1svu-assembly2.cif.gz_B | structure of the q237w mutant of hhai dna methyltransferase: an insight into protein-protein interactions | 0.7843 | 8 | 369 |
| 2uz4-assembly1.cif.gz_A | hhai dna methyltransferase r165n mutant complex with 13mer gcgc-gmgc oligonucleotide and sah | 0.7754 | 6 | 369 |
| 10mh-assembly1.cif.gz_A | ternary structure of hhai methyltransferase with adohcy and hemimethylated dna containing 5,6-dihydro-5-azacytosine at the target | 0.7742 | 1 | 369 |
| 1fjx-assembly1.cif.gz_A | structure of ternary complex of hhai methyltransferase mutant (t250g) in complex with dna and adohcy | 0.7723 | 6 | 369 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q9VKB3_194_330_3.90.120.10 | Alpha Beta;Alpha-Beta Complex;DNA Methylase; Chain A, domain 2;DNA Methylase, subunit A, domain 2 | 0.8916 | 317 | 353 | 3.90.120.10 |
| 3ptaA01 | Alpha Beta;Alpha-Beta Complex;DNA Methylase; Chain A, domain 2;DNA Methylase, subunit A, domain 2 | 0.8852 | 319 | 357 | 3.90.120.10 |
| af_Q54JH6_228_347_3.90.120.10 | Alpha Beta;Alpha-Beta Complex;DNA Methylase; Chain A, domain 2;DNA Methylase, subunit A, domain 2 | 0.87 | 318 | 353 | 3.90.120.10 |
| 1g55A01 | Alpha Beta;Alpha-Beta Complex;DNA Methylase; Chain A, domain 2;DNA Methylase, subunit A, domain 2 | 0.8621 | 318 | 353 | 3.90.120.10 |
| af_P40999_197_312_3.90.120.10 | Alpha Beta;Alpha-Beta Complex;DNA Methylase; Chain A, domain 2;DNA Methylase, subunit A, domain 2 | 0.8512 | 318 | 353 | 3.90.120.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2X4TTE9-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9468 | 114 | 369 |
GO:0003677
GO:0009307 GO:0032259 GO:0044027 GO:0051719 GO:0051720 |
| AF-A0A494WW15-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9232 | 4 | 379 |
GO:0009307
GO:0032259 GO:0051719 GO:0051720 |
| AF-A0A1C3FC74-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9218 | 4 | 376 |
GO:0009307
GO:0032259 GO:0051719 GO:0051720 |
| AF-A0A0A5I4W0-F1-model_v4 | deleted | 0.9205 | 8 | 373 |
|
| AF-A0A525IEU2-F1-model_v4 | DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) | 0.9196 | 2 | 376 |
GO:0009307
GO:0032259 GO:0051719 GO:0051720 |