F310141

General Info

Members Datasets Scaffolds Average Seq Length
202 105 404 694

Family's Representative Sequence

Representative Sequence 3300039093|Ga0400489_32492|Ga0400489_32492_1825_4065
Length 746
Sequence VFEEIKKRNGRIMEFDSSKITAAITKAGRATGEFNDREAKKLTLKVLTLAHELRLGAIPEVEEIQDIVERVLLDSPFYRSAKAYILYREQHAQIRSIATKANVDLVDHYIRKLDWKVKENSNMCYSLQGLNNYISSDITSEYWLNRIYPPEIRKAHKSGAIHVHDLSLLSVYCVGWDLIDLLRSGFKGVEGKVESAPPSHLRSALGQIVNFFYTLQGEAAGAQALSNFDTLLAPFIRYDDLGYVDVKQALQEFVFNINIPTRVGFQTPFTNITMDLYVPVILKDHPVIIGGREREETYAQFQKEMDMINRAFAEVMMEGDAKGRVFTFPIPTYNITADFDWDNPNFEAIWKMTGKYGIPYFSNFVNSDMSPEDARSMCCRLRLDNRELLKRGGGLFGANPLTGSIGVVTINLPRIGYESNSEEAFFDNLTAMIDLAAESLAIKRKVLEQFTESNLYPYSKFYLRQIKERTGIYWQNHFSTIGIIGMNEALINFLGVNITADAGQSFALKVMDFIREKLSALQDKTGHHYNLEATPAEGTSYRLAMLDKQRHPDIICANDADACTNKTPYYTNSTQLPVNYSDDIFETLTLQDELQCKYTGGTVMHIFLGEQISNIEAIKTLIRKVSNDYHLPYFTLTPTFSVCPSHGYLAGEKLTCPHCSQDTEVYSRVVGYLRPVKQWNDGKQAEFAKRKTFKMDQSSKTGVEAAVRSKLSKEMNLRSISPDESEPTQIVSGIQKSDLSRRAGGI

Samples

Sample ID Description Type Environment
1 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
25 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
42 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
43 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
46 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
47 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
48 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
49 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
54 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
55 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
56 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
60 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
61 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
62 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
63 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
64 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
65 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
66 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
67 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
68 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
69 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
70 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
71 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
79 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
80 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
81 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
82 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
83 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
84 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
85 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
86 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
92 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
93 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
97 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
100 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
101 2547132374 Acidovorax radicis N35 Isolate Unclassified
102 2643221570 Acidovorax sp. Root568 Isolate Unclassified
103 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
104 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
105 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.03
Metatranscriptomes 0
Isolates 2.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.49
Rhizoplane 0.99
Rhizosphere 80.69
Stem 0
Stem Tuber 0
Unclassified 3.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400489_32492 3300039093 Bacteria 5519
2 MBSR1b_contig_5056703 2162886012 Bacteria 4501
3 MBSR1b_contig_5345655 2162886012 Bacteria 7731
4 Ga0065715_10000254 3300005293 Bacteria 18403
5 Ga0070670_100017535 3300005331 Bacteria 6143
6 Ga0070666_10002302 3300005335 Bacteria 11553
7 Ga0068868_100005927 3300005338 Bacteria 8621
8 Ga0070673_100007089 3300005364 Bacteria 7360
9 Ga0070667_100005455 3300005367 Bacteria 10624
10 Ga0070713_100008456 3300005436 Bacteria 7300
11 Ga0070710_10036870 3300005437 Bacteria 2675
12 Ga0070711_100003883 3300005439 Bacteria 8776
13 Ga0070685_10004493 3300005466 Bacteria 7058
14 Ga0068863_100018894 3300005841 Bacteria 6595
15 Ga0068863_100078325 3300005841 Bacteria 3130
16 Ga0068858_100007626 3300005842 Bacteria 10453
17 Ga0068860_100011384 3300005843 Bacteria 8765
18 Ga0070716_100003621 3300006173 Bacteria 7302
19 Ga0070712_100007272 3300006175 Bacteria 6909
20 Ga0068871_100005889 3300006358 Bacteria 8619
21 Ga0075429_100001222 3300006880 Bacteria 20853
22 Ga0099824_1002241 3300006942 Bacteria 28219
23 Ga0105245_10006301 3300009098 Bacteria 10444
24 Ga0105242_10012902 3300009176 Bacteria 6440
25 Ga0105237_10028253 3300009545 Bacteria 5715
26 Ga0157378_10019367 3300013297 Bacteria 5983
27 Ga0163162_10037599 3300013306 Bacteria 4830
28 Ga0163163_10032654 3300014325 Bacteria 5029
29 Ga0157377_10009181 3300014745 Bacteria 4842
30 Ga0157379_10027975 3300014968 Bacteria 5018
31 Ga0207693_10008145 3300025915 Bacteria 8588
32 Ga0207663_10005258 3300025916 Bacteria 6518
33 Ga0207687_10000555 3300025927 Bacteria 25124
34 Ga0207700_10022747 3300025928 Bacteria 4306
35 Ga0207665_10027539 3300025939 Bacteria 3754
36 Ga0207711_10001016 3300025941 Bacteria 26906
37 Ga0207658_10026546 3300025986 Bacteria 4061
38 Ga0207677_10001691 3300026023 Bacteria 11665
39 Ga0207703_10033810 3300026035 Bacteria 4055
40 Ga0207702_10017147 3300026078 Bacteria 5991
41 Ga0207641_10008141 3300026088 Bacteria 8680
42 Ga0207676_10006336 3300026095 Bacteria 8357
43 Ga0207676_10024742 3300026095 Bacteria 4447
44 Ga0209281_1000373 3300027111 Bacteria 71724
45 Ga0209489_113087 3300027361 Bacteria 6985
46 Ga0209974_10010925 3300027876 Bacteria 3056
47 Ga0268264_10059219 3300028381 Bacteria 3208
48 Ga0265337_1000273 3300028556 Bacteria 28173
49 Ga0265319_1003599 3300028563 Bacteria 8020
50 Ga0265318_10010419 3300028577 Unclassified 4050
51 Ga0265323_10001814 3300028653 Bacteria 10138
52 Ga0265336_10006201 3300028666 Bacteria 4330
53 Ga0265338_10000002 3300028800 Bacteria 856588
54 Ga0265338_10000033 3300028800 Bacteria 251901
55 Ga0265338_10000859 3300028800 Bacteria 51384
56 Ga0265338_10011483 3300028800 Bacteria 10226
57 Ga0265332_10000008 3300031238 Bacteria 301609
58 Ga0265332_10000659 3300031238 Bacteria 22417
59 Ga0265320_10000238 3300031240 Bacteria 45232
60 Ga0265329_10001705 3300031242 Bacteria 10515
61 Ga0265339_10033059 3300031249 Bacteria 2915
62 Ga0265331_10000560 3300031250 Bacteria 33555
63 Ga0265327_10001220 3300031251 Bacteria 34600
64 Ga0265316_10000116 3300031344 Bacteria 86833
65 Ga0265316_10000928 3300031344 Bacteria 31870
66 Ga0265316_10002454 3300031344 Bacteria 19234
67 Ga0265316_10017388 3300031344 Bacteria 6219
68 Ga0265316_10032529 3300031344 Bacteria 4256
69 Ga0307408_100002162 3300031548 Bacteria 14068
70 Ga0316575_10000199 3300031665 Bacteria 15979
71 Ga0316579_10001857 3300031691 Bacteria 7822
72 Ga0316579_10002847 3300031691 Bacteria 6619
73 Ga0316579_10009758 3300031691 Bacteria 4041
74 Ga0265314_10000292 3300031711 Bacteria 71982
75 Ga0265314_10047161 3300031711 Bacteria 3034
76 Ga0265342_10000075 3300031712 Bacteria 106527
77 Ga0265342_10000985 3300031712 Bacteria 28059
78 Ga0265342_10004511 3300031712 Bacteria 10920
79 Ga0316576_10002358 3300031727 Bacteria 10744
80 Ga0316576_10009621 3300031727 Bacteria 6249
81 Ga0316576_10029364 3300031727 Bacteria 3886
82 Ga0316576_10030650 3300031727 Bacteria 3810
83 Ga0316576_10032743 3300031727 Bacteria 3696
84 Ga0316576_10034702 3300031727 Bacteria 3597
85 Ga0316578_10000425 3300031728 Bacteria 13851
86 Ga0316578_10000482 3300031728 Bacteria 13401
87 Ga0316578_10005174 3300031728 Bacteria 6289
88 Ga0316577_10003983 3300031733 Bacteria 7554
89 Ga0316577_10010664 3300031733 Bacteria 4966
90 Ga0316577_10011810 3300031733 Bacteria 4740
91 Ga0307406_10006131 3300031901 Bacteria 6609
92 Ga0316583_10003838 3300032133 Bacteria 5330
93 Ga0316583_10006347 3300032133 Bacteria 4243
94 Ga0316583_10007847 3300032133 Bacteria 3848
95 Ga0316585_10002981 3300032137 Bacteria 4623
96 Ga0316580_10000230 3300032139 Bacteria 11747
97 Ga0316580_10000327 3300032139 Bacteria 10453
98 Ga0373926_0008479 3300035083 Bacteria 3421
99 Ga0373953_0001883 3300035117 Bacteria 6217
100 Ga0316574_0003584 3300035398 Bacteria 8032
101 Ga0316574_0074686 3300035398 Bacteria 2146
102 Ga0373935_0019497 3300035692 Bacteria 4136
103 Ga0373927_0010527 3300035695 Bacteria 6166
104 Ga0373933_0054453 3300035724 Bacteria 2398
105 Ga0373947_0039754 3300035725 Bacteria 2800
106 Ga0373947_0046089 3300035725 Bacteria 2610
107 Ga0373937_0034393 3300036401 Bacteria 4610
108 Ga0373937_0035824 3300036401 Bacteria 4518
109 Ga0373937_0038329 3300036401 Bacteria 4367
110 Ga0316582_0000276 3300036647 Bacteria 17513
111 Ga0316582_0000652 3300036647 Bacteria 13569
112 Ga0316582_0000865 3300036647 Bacteria 12348
113 Ga0316582_0003777 3300036647 Bacteria 7515
114 Ga0316582_0010559 3300036647 Bacteria 5063
115 Ga0316582_0012469 3300036647 Unclassified 4747
116 Ga0316584_0000762 3300036712 Bacteria 17971
117 Ga0316584_0002380 3300036712 Bacteria 11870
118 Ga0316584_0004894 3300036712 Bacteria 8907
119 Ga0316584_0007700 3300036712 Bacteria 7389
120 Ga0316584_0013114 3300036712 Bacteria 5859
121 Ga0316584_0019199 3300036712 Archaea 4939
122 Ga0316584_0023126 3300036712 Bacteria 4539
123 Ga0316584_0058670 3300036712 Bacteria 2881
124 Ga0400484_34397 3300038725 Bacteria 17163
125 Ga0400484_44463 3300038725 Bacteria 4769
126 Ga0400490_03278 3300038726 Bacteria 79515
127 Ga0400490_19148 3300038726 Bacteria 12065
128 Ga0400490_31883 3300038726 Bacteria 86884
129 Ga0400490_34982 3300038726 Bacteria 12076
130 Ga0400490_55660 3300038726 Bacteria 22979
131 Ga0400491_13055 3300038727 Bacteria 3737
132 Ga0400491_22794 3300038727 Bacteria 8735
133 Ga0400485_07938 3300038735 Bacteria 36614
134 Ga0400485_16265 3300038735 Bacteria 7019
135 Ga0400486_06007 3300038742 Bacteria 36551
136 Ga0400486_24144 3300038742 Bacteria 114817
137 Ga0400483_086381 3300039062 Bacteria 22243
138 Ga0400483_103652 3300039062 Bacteria 3218
139 Ga0400483_116445 3300039062 Bacteria 78991
140 Ga0400483_181620 3300039062 Bacteria 15671
141 Ga0400483_239612 3300039062 Bacteria 10647
142 Ga0400483_288596 3300039062 Bacteria 17290
143 Ga0400489_10076 3300039093 Bacteria 9839
144 Ga0400489_35175 3300039093 Bacteria 12255
145 Ga0400489_58419 3300039093 Bacteria 11837
146 Ga0400489_74317 3300039093 Bacteria 24240
147 Ga0400489_84445 3300039093 Bacteria 134260
148 Ga0400489_87979 3300039093 Archaea 12021
149 Ga0400489_95328 3300039093 Bacteria 5923
150 Ga0400487_05177 3300039110 Bacteria 4604
151 Ga0400487_47448 3300039110 Unclassified 2325
152 Ga0451577_0000003 3300042876 Bacteria 921850
153 Ga0451577_0000019 3300042876 Bacteria 506976
154 Ga0451577_0006019 3300042876 Bacteria 12215
155 Ga0451577_0010327 3300042876 Bacteria 8940
156 Ga0451577_0028919 3300042876 Bacteria 5012
157 Ga0453683_0001453 3300044673 Bacteria 20458
158 Ga0453683_0006159 3300044673 Bacteria 8262
159 Ga0453683_0030548 3300044673 Bacteria 3405
160 Ga0453684_0000018 3300044712 Bacteria 921850
161 Ga0453684_0000042 3300044712 Bacteria 682980
162 Ga0453684_0000057 3300044712 Bacteria 506899
163 Ga0453684_0000108 3300044712 Bacteria 361085
164 Ga0453684_0000174 3300044712 Bacteria 284963
165 Ga0453684_0000777 3300044712 Bacteria 110019
166 Ga0453684_0013540 3300044712 Bacteria 13230
167 Ga0453684_0013910 3300044712 Bacteria 12980
168 Ga0453684_0023993 3300044712 Bacteria 8944
169 Ga0453684_0028781 3300044712 Bacteria 7912
170 Ga0453684_0031699 3300044712 Bacteria 7420
171 Ga0453684_0039001 3300044712 Bacteria 6480
172 Ga0453684_0039815 3300044712 Bacteria 6395
173 Ga0453684_0059135 3300044712 Archaea 4945
174 Ga0453684_0064315 3300044712 Bacteria 4687
175 Ga0453684_0068099 3300044712 Bacteria 4522
176 Ga0453684_0081342 3300044712 Unclassified 4041
177 Ga0451576_0000008 3300045051 Bacteria 746156
178 Ga0451576_0000048 3300045051 Unclassified 325145
179 Ga0451576_0000155 3300045051 Bacteria 175508
180 Ga0451576_0000243 3300045051 Bacteria 133634
181 Ga0451576_0000246 3300045051 Bacteria 132778
182 Ga0451576_0001059 3300045051 Bacteria 50699
183 Ga0451576_0003491 3300045051 Bacteria 21513
184 Ga0451576_0027186 3300045051 Bacteria 6146
185 Ga0451576_0049493 3300045051 Bacteria 4410
186 Ga0451576_0109568 3300045051 Unclassified 2873
187 Ga0451576_0113663 3300045051 Unclassified 2818
188 Ga0495639_0018332 3300046475 Bacteria 3046
189 Ga0495662_0020598 3300046476 Bacteria 3191
190 Ga0495664_0005571 3300046477 Bacteria 6922
191 Ga0495587_0028015 3300046536 Bacteria 3430
192 Ga0495645_0002619 3300046543 Bacteria 12239
193 Ga0495647_0008664 3300046681 Bacteria 3423
194 Ga0496105_0027048 3300048908 Bacteria 4682
195 Ga0496109_0109416 3300048912 Bacteria 2569
196 Ga0530510_0108982 3300061734 Bacteria 2027
197 2524003188 2523533628 Bacteria 4098242
198 2548500843 2547132374 Bacteria 5530232
199 2643864197 2643221570 Bacteria 5103772
200 2740992123 2740891818 Bacteria 6711283
201 2788435314 2786546940 Bacteria 6396474
202 2974321615 2974320154 Bacteria 4571377
203 Ga0400489_32492
204 MBSR1b_contig_5056703
205 MBSR1b_contig_5345655
206 Ga0065715_10000254
207 Ga0070670_100017535
208 Ga0070666_10002302
209 Ga0068868_100005927
210 Ga0070673_100007089
211 Ga0070667_100005455
212 Ga0070713_100008456
213 Ga0070710_10036870
214 Ga0070711_100003883
215 Ga0070685_10004493
216 Ga0068863_100018894
217 Ga0068863_100078325
218 Ga0068858_100007626
219 Ga0068860_100011384
220 Ga0070716_100003621
221 Ga0070712_100007272
222 Ga0068871_100005889
223 Ga0075429_100001222
224 Ga0099824_1002241
225 Ga0105245_10006301
226 Ga0105242_10012902
227 Ga0105237_10028253
228 Ga0157378_10019367
229 Ga0163162_10037599
230 Ga0163163_10032654
231 Ga0157377_10009181
232 Ga0157379_10027975
233 Ga0207693_10008145
234 Ga0207663_10005258
235 Ga0207687_10000555
236 Ga0207700_10022747
237 Ga0207665_10027539
238 Ga0207711_10001016
239 Ga0207658_10026546
240 Ga0207677_10001691
241 Ga0207703_10033810
242 Ga0207702_10017147
243 Ga0207641_10008141
244 Ga0207676_10006336
245 Ga0207676_10024742
246 Ga0209281_1000373
247 Ga0209489_113087
248 Ga0209974_10010925
249 Ga0268264_10059219
250 Ga0265337_1000273
251 Ga0265319_1003599
252 Ga0265318_10010419
253 Ga0265323_10001814
254 Ga0265336_10006201
255 Ga0265338_10000002
256 Ga0265338_10000033
257 Ga0265338_10000859
258 Ga0265338_10011483
259 Ga0265332_10000008
260 Ga0265332_10000659
261 Ga0265320_10000238
262 Ga0265329_10001705
263 Ga0265339_10033059
264 Ga0265331_10000560
265 Ga0265327_10001220
266 Ga0265316_10000116
267 Ga0265316_10000928
268 Ga0265316_10002454
269 Ga0265316_10017388
270 Ga0265316_10032529
271 Ga0307408_100002162
272 Ga0316575_10000199
273 Ga0316579_10001857
274 Ga0316579_10002847
275 Ga0316579_10009758
276 Ga0265314_10000292
277 Ga0265314_10047161
278 Ga0265342_10000075
279 Ga0265342_10000985
280 Ga0265342_10004511
281 Ga0316576_10002358
282 Ga0316576_10009621
283 Ga0316576_10029364
284 Ga0316576_10030650
285 Ga0316576_10032743
286 Ga0316576_10034702
287 Ga0316578_10000425
288 Ga0316578_10000482
289 Ga0316578_10005174
290 Ga0316577_10003983
291 Ga0316577_10010664
292 Ga0316577_10011810
293 Ga0307406_10006131
294 Ga0316583_10003838
295 Ga0316583_10006347
296 Ga0316583_10007847
297 Ga0316585_10002981
298 Ga0316580_10000230
299 Ga0316580_10000327
300 Ga0373926_0008479
301 Ga0373953_0001883
302 Ga0316574_0003584
303 Ga0316574_0074686
304 Ga0373935_0019497
305 Ga0373927_0010527
306 Ga0373933_0054453
307 Ga0373947_0039754
308 Ga0373947_0046089
309 Ga0373937_0034393
310 Ga0373937_0035824
311 Ga0373937_0038329
312 Ga0316582_0000276
313 Ga0316582_0000652
314 Ga0316582_0000865
315 Ga0316582_0003777
316 Ga0316582_0010559
317 Ga0316582_0012469
318 Ga0316584_0000762
319 Ga0316584_0002380
320 Ga0316584_0004894
321 Ga0316584_0007700
322 Ga0316584_0013114
323 Ga0316584_0019199
324 Ga0316584_0023126
325 Ga0316584_0058670
326 Ga0400484_34397
327 Ga0400484_44463
328 Ga0400490_03278
329 Ga0400490_19148
330 Ga0400490_31883
331 Ga0400490_34982
332 Ga0400490_55660
333 Ga0400491_13055
334 Ga0400491_22794
335 Ga0400485_07938
336 Ga0400485_16265
337 Ga0400486_06007
338 Ga0400486_24144
339 Ga0400483_086381
340 Ga0400483_103652
341 Ga0400483_116445
342 Ga0400483_181620
343 Ga0400483_239612
344 Ga0400483_288596
345 Ga0400489_10076
346 Ga0400489_35175
347 Ga0400489_58419
348 Ga0400489_74317
349 Ga0400489_84445
350 Ga0400489_87979
351 Ga0400489_95328
352 Ga0400487_05177
353 Ga0400487_47448
354 Ga0451577_0000003
355 Ga0451577_0000019
356 Ga0451577_0006019
357 Ga0451577_0010327
358 Ga0451577_0028919
359 Ga0453683_0001453
360 Ga0453683_0006159
361 Ga0453683_0030548
362 Ga0453684_0000018
363 Ga0453684_0000042
364 Ga0453684_0000057
365 Ga0453684_0000108
366 Ga0453684_0000174
367 Ga0453684_0000777
368 Ga0453684_0013540
369 Ga0453684_0013910
370 Ga0453684_0023993
371 Ga0453684_0028781
372 Ga0453684_0031699
373 Ga0453684_0039001
374 Ga0453684_0039815
375 Ga0453684_0059135
376 Ga0453684_0064315
377 Ga0453684_0068099
378 Ga0453684_0081342
379 Ga0451576_0000008
380 Ga0451576_0000048
381 Ga0451576_0000155
382 Ga0451576_0000243
383 Ga0451576_0000246
384 Ga0451576_0001059
385 Ga0451576_0003491
386 Ga0451576_0027186
387 Ga0451576_0049493
388 Ga0451576_0109568
389 Ga0451576_0113663
390 Ga0495639_0018332
391 Ga0495662_0020598
392 Ga0495664_0005571
393 Ga0495587_0028015
394 Ga0495645_0002619
395 Ga0495647_0008664
396 Ga0496105_0027048
397 Ga0496109_0109416
398 Ga0530510_0108982
399 2524003188
400 2548500843
401 2643864197
402 2740992123
403 2788435314
404 2974321615

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13597

NRDD

Anaerobic ribonucleoside-triphosphate reductase

119

693

0.97

PF03477

ATP-cone

ATP cone domain

3

93

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8p2s-assembly1.cif.gz_A cryo-em structure of the anaerobic ribonucleotide reductase from prevotella copri in its dimeric, atp/dttp/gtp-bound state 0.8125 138 649
8p39-assembly1.cif.gz_B cryo-em structure of the anaerobic ribonucleotide reductase from prevotella copri in its dimeric, dgtp/atp-bound state 0.812 111 706
1h78-assembly1.cif.gz_A-2 structural basis for allosteric substrate specificity regulation in class iii ribonucleotide reductases: nrdd in complex with dctp. 0.7986 139 690
1h78-assembly1.cif.gz_A-2 structural basis for allosteric substrate specificity regulation in class iii ribonucleotide reductases: nrdd in complex with dctp. 0.7915 139 690
4com-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7867 139 688
ID Description Score Start End Superfamily
af_P9WH77_21_107_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9182 17 105 1.10.10.10
af_P28903_3_90_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.892 17 105 1.10.10.10
af_P9WH77_21_107_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8886 17 105 1.10.10.10
af_P28903_3_90_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8638 17 105 1.10.10.10
af_Q58242_668_1058_3.20.70.20 Alpha Beta;Alpha-Beta Barrel;Anaerobic Ribonucleotide-triphosphate Reductase Large Chain; 0.8462 280 551 3.20.70.20
ID Description Score Start End GO Terms
AF-A0A496TFZ8-F1-model_v4 Ribonucleoside triphosphate reductase (EC 1.17.4.2) 0.9868 14 94 GO:0004748
GO:0005524
GO:0008998
GO:0009265
GO:0031250
AF-A0A661QGE6-F1-model_v4 Ribonucleoside triphosphate reductase (EC 1.17.4.2) 0.9777 452 706 GO:0004748
GO:0006260
GO:0008998
GO:0009265
GO:0031250
AF-A0A7V1URL6-F1-model_v4 deleted 0.9768 581 708
AF-A0A1V5NAF4-F1-model_v4 Anaerobic ribonucleoside triphosphate reductase 0.9749 581 713 GO:0004748
GO:0006260
GO:0008998
GO:0009265
GO:0031250
AF-A0A645F473-F1-model_v4 Uncharacterized protein 0.9734 589 708 GO:0004748
GO:0006260
GO:0008998
GO:0009265
GO:0031250

Map