F310208
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 202 | 149 | 197 | 386 |
Family's Representative Sequence
| Representative Sequence | 3300044673|Ga0453683_0162110|Ga0453683_0162110_13_1281 |
| Length | 422 |
| Sequence | MTKARTVVFMGSYYRSMSATLHDFARHEPLSEEPWDAARAHDVIHELVADIEDAIEPGCTWPWHALDTRDPTRPRHRSLYLGAAGVLWALWYLESEGAARLRVKPAELFQRLYPSYLQEPDTGEVVPSYLLGEVGILLPLWRMTGARDAPERLASAIDRNIPNPTNEALWGGSGTMLGALHMRHWTGDGEWEVLFRRNAEHLWRTWVRDEALRCYVWIQDLYGEVAALLGPAHGFAGNAYALLRGADLLSEERREVLLDRCAETLSATAVEQGDCANWRPTAAPPESGGDSKMLVQWCHGAPGMVTALAEVPVGRSPALDALLVKGGNLTWEAGPLAKGFGVCHGTAGNGYAFLKLHARTGDPVWLERARSFAMHSIGQAEAMREQYGRRRYSLWTGDPGLAIYLWHCIAGAGDVPSLDFFD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2501025502 | Paraburkholderia unamae MTI-641 | Isolate | Rhizosphere |
| 2 | 2508501114 | Microvirga lotononidis WSM3557 | Isolate | Nodule |
| 3 | 2510917013 | Paraburkholderia unamae MTI-641 | Isolate | Rhizosphere |
| 4 | 2585428062 | Methylibium sp. CF059 | Isolate | Rhizosphere |
| 5 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 6 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 10 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 13 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 14 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 25 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 30 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 31 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 33 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 34 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 35 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 36 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 37 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 38 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 39 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 40 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 41 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 43 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 44 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 45 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 46 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 47 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 88 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 89 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 90 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 91 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 92 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 93 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 94 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 95 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 96 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 97 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 98 | 3300041459 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG | Metagenome | Rhizoplane |
| 99 | 3300041491 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG | Metagenome | Unclassified |
| 100 | 3300041498 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG | Metagenome | Unclassified |
| 101 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 102 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 103 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 104 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 105 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 106 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 107 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 108 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 109 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 110 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 111 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 112 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 113 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 114 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 115 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 135 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 136 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 137 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 138 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 139 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 140 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 141 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 142 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 143 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 144 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 148 | 3300053739 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere | Metagenome | Endosphere |
| 149 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.52 |
| Metatranscriptomes | 0 |
| Isolates | 2.48 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.98 |
| Nodule | 0.99 |
| Rhizoplane | 7.43 |
| Rhizosphere | 84.16 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 5.45 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25153J46596_10001933 | 3300003215 | Bacteria | 12312 |
| 2 | rootL2_10309726 | 3300003322 | Unclassified | 2868 |
| 3 | Ga0070658_10083425 | 3300005327 | Bacteria | 2627 |
| 4 | Ga0070670_100021437 | 3300005331 | Bacteria | 5559 |
| 5 | Ga0068869_100007694 | 3300005334 | Bacteria | 6902 |
| 6 | Ga0068869_100032667 | 3300005334 | Bacteria | 3669 |
| 7 | Ga0070666_10006431 | 3300005335 | Bacteria | 7221 |
| 8 | Ga0070680_100048837 | 3300005336 | Bacteria | 3449 |
| 9 | Ga0068868_100202649 | 3300005338 | Bacteria | 1655 |
| 10 | Ga0070689_100183407 | 3300005340 | Unclassified | 1701 |
| 11 | Ga0070691_10037644 | 3300005341 | Bacteria | 2283 |
| 12 | Ga0070661_100025195 | 3300005344 | Bacteria | 4274 |
| 13 | Ga0070669_100006600 | 3300005353 | Bacteria | 8352 |
| 14 | Ga0070669_100039436 | 3300005353 | Bacteria | 3432 |
| 15 | Ga0070675_100013758 | 3300005354 | Bacteria | 6367 |
| 16 | Ga0070667_100042734 | 3300005367 | Unclassified | 3803 |
| 17 | Ga0070714_100207089 | 3300005435 | Bacteria | 1796 |
| 18 | Ga0070705_100129070 | 3300005440 | Bacteria | 1646 |
| 19 | Ga0070700_100029251 | 3300005441 | Bacteria | 3284 |
| 20 | Ga0070694_100206914 | 3300005444 | Bacteria | 1465 |
| 21 | Ga0070678_100230946 | 3300005456 | Unclassified | 1542 |
| 22 | Ga0068867_100010823 | 3300005459 | Bacteria | 6434 |
| 23 | Ga0070707_100001421 | 3300005468 | Bacteria | 23463 |
| 24 | Ga0070707_100319803 | 3300005468 | Unclassified | 1508 |
| 25 | Ga0070698_100010391 | 3300005471 | Bacteria | 9941 |
| 26 | Ga0070693_100164457 | 3300005547 | Bacteria | 1416 |
| 27 | Ga0070665_100013255 | 3300005548 | Bacteria | 8302 |
| 28 | Ga0070704_100078747 | 3300005549 | Bacteria | 2419 |
| 29 | Ga0068855_100038283 | 3300005563 | Bacteria | 5698 |
| 30 | Ga0070664_100037218 | 3300005564 | Bacteria | 4090 |
| 31 | Ga0070664_100074488 | 3300005564 | Bacteria | 2914 |
| 32 | Ga0068856_100210848 | 3300005614 | Bacteria | 1958 |
| 33 | Ga0068852_100137128 | 3300005616 | Bacteria | 2260 |
| 34 | Ga0068852_100274739 | 3300005616 | Bacteria | 1622 |
| 35 | Ga0068859_100005475 | 3300005617 | Bacteria | 12919 |
| 36 | Ga0068864_100018419 | 3300005618 | Bacteria | 5834 |
| 37 | Ga0068864_100031798 | 3300005618 | Bacteria | 4479 |
| 38 | Ga0068864_100246318 | 3300005618 | Bacteria | 1658 |
| 39 | Ga0068870_10038482 | 3300005840 | Bacteria | 2470 |
| 40 | Ga0068863_100078146 | 3300005841 | Unclassified | 3133 |
| 41 | Ga0068863_100223797 | 3300005841 | Bacteria | 1813 |
| 42 | Ga0068858_100007533 | 3300005842 | Bacteria | 10521 |
| 43 | Ga0068858_100056406 | 3300005842 | Bacteria | 3631 |
| 44 | Ga0068860_100308511 | 3300005843 | Bacteria | 1551 |
| 45 | Ga0081539_10001147 | 3300005985 | Bacteria | 47975 |
| 46 | Ga0097621_100029113 | 3300006237 | Bacteria | 4359 |
| 47 | Ga0068871_100011051 | 3300006358 | Bacteria | 6618 |
| 48 | Ga0068871_100015432 | 3300006358 | Bacteria | 5717 |
| 49 | Ga0075428_100014376 | 3300006844 | Bacteria | 8797 |
| 50 | Ga0075431_100006213 | 3300006847 | Bacteria | 11863 |
| 51 | Ga0075434_100004265 | 3300006871 | Bacteria | 12826 |
| 52 | Ga0075429_100000683 | 3300006880 | Bacteria | 26402 |
| 53 | Ga0097620_100005475 | 3300006931 | Bacteria | 12919 |
| 54 | Ga0105240_10040410 | 3300009093 | Bacteria | 5966 |
| 55 | Ga0105245_10070086 | 3300009098 | Bacteria | 3181 |
| 56 | Ga0114129_10010899 | 3300009147 | Bacteria | 12950 |
| 57 | Ga0105243_10126319 | 3300009148 | Unclassified | 2164 |
| 58 | Ga0105237_10167437 | 3300009545 | Bacteria | 2197 |
| 59 | Ga0105237_10290501 | 3300009545 | Unclassified | 1638 |
| 60 | Ga0105249_10128452 | 3300009553 | Bacteria | 2417 |
| 61 | Ga0105249_10186218 | 3300009553 | Bacteria | 2023 |
| 62 | Ga0105249_10246299 | 3300009553 | Bacteria | 1770 |
| 63 | Ga0157369_10091269 | 3300013105 | Bacteria | 3252 |
| 64 | Ga0163162_10246220 | 3300013306 | Bacteria | 1919 |
| 65 | Ga0157375_10206766 | 3300013308 | Bacteria | 2119 |
| 66 | Ga0157376_10019054 | 3300014969 | Bacteria | 5278 |
| 67 | Ga0157376_10137112 | 3300014969 | Bacteria | 2191 |
| 68 | Ga0163161_10060986 | 3300017792 | Bacteria | 2746 |
| 69 | Ga0209758_1000280 | 3300025297 | Bacteria | 101103 |
| 70 | Ga0207645_10001566 | 3300025907 | Bacteria | 18680 |
| 71 | Ga0207643_10041624 | 3300025908 | Bacteria | 2589 |
| 72 | Ga0207684_10311732 | 3300025910 | Bacteria | 1356 |
| 73 | Ga0207707_10028679 | 3300025912 | Bacteria | 4864 |
| 74 | Ga0207671_10098028 | 3300025914 | Bacteria | 2217 |
| 75 | Ga0207660_10042063 | 3300025917 | Bacteria | 3206 |
| 76 | Ga0207657_10001172 | 3300025919 | Bacteria | 27807 |
| 77 | Ga0207646_10273186 | 3300025922 | Unclassified | 1528 |
| 78 | Ga0207659_10083486 | 3300025926 | Bacteria | 2368 |
| 79 | Ga0207664_10093266 | 3300025929 | Bacteria | 2472 |
| 80 | Ga0207644_10045418 | 3300025931 | Bacteria | 3125 |
| 81 | Ga0207670_10026174 | 3300025936 | Bacteria | 3674 |
| 82 | Ga0207670_10138883 | 3300025936 | Unclassified | 1790 |
| 83 | Ga0207691_10000022 | 3300025940 | Bacteria | 132936 |
| 84 | Ga0207689_10011258 | 3300025942 | Bacteria | 7676 |
| 85 | Ga0207689_10078090 | 3300025942 | Bacteria | 2720 |
| 86 | Ga0207661_10307486 | 3300025944 | Bacteria | 1422 |
| 87 | Ga0207679_10020593 | 3300025945 | Bacteria | 4453 |
| 88 | Ga0207679_10023243 | 3300025945 | Bacteria | 4235 |
| 89 | Ga0207651_10008537 | 3300025960 | Bacteria | 5539 |
| 90 | Ga0207651_10062950 | 3300025960 | Bacteria | 2588 |
| 91 | Ga0207712_10107672 | 3300025961 | Unclassified | 2085 |
| 92 | Ga0207668_10003779 | 3300025972 | Bacteria | 8919 |
| 93 | Ga0207658_10098312 | 3300025986 | Unclassified | 2287 |
| 94 | Ga0207648_10017870 | 3300026089 | Bacteria | 6435 |
| 95 | Ga0207648_10041899 | 3300026089 | Bacteria | 4020 |
| 96 | Ga0207676_10056683 | 3300026095 | Bacteria | 3082 |
| 97 | Ga0207675_100016851 | 3300026118 | Bacteria | 6826 |
| 98 | Ga0207683_10000283 | 3300026121 | Bacteria | 45381 |
| 99 | Ga0207683_10155570 | 3300026121 | Unclassified | 2065 |
| 100 | Ga0207698_10254363 | 3300026142 | Bacteria | 1610 |
| 101 | Ga0268266_10007335 | 3300028379 | Bacteria | 9961 |
| 102 | Ga0268264_10278929 | 3300028381 | Bacteria | 1564 |
| 103 | Ga0307515_10000138 | 3300028794 | Bacteria | 173220 |
| 104 | Ga0307515_10019979 | 3300028794 | Bacteria | 11997 |
| 105 | Ga0307512_10027057 | 3300030522 | Bacteria | 5056 |
| 106 | Ga0307513_10222292 | 3300031456 | Unclassified | 1708 |
| 107 | Ga0307513_10227567 | 3300031456 | Bacteria | 1680 |
| 108 | Ga0307508_10000509 | 3300031616 | Bacteria | 46521 |
| 109 | Ga0307514_10005578 | 3300031649 | Bacteria | 11158 |
| 110 | Ga0307516_10007967 | 3300031730 | Bacteria | 12059 |
| 111 | Ga0307412_10010266 | 3300031911 | Bacteria | 5391 |
| 112 | Ga0316574_0154984 | 3300035398 | Unclassified | 1476 |
| 113 | Ga0316582_0080781 | 3300036647 | Unclassified | 2123 |
| 114 | Ga0395898_0025687 | 3300037466 | Bacteria | 5932 |
| 115 | Ga0395901_0205215 | 3300038443 | Bacteria | 2065 |
| 116 | Ga0451800_1025443 | 3300041459 | Bacteria | 1539 |
| 117 | Ga0451833_1011589 | 3300041491 | Bacteria | 1687 |
| 118 | Ga0451841_0226543 | 3300041498 | Bacteria | 2457 |
| 119 | Ga0451577_0080414 | 3300042876 | Bacteria | 2906 |
| 120 | Ga0451577_0199544 | 3300042876 | Bacteria | 1806 |
| 121 | Ga0466969_0004796 | 3300044656 | Bacteria | 7203 |
| 122 | Ga0466972_0028398 | 3300044658 | Bacteria | 2760 |
| 123 | Ga0453683_0162110 | 3300044673 | Bacteria | 1415 |
| 124 | Ga0466961_0048173 | 3300044693 | Bacteria | 2724 |
| 125 | Ga0466961_0056641 | 3300044693 | Bacteria | 2498 |
| 126 | Ga0466963_0000118 | 3300044694 | Bacteria | 29387 |
| 127 | Ga0466963_0000185 | 3300044694 | Bacteria | 26033 |
| 128 | Ga0466963_0006819 | 3300044694 | Bacteria | 6794 |
| 129 | Ga0466963_0038417 | 3300044694 | Bacteria | 3129 |
| 130 | Ga0466963_0046484 | 3300044694 | Bacteria | 2862 |
| 131 | Ga0466963_0049605 | 3300044694 | Bacteria | 2776 |
| 132 | Ga0466964_0024786 | 3300044706 | Bacteria | 2338 |
| 133 | Ga0466964_0046882 | 3300044706 | Unclassified | 1762 |
| 134 | Ga0466971_0006368 | 3300044719 | Bacteria | 5125 |
| 135 | Ga0466971_0016290 | 3300044719 | Bacteria | 3278 |
| 136 | Ga0466971_0080574 | 3300044719 | Bacteria | 1484 |
| 137 | Ga0466968_0001925 | 3300044735 | Bacteria | 7512 |
| 138 | Ga0466968_0015958 | 3300044735 | Unclassified | 2985 |
| 139 | Ga0466968_0091527 | 3300044735 | Bacteria | 1348 |
| 140 | Ga0466957_0005853 | 3300044842 | Bacteria | 6923 |
| 141 | Ga0466957_0021927 | 3300044842 | Bacteria | 3767 |
| 142 | Ga0466957_0103788 | 3300044842 | Unclassified | 1795 |
| 143 | Ga0466960_0032330 | 3300044901 | Bacteria | 2421 |
| 144 | Ga0466960_0067483 | 3300044901 | Bacteria | 1772 |
| 145 | Ga0466959_0015517 | 3300045049 | Bacteria | 5551 |
| 146 | Ga0466959_0056559 | 3300045049 | Bacteria | 2862 |
| 147 | Ga0466958_0005305 | 3300045836 | Bacteria | 6916 |
| 148 | Ga0466958_0018945 | 3300045836 | Bacteria | 4001 |
| 149 | Ga0466958_0048117 | 3300045836 | Bacteria | 2575 |
| 150 | Ga0466958_0121940 | 3300045836 | Bacteria | 1632 |
| 151 | Ga0466967_0002040 | 3300045976 | Bacteria | 12328 |
| 152 | Ga0466967_0007598 | 3300045976 | Bacteria | 7838 |
| 153 | Ga0466967_0032476 | 3300045976 | Bacteria | 4408 |
| 154 | Ga0466967_0051423 | 3300045976 | Bacteria | 3611 |
| 155 | Ga0466967_0162820 | 3300045976 | Bacteria | 2095 |
| 156 | Ga0495592_0061061 | 3300046454 | Bacteria | 2771 |
| 157 | Ga0495629_0197511 | 3300046459 | Bacteria | 1391 |
| 158 | Ga0495629_0216471 | 3300046459 | Unclassified | 1322 |
| 159 | Ga0495607_0098582 | 3300046501 | Bacteria | 1569 |
| 160 | Ga0495608_0018372 | 3300046511 | Bacteria | 4823 |
| 161 | Ga0495610_0032078 | 3300046512 | Bacteria | 2734 |
| 162 | Ga0495628_0165593 | 3300046516 | Bacteria | 1678 |
| 163 | Ga0495630_0058345 | 3300046517 | Bacteria | 2893 |
| 164 | Ga0495630_0151573 | 3300046517 | Bacteria | 1764 |
| 165 | Ga0495643_0046175 | 3300046522 | Bacteria | 2362 |
| 166 | Ga0495586_0020616 | 3300046535 | Bacteria | 3510 |
| 167 | Ga0495667_0019905 | 3300046559 | Bacteria | 4528 |
| 168 | Ga0495625_0012687 | 3300046660 | Bacteria | 6815 |
| 169 | Ga0495657_0006118 | 3300046675 | Bacteria | 9431 |
| 170 | Ga0495599_0107697 | 3300046678 | Bacteria | 1736 |
| 171 | Ga0495624_0070493 | 3300046690 | Bacteria | 2176 |
| 172 | Ga0495600_0010552 | 3300046809 | Bacteria | 5737 |
| 173 | Ga0495674_0034099 | 3300047319 | Bacteria | 4606 |
| 174 | Ga0495676_0149719 | 3300047321 | Bacteria | 1663 |
| 175 | Ga0495680_0054982 | 3300047322 | Bacteria | 3088 |
| 176 | Ga0495684_0080571 | 3300047471 | Bacteria | 2471 |
| 177 | Ga0496100_0169249 | 3300048903 | Bacteria | 1572 |
| 178 | Ga0496102_0027175 | 3300048905 | Bacteria | 5111 |
| 179 | Ga0496102_0143454 | 3300048905 | Bacteria | 2240 |
| 180 | Ga0496105_0004870 | 3300048908 | Bacteria | 10138 |
| 181 | Ga0496106_0135792 | 3300048909 | Bacteria | 1932 |
| 182 | Ga0496108_0030803 | 3300048911 | Bacteria | 4445 |
| 183 | Ga0496108_0125692 | 3300048911 | Bacteria | 2201 |
| 184 | Ga0496109_0014073 | 3300048912 | Bacteria | 6955 |
| 185 | Ga0496109_0192148 | 3300048912 | Bacteria | 1918 |
| 186 | Ga0496109_0245635 | 3300048912 | Unclassified | 1685 |
| 187 | Ga0496113_0081000 | 3300048916 | Unclassified | 2488 |
| 188 | Ga0496114_0072952 | 3300048917 | Bacteria | 2888 |
| 189 | Ga0496114_0291260 | 3300048917 | Unclassified | 1440 |
| 190 | Ga0496115_0012420 | 3300048918 | Bacteria | 6409 |
| 191 | nmdc:mga05p37_1613_c1 | 3300050507 | Bacteria | 26137 |
| 192 | nmdc:mga09592_58_c1 | 3300050508 | Bacteria | 61599 |
| 193 | Ga0495595_0144496 | 3300053084 | Unclassified | 1168 |
| 194 | Ga0495619_0041420 | 3300053085 | Bacteria | 3012 |
| 195 | Ga0500658_0017281 | 3300053134 | Bacteria | 2693 |
| 196 | Ga0500587_001874 | 3300053739 | Bacteria | 3000 |
| 197 | Ga0466962_0043785 | 3300061719 | Bacteria | 2141 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046516 | Ga0495628_0165593 | Ga0495628_0165593_667_1626 | 306 |
| 2 | 3300005985 | Ga0081539_10001147 | Ga0081539_1000114714 | 346 |
| 3 | 3300044694 | Ga0466963_0000118 | Ga0466963_0000118_13268_14380 | 353 |
| 4 | 3300045836 | Ga0466958_0018945 | Ga0466958_0018945_1191_2303 | 353 |
| 5 | 3300045976 | Ga0466967_0002040 | Ga0466967_0002040_6384_7496 | 353 |
| 6 | 3300048908 | Ga0496105_0004870 | Ga0496105_0004870_6444_7568 | 353 |
| 7 | 3300048911 | Ga0496108_0125692 | Ga0496108_0125692_470_1594 | 353 |
| 8 | 3300048912 | Ga0496109_0014073 | Ga0496109_0014073_52_1176 | 353 |
| 9 | 3300048916 | Ga0496113_0081000 | Ga0496113_0081000_108_1232 | 353 |
| 10 | 3300048917 | Ga0496114_0072952 | Ga0496114_0072952_287_1411 | 353 |
| 11 | 3300025929 | Ga0207664_10093266 | Ga0207664_100932662 | 357 |
| 12 | 3300009093 | Ga0105240_10040410 | Ga0105240_100404102 | 358 |
| 13 | 3300009545 | Ga0105237_10167437 | Ga0105237_101674373 | 358 |
| 14 | 3300025914 | Ga0207671_10098028 | Ga0207671_100980283 | 358 |
| 15 | 3300044694 | Ga0466963_0046484 | Ga0466963_0046484_60_1169 | 358 |
| 16 | 3300044706 | Ga0466964_0024786 | Ga0466964_0024786_1022_2128 | 358 |
| 17 | 3300044719 | Ga0466971_0080574 | Ga0466971_0080574_64_1170 | 358 |
| 18 | 3300044842 | Ga0466957_0021927 | Ga0466957_0021927_43_1149 | 358 |
| 19 | 3300044901 | Ga0466960_0067483 | Ga0466960_0067483_360_1466 | 358 |
| 20 | 3300045976 | Ga0466967_0007598 | Ga0466967_0007598_2165_3271 | 358 |
| 21 | 3300048905 | Ga0496102_0143454 | Ga0496102_0143454_127_1236 | 358 |
| 22 | 3300005338 | Ga0068868_100202649 | Ga0068868_1002026492 | 359 |
| 23 | 3300005344 | Ga0070661_100025195 | Ga0070661_1000251952 | 359 |
| 24 | 3300005547 | Ga0070693_100164457 | Ga0070693_1001644571 | 359 |
| 25 | 3300005563 | Ga0068855_100038283 | Ga0068855_1000382835 | 359 |
| 26 | 3300005564 | Ga0070664_100037218 | Ga0070664_1000372182 | 359 |
| 27 | 3300006871 | Ga0075434_100004265 | Ga0075434_1000042657 | 359 |
| 28 | 3300009098 | Ga0105245_10070086 | Ga0105245_100700862 | 359 |
| 29 | 3300009545 | Ga0105237_10290501 | Ga0105237_102905012 | 359 |
| 30 | 3300013105 | Ga0157369_10091269 | Ga0157369_100912693 | 359 |
| 31 | 3300013306 | Ga0163162_10246220 | Ga0163162_102462202 | 359 |
| 32 | 3300025919 | Ga0207657_10001172 | Ga0207657_1000117216 | 359 |
| 33 | 3300025944 | Ga0207661_10307486 | Ga0207661_103074862 | 359 |
| 34 | 3300025945 | Ga0207679_10023243 | Ga0207679_100232433 | 359 |
| 35 | 3300037466 | Ga0395898_0025687 | Ga0395898_0025687_3427_4539 | 359 |
| 36 | 3300038443 | Ga0395901_0205215 | Ga0395901_0205215_273_1385 | 359 |
| 37 | 3300044656 | Ga0466969_0004796 | Ga0466969_0004796_4687_5799 | 359 |
| 38 | 3300044693 | Ga0466961_0048173 | Ga0466961_0048173_744_1856 | 359 |
| 39 | 3300044693 | Ga0466961_0056641 | Ga0466961_0056641_209_1321 | 359 |
| 40 | 3300044694 | Ga0466963_0000185 | Ga0466963_0000185_3897_5009 | 359 |
| 41 | 3300044694 | Ga0466963_0006819 | Ga0466963_0006819_5314_6426 | 359 |
| 42 | 3300044694 | Ga0466963_0038417 | Ga0466963_0038417_1271_2383 | 359 |
| 43 | 3300044694 | Ga0466963_0049605 | Ga0466963_0049605_973_2085 | 359 |
| 44 | 3300044706 | Ga0466964_0046882 | Ga0466964_0046882_98_1210 | 359 |
| 45 | 3300044719 | Ga0466971_0006368 | Ga0466971_0006368_3057_4169 | 359 |
| 46 | 3300044719 | Ga0466971_0016290 | Ga0466971_0016290_798_1910 | 359 |
| 47 | 3300044735 | Ga0466968_0001925 | Ga0466968_0001925_6383_7495 | 359 |
| 48 | 3300044735 | Ga0466968_0015958 | Ga0466968_0015958_19_1131 | 359 |
| 49 | 3300044735 | Ga0466968_0091527 | Ga0466968_0091527_19_1137 | 359 |
| 50 | 3300044842 | Ga0466957_0005853 | Ga0466957_0005853_3862_4974 | 359 |
| 51 | 3300044842 | Ga0466957_0103788 | Ga0466957_0103788_539_1651 | 359 |
| 52 | 3300044901 | Ga0466960_0032330 | Ga0466960_0032330_816_1928 | 359 |
| 53 | 3300045049 | Ga0466959_0015517 | Ga0466959_0015517_258_1370 | 359 |
| 54 | 3300045049 | Ga0466959_0056559 | Ga0466959_0056559_1175_2287 | 359 |
| 55 | 3300045836 | Ga0466958_0005305 | Ga0466958_0005305_764_1876 | 359 |
| 56 | 3300045836 | Ga0466958_0048117 | Ga0466958_0048117_47_1156 | 359 |
| 57 | 3300045836 | Ga0466958_0121940 | Ga0466958_0121940_433_1545 | 359 |
| 58 | 3300045976 | Ga0466967_0032476 | Ga0466967_0032476_1858_2970 | 359 |
| 59 | 3300045976 | Ga0466967_0051423 | Ga0466967_0051423_842_1954 | 359 |
| 60 | 3300045976 | Ga0466967_0162820 | Ga0466967_0162820_586_1698 | 359 |
| 61 | 3300046501 | Ga0495607_0098582 | Ga0495607_0098582_108_1223 | 359 |
| 62 | 3300046517 | Ga0495630_0151573 | Ga0495630_0151573_443_1555 | 359 |
| 63 | 3300048903 | Ga0496100_0169249 | Ga0496100_0169249_423_1535 | 359 |
| 64 | 3300048905 | Ga0496102_0027175 | Ga0496102_0027175_788_1900 | 359 |
| 65 | 3300048909 | Ga0496106_0135792 | Ga0496106_0135792_259_1371 | 359 |
| 66 | 3300048911 | Ga0496108_0030803 | Ga0496108_0030803_580_1692 | 359 |
| 67 | 3300048912 | Ga0496109_0192148 | Ga0496109_0192148_782_1894 | 359 |
| 68 | 3300053084 | Ga0495595_0144496 | Ga0495595_0144496_23_1135 | 359 |
| 69 | 3300061719 | Ga0466962_0043785 | Ga0466962_0043785_88_1200 | 359 |
| 70 | 3300005336 | Ga0070680_100048837 | Ga0070680_1000488372 | 361 |
| 71 | 3300005341 | Ga0070691_10037644 | Ga0070691_100376442 | 361 |
| 72 | 3300005435 | Ga0070714_100207089 | Ga0070714_1002070892 | 361 |
| 73 | 3300005468 | Ga0070707_100001421 | Ga0070707_1000014215 | 361 |
| 74 | 3300025912 | Ga0207707_10028679 | Ga0207707_100286792 | 361 |
| 75 | 3300025917 | Ga0207660_10042063 | Ga0207660_100420632 | 361 |
| 76 | 3300046454 | Ga0495592_0061061 | Ga0495592_0061061_750_1874 | 361 |
| 77 | 3300046459 | Ga0495629_0197511 | Ga0495629_0197511_168_1292 | 361 |
| 78 | 3300046459 | Ga0495629_0216471 | Ga0495629_0216471_24_1148 | 361 |
| 79 | 3300046511 | Ga0495608_0018372 | Ga0495608_0018372_1202_2326 | 361 |
| 80 | 3300046517 | Ga0495630_0058345 | Ga0495630_0058345_66_1190 | 361 |
| 81 | 3300046535 | Ga0495586_0020616 | Ga0495586_0020616_575_1699 | 361 |
| 82 | 3300046559 | Ga0495667_0019905 | Ga0495667_0019905_3001_4125 | 361 |
| 83 | 3300046675 | Ga0495657_0006118 | Ga0495657_0006118_4911_6035 | 361 |
| 84 | 3300046678 | Ga0495599_0107697 | Ga0495599_0107697_192_1316 | 361 |
| 85 | 3300046690 | Ga0495624_0070493 | Ga0495624_0070493_587_1711 | 361 |
| 86 | 3300046809 | Ga0495600_0010552 | Ga0495600_0010552_3249_4373 | 361 |
| 87 | 3300047319 | Ga0495674_0034099 | Ga0495674_0034099_10_1134 | 361 |
| 88 | 3300047321 | Ga0495676_0149719 | Ga0495676_0149719_310_1434 | 361 |
| 89 | 3300047322 | Ga0495680_0054982 | Ga0495680_0054982_1355_2479 | 361 |
| 90 | 3300047471 | Ga0495684_0080571 | Ga0495684_0080571_309_1433 | 361 |
| 91 | 3300048917 | Ga0496114_0291260 | Ga0496114_0291260_58_1182 | 361 |
| 92 | 3300048918 | Ga0496115_0012420 | Ga0496115_0012420_3034_4158 | 361 |
| 93 | 3300053085 | Ga0495619_0041420 | Ga0495619_0041420_1547_2671 | 361 |
| 94 | 3300005842 | Ga0068858_100056406 | Ga0068858_1000564063 | 376 |
| 95 | 3300005331 | Ga0070670_100021437 | Ga0070670_1000214373 | 379 |
| 96 | 3300005471 | Ga0070698_100010391 | Ga0070698_1000103912 | 384 |
| 97 | 3300006844 | Ga0075428_100014376 | Ga0075428_1000143762 | 384 |
| 98 | 3300006847 | Ga0075431_100006213 | Ga0075431_1000062133 | 384 |
| 99 | 3300006880 | Ga0075429_100000683 | Ga0075429_10000068324 | 384 |
| 100 | 3300009147 | Ga0114129_10010899 | Ga0114129_1001089910 | 384 |
| 101 | 3300050507 | nmdc:mga05p37_1613_c1 | nmdc:mga05p37_1613_c1_2959_4167 | 384 |
| 102 | 3300050508 | nmdc:mga09592_58_c1 | nmdc:mga09592_58_c1_57855_59063 | 384 |
| 103 | 3300005616 | Ga0068852_100137128 | Ga0068852_1001371282 | 386 |
| 104 | 3300025910 | Ga0207684_10311732 | Ga0207684_103117322 | 386 |
| 105 | 3300005616 | Ga0068852_100274739 | Ga0068852_1002747392 | 387 |
| 106 | 3300026142 | Ga0207698_10254363 | Ga0207698_102543632 | 387 |
| 107 | 3300005440 | Ga0070705_100129070 | Ga0070705_1001290702 | 388 |
| 108 | 3300005444 | Ga0070694_100206914 | Ga0070694_1002069141 | 388 |
| 109 | 3300005564 | Ga0070664_100074488 | Ga0070664_1000744883 | 389 |
| 110 | 3300005614 | Ga0068856_100210848 | Ga0068856_1002108482 | 389 |
| 111 | 3300005618 | Ga0068864_100031798 | Ga0068864_1000317982 | 389 |
| 112 | 3300025945 | Ga0207679_10020593 | Ga0207679_100205934 | 389 |
| 113 | 3300026095 | Ga0207676_10056683 | Ga0207676_100566832 | 389 |
| 114 | 3300005334 | Ga0068869_100007694 | Ga0068869_1000076945 | 390 |
| 115 | 3300005335 | Ga0070666_10006431 | Ga0070666_100064312 | 390 |
| 116 | 3300005353 | Ga0070669_100006600 | Ga0070669_1000066006 | 390 |
| 117 | 3300005354 | Ga0070675_100013758 | Ga0070675_1000137585 | 390 |
| 118 | 3300005459 | Ga0068867_100010823 | Ga0068867_1000108234 | 390 |
| 119 | 3300005618 | Ga0068864_100018419 | Ga0068864_1000184193 | 390 |
| 120 | 3300005841 | Ga0068863_100223797 | Ga0068863_1002237972 | 390 |
| 121 | 3300005842 | Ga0068858_100007533 | Ga0068858_1000075331 | 390 |
| 122 | 3300005843 | Ga0068860_100308511 | Ga0068860_1003085112 | 390 |
| 123 | 3300006358 | Ga0068871_100011051 | Ga0068871_1000110515 | 390 |
| 124 | 3300009553 | Ga0105249_10128452 | Ga0105249_101284523 | 390 |
| 125 | 3300017792 | Ga0163161_10060986 | Ga0163161_100609863 | 390 |
| 126 | 3300025907 | Ga0207645_10001566 | Ga0207645_100015662 | 390 |
| 127 | 3300025926 | Ga0207659_10083486 | Ga0207659_100834863 | 390 |
| 128 | 3300025931 | Ga0207644_10045418 | Ga0207644_100454183 | 390 |
| 129 | 3300025940 | Ga0207691_10000022 | Ga0207691_1000002248 | 390 |
| 130 | 3300025942 | Ga0207689_10011258 | Ga0207689_100112583 | 390 |
| 131 | 3300025960 | Ga0207651_10008537 | Ga0207651_100085374 | 390 |
| 132 | 3300025972 | Ga0207668_10003779 | Ga0207668_100037795 | 390 |
| 133 | 3300026089 | Ga0207648_10017870 | Ga0207648_100178704 | 390 |
| 134 | 3300026118 | Ga0207675_100016851 | Ga0207675_1000168514 | 390 |
| 135 | 3300026121 | Ga0207683_10000283 | Ga0207683_1000028335 | 390 |
| 136 | 3300048912 | Ga0496109_0245635 | Ga0496109_0245635_350_1579 | 390 |
| 137 | 3300005468 | Ga0070707_100319803 | Ga0070707_1003198031 | 391 |
| 138 | 3300025922 | Ga0207646_10273186 | Ga0207646_102731862 | 391 |
| 139 | 3300025936 | Ga0207670_10026174 | Ga0207670_100261742 | 391 |
| 140 | 3300009553 | Ga0105249_10186218 | Ga0105249_101862182 | 392 |
| 141 | iso_pu_bacteria | 2501025502 | 2501081296 | 393 |
| 142 | iso_pu_bacteria | 2510917013 | 2511094246 | 393 |
| 143 | iso_pu_bacteria | 2508501114 | 2509073788 | 394 |
| 144 | iso_pu_bacteria | 2508501114 | 2509074823 | 394 |
| 145 | 3300005548 | Ga0070665_100013255 | Ga0070665_1000132554 | 395 |
| 146 | 3300028379 | Ga0268266_10007335 | Ga0268266_100073354 | 395 |
| 147 | iso_pu_bacteria | 2585428062 | 2587759453 | 395 |
| 148 | 3300044658 | Ga0466972_0028398 | Ga0466972_0028398_1411_2637 | 397 |
| 149 | 3300046512 | Ga0495610_0032078 | Ga0495610_0032078_162_1358 | 398 |
| 150 | 3300046660 | Ga0495625_0012687 | Ga0495625_0012687_5469_6665 | 398 |
| 151 | 3300053134 | Ga0500658_0017281 | Ga0500658_0017281_1303_2499 | 398 |
| 152 | 3300053739 | Ga0500587_001874 | Ga0500587_001874_1515_2711 | 398 |
| 153 | 3300005327 | Ga0070658_10083425 | Ga0070658_100834252 | 399 |
| 154 | 3300028794 | Ga0307515_10000138 | Ga0307515_1000013897 | 399 |
| 155 | 3300028794 | Ga0307515_10019979 | Ga0307515_100199796 | 399 |
| 156 | 3300030522 | Ga0307512_10027057 | Ga0307512_100270572 | 399 |
| 157 | 3300031456 | Ga0307513_10222292 | Ga0307513_102222921 | 399 |
| 158 | 3300031456 | Ga0307513_10227567 | Ga0307513_102275672 | 399 |
| 159 | 3300031616 | Ga0307508_10000509 | Ga0307508_1000050927 | 399 |
| 160 | 3300031649 | Ga0307514_10005578 | Ga0307514_100055783 | 399 |
| 161 | 3300031730 | Ga0307516_10007967 | Ga0307516_100079672 | 399 |
| 162 | 3300041459 | Ga0451800_1025443 | Ga0451800_1025443_293_1492 | 399 |
| 163 | 3300041491 | Ga0451833_1011589 | Ga0451833_1011589_454_1653 | 399 |
| 164 | 3300041498 | Ga0451841_0226543 | Ga0451841_0226543_872_2071 | 399 |
| 165 | 3300046522 | Ga0495643_0046175 | Ga0495643_0046175_458_1657 | 399 |
| 166 | 3300005353 | Ga0070669_100039436 | Ga0070669_1000394362 | 400 |
| 167 | 3300005441 | Ga0070700_100029251 | Ga0070700_1000292511 | 400 |
| 168 | 3300005549 | Ga0070704_100078747 | Ga0070704_1000787472 | 400 |
| 169 | 3300005840 | Ga0068870_10038482 | Ga0068870_100384822 | 400 |
| 170 | 3300006237 | Ga0097621_100029113 | Ga0097621_1000291131 | 400 |
| 171 | 3300013308 | Ga0157375_10206766 | Ga0157375_102067662 | 400 |
| 172 | 3300025908 | Ga0207643_10041624 | Ga0207643_100416241 | 400 |
| 173 | 3300025960 | Ga0207651_10062950 | Ga0207651_100629503 | 400 |
| 174 | 3300025961 | Ga0207712_10107672 | Ga0207712_101076722 | 400 |
| 175 | 3300042876 | Ga0451577_0199544 | Ga0451577_0199544_543_1757 | 400 |
| 176 | 3300003322 | rootL2_10309726 | rootL2_103097261 | 401 |
| 177 | 3300005334 | Ga0068869_100032667 | Ga0068869_1000326673 | 401 |
| 178 | 3300005340 | Ga0070689_100183407 | Ga0070689_1001834071 | 401 |
| 179 | 3300005367 | Ga0070667_100042734 | Ga0070667_1000427343 | 401 |
| 180 | 3300005456 | Ga0070678_100230946 | Ga0070678_1002309462 | 401 |
| 181 | 3300005617 | Ga0068859_100005475 | Ga0068859_10000547510 | 401 |
| 182 | 3300005618 | Ga0068864_100246318 | Ga0068864_1002463181 | 401 |
| 183 | 3300005841 | Ga0068863_100078146 | Ga0068863_1000781462 | 401 |
| 184 | 3300006358 | Ga0068871_100015432 | Ga0068871_1000154324 | 401 |
| 185 | 3300006931 | Ga0097620_100005475 | Ga0097620_10000547510 | 401 |
| 186 | 3300009148 | Ga0105243_10126319 | Ga0105243_101263193 | 401 |
| 187 | 3300009553 | Ga0105249_10246299 | Ga0105249_102462992 | 401 |
| 188 | 3300014969 | Ga0157376_10019054 | Ga0157376_100190542 | 401 |
| 189 | 3300014969 | Ga0157376_10137112 | Ga0157376_101371121 | 401 |
| 190 | 3300025936 | Ga0207670_10138883 | Ga0207670_101388831 | 401 |
| 191 | 3300025942 | Ga0207689_10078090 | Ga0207689_100780901 | 401 |
| 192 | 3300025986 | Ga0207658_10098312 | Ga0207658_100983122 | 401 |
| 193 | 3300026089 | Ga0207648_10041899 | Ga0207648_100418991 | 401 |
| 194 | 3300026121 | Ga0207683_10155570 | Ga0207683_101555703 | 401 |
| 195 | 3300028381 | Ga0268264_10278929 | Ga0268264_102789291 | 401 |
| 196 | 3300031911 | Ga0307412_10010266 | Ga0307412_100102663 | 401 |
| 197 | 3300035398 | Ga0316574_0154984 | Ga0316574_0154984_49_1254 | 401 |
| 198 | 3300036647 | Ga0316582_0080781 | Ga0316582_0080781_113_1318 | 401 |
| 199 | 3300044673 | Ga0453683_0162110 | Ga0453683_0162110_13_1281 | 401 |
| 200 | 3300003215 | JGI25153J46596_10001933 | JGI25153J46596_1000193310 | 402 |
| 201 | 3300025297 | Ga0209758_1000280 | Ga0209758_100028036 | 402 |
| 202 | 3300042876 | Ga0451577_0080414 | Ga0451577_0080414_373_1581 | 402 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8sam-assembly2.cif.gz_B | crystal structure of class iii lanthipeptide synthetase lp-gs-thurkc in complex with atp | 0.7456 | 12 | 402 |
| 8sam-assembly1.cif.gz_A | crystal structure of class iii lanthipeptide synthetase lp-gs-thurkc in complex with atp | 0.7387 | 12 | 402 |
| 3e6u-assembly2.cif.gz_C | crystal structure of human lancl1 | 0.7299 | 3 | 401 |
| 8byk-assembly1.cif.gz_A | the structure of madc from clostridium maddingley reveals new insights into class i lanthipeptide cyclases | 0.7288 | 17 | 399 |
| 8sap-assembly2.cif.gz_B | crystal structure of class iii lanthipeptide synthetase thurkc | 0.7282 | 12 | 402 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0R0HIX3_87_445_1.50.10.10 | Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; | 0.7423 | 20 | 401 | 1.50.10.10 |
| af_Q9Y0Y7_1_417_1.50.10.10 | Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; | 0.7391 | 7 | 401 | 1.50.10.10 |
| af_A0A0R0HIX3_87_445_1.50.10.10 | Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; | 0.7386 | 20 | 401 | 1.50.10.10 |
| af_Q9Y0Y7_1_417_1.50.10.10 | Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; | 0.7259 | 7 | 401 | 1.50.10.10 |
| af_Q9FJN7_47_433_1.50.10.10 | Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; | 0.7217 | 18 | 401 | 1.50.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6M5XMS7-F1-model_v4 | deleted | 0.9908 | 303 | 400 |
|
| AF-A0A3N7HLP4-F1-model_v4 | Lanthionine synthetase | 0.9799 | 1 | 401 |
GO:0005886
GO:0005975 GO:0031179 |
| AF-A0A3N7HLP4-F1-model_v4 | Lanthionine synthetase | 0.9751 | 1 | 401 |
GO:0005886
GO:0005975 GO:0031179 |
| AF-A0A7Y6PYB6-F1-model_v4 | Lanthionine synthetase | 0.9608 | 1 | 402 |
GO:0005886
GO:0005975 GO:0031179 |
| AF-A0A7Y6PYB6-F1-model_v4 | Lanthionine synthetase | 0.9584 | 1 | 402 |
GO:0005886
GO:0005975 GO:0031179 |
Predicted Structure (AlphaFold2)
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