F310259

General Info

Members Datasets Scaffolds Average Seq Length
202 162 166 368

Family's Representative Sequence

Representative Sequence 3300046453|Ga0495627_001304|Ga0495627_001304_11675_13012
Length 445
Sequence LKAWIEFVNVRFWGMEIANGRQQRVGCDSPGALSAFLEAVTGPDIRRILRGECCCACGGIMSIFTAKGAVIVPYIHELTDWPNLIWNEPELFQPFAAVRHRQGRLIGHMQVLGFPLREEAVLYALTEDVLKSSEIEGEILDREQVRSSIARRLGMDISGLVEADRDVEGVVEMMLDATQNYAQPLTAERLFNWHAALFPTGRSGMSRITVGAWRGIEAGAMQVVSGPIGRERIHYQAPSSDLLDREMSRFLAWFDTATLDPVLKAGVAHLWFVTIHPFDYGNGRIARAIADLALARAEGTAQRFYSMSAQIRAERKAYYDMLETTQRGGLDITAWLLWFINCLDRAFDRAELILANVMRKAKFWDSIVGQSLNDRQQKVLNRLLAGFEGKLTNAKWATMTKTSSDTALRDINDLVRRGILEKDSAGGRSVGYSLVGEIKMENPTA

Samples

Sample ID Description Type Environment
1 2509276018 Mesorhizobium ciceri CMG6 Isolate Nodule
2 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
3 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
4 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
5 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
6 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
7 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
8 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
9 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
10 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
11 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
12 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
13 2869249662 Mesorhizobium sp. M7A.F.Ca.CA.001.16.1.1 Isolate Nodule
14 2869264136 Mesorhizobium sp. M7A.F.Ca.CA.001.15.1.1 Isolate Nodule
15 2871459585 Mesorhizobium sp. M7A.F.Ca.CA.001.09.1.1 Isolate Nodule
16 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
17 2874131515 Mesorhizobium sp. M7A.F.Ca.CA.001.05.1.1 Isolate Nodule
18 2878730984 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.1 Isolate Nodule
19 2903513507 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.2 Isolate Nodule
20 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
21 2906363423 Mesorhizobium sp. M7A.F.Ca.CA.001.14.1.1 Isolate Nodule
22 2906370794 Mesorhizobium sp. M7A.F.Ca.CA.001.13.1.1 Isolate Nodule
23 2906393657 Mesorhizobium sp. M7A.F.Ca.CA.001.11.2.1 Isolate Nodule
24 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
25 2965040258 Mesorhizobium sp. M7A.F.Ca.CA.001.06.1.1 Isolate Nodule
26 2965089291 Mesorhizobium sp. M7A.F.Ca.CA.001.04.1.1 Isolate Nodule
27 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
28 2977915119 Mesorhizobium sp. M7A.F.Ca.CA.001.09.2.1 Isolate Nodule
29 2977950692 Mesorhizobium sp. M7A.F.Ca.CA.001.04.2.1 Isolate Nodule
30 3004195979 Mesorhizobium sp. M7A.F.Ca.CA.001.08.2.1 Isolate Nodule
31 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
32 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
33 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
34 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
35 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
36 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
37 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
38 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
39 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
40 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
41 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
42 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
43 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
44 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
45 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
93 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
94 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
95 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
100 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
101 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
102 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
103 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
112 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
113 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
114 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
118 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
119 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
120 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
121 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
122 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
123 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
151 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
152 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
153 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
154 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
155 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
156 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
157 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
160 8004361976 Mesorhizobium sp. M7A.F.Ca.CA.001.08.1.1 Isolate Nodule
161 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
162 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.18
Metatranscriptomes 0
Isolates 17.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.92
Nodule 13.37
Rhizoplane 0.99
Rhizosphere 67.33
Stem 0
Stem Tuber 0
Unclassified 10.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10001114 3300003320 Bacteria 36594
2 rootL2_10029384 3300003322 Bacteria 16513
3 rootL2_10047737 3300003322 Bacteria 4797
4 rootL2_10127735 3300003322 Bacteria 2388
5 rootH1_10070910 3300003323 Bacteria 2255
6 rootH1_10357347 3300003323 Bacteria 1216
7 rootH1_10378765 3300003323 Unclassified 1368
8 JGI25160J50197_1013768 3300003354 Bacteria 2740
9 Ga0055531_10000893 3300003794 Bacteria 24386
10 Ga0070683_100011103 3300005329 Bacteria 7767
11 Ga0070666_10022821 3300005335 Unclassified 4067
12 Ga0070660_100005468 3300005339 Bacteria 8795
13 Ga0070661_100039656 3300005344 Bacteria 3432
14 Ga0070709_10011910 3300005434 Bacteria 4858
15 Ga0070681_10085191 3300005458 Bacteria 3113
16 Ga0070679_100292585 3300005530 Bacteria 1580
17 Ga0070684_100024115 3300005535 Bacteria 5100
18 Ga0068855_100004906 3300005563 Bacteria 16327
19 Ga0068855_100109024 3300005563 Bacteria 3180
20 Ga0068857_100000748 3300005577 Bacteria 24214
21 Ga0068856_100178907 3300005614 Bacteria 2134
22 Ga0068851_10000059 3300005834 Bacteria 62229
23 Ga0068851_10007905 3300005834 Bacteria 4899
24 Ga0081455_10004016 3300005937 Bacteria 16690
25 Ga0081455_10061617 3300005937 Bacteria 3156
26 Ga0070717_10060660 3300006028 Bacteria 3132
27 Ga0075365_10205091 3300006038 Bacteria 1382
28 Ga0075367_10161353 3300006178 Bacteria 1394
29 Ga0075428_100004374 3300006844 Bacteria 15594
30 Ga0075431_100000021 3300006847 Bacteria 82774
31 Ga0075429_100002941 3300006880 Bacteria 14446
32 Ga0105240_10001076 3300009093 Bacteria 48242
33 Ga0105240_10017355 3300009093 Bacteria 9703
34 Ga0105240_10144125 3300009093 Bacteria 2844
35 Ga0105240_10326398 3300009093 Bacteria 1748
36 Ga0111539_10000144 3300009094 Bacteria 81842
37 Ga0114129_10000068 3300009147 Bacteria 93579
38 Ga0105241_10085566 3300009174 Bacteria 2478
39 Ga0105237_10003433 3300009545 Bacteria 18817
40 Ga0105237_10007861 3300009545 Bacteria 11626
41 Ga0105237_10012475 3300009545 Bacteria 8955
42 Ga0105237_10028418 3300009545 Bacteria 5697
43 Ga0105238_10012141 3300009551 Bacteria 8682
44 Ga0105238_10169017 3300009551 Bacteria 2163
45 Ga0105238_10270831 3300009551 Bacteria 1679
46 Ga0105239_10000007 3300010375 Bacteria 385297
47 Ga0105239_10157777 3300010375 Bacteria 2535
48 Ga0157370_10212168 3300013104 Bacteria 1794
49 Ga0157369_10001565 3300013105 Bacteria 28007
50 Ga0157369_10120219 3300013105 Bacteria 2788
51 Ga0157374_10198995 3300013296 Bacteria 1961
52 Ga0157372_10013481 3300013307 Bacteria 8736
53 Ga0157372_10029649 3300013307 Bacteria 5977
54 Ga0157372_10052551 3300013307 Bacteria 4538
55 Ga0157372_10253560 3300013307 Bacteria 2043
56 Ga0214544_1001503 3300021320 Bacteria 48633
57 Ga0214544_1009140 3300021320 Bacteria 15797
58 Ga0213872_10002836 3300021361 Bacteria 9910
59 Ga0213872_10010682 3300021361 Bacteria 4363
60 Ga0209676_1002022 3300025292 Bacteria 15925
61 Ga0209050_1001750 3300025298 Bacteria 21568
62 Ga0207426_1000157 3300025302 Bacteria 178442
63 Ga0209051_1005216 3300025303 Bacteria 7674
64 Ga0209257_1001371 3300025304 Bacteria 29367
65 Ga0207656_10000600 3300025321 Bacteria 11925
66 Ga0207656_10004446 3300025321 Bacteria 4899
67 Ga0207680_10014623 3300025903 Unclassified 4070
68 Ga0207705_10196928 3300025909 Bacteria 1525
69 Ga0207695_10019461 3300025913 Bacteria 7820
70 Ga0207695_10027305 3300025913 Bacteria 6359
71 Ga0207695_10143184 3300025913 Bacteria 2337
72 Ga0207671_10000937 3300025914 Bacteria 36380
73 Ga0207671_10004846 3300025914 Bacteria 12673
74 Ga0207671_10012426 3300025914 Bacteria 6845
75 Ga0207660_10017732 3300025917 Bacteria 4736
76 Ga0207657_10002618 3300025919 Bacteria 19440
77 Ga0207652_10067809 3300025921 Bacteria 3094
78 Ga0207694_10158224 3300025924 Bacteria 1828
79 Ga0207659_10048850 3300025926 Bacteria 2999
80 Ga0207661_10077792 3300025944 Bacteria 2729
81 Ga0207667_10002702 3300025949 Bacteria 21955
82 Ga0207667_10226479 3300025949 Bacteria 1915
83 Ga0207640_10016812 3300025981 Bacteria 4265
84 Ga0207674_10017843 3300026116 Bacteria 7737
85 Ga0209588_1049650 3300027671 Bacteria 1358
86 Ga0207428_10019601 3300027907 Bacteria 5764
87 Ga0268264_10051367 3300028381 Bacteria 3435
88 Ga0265319_1007742 3300028563 Bacteria 4789
89 Ga0265323_10011526 3300028653 Bacteria 3567
90 Ga0265325_10025971 3300031241 Bacteria 3177
91 Ga0265339_10020538 3300031249 Bacteria 3856
92 Ga0265331_10034355 3300031250 Bacteria 2502
93 Ga0265327_10041886 3300031251 Bacteria 2463
94 Ga0265316_10003877 3300031344 Bacteria 15000
95 Ga0265316_10042815 3300031344 Bacteria 3615
96 Ga0265316_10142837 3300031344 Bacteria 1797
97 Ga0307509_10140912 3300031507 Bacteria 2347
98 Ga0265342_10069268 3300031712 Bacteria 2060
99 Ga0316576_10021221 3300031727 Bacteria 4488
100 Ga0316576_10052421 3300031727 Bacteria 2971
101 Ga0373943_0016622 3300035170 Bacteria 3357
102 Ga0373935_0026460 3300035692 Unclassified 3580
103 Ga0373927_0003643 3300035695 Bacteria 10981
104 Ga0373927_0089663 3300035695 Bacteria 1997
105 Ga0373947_0001035 3300035725 Bacteria 17011
106 Ga0373925_0000609 3300037068 Bacteria 34129
107 Ga0436361_0056287 3300039447 Bacteria 40350
108 Ga0436361_0530772 3300039447 Bacteria 2306
109 Ga0436361_0920725 3300039447 Bacteria 2493
110 Ga0466966_0002805 3300044684 Bacteria 11459
111 Ga0466966_0228794 3300044684 Bacteria 1122
112 Ga0453684_0082797 3300044712 Bacteria 3996
113 Ga0453684_0460029 3300044712 Bacteria 1415
114 Ga0466959_0146742 3300045049 Bacteria 1664
115 Ga0495627_001304 3300046453 Bacteria 15211
116 Ga0495650_0002398 3300046471 Bacteria 15306
117 Ga0495650_0022819 3300046471 Bacteria 2993
118 Ga0495639_0002831 3300046475 Bacteria 7537
119 Ga0495608_0061342 3300046511 Bacteria 2473
120 Ga0495610_0009363 3300046512 Bacteria 6198
121 Ga0495630_0000002 3300046517 Bacteria 1277125
122 Ga0495648_0089382 3300046524 Bacteria 1729
123 Ga0495663_0052285 3300046525 Unclassified 1268
124 Ga0495633_0000022 3300046558 Bacteria 226582
125 Ga0495671_0085325 3300046692 Bacteria 1547
126 Ga0495636_0072501 3300047318 Bacteria 1472
127 Ga0495673_0016501 3300047469 Bacteria 3774
128 Ga0495681_0001901 3300047470 Bacteria 15333
129 Ga0495686_0000550 3300047472 Bacteria 53672
130 Ga0495626_0006207 3300048091 Bacteria 6828
131 Ga0496113_0147518 3300048916 Bacteria 1854
132 Ga0496115_0030679 3300048918 Bacteria 4231
133 Ga0496116_0082704 3300048919 Bacteria 1985
134 Ga0496121_0000213 3300048924 Bacteria 127487
135 Ga0496122_0041943 3300048925 Bacteria 3608
136 Ga0496125_0002059 3300048928 Bacteria 27177
137 Ga0496126_0091115 3300048929 Bacteria 2681
138 Ga0501031_0081983 3300049568 Bacteria 2103
139 Ga0501034_0018505 3300049571 Bacteria 7142
140 Ga0501036_0006672 3300049572 Bacteria 9383
141 Ga0501041_0103084 3300049577 Bacteria 1767
142 Ga0501047_0020641 3300049581 Bacteria 6325
143 Ga0501047_0089007 3300049581 Bacteria 2964
144 Ga0501071_0062894 3300049587 Bacteria 2690
145 Ga0501071_0127232 3300049587 Bacteria 1891
146 Ga0501072_0000464 3300049588 Bacteria 29314
147 Ga0501075_0028335 3300049591 Bacteria 4134
148 Ga0501076_0097103 3300049592 Bacteria 2373
149 Ga0501081_0062527 3300049743 Bacteria 2582
150 Ga0501035_0044679 3300049822 Bacteria 3988
151 Ga0501044_0013500 3300049823 Bacteria 8834
152 Ga0501044_0329142 3300049823 Bacteria 1451
153 nmdc:mga05p37_52_c1 3300050507 Bacteria 102932
154 nmdc:mga09592_12851_c1 3300050508 Bacteria 6826
155 nmdc:mga06r32_4_c1 3300050510 Bacteria 144637
156 nmdc:mga08y16_822_c1 3300050511 Bacteria 29788
157 Ga0495619_0198105 3300053085 Bacteria 1390
158 Ga0500651_0024970 3300053093 Bacteria 3749
159 Ga0500608_000448 3300053122 Bacteria 15518
160 Ga0500652_019747 3300053131 Bacteria 2509
161 Ga0500559_0000100 3300053136 Bacteria 67173
162 Ga0500588_0002125 3300053146 Bacteria 3959
163 Ga0500622_0001922 3300053156 Bacteria 15663
164 Ga0500596_004351 3300053735 Bacteria 2603
165 Ga0466962_0038462 3300061719 Bacteria 2291
166 Ga0530510_0030871 3300061734 Bacteria 3851

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025909 Ga0207705_10196928 Ga0207705_101969281 328
2 3300025914 Ga0207671_10004846 Ga0207671_100048468 328
3 3300025921 Ga0207652_10067809 Ga0207652_100678093 328
4 3300025924 Ga0207694_10158224 Ga0207694_101582242 328
5 3300025949 Ga0207667_10226479 Ga0207667_102264793 328
6 3300046511 Ga0495608_0061342 Ga0495608_0061342_48_1037 329
7 3300048916 Ga0496113_0147518 Ga0496113_0147518_42_1031 329
8 3300035170 Ga0373943_0016622 Ga0373943_0016622_994_1986 330
9 3300035692 Ga0373935_0026460 Ga0373935_0026460_109_1101 330
10 3300035695 Ga0373927_0003643 Ga0373927_0003643_6218_7210 330
11 3300035725 Ga0373947_0001035 Ga0373947_0001035_1253_2245 330
12 3300037068 Ga0373925_0000609 Ga0373925_0000609_18281_19273 330
13 3300044684 Ga0466966_0228794 Ga0466966_0228794_110_1108 331
14 3300048919 Ga0496116_0082704 Ga0496116_0082704_25_1107 331
15 3300049572 Ga0501036_0006672 Ga0501036_0006672_188_1183 331
16 3300049581 Ga0501047_0020641 Ga0501047_0020641_274_1269 331
17 3300049822 Ga0501035_0044679 Ga0501035_0044679_2750_3745 331
18 3300049823 Ga0501044_0013500 Ga0501044_0013500_7516_8511 331
19 3300048918 Ga0496115_0030679 Ga0496115_0030679_3215_4216 332
20 3300006028 Ga0070717_10060660 Ga0070717_100606604 346
21 3300005530 Ga0070679_100292585 Ga0070679_1002925851 355
22 iso_pu_bacteria 2791355197 2793071648 361
23 3300046475 Ga0495639_0002831 Ga0495639_0002831_5180_6277 362
24 3300046517 Ga0495630_0000002 Ga0495630_0000002_1185497_1186594 362
25 iso_pu_bacteria 2523533628 2524001474 362
26 iso_pu_bacteria 2513237098 2513677678 363
27 iso_pu_bacteria 2522125168 2522547819 363
28 iso_pu_bacteria 2582581280 2585152586 363
29 iso_pu_bacteria 2841949485 2841953685 364
30 iso_pu_bacteria 8006984368 8006985414 364
31 iso_pu_bacteria 2848297114 2848300029 365
32 3300003794 Ga0055531_10000893 Ga0055531_1000089314 366
33 3300005329 Ga0070683_100011103 Ga0070683_1000111036 366
34 3300005339 Ga0070660_100005468 Ga0070660_1000054682 366
35 3300005344 Ga0070661_100039656 Ga0070661_1000396561 366
36 3300005458 Ga0070681_10085191 Ga0070681_100851914 366
37 3300005563 Ga0068855_100109024 Ga0068855_1001090243 366
38 3300005834 Ga0068851_10007905 Ga0068851_100079053 366
39 3300009093 Ga0105240_10017355 Ga0105240_100173556 366
40 3300009093 Ga0105240_10144125 Ga0105240_101441252 366
41 3300009545 Ga0105237_10007861 Ga0105237_1000786110 366
42 3300009545 Ga0105237_10012475 Ga0105237_100124752 366
43 3300009551 Ga0105238_10012141 Ga0105238_100121415 366
44 3300009551 Ga0105238_10169017 Ga0105238_101690172 366
45 3300010375 Ga0105239_10000007 Ga0105239_1000000718 366
46 3300010375 Ga0105239_10157777 Ga0105239_101577773 366
47 3300013105 Ga0157369_10120219 Ga0157369_101202192 366
48 3300025292 Ga0209676_1002022 Ga0209676_10020226 366
49 3300025298 Ga0209050_1001750 Ga0209050_100175010 366
50 3300025303 Ga0209051_1005216 Ga0209051_100521610 366
51 3300025304 Ga0209257_1001371 Ga0209257_100137116 366
52 3300025321 Ga0207656_10004446 Ga0207656_100044463 366
53 3300025913 Ga0207695_10143184 Ga0207695_101431841 366
54 3300025914 Ga0207671_10000937 Ga0207671_100009375 366
55 3300025917 Ga0207660_10017732 Ga0207660_100177323 366
56 3300025919 Ga0207657_10002618 Ga0207657_1000261810 366
57 3300025944 Ga0207661_10077792 Ga0207661_100777921 366
58 3300031249 Ga0265339_10020538 Ga0265339_100205385 366
59 3300031344 Ga0265316_10142837 Ga0265316_101428372 366
60 3300031507 Ga0307509_10140912 Ga0307509_101409122 366
61 3300049568 Ga0501031_0081983 Ga0501031_0081983_92_1192 366
62 3300049577 Ga0501041_0103084 Ga0501041_0103084_645_1745 366
63 3300049587 Ga0501071_0062894 Ga0501071_0062894_1380_2480 366
64 3300053131 Ga0500652_019747 Ga0500652_019747_1379_2479 366
65 iso_pu_bacteria 2509276018 2509370246 366
66 iso_pu_bacteria 2824679649 2824680123 366
67 iso_pu_bacteria 2824753945 2824755922 366
68 iso_pu_bacteria 2824763712 2824764975 366
69 iso_pu_bacteria 2869234852 2869234982 366
70 iso_pu_bacteria 2869249662 2869255777 366
71 iso_pu_bacteria 2869264136 2869269743 366
72 iso_pu_bacteria 2871459585 2871461270 366
73 iso_pu_bacteria 2874109183 2874110514 366
74 iso_pu_bacteria 2874131515 2874134398 366
75 iso_pu_bacteria 2878730984 2878737534 366
76 iso_pu_bacteria 2903513507 2903520118 366
77 iso_pu_bacteria 2904711408 2904715974 366
78 iso_pu_bacteria 2906363423 2906370551 366
79 iso_pu_bacteria 2906370794 2906376480 366
80 iso_pu_bacteria 2906393657 2906396473 366
81 iso_pu_bacteria 2909399089 2909401442 366
82 iso_pu_bacteria 2965040258 2965042540 366
83 iso_pu_bacteria 2965089291 2965094565 366
84 iso_pu_bacteria 2970510686 2970515085 366
85 iso_pu_bacteria 2977915119 2977921976 366
86 iso_pu_bacteria 2977950692 2977953007 366
87 iso_pu_bacteria 3004195979 3004197357 366
88 iso_pu_bacteria 3004232784 3004235177 366
89 iso_pu_bacteria 3005594810 3005597978 366
90 iso_pu_bacteria 643348555 643391297 366
91 iso_pu_bacteria 8004361976 8004369347 366
92 iso_pu_bacteria 8024486573 8024488534 366
93 3300003322 rootL2_10029384 rootL2_100293847 367
94 3300003323 rootH1_10378765 rootH1_103787651 367
95 3300003354 JGI25160J50197_1013768 JGI25160J50197_10137684 367
96 3300005335 Ga0070666_10022821 Ga0070666_100228214 367
97 3300005535 Ga0070684_100024115 Ga0070684_1000241156 367
98 3300005563 Ga0068855_100004906 Ga0068855_1000049062 367
99 3300005614 Ga0068856_100178907 Ga0068856_1001789072 367
100 3300006038 Ga0075365_10205091 Ga0075365_102050911 367
101 3300009093 Ga0105240_10001076 Ga0105240_1000107612 367
102 3300009174 Ga0105241_10085566 Ga0105241_100855662 367
103 3300013104 Ga0157370_10212168 Ga0157370_102121682 367
104 3300013105 Ga0157369_10001565 Ga0157369_1000156517 367
105 3300013296 Ga0157374_10198995 Ga0157374_101989952 367
106 3300013307 Ga0157372_10013481 Ga0157372_100134817 367
107 3300021361 Ga0213872_10002836 Ga0213872_100028364 367
108 3300021361 Ga0213872_10010682 Ga0213872_100106825 367
109 3300025302 Ga0207426_1000157 Ga0207426_100015750 367
110 3300025903 Ga0207680_10014623 Ga0207680_100146234 367
111 3300025913 Ga0207695_10019461 Ga0207695_100194617 367
112 3300025913 Ga0207695_10027305 Ga0207695_100273051 367
113 3300025949 Ga0207667_10002702 Ga0207667_100027028 367
114 3300028381 Ga0268264_10051367 Ga0268264_100513671 367
115 3300028563 Ga0265319_1007742 Ga0265319_10077421 367
116 3300031727 Ga0316576_10052421 Ga0316576_100524214 367
117 3300039447 Ga0436361_0056287 Ga0436361_0056287_18058_19161 367
118 3300039447 Ga0436361_0530772 Ga0436361_0530772_379_1482 367
119 3300046471 Ga0495650_0022819 Ga0495650_0022819_1565_2668 367
120 3300053136 Ga0500559_0000100 Ga0500559_0000100_22549_23652 367
121 3300003322 rootL2_10047737 rootL2_100477372 368
122 3300003322 rootL2_10127735 rootL2_101277353 368
123 3300003323 rootH1_10357347 rootH1_103573471 368
124 3300005577 Ga0068857_100000748 Ga0068857_10000074824 368
125 3300005834 Ga0068851_10000059 Ga0068851_1000005939 368
126 3300005937 Ga0081455_10004016 Ga0081455_100040168 368
127 3300005937 Ga0081455_10061617 Ga0081455_100616173 368
128 3300006844 Ga0075428_100004374 Ga0075428_1000043747 368
129 3300006847 Ga0075431_100000021 Ga0075431_10000002148 368
130 3300006880 Ga0075429_100002941 Ga0075429_1000029413 368
131 3300009094 Ga0111539_10000144 Ga0111539_1000014431 368
132 3300009147 Ga0114129_10000068 Ga0114129_1000006815 368
133 3300013307 Ga0157372_10029649 Ga0157372_100296491 368
134 3300021320 Ga0214544_1001503 Ga0214544_100150311 368
135 3300025321 Ga0207656_10000600 Ga0207656_100006003 368
136 3300026116 Ga0207674_10017843 Ga0207674_100178433 368
137 3300027671 Ga0209588_1049650 Ga0209588_10496502 368
138 3300027907 Ga0207428_10019601 Ga0207428_100196012 368
139 3300031727 Ga0316576_10021221 Ga0316576_100212214 368
140 3300035695 Ga0373927_0089663 Ga0373927_0089663_85_1215 368
141 3300044712 Ga0453684_0082797 Ga0453684_0082797_1408_2514 368
142 3300044712 Ga0453684_0460029 Ga0453684_0460029_43_1149 368
143 3300046525 Ga0495663_0052285 Ga0495663_0052285_81_1193 368
144 3300046558 Ga0495633_0000022 Ga0495633_0000022_162885_163997 368
145 3300046692 Ga0495671_0085325 Ga0495671_0085325_398_1504 368
146 3300048091 Ga0495626_0006207 Ga0495626_0006207_5093_6217 368
147 3300048928 Ga0496125_0002059 Ga0496125_0002059_2522_3646 368
148 3300049587 Ga0501071_0127232 Ga0501071_0127232_755_1861 368
149 3300049588 Ga0501072_0000464 Ga0501072_0000464_8043_9149 368
150 3300049591 Ga0501075_0028335 Ga0501075_0028335_1897_3003 368
151 3300049592 Ga0501076_0097103 Ga0501076_0097103_1166_2272 368
152 3300049743 Ga0501081_0062527 Ga0501081_0062527_325_1431 368
153 3300050507 nmdc:mga05p37_52_c1 nmdc:mga05p37_52_c1_58481_59587 368
154 3300050508 nmdc:mga09592_12851_c1 nmdc:mga09592_12851_c1_2020_3126 368
155 3300050510 nmdc:mga06r32_4_c1 nmdc:mga06r32_4_c1_7786_8892 368
156 3300050511 nmdc:mga08y16_822_c1 nmdc:mga08y16_822_c1_20981_22087 368
157 3300053085 Ga0495619_0198105 Ga0495619_0198105_61_1170 368
158 3300053093 Ga0500651_0024970 Ga0500651_0024970_701_1813 368
159 3300053122 Ga0500608_000448 Ga0500608_000448_1813_2922 368
160 3300053735 Ga0500596_004351 Ga0500596_004351_1310_2416 368
161 3300061734 Ga0530510_0030871 Ga0530510_0030871_1323_2429 368
162 3300005434 Ga0070709_10011910 Ga0070709_100119104 369
163 3300009093 Ga0105240_10326398 Ga0105240_103263982 369
164 3300009545 Ga0105237_10028418 Ga0105237_100284181 369
165 3300009551 Ga0105238_10270831 Ga0105238_102708312 369
166 3300013307 Ga0157372_10253560 Ga0157372_102535602 369
167 3300025926 Ga0207659_10048850 Ga0207659_100488502 369
168 3300028653 Ga0265323_10011526 Ga0265323_100115263 369
169 3300031241 Ga0265325_10025971 Ga0265325_100259711 369
170 3300031250 Ga0265331_10034355 Ga0265331_100343553 369
171 3300031251 Ga0265327_10041886 Ga0265327_100418863 369
172 3300031344 Ga0265316_10003877 Ga0265316_100038773 369
173 3300031344 Ga0265316_10042815 Ga0265316_100428155 369
174 3300045049 Ga0466959_0146742 Ga0466959_0146742_16_1128 369
175 3300046453 Ga0495627_001304 Ga0495627_001304_11675_13012 369
176 3300046471 Ga0495650_0002398 Ga0495650_0002398_2200_3537 369
177 3300046512 Ga0495610_0009363 Ga0495610_0009363_3646_4776 369
178 3300046524 Ga0495648_0089382 Ga0495648_0089382_495_1625 369
179 3300047318 Ga0495636_0072501 Ga0495636_0072501_98_1225 369
180 3300047470 Ga0495681_0001901 Ga0495681_0001901_11797_13134 369
181 3300061719 Ga0466962_0038462 Ga0466962_0038462_689_1801 369
182 3300003320 rootH2_10001114 rootH2_1000111419 370
183 3300003323 rootH1_10070910 rootH1_100709102 370
184 3300006178 Ga0075367_10161353 Ga0075367_101613532 370
185 3300009545 Ga0105237_10003433 Ga0105237_1000343313 370
186 3300013307 Ga0157372_10052551 Ga0157372_100525512 370
187 3300021320 Ga0214544_1009140 Ga0214544_10091403 370
188 3300025914 Ga0207671_10012426 Ga0207671_100124264 370
189 3300025981 Ga0207640_10016812 Ga0207640_100168125 370
190 3300031712 Ga0265342_10069268 Ga0265342_100692683 370
191 3300039447 Ga0436361_0920725 Ga0436361_0920725_460_1590 370
192 3300044684 Ga0466966_0002805 Ga0466966_0002805_4007_5170 370
193 3300047469 Ga0495673_0016501 Ga0495673_0016501_499_1611 370
194 3300047472 Ga0495686_0000550 Ga0495686_0000550_34955_36067 370
195 3300048924 Ga0496121_0000213 Ga0496121_0000213_980_2092 370
196 3300048925 Ga0496122_0041943 Ga0496122_0041943_1923_3305 370
197 3300048929 Ga0496126_0091115 Ga0496126_0091115_939_2051 370
198 3300049571 Ga0501034_0018505 Ga0501034_0018505_3723_4844 370
199 3300049581 Ga0501047_0089007 Ga0501047_0089007_695_1825 370
200 3300049823 Ga0501044_0329142 Ga0501044_0329142_299_1429 370
201 3300053146 Ga0500588_0002125 Ga0500588_0002125_1811_2947 370
202 3300053156 Ga0500622_0001922 Ga0500622_0001922_5251_6477 370

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13776

DUF4172

Domain of unknown function (DUF4172)

74

155

1

PF02661

Fic

Fic/DOC family

184

294

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8cil-assembly1.cif.gz_A crystal structure of coxiella burnetii fic protein 2 0.9156 1 365
5zuo-assembly1.cif.gz_A crystal structure of bz junction in diverse sequence 0.9035 323 367
8cil-assembly1.cif.gz_A crystal structure of coxiella burnetii fic protein 2 0.9011 1 365
1mkm-assembly1.cif.gz_B crystal structure of the thermotoga maritima iclr 0.8849 306 365
8cil-assembly1.cif.gz_B crystal structure of coxiella burnetii fic protein 2 0.8834 4 365
ID Description Score Start End Superfamily
5zuoA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9035 323 367 1.10.10.10
1jmrA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8868 306 365 1.10.10.10
af_Q58088_26_109_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8866 322 366 1.10.10.10
1mkmB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8849 306 365 1.10.10.10
1mkmA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.883 306 364 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7C7UWM5-F1-model_v4 Fic family protein 0.9931 3 242 GO:0005524
AF-A0A7C6EXB4-F1-model_v4 Fic family protein 0.9917 3 292 GO:0005524
AF-A0A7V6NH14-F1-model_v4 DUF4172 domain-containing protein 0.9892 288 365
AF-A0A6L8GHD4-F1-model_v4 Fic family protein 0.9886 1 289 GO:0005524
AF-X1SSF4-F1-model_v4 DUF4172 domain-containing protein 0.9871 3 196

Feature Viewer

pLDDT pTM Quality
92.26 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map