F310286

General Info

Members Datasets Scaffolds Average Seq Length
202 134 404 589

Family's Representative Sequence

Representative Sequence 3300046492|Ga0495585_0007348|Ga0495585_0007348_166_2007
Length 613
Sequence MTCFDATNMCFNLTPIPMQLNVSKKIQMKRIAILLTFCFFNTASFCQTTASYKWLDPATAGFPVIEGQAWPAETANTYDRFPARAEKSLNPNVWNISHSSAGLYIKFKTDAPNLVIRYKVKGDLAMSHMPATGVSGVDLYALDPNGKWCLAPGSFTFKDTITYRFSNIQVSKSFPGRSYEYRLFLPLYNSVSWLQVGVPVGNTFNFMPLSKEKPVLVYGTSIAQGACASRPGLAWTALLQRALDRPLINLGFSGSGRLEKSVIDLMAEVDAKIYVLDCMPNLISFPDQEIETRLSASIQGLQEKHPLTPILLVEHSEGNVDGLLDTGRNTDYNRVNKVLNQTYSRLIAAGAKNIYLLTNKEIAFDINSTVDGVHPNDAGMQKYADAYEKAIRVIINEPAGPYSTTLPVVQSRDGYYDWRNRHNEILTLVKTDAPKIVFLGNSILNYWGGTPKAPLARGATSWDKYLQPLGVKNFGFGWDQVENVLWRVYHGELDGFKANKVMIMIGTNNLSINNDQEIIEGLRLLVQAVKVRQPQTQILLSGLLPRRALEKRVGALNKAVAKLAAQTGVRFINPGKIFLNNAGNIDESLFGDGLHPNEVGYQKLAVALVSYLK

Samples

Sample ID Description Type Environment
1 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
59 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
87 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
96 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
99 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
100 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
101 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
102 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
106 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
108 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
109 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
110 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
111 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
112 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
113 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
114 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
115 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
116 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
117 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
118 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
119 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
120 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
121 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
122 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
123 2738541284 Pedobacter sp. YR016 Isolate Unclassified
124 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
125 2818991444 Filimonas endophytica 3197 Isolate Unclassified
126 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
127 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
128 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
129 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
130 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
131 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
132 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
133 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
134 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.07
Metatranscriptomes 0
Isolates 6.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.39
Nodule 0
Rhizoplane 0.5
Rhizosphere 80.2
Stem 0
Stem Tuber 0
Unclassified 5.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495585_0007348 3300046492 Bacteria 6752
2 SwRhRL2b_contig_2682574 2162886007 Bacteria 11840
3 JGI24739J22299_10002735 3300001989 Bacteria 6790
4 rootH1_10100969 3300003316 Bacteria 2699
5 rootH1_10145641 3300003316 Bacteria 3193
6 rootL2_10001477 3300003322 Bacteria 4813
7 rootL2_10001896 3300003322 Bacteria 54565
8 rootH1_10014133 3300003323 Bacteria 17251
9 Ga0055542_1003071 3300003762 Bacteria 4806
10 Ga0065165_1000060 3300005262 Bacteria 180226
11 Ga0065714_10002620 3300005288 Bacteria 30664
12 Ga0065704_10070286 3300005289 Bacteria 39355
13 Ga0065704_10088622 3300005289 Bacteria 2924
14 Ga0070658_10102010 3300005327 Bacteria 2372
15 Ga0070676_10001384 3300005328 Bacteria 12228
16 Ga0070683_100038916 3300005329 Bacteria 4362
17 Ga0068869_100077884 3300005334 Unclassified 2468
18 Ga0070666_10006867 3300005335 Bacteria 7010
19 Ga0070666_10026579 3300005335 Bacteria 3784
20 Ga0070680_100043326 3300005336 Unclassified 3656
21 Ga0070680_100085172 3300005336 Unclassified 2611
22 Ga0068868_100002856 3300005338 Bacteria 11976
23 Ga0068868_100092230 3300005338 Unclassified 2441
24 Ga0070660_100004164 3300005339 Bacteria 9991
25 Ga0070668_100000373 3300005347 Bacteria 29627
26 Ga0070668_100002123 3300005347 Bacteria 14496
27 Ga0070669_100050640 3300005353 Bacteria 3034
28 Ga0070671_100019509 3300005355 Bacteria 5520
29 Ga0070671_100030442 3300005355 Bacteria 4454
30 Ga0070674_100002657 3300005356 Bacteria 9903
31 Ga0070673_100000503 3300005364 Bacteria 20920
32 Ga0070667_100043472 3300005367 Bacteria 3771
33 Ga0070681_10176569 3300005458 Bacteria 2058
34 Ga0068867_100002130 3300005459 Bacteria 13900
35 Ga0068867_100006388 3300005459 Bacteria 8330
36 Ga0070679_100033758 3300005530 Bacteria 5067
37 Ga0070679_100106376 3300005530 Unclassified 2791
38 Ga0068853_100005707 3300005539 Bacteria 9792
39 Ga0068853_100067511 3300005539 Bacteria 3107
40 Ga0070665_100000066 3300005548 Bacteria 212791
41 Ga0070665_100014395 3300005548 Bacteria 7938
42 Ga0068855_100000467 3300005563 Bacteria 49741
43 Ga0068855_100080463 3300005563 Bacteria 3778
44 Ga0068855_100139260 3300005563 Bacteria 2767
45 Ga0068857_100014354 3300005577 Bacteria 6904
46 Ga0068856_100078815 3300005614 Bacteria 3266
47 Ga0068852_100001411 3300005616 Bacteria 16202
48 Ga0068852_100001453 3300005616 Bacteria 15992
49 Ga0068852_100050697 3300005616 Bacteria 3558
50 Ga0068852_100113440 3300005616 Bacteria 2468
51 Ga0068859_100158355 3300005617 Bacteria 2343
52 Ga0068870_10016334 3300005840 Bacteria 3544
53 Ga0068860_100000041 3300005843 Bacteria 227790
54 Ga0068860_100006898 3300005843 Bacteria 11390
55 Ga0068860_100101223 3300005843 Bacteria 2749
56 Ga0068860_100119253 3300005843 Bacteria 2526
57 Ga0068862_100054908 3300005844 Bacteria 3411
58 Ga0075366_10000884 3300006195 Bacteria 14482
59 Ga0097621_100025665 3300006237 Bacteria 4612
60 Ga0068871_100000305 3300006358 Bacteria 34224
61 Ga0068871_100011553 3300006358 Bacteria 6479
62 Ga0068865_100000049 3300006881 Bacteria 65689
63 Ga0068865_100004554 3300006881 Bacteria 8364
64 Ga0097620_100158354 3300006931 Bacteria 2343
65 Ga0105240_10001715 3300009093 Bacteria 36990
66 Ga0105240_10004199 3300009093 Bacteria 22054
67 Ga0105240_10008201 3300009093 Bacteria 14972
68 Ga0105240_10029628 3300009093 Bacteria 7126
69 Ga0105240_10101988 3300009093 Bacteria 3488
70 Ga0105241_10000591 3300009174 Bacteria 27316
71 Ga0105241_10015931 3300009174 Bacteria 5508
72 Ga0105241_10019026 3300009174 Bacteria 5063
73 Ga0105241_10033762 3300009174 Bacteria 3842
74 Ga0105242_10012108 3300009176 Bacteria 6636
75 Ga0105237_10000849 3300009545 Bacteria 41632
76 Ga0105237_10001602 3300009545 Bacteria 29373
77 Ga0105237_10003251 3300009545 Bacteria 19429
78 Ga0105237_10006791 3300009545 Bacteria 12620
79 Ga0105237_10100701 3300009545 Unclassified 2881
80 Ga0105239_10028204 3300010375 Bacteria 6176
81 Ga0105239_10056679 3300010375 Bacteria 4298
82 Ga0105239_10104947 3300010375 Bacteria 3129
83 Ga0105239_10114296 3300010375 Unclassified 2994
84 Ga0157373_10000496 3300013100 Bacteria 31139
85 Ga0157373_10106524 3300013100 Bacteria 1971
86 Ga0157371_10001816 3300013102 Bacteria 21541
87 Ga0157371_10002119 3300013102 Bacteria 19325
88 Ga0157371_10004102 3300013102 Bacteria 12867
89 Ga0157370_10044788 3300013104 Bacteria 4249
90 Ga0157369_10006899 3300013105 Bacteria 13107
91 Ga0157369_10014778 3300013105 Bacteria 8808
92 Ga0157374_10002821 3300013296 Bacteria 14572
93 Ga0157378_10015678 3300013297 Bacteria 6636
94 Ga0157378_10150069 3300013297 Bacteria 2171
95 Ga0163162_10000263 3300013306 Bacteria 47808
96 Ga0157372_10014617 3300013307 Bacteria 8397
97 Ga0157372_10169950 3300013307 Bacteria 2522
98 Ga0157375_10069752 3300013308 Bacteria 3522
99 Ga0182008_10000009 3300014497 Bacteria 331416
100 Ga0182006_1001856 3300015261 Bacteria 12118
101 Ga0209258_100356 3300025242 Bacteria 62716
102 Ga0209148_1000129 3300025254 Bacteria 175720
103 Ga0209676_1000351 3300025292 Bacteria 87135
104 Ga0207426_1000392 3300025302 Bacteria 74841
105 Ga0207645_10000658 3300025907 Bacteria 28657
106 Ga0207645_10001073 3300025907 Bacteria 22592
107 Ga0207643_10030869 3300025908 Bacteria 2985
108 Ga0207643_10031262 3300025908 Bacteria 2967
109 Ga0207705_10007966 3300025909 Bacteria 7772
110 Ga0207654_10030228 3300025911 Bacteria 2972
111 Ga0207707_10008228 3300025912 Bacteria 9054
112 Ga0207695_10010872 3300025913 Bacteria 11083
113 Ga0207695_10020618 3300025913 Bacteria 7546
114 Ga0207695_10023077 3300025913 Bacteria 7042
115 Ga0207695_10025242 3300025913 Bacteria 6658
116 Ga0207695_10094894 3300025913 Bacteria 2989
117 Ga0207671_10000814 3300025914 Bacteria 39446
118 Ga0207671_10003560 3300025914 Bacteria 15436
119 Ga0207671_10006406 3300025914 Bacteria 10488
120 Ga0207671_10007522 3300025914 Bacteria 9442
121 Ga0207671_10026633 3300025914 Bacteria 4331
122 Ga0207657_10002311 3300025919 Bacteria 20667
123 Ga0207657_10061353 3300025919 Bacteria 3224
124 Ga0207652_10002629 3300025921 Bacteria 15081
125 Ga0207644_10007577 3300025931 Bacteria 7077
126 Ga0207669_10025328 3300025937 Bacteria 3204
127 Ga0207704_10000057 3300025938 Bacteria 78383
128 Ga0207691_10020153 3300025940 Bacteria 6307
129 Ga0207689_10001147 3300025942 Bacteria 25519
130 Ga0207689_10040390 3300025942 Unclassified 3861
131 Ga0207689_10060880 3300025942 Bacteria 3104
132 Ga0207667_10001153 3300025949 Bacteria 33238
133 Ga0207667_10005333 3300025949 Bacteria 15670
134 Ga0207658_10074167 3300025986 Bacteria 2585
135 Ga0207677_10039456 3300026023 Bacteria 3105
136 Ga0207702_10090569 3300026078 Bacteria 2676
137 Ga0207648_10000356 3300026089 Bacteria 50430
138 Ga0207648_10003125 3300026089 Bacteria 17481
139 Ga0207674_10012528 3300026116 Bacteria 9474
140 Ga0207674_10035652 3300026116 Bacteria 5192
141 Ga0207698_10009062 3300026142 Bacteria 6321
142 Ga0207698_10033229 3300026142 Unclassified 3746
143 Ga0207698_10068525 3300026142 Bacteria 2802
144 Ga0268266_10000010 3300028379 Bacteria 1030233
145 Ga0268266_10032929 3300028379 Unclassified 4405
146 Ga0268264_10000252 3300028381 Bacteria 99533
147 Ga0307517_10067666 3300028786 Bacteria 3266
148 Ga0307515_10004651 3300028794 Bacteria 28175
149 Ga0307515_10006611 3300028794 Bacteria 23131
150 Ga0307412_10000084 3300031911 Bacteria 90908
151 Ga0307414_10025368 3300032004 Bacteria 3796
152 Ga0495638_0010115 3300046460 Bacteria 6570
153 Ga0495650_0000110 3300046471 Bacteria 198355
154 Ga0495585_0000136 3300046492 Bacteria 79721
155 Ga0495606_0000002 3300046507 Bacteria 554637
156 Ga0495610_0005699 3300046512 Bacteria 8778
157 Ga0495648_0001386 3300046524 Bacteria 23862
158 Ga0495633_0000043 3300046558 Bacteria 172356
159 Ga0495668_0000073 3300046616 Bacteria 166105
160 Ga0495625_0000013 3300046660 Bacteria 345151
161 Ga0495625_0002630 3300046660 Bacteria 19183
162 Ga0495625_0006296 3300046660 Bacteria 10614
163 Ga0495625_0040484 3300046660 Bacteria 3398
164 Ga0495661_0011937 3300046665 Bacteria 5879
165 Ga0495658_0038581 3300046683 Bacteria 2646
166 Ga0495649_0000010 3300046694 Bacteria 430552
167 Ga0495687_000035 3300047443 Bacteria 255949
168 Ga0501043_0039774 3300049579 Bacteria 3696
169 Ga0501047_0038321 3300049581 Bacteria 4638
170 Ga0501070_0078377 3300049586 Bacteria 2734
171 Ga0501071_0050846 3300049587 Unclassified 2986
172 Ga0501035_0092705 3300049822 Bacteria 2658
173 nmdc:mga0k408_53_c1 3300050493 Bacteria 57877
174 Ga0500578_0000001 3300053086 Bacteria 317120
175 Ga0500644_0000105 3300053088 Bacteria 53242
176 Ga0500651_0000591 3300053093 Bacteria 18214
177 Ga0500562_000131 3300053108 Bacteria 23538
178 Ga0500607_035388 3300053121 Bacteria 2731
179 Ga0500608_000508 3300053122 Bacteria 14533
180 Ga0500618_000010 3300053125 Bacteria 203909
181 Ga0500658_0003208 3300053134 Bacteria 6225
182 Ga0500616_0009369 3300053153 Bacteria 5963
183 Ga0500622_0001658 3300053156 Bacteria 17415
184 Ga0500622_0001853 3300053156 Bacteria 15995
185 Ga0500622_0027175 3300053156 Bacteria 3017
186 Ga0500633_0000926 3300053160 Bacteria 5132
187 Ga0500636_0031676 3300053177 Bacteria 3129
188 Ga0500645_001466 3300053730 Bacteria 11857
189 2522548268 2522125168 Bacteria 7376607
190 2599480925 2599185184 Bacteria 6430550
191 2738762817 2738541284 Bacteria 5199923
192 2776614381 2775506987 Bacteria 5373360
193 2819589456 2818991444 Bacteria 6968812
194 2819679129 2818991460 Bacteria 7595395
195 2883069027 2883068021 Bacteria 6192739
196 2919441765 2919437846 Bacteria 6199444
197 2928080844 2928078545 Bacteria 6534839
198 2928151064 2928147474 Bacteria 6512076
199 2929181758 2929177148 Bacteria 7883697
200 2929245239 2929239360 Bacteria 7745570
201 2945984156 2945977869 Bacteria 7777518
202 2946016451 2946013367 Bacteria 7766675
203 Ga0495585_0007348
204 SwRhRL2b_contig_2682574
205 JGI24739J22299_10002735
206 rootH1_10100969
207 rootH1_10145641
208 rootL2_10001477
209 rootL2_10001896
210 rootH1_10014133
211 Ga0055542_1003071
212 Ga0065165_1000060
213 Ga0065714_10002620
214 Ga0065704_10070286
215 Ga0065704_10088622
216 Ga0070658_10102010
217 Ga0070676_10001384
218 Ga0070683_100038916
219 Ga0068869_100077884
220 Ga0070666_10006867
221 Ga0070666_10026579
222 Ga0070680_100043326
223 Ga0070680_100085172
224 Ga0068868_100002856
225 Ga0068868_100092230
226 Ga0070660_100004164
227 Ga0070668_100000373
228 Ga0070668_100002123
229 Ga0070669_100050640
230 Ga0070671_100019509
231 Ga0070671_100030442
232 Ga0070674_100002657
233 Ga0070673_100000503
234 Ga0070667_100043472
235 Ga0070681_10176569
236 Ga0068867_100002130
237 Ga0068867_100006388
238 Ga0070679_100033758
239 Ga0070679_100106376
240 Ga0068853_100005707
241 Ga0068853_100067511
242 Ga0070665_100000066
243 Ga0070665_100014395
244 Ga0068855_100000467
245 Ga0068855_100080463
246 Ga0068855_100139260
247 Ga0068857_100014354
248 Ga0068856_100078815
249 Ga0068852_100001411
250 Ga0068852_100001453
251 Ga0068852_100050697
252 Ga0068852_100113440
253 Ga0068859_100158355
254 Ga0068870_10016334
255 Ga0068860_100000041
256 Ga0068860_100006898
257 Ga0068860_100101223
258 Ga0068860_100119253
259 Ga0068862_100054908
260 Ga0075366_10000884
261 Ga0097621_100025665
262 Ga0068871_100000305
263 Ga0068871_100011553
264 Ga0068865_100000049
265 Ga0068865_100004554
266 Ga0097620_100158354
267 Ga0105240_10001715
268 Ga0105240_10004199
269 Ga0105240_10008201
270 Ga0105240_10029628
271 Ga0105240_10101988
272 Ga0105241_10000591
273 Ga0105241_10015931
274 Ga0105241_10019026
275 Ga0105241_10033762
276 Ga0105242_10012108
277 Ga0105237_10000849
278 Ga0105237_10001602
279 Ga0105237_10003251
280 Ga0105237_10006791
281 Ga0105237_10100701
282 Ga0105239_10028204
283 Ga0105239_10056679
284 Ga0105239_10104947
285 Ga0105239_10114296
286 Ga0157373_10000496
287 Ga0157373_10106524
288 Ga0157371_10001816
289 Ga0157371_10002119
290 Ga0157371_10004102
291 Ga0157370_10044788
292 Ga0157369_10006899
293 Ga0157369_10014778
294 Ga0157374_10002821
295 Ga0157378_10015678
296 Ga0157378_10150069
297 Ga0163162_10000263
298 Ga0157372_10014617
299 Ga0157372_10169950
300 Ga0157375_10069752
301 Ga0182008_10000009
302 Ga0182006_1001856
303 Ga0209258_100356
304 Ga0209148_1000129
305 Ga0209676_1000351
306 Ga0207426_1000392
307 Ga0207645_10000658
308 Ga0207645_10001073
309 Ga0207643_10030869
310 Ga0207643_10031262
311 Ga0207705_10007966
312 Ga0207654_10030228
313 Ga0207707_10008228
314 Ga0207695_10010872
315 Ga0207695_10020618
316 Ga0207695_10023077
317 Ga0207695_10025242
318 Ga0207695_10094894
319 Ga0207671_10000814
320 Ga0207671_10003560
321 Ga0207671_10006406
322 Ga0207671_10007522
323 Ga0207671_10026633
324 Ga0207657_10002311
325 Ga0207657_10061353
326 Ga0207652_10002629
327 Ga0207644_10007577
328 Ga0207669_10025328
329 Ga0207704_10000057
330 Ga0207691_10020153
331 Ga0207689_10001147
332 Ga0207689_10040390
333 Ga0207689_10060880
334 Ga0207667_10001153
335 Ga0207667_10005333
336 Ga0207658_10074167
337 Ga0207677_10039456
338 Ga0207702_10090569
339 Ga0207648_10000356
340 Ga0207648_10003125
341 Ga0207674_10012528
342 Ga0207674_10035652
343 Ga0207698_10009062
344 Ga0207698_10033229
345 Ga0207698_10068525
346 Ga0268266_10000010
347 Ga0268266_10032929
348 Ga0268264_10000252
349 Ga0307517_10067666
350 Ga0307515_10004651
351 Ga0307515_10006611
352 Ga0307412_10000084
353 Ga0307414_10025368
354 Ga0495638_0010115
355 Ga0495650_0000110
356 Ga0495585_0000136
357 Ga0495606_0000002
358 Ga0495610_0005699
359 Ga0495648_0001386
360 Ga0495633_0000043
361 Ga0495668_0000073
362 Ga0495625_0000013
363 Ga0495625_0002630
364 Ga0495625_0006296
365 Ga0495625_0040484
366 Ga0495661_0011937
367 Ga0495658_0038581
368 Ga0495649_0000010
369 Ga0495687_000035
370 Ga0501043_0039774
371 Ga0501047_0038321
372 Ga0501070_0078377
373 Ga0501071_0050846
374 Ga0501035_0092705
375 nmdc:mga0k408_53_c1
376 Ga0500578_0000001
377 Ga0500644_0000105
378 Ga0500651_0000591
379 Ga0500562_000131
380 Ga0500607_035388
381 Ga0500608_000508
382 Ga0500618_000010
383 Ga0500658_0003208
384 Ga0500616_0009369
385 Ga0500622_0001658
386 Ga0500622_0001853
387 Ga0500622_0027175
388 Ga0500633_0000926
389 Ga0500636_0031676
390 Ga0500645_001466
391 2522548268
392 2599480925
393 2738762817
394 2776614381
395 2819589456
396 2819679129
397 2883069027
398 2919441765
399 2928080844
400 2928151064
401 2929181758
402 2929245239
403 2945984156
404 2946016451

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14606

Lipase_GDSL_3

GDSL-like Lipase/Acylhydrolase family

212

392

0.98

PF14607

GxDLY

N-terminus of Esterase_SGNH_hydro-type

52

204

0.97

PF13472

Lipase_GDSL_2

GDSL-like Lipase/Acylhydrolase family

438

603

0.87

PF00657

Lipase_GDSL

GDSL-like Lipase/Acylhydrolase

436

608

0.76

PF13472

Lipase_GDSL_2

GDSL-like Lipase/Acylhydrolase family

217

382

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lhs-assembly1.cif.gz_A-2 crystal structure of a putative gdsl-like lipase (bacova_00914) from bacteroides ovatus atcc 8483 at 1.40 a resolution 0.9279 26 366
4lhs-assembly1.cif.gz_A-2 crystal structure of a putative gdsl-like lipase (bacova_00914) from bacteroides ovatus atcc 8483 at 1.40 a resolution 0.9094 26 366
1es9-assembly1.cif.gz_A-2 x-ray crystal structure of r22k mutant of the mammalian brain platelet-activating factor acetylhydrolases (paf-ah) 0.8869 374 585
3dt9-assembly1.cif.gz_A crystal structure of bovin brain platelet activating factor acetylhydrolase covalently inhibited by soman 0.8766 374 585
1wab-assembly1.cif.gz_A platelet-activating factor acetylhydrolase 0.8738 374 585
ID Description Score Start End Superfamily
4lhsA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.9135 183 366 3.40.50.1110
af_O35264_1_229_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8809 374 585 3.40.50.1110
4lhsA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8805 183 366 3.40.50.1110
4lhsA01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8802 26 176 2.60.120.260
af_Q9VXP4_1_222_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.8573 377 585 3.40.50.1110
ID Description Score Start End GO Terms
AF-C6Y1Z6-F1-model_v4 Uncharacterized protein 0.9905 25 364
AF-A0A4Q3PCT0-F1-model_v4 deleted 0.9867 444 577
AF-A0A318HTH2-F1-model_v4 Lysophospholipase L1-like esterase 0.9824 26 583 GO:0004622
AF-A0A6M1E9H6-F1-model_v4 Hydrolase 0.982 26 366
AF-A0A4Q5RXW2-F1-model_v4 Acetylhydrolase 0.982 26 316 GO:0016787

Map