F310366
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 202 | 154 | 195 | 595 |
Family's Representative Sequence
| Representative Sequence | 3300048915|Ga0496112_0039330|Ga0496112_0039330_1851_3722 |
| Length | 623 |
| Sequence | MKTRILSRARGGERASHRSLRAVSRGTVIAGIAVAAWLLPYGLDPYTIHVVDVTLLFALLALGFGLAMGIAGQINLAQIAFFGVAAYATAILTTRSGLGFWTAAVIALVIAAAVGLLVGTTALRIQSHYLGIVTLGLALAFTNWVTNAEIAGGAEGITAIPVPTLPGIDLSSEYLYYYLELIVFAGSLVFGLFVVHTPLGRRMRAMRDDSLAAGAVGVEVPLLRMTAFLLAGVYGGLAGVLYAGLIRYVAPDSFNIATMFLVLAMVIIGGRQSLIGCVIGAFALAIVRGLLVDYPTYAQVIYGSIVVIIVVFFPSGLAGLPHQLRPLLRRFGWSRGPTVAAPVLGPFQPYEAGPPVATDELLLRVDGVSMRFRGLKALQDVSLAVAPGEIRGIVGPNGSGKTTLFNVVSGLYRPSAGRVFVAGQDLTAARPYRLAQAGIARTFQNLRLFPALTVRENVLVALDRTRLWWSWRYAVWPVGVWRQDRDLRRRGDEVLARFGLTAFADLRPAALPYGTQRRVEIARAMAARPRLLLLDEPAAGLNGEEVRQLGEIVRSIRDSGTTVVIIEHNMSLVMSLCERITVLASGAVIAEGQPVEVARAPQVIEAYLGDSAMSEDVPVEAVS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221632 | Leifsonia sp. Root112D2 | Isolate | Unclassified |
| 2 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 3 | 2791354901 | Actinophytocola xanthii 11-183 | Isolate | Rhizosphere |
| 4 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 5 | 2895427314 | Nonomuraea sp. PA05 | Isolate | Unclassified |
| 6 | 3002998708 | Actinomadura barringtoniae GKU 128 | Isolate | Unclassified |
| 7 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 8 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 11 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 13 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 25 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 26 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 29 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 30 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 33 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 35 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 36 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 37 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 38 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 39 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 40 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 41 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 42 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 43 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 45 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 46 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 47 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 54 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 55 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 76 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 77 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 78 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 79 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 80 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 81 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 82 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 83 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 84 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 85 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 86 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 87 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 88 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 89 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 90 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 91 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 92 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 93 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 94 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 95 | 3300031889 | Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO | Metagenome | Rhizosphere |
| 96 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 97 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 98 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 99 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 100 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 101 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 102 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 103 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 104 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 105 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 106 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 107 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 108 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 109 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 110 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 111 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 112 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 113 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 114 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 115 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 139 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 140 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 141 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 142 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 143 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 146 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 149 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 150 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 151 | 3300053098 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere | Metagenome | Endosphere |
| 152 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 153 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 154 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.54 |
| Metatranscriptomes | 0.99 |
| Isolates | 3.47 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.97 |
| Nodule | 0 |
| Rhizoplane | 2.97 |
| Rhizosphere | 83.66 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 10.4 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10002761 | 3300003203 | Bacteria | 8252 |
| 2 | JGI25406J46586_10002989 | 3300003203 | Bacteria | 7986 |
| 3 | JGI25406J46586_10012021 | 3300003203 | Bacteria | 3772 |
| 4 | Ga0070658_10001176 | 3300005327 | Bacteria | 22362 |
| 5 | Ga0070658_10007242 | 3300005327 | Bacteria | 8954 |
| 6 | Ga0070658_10055017 | 3300005327 | Bacteria | 3232 |
| 7 | Ga0070683_100022686 | 3300005329 | Bacteria | 5614 |
| 8 | Ga0070683_100185855 | 3300005329 | Bacteria | 1973 |
| 9 | Ga0068869_100001227 | 3300005334 | Bacteria | 15095 |
| 10 | Ga0070680_100010645 | 3300005336 | Bacteria | 7095 |
| 11 | Ga0068868_100088600 | 3300005338 | Bacteria | 2491 |
| 12 | Ga0070661_100009181 | 3300005344 | Bacteria | 6837 |
| 13 | Ga0070661_100030218 | 3300005344 | Bacteria | 3913 |
| 14 | Ga0070692_10004782 | 3300005345 | Bacteria | 5690 |
| 15 | Ga0070659_100033542 | 3300005366 | Bacteria | 3988 |
| 16 | Ga0070703_10018072 | 3300005406 | Bacteria | 2035 |
| 17 | Ga0070714_100007753 | 3300005435 | Bacteria | 8365 |
| 18 | Ga0070713_100002173 | 3300005436 | Bacteria | 12693 |
| 19 | Ga0070710_10070724 | 3300005437 | Bacteria | 2010 |
| 20 | Ga0070701_10010549 | 3300005438 | Bacteria | 4089 |
| 21 | Ga0070705_100018988 | 3300005440 | Bacteria | 3612 |
| 22 | Ga0070700_100011124 | 3300005441 | Bacteria | 4979 |
| 23 | Ga0070708_100004618 | 3300005445 | Bacteria | 10845 |
| 24 | Ga0070681_10004481 | 3300005458 | Bacteria | 13319 |
| 25 | Ga0070681_10073034 | 3300005458 | Bacteria | 3392 |
| 26 | Ga0068867_100057142 | 3300005459 | Bacteria | 2889 |
| 27 | Ga0070706_100004294 | 3300005467 | Bacteria | 13804 |
| 28 | Ga0070698_100021194 | 3300005471 | Bacteria | 6810 |
| 29 | Ga0070679_100000682 | 3300005530 | Bacteria | 29067 |
| 30 | Ga0070679_100085195 | 3300005530 | Bacteria | 3147 |
| 31 | Ga0070679_100106690 | 3300005530 | Bacteria | 2787 |
| 32 | Ga0070684_100017595 | 3300005535 | Bacteria | 5872 |
| 33 | Ga0070684_100032328 | 3300005535 | Bacteria | 4459 |
| 34 | Ga0070684_100034046 | 3300005535 | Bacteria | 4354 |
| 35 | Ga0070695_100016619 | 3300005545 | Bacteria | 4457 |
| 36 | Ga0070696_100037942 | 3300005546 | Bacteria | 3324 |
| 37 | Ga0070696_100049527 | 3300005546 | Bacteria | 2918 |
| 38 | Ga0068855_100010347 | 3300005563 | Bacteria | 11250 |
| 39 | Ga0070664_100007836 | 3300005564 | Bacteria | 8625 |
| 40 | Ga0068857_100006321 | 3300005577 | Bacteria | 10143 |
| 41 | Ga0068857_100027313 | 3300005577 | Bacteria | 5034 |
| 42 | Ga0068856_100111015 | 3300005614 | Bacteria | 2739 |
| 43 | Ga0068864_100003337 | 3300005618 | Bacteria | 13273 |
| 44 | Ga0068863_100039557 | 3300005841 | Bacteria | 4485 |
| 45 | Ga0068858_100131099 | 3300005842 | Bacteria | 2351 |
| 46 | Ga0068862_100054528 | 3300005844 | Bacteria | 3423 |
| 47 | Ga0081455_10000702 | 3300005937 | Bacteria | 43495 |
| 48 | Ga0081455_10057160 | 3300005937 | Bacteria | 3307 |
| 49 | Ga0081540_1014078 | 3300005983 | Bacteria | 5153 |
| 50 | Ga0081539_10000032 | 3300005985 | Bacteria | 311452 |
| 51 | Ga0081539_10000574 | 3300005985 | Bacteria | 75794 |
| 52 | Ga0081539_10000984 | 3300005985 | Bacteria | 53064 |
| 53 | Ga0070717_10001811 | 3300006028 | Bacteria | 14931 |
| 54 | Ga0070717_10069940 | 3300006028 | Bacteria | 2924 |
| 55 | Ga0075428_100107826 | 3300006844 | Bacteria | 3035 |
| 56 | Ga0075430_100037810 | 3300006846 | Bacteria | 4091 |
| 57 | Ga0075430_100075618 | 3300006846 | Bacteria | 2823 |
| 58 | Ga0075429_100002711 | 3300006880 | Bacteria | 14934 |
| 59 | Ga0111539_10002276 | 3300009094 | Bacteria | 25548 |
| 60 | Ga0111539_10013655 | 3300009094 | Bacteria | 10144 |
| 61 | Ga0105245_10066441 | 3300009098 | Bacteria | 3264 |
| 62 | Ga0114129_10000097 | 3300009147 | Bacteria | 84669 |
| 63 | Ga0114129_10001818 | 3300009147 | Bacteria | 29079 |
| 64 | Ga0114129_10014465 | 3300009147 | Bacteria | 11244 |
| 65 | Ga0157369_10040611 | 3300013105 | Bacteria | 5079 |
| 66 | Ga0157369_10041100 | 3300013105 | Bacteria | 5048 |
| 67 | Ga0163163_10012992 | 3300014325 | Bacteria | 7606 |
| 68 | Ga0157377_10042961 | 3300014745 | Bacteria | 2513 |
| 69 | Ga0206353_10692019 | 3300020082 | Bacteria | 6478 |
| 70 | Ga0206353_11944179 | 3300020082 | Bacteria | 2803 |
| 71 | Ga0213875_10000270 | 3300021388 | Bacteria | 51316 |
| 72 | Ga0207653_10000347 | 3300025885 | Bacteria | 23308 |
| 73 | Ga0207705_10007784 | 3300025909 | Bacteria | 7869 |
| 74 | Ga0207705_10055841 | 3300025909 | Bacteria | 2847 |
| 75 | Ga0207660_10018876 | 3300025917 | Bacteria | 4604 |
| 76 | Ga0207652_10161147 | 3300025921 | Bacteria | 2011 |
| 77 | Ga0207700_10038655 | 3300025928 | Bacteria | 3465 |
| 78 | Ga0207664_10023252 | 3300025929 | Bacteria | 4641 |
| 79 | Ga0207664_10025882 | 3300025929 | Bacteria | 4427 |
| 80 | Ga0207664_10063255 | 3300025929 | Bacteria | 2957 |
| 81 | Ga0207706_10069099 | 3300025933 | Bacteria | 3107 |
| 82 | Ga0207711_10026278 | 3300025941 | Bacteria | 4884 |
| 83 | Ga0207689_10006333 | 3300025942 | Bacteria | 10483 |
| 84 | Ga0207661_10030183 | 3300025944 | Bacteria | 4172 |
| 85 | Ga0207661_10035526 | 3300025944 | Bacteria | 3884 |
| 86 | Ga0207679_10016442 | 3300025945 | Bacteria | 4914 |
| 87 | Ga0207679_10027780 | 3300025945 | Bacteria | 3918 |
| 88 | Ga0207667_10015542 | 3300025949 | Bacteria | 8640 |
| 89 | Ga0207677_10005116 | 3300026023 | Bacteria | 7095 |
| 90 | Ga0207703_10085423 | 3300026035 | Bacteria | 2641 |
| 91 | Ga0207678_10009080 | 3300026067 | Bacteria | 8753 |
| 92 | Ga0207678_10035682 | 3300026067 | Bacteria | 4329 |
| 93 | Ga0207708_10039672 | 3300026075 | Bacteria | 3589 |
| 94 | Ga0207648_10063456 | 3300026089 | Bacteria | 3220 |
| 95 | Ga0207674_10004560 | 3300026116 | Bacteria | 16639 |
| 96 | Ga0207674_10006766 | 3300026116 | Bacteria | 13453 |
| 97 | Ga0207674_10026488 | 3300026116 | Bacteria | 6154 |
| 98 | Ga0207698_10067699 | 3300026142 | Bacteria | 2817 |
| 99 | Ga0268265_10009000 | 3300028380 | Bacteria | 6754 |
| 100 | Ga0265337_1000042 | 3300028556 | Bacteria | 56158 |
| 101 | Ga0265326_10001998 | 3300028558 | Bacteria | 6976 |
| 102 | Ga0265319_1000430 | 3300028563 | Bacteria | 30227 |
| 103 | Ga0265334_10000240 | 3300028573 | Bacteria | 31643 |
| 104 | Ga0265336_10003976 | 3300028666 | Bacteria | 5661 |
| 105 | Ga0307515_10000060 | 3300028794 | Bacteria | 254768 |
| 106 | Ga0307515_10005389 | 3300028794 | Bacteria | 25924 |
| 107 | Ga0307515_10041920 | 3300028794 | Bacteria | 7180 |
| 108 | Ga0265338_10000890 | 3300028800 | Bacteria | 50312 |
| 109 | Ga0265324_10004157 | 3300029957 | Bacteria | 6619 |
| 110 | Ga0307512_10002928 | 3300030522 | Bacteria | 20643 |
| 111 | Ga0307512_10005182 | 3300030522 | Bacteria | 13752 |
| 112 | Ga0265332_10008952 | 3300031238 | Bacteria | 4476 |
| 113 | Ga0265320_10017080 | 3300031240 | Bacteria | 4041 |
| 114 | Ga0265340_10012496 | 3300031247 | Bacteria | 4482 |
| 115 | Ga0265316_10012709 | 3300031344 | Bacteria | 7530 |
| 116 | Ga0307513_10006193 | 3300031456 | Bacteria | 15682 |
| 117 | Ga0307513_10072833 | 3300031456 | Bacteria | 3579 |
| 118 | Ga0307513_10078557 | 3300031456 | Bacteria | 3413 |
| 119 | Ga0265313_10004362 | 3300031595 | Bacteria | 10917 |
| 120 | Ga0307508_10001385 | 3300031616 | Bacteria | 27340 |
| 121 | Ga0265314_10002347 | 3300031711 | Bacteria | 19533 |
| 122 | Ga0265342_10011526 | 3300031712 | Bacteria | 6044 |
| 123 | Ga0307516_10016651 | 3300031730 | Bacteria | 7680 |
| 124 | Ga0307516_10059917 | 3300031730 | Bacteria | 3700 |
| 125 | Ga0307405_10027354 | 3300031731 | Bacteria | 3305 |
| 126 | Ga0326468_10000243 | 3300031889 | Bacteria | 5704 |
| 127 | Ga0307406_10050167 | 3300031901 | Bacteria | 2644 |
| 128 | Ga0307409_100081109 | 3300031995 | Bacteria | 2621 |
| 129 | Ga0307415_100013203 | 3300032126 | Bacteria | 4814 |
| 130 | Ga0307415_100055214 | 3300032126 | Bacteria | 2716 |
| 131 | Ga0307507_10001937 | 3300033179 | Bacteria | 45000 |
| 132 | Ga0373926_0001319 | 3300035083 | Bacteria | 7489 |
| 133 | Ga0373944_0000303 | 3300035089 | Bacteria | 10983 |
| 134 | Ga0373951_0000081 | 3300035091 | Bacteria | 37714 |
| 135 | Ga0373936_0000160 | 3300035113 | Bacteria | 22430 |
| 136 | Ga0373946_0018692 | 3300035171 | Bacteria | 2663 |
| 137 | Ga0373942_0001039 | 3300035207 | Bacteria | 7508 |
| 138 | Ga0373927_0001329 | 3300035695 | Bacteria | 18644 |
| 139 | Ga0373933_0040261 | 3300035724 | Bacteria | 2752 |
| 140 | Ga0373925_0026629 | 3300037068 | Bacteria | 4231 |
| 141 | Ga0395900_0038065 | 3300037418 | Bacteria | 4959 |
| 142 | Ga0395898_0040731 | 3300037466 | Bacteria | 4592 |
| 143 | Ga0436364_0212146 | 3300037853 | Bacteria | 5469 |
| 144 | Ga0436364_0585394 | 3300037853 | Bacteria | 27480 |
| 145 | Ga0436365_1399665 | 3300039437 | Bacteria | 4754 |
| 146 | Ga0439448_0008636 | 3300042005 | Bacteria | 2983 |
| 147 | Ga0466967_0059265 | 3300045976 | Bacteria | 3388 |
| 148 | Ga0495629_0000252 | 3300046459 | Bacteria | 46609 |
| 149 | Ga0495641_0019849 | 3300046461 | Bacteria | 3426 |
| 150 | Ga0495651_0076610 | 3300046462 | Bacteria | 2533 |
| 151 | Ga0495651_0095154 | 3300046462 | Bacteria | 2228 |
| 152 | Ga0495653_0003289 | 3300046463 | Bacteria | 12970 |
| 153 | Ga0495582_0025504 | 3300046473 | Bacteria | 3239 |
| 154 | Ga0495664_0000074 | 3300046477 | Bacteria | 48269 |
| 155 | Ga0495664_0002044 | 3300046477 | Bacteria | 10792 |
| 156 | Ga0495630_0010928 | 3300046517 | Bacteria | 6559 |
| 157 | Ga0495652_0016191 | 3300046529 | Bacteria | 6667 |
| 158 | Ga0495640_0036774 | 3300046533 | Bacteria | 3457 |
| 159 | Ga0495587_0000921 | 3300046536 | Bacteria | 19411 |
| 160 | Ga0495634_0000126 | 3300046642 | Bacteria | 65545 |
| 161 | Ga0495635_0003543 | 3300046663 | Bacteria | 10807 |
| 162 | Ga0495635_0012475 | 3300046663 | Bacteria | 5953 |
| 163 | Ga0495635_0017576 | 3300046663 | Bacteria | 4994 |
| 164 | Ga0495657_0003759 | 3300046675 | Bacteria | 12283 |
| 165 | Ga0495657_0059652 | 3300046675 | Bacteria | 2530 |
| 166 | Ga0495646_0011336 | 3300046680 | Bacteria | 5661 |
| 167 | Ga0495624_0003737 | 3300046690 | Bacteria | 11248 |
| 168 | Ga0495600_0000831 | 3300046809 | Bacteria | 16432 |
| 169 | Ga0495604_0000268 | 3300047317 | Bacteria | 46321 |
| 170 | Ga0495674_0000062 | 3300047319 | Bacteria | 72134 |
| 171 | Ga0495676_0008222 | 3300047321 | Bacteria | 9570 |
| 172 | Ga0495675_0056718 | 3300047444 | Bacteria | 2484 |
| 173 | Ga0495684_0009928 | 3300047471 | Bacteria | 7350 |
| 174 | Ga0495593_0031654 | 3300047673 | Bacteria | 2888 |
| 175 | Ga0495614_0000520 | 3300048089 | Bacteria | 15847 |
| 176 | Ga0496104_0007298 | 3300048907 | Bacteria | 9753 |
| 177 | Ga0496108_0000003 | 3300048911 | Bacteria | 595687 |
| 178 | Ga0496108_0134575 | 3300048911 | Bacteria | 2125 |
| 179 | Ga0496111_0057958 | 3300048914 | Bacteria | 2804 |
| 180 | Ga0496112_0039330 | 3300048915 | Bacteria | 4622 |
| 181 | Ga0496112_0089426 | 3300048915 | Bacteria | 3047 |
| 182 | Ga0496126_0017701 | 3300048929 | Bacteria | 7097 |
| 183 | Ga0501047_0002376 | 3300049581 | Bacteria | 17998 |
| 184 | nmdc:mga05p37_11984_c1 | 3300050507 | Bacteria | 10344 |
| 185 | nmdc:mga09592_10021_c1 | 3300050508 | Bacteria | 7705 |
| 186 | nmdc:mga09592_8420_c1 | 3300050508 | Bacteria | 8385 |
| 187 | nmdc:mga0qj67_31208_c1 | 3300050509 | Bacteria | 4150 |
| 188 | nmdc:mga08y16_52734_c1 | 3300050511 | Bacteria | 4255 |
| 189 | nmdc:mga0n895_10719_c1 | 3300050512 | Bacteria | 8122 |
| 190 | Ga0500646_0000821 | 3300053090 | Bacteria | 8606 |
| 191 | Ga0500641_0041855 | 3300053096 | Bacteria | 1854 |
| 192 | Ga0500650_0021346 | 3300053098 | Bacteria | 2852 |
| 193 | Ga0500594_0010163 | 3300053118 | Bacteria | 2179 |
| 194 | Ga0500616_0000095 | 3300053153 | Bacteria | 180630 |
| 195 | Ga0500616_0023217 | 3300053153 | Bacteria | 3456 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046533 | Ga0495640_0036774 | Ga0495640_0036774_1271_2800 | 491 |
| 2 | 3300035171 | Ga0373946_0018692 | Ga0373946_0018692_10_1518 | 498 |
| 3 | 3300053096 | Ga0500641_0041855 | Ga0500641_0041855_147_1835 | 524 |
| 4 | 3300050512 | nmdc:mga0n895_10719_c1 | nmdc:mga0n895_10719_c1_656_2458 | 540 |
| 5 | 3300005329 | Ga0070683_100185855 | Ga0070683_1001858551 | 543 |
| 6 | 3300005614 | Ga0068856_100111015 | Ga0068856_1001110152 | 543 |
| 7 | 3300005618 | Ga0068864_100003337 | Ga0068864_1000033374 | 543 |
| 8 | 3300005841 | Ga0068863_100039557 | Ga0068863_1000395574 | 543 |
| 9 | 3300005842 | Ga0068858_100131099 | Ga0068858_1001310992 | 543 |
| 10 | 3300025941 | Ga0207711_10026278 | Ga0207711_100262783 | 543 |
| 11 | 3300048907 | Ga0496104_0007298 | Ga0496104_0007298_761_2581 | 543 |
| 12 | 3300048911 | Ga0496108_0134575 | Ga0496108_0134575_64_1884 | 543 |
| 13 | 3300048914 | Ga0496111_0057958 | Ga0496111_0057958_921_2741 | 543 |
| 14 | 3300048915 | Ga0496112_0089426 | Ga0496112_0089426_65_1885 | 543 |
| 15 | 3300006844 | Ga0075428_100107826 | Ga0075428_1001078262 | 545 |
| 16 | 3300009094 | Ga0111539_10013655 | Ga0111539_100136554 | 545 |
| 17 | 3300039437 | Ga0436365_1399665 | Ga0436365_1399665_2886_4694 | 545 |
| 18 | 3300050511 | nmdc:mga08y16_52734_c1 | nmdc:mga08y16_52734_c1_1225_3084 | 545 |
| 19 | 3300028794 | Ga0307515_10005389 | Ga0307515_100053898 | 556 |
| 20 | 3300030522 | Ga0307512_10002928 | Ga0307512_100029286 | 556 |
| 21 | 3300031456 | Ga0307513_10072833 | Ga0307513_100728332 | 556 |
| 22 | 3300031616 | Ga0307508_10001385 | Ga0307508_1000138524 | 556 |
| 23 | 3300053098 | Ga0500650_0021346 | Ga0500650_0021346_207_2003 | 556 |
| 24 | 3300053118 | Ga0500594_0010163 | Ga0500594_0010163_126_1922 | 556 |
| 25 | 3300037853 | Ga0436364_0212146 | Ga0436364_0212146_3483_5327 | 563 |
| 26 | 3300031456 | Ga0307513_10006193 | Ga0307513_1000619312 | 565 |
| 27 | 3300053090 | Ga0500646_0000821 | Ga0500646_0000821_5847_7670 | 568 |
| 28 | 3300014745 | Ga0157377_10042961 | Ga0157377_100429612 | 569 |
| 29 | 3300053153 | Ga0500616_0023217 | Ga0500616_0023217_907_2712 | 571 |
| 30 | 3300005327 | Ga0070658_10055017 | Ga0070658_100550171 | 575 |
| 31 | 3300005530 | Ga0070679_100085195 | Ga0070679_1000851953 | 575 |
| 32 | 3300020082 | Ga0206353_10692019 | Ga0206353_106920193 | 575 |
| 33 | 3300025909 | Ga0207705_10055841 | Ga0207705_100558412 | 575 |
| 34 | 3300042005 | Ga0439448_0008636 | Ga0439448_0008636_548_2365 | 575 |
| 35 | 3300005327 | Ga0070658_10007242 | Ga0070658_100072427 | 576 |
| 36 | 3300005563 | Ga0068855_100010347 | Ga0068855_1000103476 | 576 |
| 37 | 3300025949 | Ga0207667_10015542 | Ga0207667_100155428 | 576 |
| 38 | 3300005329 | Ga0070683_100022686 | Ga0070683_1000226864 | 577 |
| 39 | 3300005336 | Ga0070680_100010645 | Ga0070680_1000106456 | 577 |
| 40 | 3300005458 | Ga0070681_10004481 | Ga0070681_100044814 | 577 |
| 41 | 3300005530 | Ga0070679_100000682 | Ga0070679_1000006827 | 577 |
| 42 | 3300005535 | Ga0070684_100032328 | Ga0070684_1000323283 | 577 |
| 43 | 3300013105 | Ga0157369_10041100 | Ga0157369_100411002 | 577 |
| 44 | 3300025944 | Ga0207661_10035526 | Ga0207661_100355262 | 577 |
| 45 | 3300026142 | Ga0207698_10067699 | Ga0207698_100676992 | 577 |
| 46 | 3300005937 | Ga0081455_10000702 | Ga0081455_100007026 | 578 |
| 47 | 3300035091 | Ga0373951_0000081 | Ga0373951_0000081_14148_15935 | 578 |
| 48 | 3300005338 | Ga0068868_100088600 | Ga0068868_1000886002 | 580 |
| 49 | 3300005406 | Ga0070703_10018072 | Ga0070703_100180722 | 580 |
| 50 | 3300005438 | Ga0070701_10010549 | Ga0070701_100105494 | 580 |
| 51 | 3300005440 | Ga0070705_100018988 | Ga0070705_1000189883 | 580 |
| 52 | 3300005445 | Ga0070708_100004618 | Ga0070708_1000046185 | 580 |
| 53 | 3300005458 | Ga0070681_10073034 | Ga0070681_100730342 | 580 |
| 54 | 3300005459 | Ga0068867_100057142 | Ga0068867_1000571422 | 580 |
| 55 | 3300005467 | Ga0070706_100004294 | Ga0070706_1000042945 | 580 |
| 56 | 3300005471 | Ga0070698_100021194 | Ga0070698_1000211944 | 580 |
| 57 | 3300005530 | Ga0070679_100106690 | Ga0070679_1001066902 | 580 |
| 58 | 3300005545 | Ga0070695_100016619 | Ga0070695_1000166192 | 580 |
| 59 | 3300005546 | Ga0070696_100037942 | Ga0070696_1000379422 | 580 |
| 60 | 3300005546 | Ga0070696_100049527 | Ga0070696_1000495272 | 580 |
| 61 | 3300005577 | Ga0068857_100006321 | Ga0068857_1000063214 | 580 |
| 62 | 3300006028 | Ga0070717_10001811 | Ga0070717_100018119 | 580 |
| 63 | 3300025885 | Ga0207653_10000347 | Ga0207653_1000034711 | 580 |
| 64 | 3300025917 | Ga0207660_10018876 | Ga0207660_100188762 | 580 |
| 65 | 3300026035 | Ga0207703_10085423 | Ga0207703_100854232 | 580 |
| 66 | 3300026089 | Ga0207648_10063456 | Ga0207648_100634563 | 580 |
| 67 | 3300026116 | Ga0207674_10006766 | Ga0207674_100067667 | 580 |
| 68 | 3300005937 | Ga0081455_10057160 | Ga0081455_100571602 | 582 |
| 69 | 3300048929 | Ga0496126_0017701 | Ga0496126_0017701_1773_3593 | 582 |
| 70 | 3300006846 | Ga0075430_100037810 | Ga0075430_1000378102 | 583 |
| 71 | 3300009147 | Ga0114129_10001818 | Ga0114129_1000181825 | 584 |
| 72 | 3300046462 | Ga0495651_0076610 | Ga0495651_0076610_174_1994 | 584 |
| 73 | 3300050508 | nmdc:mga09592_10021_c1 | nmdc:mga09592_10021_c1_2392_4221 | 584 |
| 74 | 3300021388 | Ga0213875_10000270 | Ga0213875_1000027013 | 585 |
| 75 | 3300025928 | Ga0207700_10038655 | Ga0207700_100386553 | 585 |
| 76 | 3300025929 | Ga0207664_10025882 | Ga0207664_100258824 | 585 |
| 77 | 3300037853 | Ga0436364_0585394 | Ga0436364_0585394_12715_14502 | 585 |
| 78 | iso_pu_bacteria | 2751185782 | 2753271129 | 585 |
| 79 | 3300006028 | Ga0070717_10069940 | Ga0070717_100699402 | 586 |
| 80 | 3300025929 | Ga0207664_10063255 | Ga0207664_100632552 | 586 |
| 81 | 3300031889 | Ga0326468_10000243 | Ga0326468_100002433 | 586 |
| 82 | 3300032126 | Ga0307415_100055214 | Ga0307415_1000552142 | 586 |
| 83 | 3300053153 | Ga0500616_0000095 | Ga0500616_0000095_84558_86363 | 586 |
| 84 | iso_pu_bacteria | 8055066027 | 8055071625 | 587 |
| 85 | 3300035724 | Ga0373933_0040261 | Ga0373933_0040261_543_2363 | 588 |
| 86 | 3300046473 | Ga0495582_0025504 | Ga0495582_0025504_165_1988 | 588 |
| 87 | 3300046663 | Ga0495635_0017576 | Ga0495635_0017576_2805_4625 | 588 |
| 88 | 3300047444 | Ga0495675_0056718 | Ga0495675_0056718_616_2436 | 588 |
| 89 | 3300005435 | Ga0070714_100007753 | Ga0070714_1000077535 | 589 |
| 90 | 3300005436 | Ga0070713_100002173 | Ga0070713_10000217310 | 589 |
| 91 | 3300025929 | Ga0207664_10023252 | Ga0207664_100232523 | 589 |
| 92 | 3300028556 | Ga0265337_1000042 | Ga0265337_100004215 | 589 |
| 93 | 3300028558 | Ga0265326_10001998 | Ga0265326_100019985 | 589 |
| 94 | 3300028563 | Ga0265319_1000430 | Ga0265319_10004303 | 589 |
| 95 | 3300028573 | Ga0265334_10000240 | Ga0265334_100002405 | 589 |
| 96 | 3300028666 | Ga0265336_10003976 | Ga0265336_100039762 | 589 |
| 97 | 3300028800 | Ga0265338_10000890 | Ga0265338_1000089033 | 589 |
| 98 | 3300029957 | Ga0265324_10004157 | Ga0265324_100041574 | 589 |
| 99 | 3300031238 | Ga0265332_10008952 | Ga0265332_100089522 | 589 |
| 100 | 3300031240 | Ga0265320_10017080 | Ga0265320_100170802 | 589 |
| 101 | 3300031247 | Ga0265340_10012496 | Ga0265340_100124963 | 589 |
| 102 | 3300031344 | Ga0265316_10012709 | Ga0265316_100127096 | 589 |
| 103 | 3300031595 | Ga0265313_10004362 | Ga0265313_100043623 | 589 |
| 104 | 3300031711 | Ga0265314_10002347 | Ga0265314_100023475 | 589 |
| 105 | 3300031712 | Ga0265342_10011526 | Ga0265342_100115263 | 589 |
| 106 | 3300003203 | JGI25406J46586_10002989 | JGI25406J46586_100029892 | 590 |
| 107 | 3300003203 | JGI25406J46586_10012021 | JGI25406J46586_100120212 | 590 |
| 108 | 3300005327 | Ga0070658_10001176 | Ga0070658_1000117613 | 590 |
| 109 | 3300005344 | Ga0070661_100030218 | Ga0070661_1000302182 | 590 |
| 110 | 3300005366 | Ga0070659_100033542 | Ga0070659_1000335423 | 590 |
| 111 | 3300005985 | Ga0081539_10000032 | Ga0081539_10000032107 | 590 |
| 112 | 3300005985 | Ga0081539_10000574 | Ga0081539_1000057448 | 590 |
| 113 | 3300013105 | Ga0157369_10040611 | Ga0157369_100406114 | 590 |
| 114 | 3300025909 | Ga0207705_10007784 | Ga0207705_100077844 | 590 |
| 115 | 3300025921 | Ga0207652_10161147 | Ga0207652_101611472 | 590 |
| 116 | 3300025944 | Ga0207661_10030183 | Ga0207661_100301834 | 590 |
| 117 | 3300026116 | Ga0207674_10026488 | Ga0207674_100264882 | 590 |
| 118 | 3300005844 | Ga0068862_100054528 | Ga0068862_1000545282 | 591 |
| 119 | 3300026116 | Ga0207674_10004560 | Ga0207674_1000456014 | 591 |
| 120 | 3300028380 | Ga0268265_10009000 | Ga0268265_100090002 | 591 |
| 121 | 3300033179 | Ga0307507_10001937 | Ga0307507_1000193731 | 591 |
| 122 | 3300037418 | Ga0395900_0038065 | Ga0395900_0038065_2697_4535 | 591 |
| 123 | 3300037466 | Ga0395898_0040731 | Ga0395898_0040731_1735_3573 | 591 |
| 124 | iso_pu_bacteria | 2887478801 | 2887480109 | 591 |
| 125 | 3300005437 | Ga0070710_10070724 | Ga0070710_100707241 | 593 |
| 126 | 3300014325 | Ga0163163_10012992 | Ga0163163_100129927 | 593 |
| 127 | 3300028794 | Ga0307515_10000060 | Ga0307515_1000006017 | 593 |
| 128 | 3300031730 | Ga0307516_10016651 | Ga0307516_100166513 | 593 |
| 129 | 3300031730 | Ga0307516_10059917 | Ga0307516_100599172 | 593 |
| 130 | 3300031731 | Ga0307405_10027354 | Ga0307405_100273542 | 593 |
| 131 | 3300031901 | Ga0307406_10050167 | Ga0307406_100501672 | 593 |
| 132 | 3300031995 | Ga0307409_100081109 | Ga0307409_1000811092 | 593 |
| 133 | 3300035083 | Ga0373926_0001319 | Ga0373926_0001319_1126_2919 | 593 |
| 134 | 3300035089 | Ga0373944_0000303 | Ga0373944_0000303_4470_6263 | 593 |
| 135 | 3300035113 | Ga0373936_0000160 | Ga0373936_0000160_8042_9835 | 593 |
| 136 | 3300035207 | Ga0373942_0001039 | Ga0373942_0001039_582_2393 | 593 |
| 137 | 3300035695 | Ga0373927_0001329 | Ga0373927_0001329_12408_14201 | 593 |
| 138 | 3300037068 | Ga0373925_0026629 | Ga0373925_0026629_527_2320 | 593 |
| 139 | 3300046459 | Ga0495629_0000252 | Ga0495629_0000252_6823_8694 | 593 |
| 140 | 3300046461 | Ga0495641_0019849 | Ga0495641_0019849_777_2570 | 593 |
| 141 | 3300046462 | Ga0495651_0095154 | Ga0495651_0095154_319_2112 | 593 |
| 142 | 3300046463 | Ga0495653_0003289 | Ga0495653_0003289_10529_12322 | 593 |
| 143 | 3300046477 | Ga0495664_0000074 | Ga0495664_0000074_41242_43035 | 593 |
| 144 | 3300046477 | Ga0495664_0002044 | Ga0495664_0002044_5092_6963 | 593 |
| 145 | 3300046517 | Ga0495630_0010928 | Ga0495630_0010928_2601_4394 | 593 |
| 146 | 3300046529 | Ga0495652_0016191 | Ga0495652_0016191_2740_4533 | 593 |
| 147 | 3300046536 | Ga0495587_0000921 | Ga0495587_0000921_7351_9222 | 593 |
| 148 | 3300046642 | Ga0495634_0000126 | Ga0495634_0000126_53497_55368 | 593 |
| 149 | 3300046663 | Ga0495635_0003543 | Ga0495635_0003543_433_2226 | 593 |
| 150 | 3300046663 | Ga0495635_0012475 | Ga0495635_0012475_1445_3316 | 593 |
| 151 | 3300046675 | Ga0495657_0003759 | Ga0495657_0003759_6817_8688 | 593 |
| 152 | 3300046675 | Ga0495657_0059652 | Ga0495657_0059652_612_2402 | 593 |
| 153 | 3300046680 | Ga0495646_0011336 | Ga0495646_0011336_3245_5116 | 593 |
| 154 | 3300046690 | Ga0495624_0003737 | Ga0495624_0003737_1575_3368 | 593 |
| 155 | 3300046809 | Ga0495600_0000831 | Ga0495600_0000831_11744_13615 | 593 |
| 156 | 3300047317 | Ga0495604_0000268 | Ga0495604_0000268_34244_36115 | 593 |
| 157 | 3300047319 | Ga0495674_0000062 | Ga0495674_0000062_17450_19243 | 593 |
| 158 | 3300047321 | Ga0495676_0008222 | Ga0495676_0008222_4877_6748 | 593 |
| 159 | 3300047471 | Ga0495684_0009928 | Ga0495684_0009928_3674_5467 | 593 |
| 160 | 3300047673 | Ga0495593_0031654 | Ga0495593_0031654_810_2603 | 593 |
| 161 | 3300048089 | Ga0495614_0000520 | Ga0495614_0000520_4108_5979 | 593 |
| 162 | iso_pu_bacteria | 2895427314 | 2895434515 | 593 |
| 163 | 3300005334 | Ga0068869_100001227 | Ga0068869_1000012279 | 594 |
| 164 | 3300005344 | Ga0070661_100009181 | Ga0070661_1000091813 | 594 |
| 165 | 3300005345 | Ga0070692_10004782 | Ga0070692_100047824 | 594 |
| 166 | 3300005441 | Ga0070700_100011124 | Ga0070700_1000111243 | 594 |
| 167 | 3300005535 | Ga0070684_100017595 | Ga0070684_1000175952 | 594 |
| 168 | 3300005535 | Ga0070684_100034046 | Ga0070684_1000340463 | 594 |
| 169 | 3300005564 | Ga0070664_100007836 | Ga0070664_1000078363 | 594 |
| 170 | 3300005577 | Ga0068857_100027313 | Ga0068857_1000273132 | 594 |
| 171 | 3300005983 | Ga0081540_1014078 | Ga0081540_10140782 | 594 |
| 172 | 3300006846 | Ga0075430_100075618 | Ga0075430_1000756181 | 594 |
| 173 | 3300006880 | Ga0075429_100002711 | Ga0075429_10000271111 | 594 |
| 174 | 3300009094 | Ga0111539_10002276 | Ga0111539_100022763 | 594 |
| 175 | 3300009098 | Ga0105245_10066441 | Ga0105245_100664411 | 594 |
| 176 | 3300009147 | Ga0114129_10000097 | Ga0114129_100000977 | 594 |
| 177 | 3300009147 | Ga0114129_10014465 | Ga0114129_100144658 | 594 |
| 178 | 3300020082 | Ga0206353_11944179 | Ga0206353_119441792 | 594 |
| 179 | 3300025933 | Ga0207706_10069099 | Ga0207706_100690992 | 594 |
| 180 | 3300025942 | Ga0207689_10006333 | Ga0207689_100063336 | 594 |
| 181 | 3300025945 | Ga0207679_10016442 | Ga0207679_100164426 | 594 |
| 182 | 3300025945 | Ga0207679_10027780 | Ga0207679_100277803 | 594 |
| 183 | 3300026023 | Ga0207677_10005116 | Ga0207677_100051165 | 594 |
| 184 | 3300026067 | Ga0207678_10009080 | Ga0207678_100090805 | 594 |
| 185 | 3300026067 | Ga0207678_10035682 | Ga0207678_100356823 | 594 |
| 186 | 3300026075 | Ga0207708_10039672 | Ga0207708_100396723 | 594 |
| 187 | 3300048915 | Ga0496112_0039330 | Ga0496112_0039330_1851_3722 | 594 |
| 188 | 3300050507 | nmdc:mga05p37_11984_c1 | nmdc:mga05p37_11984_c1_5076_6902 | 594 |
| 189 | 3300050508 | nmdc:mga09592_8420_c1 | nmdc:mga09592_8420_c1_5027_6823 | 594 |
| 190 | 3300050509 | nmdc:mga0qj67_31208_c1 | nmdc:mga0qj67_31208_c1_2329_4125 | 594 |
| 191 | iso_pu_bacteria | 2791354901 | 2791911040 | 594 |
| 192 | 3300048911 | Ga0496108_0000003 | Ga0496108_0000003_424308_426218 | 595 |
| 193 | 3300049581 | Ga0501047_0002376 | Ga0501047_0002376_10227_12047 | 595 |
| 194 | 3300028794 | Ga0307515_10041920 | Ga0307515_100419202 | 596 |
| 195 | 3300030522 | Ga0307512_10005182 | Ga0307512_100051826 | 597 |
| 196 | iso_pu_bacteria | 3002998708 | 3003007922 | 597 |
| 197 | 3300031456 | Ga0307513_10078557 | Ga0307513_100785573 | 598 |
| 198 | iso_pu_bacteria | 2643221632 | 2644181914 | 599 |
| 199 | 3300032126 | Ga0307415_100013203 | Ga0307415_1000132034 | 600 |
| 200 | 3300045976 | Ga0466967_0059265 | Ga0466967_0059265_942_2783 | 604 |
| 201 | 3300003203 | JGI25406J46586_10002761 | JGI25406J46586_100027614 | 619 |
| 202 | 3300005985 | Ga0081539_10000984 | Ga0081539_1000098416 | 619 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6b89-assembly1.cif.gz_A | e. coli lptb in complex with adp and novobiocin | 0.9473 | 339 | 584 |
| 6b89-assembly1.cif.gz_A | e. coli lptb in complex with adp and novobiocin | 0.9355 | 339 | 584 |
| 2awo-assembly2.cif.gz_D | crystal structure of the adp-mg-bound e. coli malk (crystallized with adp-mg) | 0.9313 | 339 | 573 |
| 4khz-assembly1.cif.gz_B | crystal structure of the maltose-binding protein/maltose transporter complex in an pre-translocation conformation bound to maltoheptaose | 0.9252 | 339 | 573 |
| 6mjp-assembly1.cif.gz_B | lptb(e163q)fgc from vibrio cholerae | 0.9214 | 339 | 584 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0A9S7_4_254_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9319 | 340 | 587 | 3.40.50.300 |
| 2awoD01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9287 | 339 | 569 | 3.40.50.300 |
| af_Q58664_1_235_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9278 | 340 | 586 | 3.40.50.300 |
| af_Q57554_4_248_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9218 | 340 | 587 | 3.40.50.300 |
| af_P0A9S7_4_254_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9178 | 340 | 587 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A538JJF5-F1-model_v4 | ABC transporter ATP-binding protein | 0.9527 | 340 | 586 |
GO:0005524
GO:0005886 GO:0016887 |
| AF-A0A644X469-F1-model_v4 | Lipopolysaccharide export system ATP-binding protein LptB (EC 3.6.3.-) | 0.9508 | 335 | 586 |
GO:0005304
GO:0005524 GO:0005886 GO:0015188 GO:0015192 GO:0015808 GO:0016887 GO:0042941 GO:1903805 GO:1903806 |
| AF-A0A0R2S125-F1-model_v4 | ABC transporter ATP-binding protein | 0.9416 | 369 | 587 |
GO:0005524
GO:0016887 GO:0043190 GO:0055085 |
| AF-A0A257UMR1-F1-model_v4 | deleted | 0.9362 | 340 | 586 |
|
| AF-A0A538R5L1-F1-model_v4 | Branched-chain amino acid ABC transporter ATP-binding protein/permease | 0.9357 | 1 | 590 |
GO:0005524
GO:0005886 GO:0015658 GO:0016887 |
Predicted Structure (AlphaFold2)
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