F310398

General Info

Members Datasets Scaffolds Average Seq Length
202 157 135 643

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0025803|Ga0501031_0025803_1245_3467
Length 709
Sequence MADTVAYRPKAGEIPTGPGVYRFRDAKKRVLYVGKAKNLRARLSNYFQPLRNLHERTRRMVTTAASVEWTVVANEFEALQLEYTWIKEFNPPFNVQFRDDKTYPYLAVTLADEVPRAMVTRNRSIKGARYFGPYTKVWAIRETLDLMLKAFPMRSCSDGVYRRAQQTGRPCLLGDIGKCVAPCVARVTLEEHREVADDFVSFMAGNDTRYVRALEHNMREAAEAQEYEAAARYRDSIQAMRAVMEKTAVVFSDDVDADVFGIADDELAAAVQQFIVRGGRIRGTRSWVVDKELDVDVAELIETVLENAYDGEFAPPREILVPVLPEDSSELERWLGARRTQGAEGTHTRGVAPSKVHLRVAQRGEKAALAQTAETNAKNALMLYKTRRSADFVARSQALEDIRDALGMAEAPLRMECYDVSHLSGTNIVASMVVFEDGLPRKDQYRRFSIPASTDDTESIYQVLTRRLAYLRGDDDERATGHRAGALADAEEAAGTRPDGAGAGDAMQVSQRPRKFSYPPQLLLVDGGQPQVAAARRALEESGVTGIQLAGIAKRLEELWLPDSDFPVILPRNSDALFLVQRIRDEAHRFAITYQRAKRRRDISSTLADIPGLGPSRVRELLKHFGSVARLRQADPELISEVKGFGPALAAAVHSALHDAGPDDANEADVTTGTATQQGSSTAEDGGAEERRDPVGERGTMAAGEVPTA

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
3 2643221546 Microbacterium sp. Root53 Isolate Unclassified
4 2643221549 Agromyces sp. Root1464 Isolate Unclassified
5 2643221566 Microbacterium sp. Root166 Isolate Unclassified
6 2643221572 Leifsonia sp. Root60 Isolate Unclassified
7 2643221575 Microbacterium sp. Root61 Isolate Unclassified
8 2643221597 Microbacterium sp. Root180 Isolate Unclassified
9 2643221616 Leifsonia sp. Root227 Isolate Unclassified
10 2643221619 Agromyces sp. Root81 Isolate Unclassified
11 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
12 2643221649 Leifsonia sp. Root4 Isolate Unclassified
13 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
14 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
15 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
16 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
17 2773857759 Microbacterium sp. 1294 Isolate Unclassified
18 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
19 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
20 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
21 2808606372 Agromyces sp. 23-23 Isolate Unclassified
22 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
23 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
24 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
25 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
26 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
27 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
28 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
29 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
30 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
31 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
32 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
33 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
34 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
35 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
36 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
37 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
38 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
39 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
40 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
41 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
42 2919069694 Microbacterium sp. 1154 Isolate Unclassified
43 2919395869 Microbacterium resistens 2980 Isolate Unclassified
44 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
45 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
46 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
47 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
48 2928153084 Leifsonia sp. 563 Isolate Unclassified
49 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
50 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
51 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
52 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
53 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
54 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
55 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
56 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
57 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
58 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
59 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
60 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
61 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
62 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
63 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
64 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
65 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
66 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
67 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
68 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
69 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
70 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
71 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
72 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
73 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
74 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
75 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
76 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
77 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
78 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
79 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
92 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
97 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
98 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
99 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
105 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
119 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
120 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
121 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
122 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
143 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
144 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
145 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
148 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
153 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
154 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
155 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
156 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
157 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.84
Metatranscriptomes 0.99
Isolates 33.17

Biome Distribution

Category Percentage (%)
Aerial Root 0.99
Bulb 0
Endosphere 17.33
Nodule 0
Rhizoplane 3.96
Rhizosphere 39.6
Stem 0
Stem Tuber 0.5
Unclassified 37.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10004243 3300001979 Bacteria 6177
2 JGI25164J39214_1000773 3300002772 Bacteria 11667
3 JGI25165J46597_1000330 3300003214 Bacteria 56543
4 Ga0006562J51391_1110997 3300003578 Bacteria 4882
5 Ga0006562J51391_1110998 3300003578 Bacteria 4800
6 Ga0055539_1000008 3300003752 Bacteria 537665
7 Ga0055533_1000001 3300003756 Bacteria 1863437
8 Ga0055525_1000569 3300003759 Bacteria 16457
9 Ga0055527_1000001 3300003760 Bacteria 850044
10 Ga0055529_1000018 3300003763 Bacteria 344344
11 Ga0065714_10068444 3300005288 Bacteria 4723
12 Ga0070667_100056495 3300005367 Bacteria 3316
13 Ga0075365_10002020 3300006038 Bacteria 9632
14 Ga0075365_10008238 3300006038 Bacteria 5898
15 Ga0075364_10012086 3300006051 Bacteria 5269
16 Ga0075369_10001250 3300006186 Bacteria 8640
17 Ga0075370_10008331 3300006353 Bacteria 5330
18 Ga0105237_10071391 3300009545 Bacteria 3467
19 Ga0157369_10000408 3300013105 Bacteria 57117
20 Ga0157369_10007844 3300013105 Bacteria 12281
21 Ga0171462_1003 3300013250 Bacteria 853796
22 Ga0163162_10092190 3300013306 Bacteria 3113
23 Ga0157372_10112656 3300013307 Bacteria 3117
24 Ga0209566_100050 3300025225 Bacteria 234653
25 Ga0209674_100001 3300025226 Bacteria 4013750
26 Ga0209672_100006 3300025228 Bacteria 1004497
27 Ga0209147_100484 3300025229 Bacteria 23911
28 Ga0209563_100001 3300025230 Bacteria 4013775
29 Ga0207427_100052 3300025231 Bacteria 218228
30 Ga0209437_100484 3300025233 Bacteria 29919
31 Ga0209677_100001 3300025253 Bacteria 4013787
32 Ga0209677_100838 3300025253 Bacteria 15233
33 Ga0209148_1000015 3300025254 Bacteria 850103
34 Ga0209233_1000001 3300025261 Bacteria 2992747
35 Ga0209455_1000013 3300025272 Bacteria 850103
36 Ga0209455_1000903 3300025272 Bacteria 15459
37 Ga0207671_10051422 3300025914 Bacteria 3053
38 Ga0207709_10016943 3300025935 Bacteria 4060
39 Ga0207658_10027350 3300025986 Bacteria 4006
40 Ga0307514_10003710 3300031649 Bacteria 14428
41 Ga0307406_10001627 3300031901 Bacteria 12352
42 Ga0395899_0077324 3300037312 Bacteria 2427
43 Ga0395900_0005064 3300037418 Bacteria 13829
44 Ga0395900_0184549 3300037418 Bacteria 2118
45 Ga0395898_0000131 3300037466 Bacteria 192369
46 Ga0466965_0018648 3300044683 Bacteria 3329
47 Ga0466966_0020645 3300044684 Bacteria 4328
48 Ga0466961_0021727 3300044693 Bacteria 4128
49 Ga0466970_0000004 3300044765 Bacteria 108620
50 Ga0466960_0004531 3300044901 Bacteria 5445
51 Ga0466960_0017313 3300044901 Bacteria 3140
52 Ga0495638_0014854 3300046460 Bacteria 5249
53 Ga0495672_0010223 3300047320 Bacteria 6705
54 Ga0496100_0010150 3300048903 Bacteria 5323
55 Ga0496102_0019952 3300048905 Bacteria 5913
56 Ga0496103_0026316 3300048906 Bacteria 3522
57 Ga0496105_0005230 3300048908 Bacteria 9836
58 Ga0496107_0032050 3300048910 Bacteria 3754
59 Ga0496109_0038528 3300048912 Bacteria 4322
60 Ga0496114_0025344 3300048917 Bacteria 4848
61 Ga0496114_0060008 3300048917 Bacteria 3178
62 Ga0496117_0000128 3300048920 Bacteria 166039
63 Ga0496117_0000471 3300048920 Bacteria 66939
64 Ga0496117_0001264 3300048920 Bacteria 37571
65 Ga0496117_0028126 3300048920 Bacteria 4358
66 Ga0496118_0003676 3300048921 Bacteria 19031
67 Ga0496118_0005054 3300048921 Bacteria 15209
68 Ga0496118_0032170 3300048921 Bacteria 4330
69 Ga0496118_0034600 3300048921 Bacteria 4118
70 Ga0496118_0077594 3300048921 Bacteria 2355
71 Ga0496119_0001505 3300048922 Bacteria 27872
72 Ga0496119_0002431 3300048922 Bacteria 20449
73 Ga0496119_0006356 3300048922 Bacteria 10983
74 Ga0496119_0010172 3300048922 Bacteria 7943
75 Ga0496119_0014233 3300048922 Bacteria 6247
76 Ga0496119_0041907 3300048922 Bacteria 2909
77 Ga0496120_0000593 3300048923 Bacteria 54794
78 Ga0496120_0002142 3300048923 Bacteria 21065
79 Ga0496120_0005796 3300048923 Bacteria 9686
80 Ga0496122_0000031 3300048925 Bacteria 329726
81 Ga0496122_0000120 3300048925 Bacteria 182539
82 Ga0496122_0001347 3300048925 Bacteria 40068
83 Ga0496122_0004276 3300048925 Bacteria 17906
84 Ga0496123_0000013 3300048926 Bacteria 439694
85 Ga0496123_0000051 3300048926 Bacteria 237095
86 Ga0496123_0002262 3300048926 Bacteria 24261
87 Ga0496123_0002670 3300048926 Bacteria 21505
88 Ga0496124_0009978 3300048927 Bacteria 9699
89 Ga0496124_0012079 3300048927 Bacteria 8571
90 Ga0496124_0021630 3300048927 Bacteria 5924
91 Ga0496124_0071949 3300048927 Bacteria 2864
92 Ga0496125_0000097 3300048928 Bacteria 204607
93 Ga0496125_0002360 3300048928 Bacteria 24729
94 Ga0496125_0010821 3300048928 Bacteria 9186
95 Ga0496126_0001388 3300048929 Bacteria 38310
96 Ga0496126_0002236 3300048929 Bacteria 26771
97 Ga0501031_0025803 3300049568 Bacteria 3834
98 Ga0501032_0008693 3300049569 Bacteria 7396
99 Ga0501033_0009470 3300049570 Bacteria 7501
100 Ga0501034_0037430 3300049571 Bacteria 4912
101 Ga0501037_0010485 3300049573 Bacteria 6806
102 Ga0501037_0041551 3300049573 Bacteria 3381
103 Ga0501038_0003536 3300049574 Bacteria 14541
104 Ga0501039_0018063 3300049575 Bacteria 5411
105 Ga0501039_0077720 3300049575 Bacteria 2581
106 Ga0501042_0000599 3300049578 Bacteria 19202
107 Ga0501043_0014284 3300049579 Bacteria 6213
108 Ga0501046_0004565 3300049580 Bacteria 12534
109 Ga0501046_0020136 3300049580 Bacteria 5522
110 Ga0501047_0042861 3300049581 Bacteria 4372
111 Ga0501047_0052159 3300049581 Bacteria 3953
112 Ga0501048_0021349 3300049582 Bacteria 4740
113 Ga0501048_0024482 3300049582 Bacteria 4406
114 Ga0501070_0000565 3300049586 Bacteria 33728
115 Ga0501070_0000673 3300049586 Bacteria 31551
116 Ga0501070_0002886 3300049586 Bacteria 14978
117 Ga0501070_0023487 3300049586 Bacteria 5165
118 Ga0501071_0016627 3300049587 Bacteria 5061
119 Ga0501073_0021516 3300049589 Bacteria 4649
120 Ga0501083_0000169 3300049744 Bacteria 42763
121 Ga0501035_0004183 3300049822 Bacteria 13715
122 Ga0501035_0022701 3300049822 Bacteria 5763
123 Ga0501035_0072198 3300049822 Bacteria 3055
124 Ga0501044_0067436 3300049823 Bacteria 3646
125 Ga0501044_0122122 3300049823 Bacteria 2604
126 nmdc:mga00v17_8550_c1 3300050491 Bacteria 5509
127 nmdc:mga0yw44_10499_c1 3300050492 Bacteria 4735
128 nmdc:mga07m45_12894_c1 3300050496 Bacteria 4422
129 Ga0500635_0000012 3300053080 Bacteria 138781
130 Ga0500643_000425 3300053087 Bacteria 32082
131 Ga0500556_0000001 3300053104 Bacteria 1135060
132 Ga0500559_0000359 3300053136 Bacteria 33891
133 Ga0500568_0000006 3300053139 Bacteria 522235
134 Ga0500573_0017617 3300053140 Bacteria 4068
135 Ga0500616_0001598 3300053153 Bacteria 21111

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048920 Ga0496117_0028126 Ga0496117_0028126_2725_4332 523
2 3300048903 Ga0496100_0010150 Ga0496100_0010150_3458_5293 563
3 3300048921 Ga0496118_0077594 Ga0496118_0077594_495_2330 563
4 3300048920 Ga0496117_0001264 Ga0496117_0001264_2567_4342 565
5 3300048921 Ga0496118_0005054 Ga0496118_0005054_245_2020 565
6 3300046460 Ga0495638_0014854 Ga0495638_0014854_29_1831 572
7 3300048929 Ga0496126_0001388 Ga0496126_0001388_8291_10267 591
8 3300053136 Ga0500559_0000359 Ga0500559_0000359_7162_9051 595
9 3300049822 Ga0501035_0072198 Ga0501035_0072198_918_3044 596
10 3300044901 Ga0466960_0004531 Ga0466960_0004531_838_2787 604
11 3300053087 Ga0500643_000425 Ga0500643_000425_23479_25404 604
12 3300005288 Ga0065714_10068444 Ga0065714_100684442 606
13 3300025272 Ga0209455_1000903 Ga0209455_10009037 607
14 3300013105 Ga0157369_10007844 Ga0157369_100078443 608
15 3300044901 Ga0466960_0017313 Ga0466960_0017313_452_2446 608
16 3300047320 Ga0495672_0010223 Ga0495672_0010223_3173_5041 608
17 iso_pu_bacteria 8046352972 8046356448 608
18 3300003752 Ga0055539_1000008 Ga0055539_1000008202 610
19 3300003756 Ga0055533_1000001 Ga0055533_1000001869 610
20 3300003759 Ga0055525_1000569 Ga0055525_10005695 610
21 3300005367 Ga0070667_100056495 Ga0070667_1000564953 610
22 3300025225 Ga0209566_100050 Ga0209566_100050119 610
23 3300025226 Ga0209674_100001 Ga0209674_100001869 610
24 3300025230 Ga0209563_100001 Ga0209563_100001869 610
25 3300025253 Ga0209677_100001 Ga0209677_100001869 610
26 3300025986 Ga0207658_10027350 Ga0207658_100273502 610
27 3300050496 nmdc:mga07m45_12894_c1 nmdc:mga07m45_12894_c1_134_2047 610
28 3300044684 Ga0466966_0020645 Ga0466966_0020645_1166_3241 611
29 3300044693 Ga0466961_0021727 Ga0466961_0021727_301_2376 611
30 3300048928 Ga0496125_0010821 Ga0496125_0010821_4752_6665 611
31 iso_pu_bacteria 2844852863 2844855480 611
32 iso_pu_bacteria 8056037122 8056037530 611
33 iso_pu_bacteria 2862993130 2862996291 614
34 3300031649 Ga0307514_10003710 Ga0307514_100037104 615
35 3300048922 Ga0496119_0001505 Ga0496119_0001505_10729_12684 615
36 3300049571 Ga0501034_0037430 Ga0501034_0037430_1648_3543 615
37 3300049586 Ga0501070_0000565 Ga0501070_0000565_26688_28583 615
38 3300049587 Ga0501071_0016627 Ga0501071_0016627_2551_4446 615
39 iso_pu_bacteria 2643221572 2643875148 615
40 iso_pu_bacteria 2643221669 2644382204 615
41 iso_pu_bacteria 2895660088 2895661275 615
42 iso_pu_bacteria 8004212874 8004214083 615
43 3300053104 Ga0500556_0000001 Ga0500556_0000001_234109_235980 616
44 3300053139 Ga0500568_0000006 Ga0500568_0000006_499242_501113 616
45 iso_pu_bacteria 2643221649 2644279743 616
46 iso_pu_bacteria 2852643534 2852645448 616
47 iso_pu_bacteria 2964326757 2964329698 616
48 iso_pu_bacteria 2857733635 2857735650 617
49 iso_pu_bacteria 2966921586 2966922772 617
50 3300048925 Ga0496122_0001347 Ga0496122_0001347_6058_7938 618
51 3300048926 Ga0496123_0002670 Ga0496123_0002670_3886_5766 618
52 3300049581 Ga0501047_0042861 Ga0501047_0042861_45_2003 618
53 3300049569 Ga0501032_0008693 Ga0501032_0008693_352_2454 619
54 3300049573 Ga0501037_0010485 Ga0501037_0010485_54_2156 619
55 3300049574 Ga0501038_0003536 Ga0501038_0003536_4162_6264 619
56 3300049575 Ga0501039_0077720 Ga0501039_0077720_464_2566 619
57 3300049580 Ga0501046_0004565 Ga0501046_0004565_924_3026 619
58 3300049582 Ga0501048_0021349 Ga0501048_0021349_515_2617 619
59 3300049586 Ga0501070_0023487 Ga0501070_0023487_1654_3756 619
60 3300049822 Ga0501035_0004183 Ga0501035_0004183_5833_7935 619
61 iso_pu_bacteria 2870622029 2870623534 619
62 iso_pu_bacteria 2939657138 2939657964 619
63 iso_pu_bacteria 8057345674 8057348706 619
64 3300025253 Ga0209677_100838 Ga0209677_10083810 620
65 3300049578 Ga0501042_0000599 Ga0501042_0000599_10525_12477 620
66 3300049744 Ga0501083_0000169 Ga0501083_0000169_28191_30158 620
67 iso_pu_bacteria 2585428094 2587862845 620
68 iso_pu_bacteria 2643221632 2644183526 620
69 3300044765 Ga0466970_0000004 Ga0466970_0000004_103819_105798 621
70 3300048922 Ga0496119_0002431 Ga0496119_0002431_15751_17676 621
71 3300048923 Ga0496120_0000593 Ga0496120_0000593_37436_39361 621
72 3300048928 Ga0496125_0000097 Ga0496125_0000097_153842_155794 621
73 3300049586 Ga0501070_0002886 Ga0501070_0002886_7141_9066 621
74 3300013105 Ga0157369_10000408 Ga0157369_1000040832 622
75 3300048908 Ga0496105_0005230 Ga0496105_0005230_4713_6731 622
76 3300048922 Ga0496119_0041907 Ga0496119_0041907_500_2518 622
77 3300049581 Ga0501047_0052159 Ga0501047_0052159_548_2524 622
78 3300053140 Ga0500573_0017617 Ga0500573_0017617_356_2272 622
79 iso_pu_bacteria 2643221616 2644096122 622
80 iso_pu_bacteria 2884763398 2884765488 622
81 iso_pu_bacteria 2974294766 2974296921 622
82 iso_pu_bacteria 2974324384 2974326847 622
83 iso_pu_bacteria 2977264416 2977266359 622
84 3300013306 Ga0163162_10092190 Ga0163162_100921902 623
85 3300048905 Ga0496102_0019952 Ga0496102_0019952_1332_3365 623
86 3300048920 Ga0496117_0000128 Ga0496117_0000128_158860_160779 623
87 3300053080 Ga0500635_0000012 Ga0500635_0000012_27503_29506 623
88 3300009545 Ga0105237_10071391 Ga0105237_100713912 624
89 3300013307 Ga0157372_10112656 Ga0157372_101126562 624
90 3300025914 Ga0207671_10051422 Ga0207671_100514222 624
91 3300037418 Ga0395900_0184549 Ga0395900_0184549_35_1942 624
92 3300048906 Ga0496103_0026316 Ga0496103_0026316_190_2097 624
93 3300048910 Ga0496107_0032050 Ga0496107_0032050_1085_2992 624
94 3300048922 Ga0496119_0010172 Ga0496119_0010172_2365_4332 624
95 3300048925 Ga0496122_0000120 Ga0496122_0000120_63831_65798 624
96 3300048926 Ga0496123_0000051 Ga0496123_0000051_93726_95693 624
97 3300048927 Ga0496124_0021630 Ga0496124_0021630_2128_4095 624
98 iso_pu_bacteria 2585428157 2588108285 624
99 iso_pu_bacteria 2857729791 2857732595 624
100 iso_pu_bacteria 2906799679 2906800347 624
101 iso_pu_bacteria 2928090899 2928092320 624
102 iso_pu_bacteria 2928121344 2928122937 624
103 iso_pu_bacteria 2939660829 2939661037 624
104 iso_pu_bacteria 2984580707 2984580904 624
105 3300031901 Ga0307406_10001627 Ga0307406_100016272 625
106 3300048921 Ga0496118_0003676 Ga0496118_0003676_11222_13135 625
107 3300048922 Ga0496119_0006356 Ga0496119_0006356_3217_5130 625
108 3300048923 Ga0496120_0005796 Ga0496120_0005796_1061_2974 625
109 3300048925 Ga0496122_0000031 Ga0496122_0000031_5871_7784 625
110 3300048926 Ga0496123_0000013 Ga0496123_0000013_5881_7794 625
111 3300048927 Ga0496124_0012079 Ga0496124_0012079_1086_2999 625
112 3300049568 Ga0501031_0025803 Ga0501031_0025803_1245_3467 625
113 3300049570 Ga0501033_0009470 Ga0501033_0009470_1741_3990 625
114 3300049573 Ga0501037_0041551 Ga0501037_0041551_86_2308 625
115 3300049575 Ga0501039_0018063 Ga0501039_0018063_2454_4676 625
116 3300049579 Ga0501043_0014284 Ga0501043_0014284_2946_5168 625
117 3300049580 Ga0501046_0020136 Ga0501046_0020136_2256_4478 625
118 3300049582 Ga0501048_0024482 Ga0501048_0024482_853_3075 625
119 3300049589 Ga0501073_0021516 Ga0501073_0021516_663_2891 625
120 3300049822 Ga0501035_0022701 Ga0501035_0022701_1655_3877 625
121 3300049823 Ga0501044_0067436 Ga0501044_0067436_1287_3509 625
122 3300049823 Ga0501044_0122122 Ga0501044_0122122_96_2297 625
123 iso_pu_bacteria 2833709550 2833710711 625
124 iso_pu_bacteria 2844841374 2844842535 625
125 iso_pu_bacteria 2857720070 2857721673 625
126 iso_pu_bacteria 2919055335 2919058220 625
127 iso_pu_bacteria 2928153084 2928156483 625
128 3300002772 JGI25164J39214_1000773 JGI25164J39214_10007734 626
129 3300003214 JGI25165J46597_1000330 JGI25165J46597_100033046 626
130 3300003760 Ga0055527_1000001 Ga0055527_1000001332 626
131 3300003763 Ga0055529_1000018 Ga0055529_1000018164 626
132 3300006038 Ga0075365_10008238 Ga0075365_100082384 626
133 3300006051 Ga0075364_10012086 Ga0075364_100120862 626
134 3300006186 Ga0075369_10001250 Ga0075369_100012505 626
135 3300025228 Ga0209672_100006 Ga0209672_100006644 626
136 3300025229 Ga0209147_100484 Ga0209147_1004844 626
137 3300025231 Ga0207427_100052 Ga0207427_10005268 626
138 3300025233 Ga0209437_100484 Ga0209437_1004842 626
139 3300025254 Ga0209148_1000015 Ga0209148_1000015488 626
140 3300025261 Ga0209233_1000001 Ga0209233_10000012016 626
141 3300025272 Ga0209455_1000013 Ga0209455_1000013488 626
142 3300048921 Ga0496118_0032170 Ga0496118_0032170_177_2195 626
143 3300049586 Ga0501070_0000673 Ga0501070_0000673_6866_8875 626
144 3300050491 nmdc:mga00v17_8550_c1 nmdc:mga00v17_8550_c1_1142_3028 626
145 3300050492 nmdc:mga0yw44_10499_c1 nmdc:mga0yw44_10499_c1_1854_3740 626
146 3300053153 Ga0500616_0001598 Ga0500616_0001598_8010_9992 626
147 iso_pu_bacteria 2643221546 2643752736 626
148 iso_pu_bacteria 2808606368 2808885433 626
149 iso_pu_bacteria 2808606447 2809227193 626
150 iso_pu_bacteria 2852632344 2852633426 626
151 iso_pu_bacteria 2919443155 2919446227 626
152 3300048920 Ga0496117_0000471 Ga0496117_0000471_49306_51249 627
153 3300048921 Ga0496118_0034600 Ga0496118_0034600_568_2484 627
154 3300048922 Ga0496119_0014233 Ga0496119_0014233_2970_4913 627
155 3300048923 Ga0496120_0002142 Ga0496120_0002142_15350_17293 627
156 3300048925 Ga0496122_0004276 Ga0496122_0004276_12808_14751 627
157 3300048926 Ga0496123_0002262 Ga0496123_0002262_10349_12292 627
158 3300048927 Ga0496124_0009978 Ga0496124_0009978_5351_7294 627
159 3300048927 Ga0496124_0071949 Ga0496124_0071949_404_2347 627
160 3300048928 Ga0496125_0002360 Ga0496125_0002360_6646_8589 627
161 3300048929 Ga0496126_0002236 Ga0496126_0002236_23377_25320 627
162 iso_pu_bacteria 2643221566 2643848119 627
163 iso_pu_bacteria 2643221597 2643995982 627
164 iso_pu_bacteria 2721755702 2723642020 627
165 iso_pu_bacteria 2757320536 2758226352 627
166 iso_pu_bacteria 2773857758 2774380750 627
167 iso_pu_bacteria 2773857759 2774384692 627
168 iso_pu_bacteria 2904509784 2904512899 627
169 iso_pu_bacteria 2908678064 2908681170 627
170 iso_pu_bacteria 2919069694 2919072946 627
171 iso_pu_bacteria 2919523602 2919524594 627
172 iso_pu_bacteria 2935409751 2935411370 627
173 iso_pu_bacteria 2977228692 2977231109 627
174 iso_pu_bacteria 2977236895 2977239901 627
175 iso_pu_bacteria 2977251589 2977253727 627
176 iso_pu_bacteria 2984542743 2984545826 627
177 iso_pu_bacteria 8016254467 8016257787 627
178 3300006038 Ga0075365_10002020 Ga0075365_100020205 628
179 3300006353 Ga0075370_10008331 Ga0075370_100083312 628
180 3300044683 Ga0466965_0018648 Ga0466965_0018648_407_2326 628
181 iso_pu_bacteria 2643221575 2643885164 628
182 iso_pu_bacteria 2808606306 2808631412 628
183 iso_pu_bacteria 2821268502 2821269788 628
184 3300003578 Ga0006562J51391_1110997 Ga0006562J51391_11109972 629
185 3300003578 Ga0006562J51391_1110998 Ga0006562J51391_11109983 629
186 3300037312 Ga0395899_0077324 Ga0395899_0077324_226_2250 629
187 3300037418 Ga0395900_0005064 Ga0395900_0005064_6104_8128 629
188 3300037466 Ga0395898_0000131 Ga0395898_0000131_113857_115881 629
189 3300048912 Ga0496109_0038528 Ga0496109_0038528_1846_3756 629
190 iso_pu_bacteria 2808606372 2808901998 629
191 iso_pu_bacteria 2811994872 2812322883 629
192 iso_pu_bacteria 2919395869 2919398335 629
193 3300025935 Ga0207709_10016943 Ga0207709_100169433 630
194 iso_pu_bacteria 2643221549 2643767782 630
195 iso_pu_bacteria 2643221619 2644111157 630
196 iso_pu_bacteria 2773857763 2774399781 630
197 iso_pu_bacteria 8045830549 8045830936 630
198 3300048917 Ga0496114_0025344 Ga0496114_0025344_1417_3369 631
199 3300048917 Ga0496114_0060008 Ga0496114_0060008_394_2313 631
200 iso_pu_bacteria 2808606439 2809195896 631
201 3300013250 Ga0171462_1003 Ga0171462_1003644 632
202 3300001979 JGI24740J21852_10004243 JGI24740J21852_100042433 643

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22920

UvrC_RNaseH

UvrC Ribonuclease H-like domain

256

384

0.98

PF08459

UvrC_RNaseH_dom

UvrC RNAse H endonuclease domain

403

592

0.97

PF14520

HHH_5

Helix-hairpin-helix domain

604

659

0.95

PF01541

GIY-YIG

GIY-YIG catalytic domain

17

95

0.94

PF02151

UVR

UvrB/uvrC motif

208

243

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yd1-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima bound to its catalytic divalent cation: magnesium 0.9436 14 95
1yd4-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima: point mutant y29f bound to its catalytic divalent cation 0.9418 14 95
1yd3-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima: point mutant y43f bound to its catalytic divalent cation 0.937 14 96
1yd2-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima: point mutant y19f bound to the catalytic divalent cation 0.9351 14 96
1yd5-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima: point mutant n88a bound to its catalytic divalent cation 0.9284 14 96
ID Description Score Start End Superfamily
af_P9WLJ1_236_332_3.40.1440.10 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.9399 14 96 3.40.1440.10
af_P9WFC5_247_395_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9376 248 382 3.30.420.10
1yd2A00 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.9351 14 96 3.40.1440.10
af_P9WFC5_104_206_3.40.1440.10 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.9337 104 205 3.40.1440.10
af_P9WFC5_7_103_3.40.1440.10 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.9292 7 103 3.40.1440.10
ID Description Score Start End GO Terms
AF-A0A2W6B192-F1-model_v4 Excinuclease ABC subunit C 0.9485 13 91 GO:0006289
GO:0009380
AF-A0A352IGT2-F1-model_v4 deleted 0.9436 248 367
AF-A0A7U8U5L0-F1-model_v4 deleted 0.9421 7 100
AF-X1FGW7-F1-model_v4 GIY-YIG domain-containing protein 0.9385 14 88 GO:0006289
GO:0009380
AF-A0A7Y3MJX8-F1-model_v4 GIY-YIG nuclease family protein 0.9344 12 92 GO:0006289
GO:0009380

Feature Viewer

pLDDT pTM Quality
79.91 0.59 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map