F310672

General Info

Members Datasets Scaffolds Average Seq Length
203 131 406 434

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10203763|rootL2_102037635
Length 470
Sequence MESILNNLTQIAPLADEITQLKPVEIAALGVPGTSSAPMHYYSLNHNAPKATFAEATVNGQAPDKGLYFPKYIPKLPQDFIKNLRNYSKEEVGVTVMKPYVGNSLPEAELERIVSETVNFDFPLVKVTDDIYSLELFHGPTLAFKDVGARFMSRCLGYFNRNSSKHTTVLVATSGDTGGAVANGFLGVEGVNVVILYPSGKVSPIQELQLTTPGQNITALEVNGTFDDCQAMVKRVFTDADLNAALTLTSANSINVARWLPQQLYYFFAYQQWQHNEAPVICVPSGNFGNICAGLLAYMSGLPVKHFIAACNANDVVLGFLHSGEYMPKPAVATISNAMDVGNPSNFVRIMEMFGQRLGDIKRVLSAVSINDVTTEQTIKTVFEQQGYLLDPHGAVGYHALSNYLAEHAGDKGIFLETAHPVKFPEVVERATGKQIPFPQGVQHLLSLPKHSVAMPASFDALKEWLLNTK

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
104 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
110 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
111 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
112 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
118 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
124 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
125 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
126 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
127 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
130 2914759650 Rhizosphaericola mali Isolate Rhizosphere
131 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.01
Metatranscriptomes 0
Isolates 0.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.99
Nodule 0
Rhizoplane 0.49
Rhizosphere 96.55
Stem 0
Stem Tuber 0
Unclassified 5.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10203763 3300003322 Bacteria 3960
2 rootL2_10206117 3300003322 Bacteria 5811
3 Ga0065707_10086349 3300005295 Bacteria 5520
4 Ga0070658_10037838 3300005327 Bacteria 3891
5 Ga0070658_10067185 3300005327 Bacteria 2929
6 Ga0070676_10045184 3300005328 Bacteria 2565
7 Ga0070690_100063971 3300005330 Bacteria 2375
8 Ga0070670_100006973 3300005331 Bacteria 9577
9 Ga0070670_100045009 3300005331 Bacteria 3793
10 Ga0070670_100103447 3300005331 Bacteria 2453
11 Ga0068869_100042592 3300005334 Bacteria 3255
12 Ga0068868_100019078 3300005338 Bacteria 5134
13 Ga0068868_100072406 3300005338 Bacteria 2749
14 Ga0070689_100023646 3300005340 Bacteria 4603
15 Ga0070689_100042489 3300005340 Unclassified 3491
16 Ga0070668_100002932 3300005347 Bacteria 12610
17 Ga0070668_100062920 3300005347 Unclassified 2876
18 Ga0070669_100003052 3300005353 Bacteria 12044
19 Ga0070669_100152476 3300005353 Bacteria 1790
20 Ga0070675_100028751 3300005354 Bacteria 4477
21 Ga0070671_100219208 3300005355 Bacteria 1614
22 Ga0070688_100001211 3300005365 Bacteria 12840
23 Ga0070688_100079073 3300005365 Bacteria 2123
24 Ga0070659_100017266 3300005366 Bacteria 5426
25 Ga0070667_100246526 3300005367 Bacteria 1596
26 Ga0070678_100083404 3300005456 Bacteria 2429
27 Ga0070681_10035560 3300005458 Bacteria 5004
28 Ga0070681_10120037 3300005458 Bacteria 2564
29 Ga0068867_100144379 3300005459 Bacteria 1863
30 Ga0070698_100001232 3300005471 Bacteria 28474
31 Ga0070698_100001401 3300005471 Bacteria 26708
32 Ga0070698_100037335 3300005471 Bacteria 5010
33 Ga0070679_100337400 3300005530 Bacteria 1455
34 Ga0070684_100238366 3300005535 Bacteria 1661
35 Ga0068853_100063546 3300005539 Bacteria 3198
36 Ga0070672_100030071 3300005543 Bacteria 4077
37 Ga0070672_100101544 3300005543 Bacteria 2333
38 Ga0068855_100018434 3300005563 Bacteria 8387
39 Ga0068855_100094619 3300005563 Bacteria 3444
40 Ga0070664_100235182 3300005564 Bacteria 1643
41 Ga0068857_100170450 3300005577 Bacteria 1978
42 Ga0068856_100029471 3300005614 Bacteria 5361
43 Ga0068852_100089828 3300005616 Bacteria 2746
44 Ga0068859_100006400 3300005617 Bacteria 11949
45 Ga0068859_100039478 3300005617 Bacteria 4735
46 Ga0068859_100110562 3300005617 Bacteria 2810
47 Ga0068864_100018750 3300005618 Bacteria 5782
48 Ga0068864_100063498 3300005618 Bacteria 3200
49 Ga0068864_100073499 3300005618 Bacteria 2981
50 Ga0068866_10020257 3300005718 Bacteria 3045
51 Ga0068861_100001430 3300005719 Bacteria 15064
52 Ga0068861_100004878 3300005719 Bacteria 9029
53 Ga0068861_100031160 3300005719 Bacteria 3915
54 Ga0068861_100108081 3300005719 Bacteria 2225
55 Ga0068858_100031026 3300005842 Bacteria 4963
56 Ga0068858_100070647 3300005842 Bacteria 3236
57 Ga0068858_100177719 3300005842 Bacteria 2009
58 Ga0068860_100022258 3300005843 Bacteria 6134
59 Ga0068860_100076081 3300005843 Bacteria 3192
60 Ga0068860_100153311 3300005843 Bacteria 2220
61 Ga0068860_100193451 3300005843 Unclassified 1969
62 Ga0068862_100014331 3300005844 Bacteria 6576
63 Ga0068862_100048908 3300005844 Bacteria 3611
64 Ga0068862_100082653 3300005844 Bacteria 2788
65 Ga0081539_10000042 3300005985 Bacteria 289955
66 Ga0075366_10015741 3300006195 Bacteria 4342
67 Ga0097621_100017635 3300006237 Bacteria 5427
68 Ga0097621_100063250 3300006237 Bacteria 3041
69 Ga0097621_100221408 3300006237 Bacteria 1649
70 Ga0075428_100001125 3300006844 Bacteria 28571
71 Ga0075431_100018153 3300006847 Bacteria 7157
72 Ga0075429_100000105 3300006880 Bacteria 47284
73 Ga0097620_100006400 3300006931 Bacteria 11949
74 Ga0097620_100039478 3300006931 Bacteria 4735
75 Ga0097620_100110566 3300006931 Bacteria 2810
76 Ga0105240_10002165 3300009093 Bacteria 32084
77 Ga0111539_10026511 3300009094 Bacteria 7085
78 Ga0111539_10123030 3300009094 Bacteria 3041
79 Ga0105247_10007772 3300009101 Bacteria 6561
80 Ga0105242_10223205 3300009176 Bacteria 1685
81 Ga0105248_10040102 3300009177 Bacteria 5249
82 Ga0105237_10002388 3300009545 Bacteria 23306
83 Ga0105249_10007916 3300009553 Bacteria 9262
84 Ga0105249_10044297 3300009553 Bacteria 4046
85 Ga0105249_10054874 3300009553 Unclassified 3644
86 Ga0105249_10063953 3300009553 Bacteria 3381
87 Ga0105249_10077068 3300009553 Bacteria 3091
88 Ga0105239_10140930 3300010375 Bacteria 2686
89 Ga0105239_10205253 3300010375 Unclassified 2208
90 Ga0157373_10104988 3300013100 Bacteria 1987
91 Ga0157371_10006479 3300013102 Bacteria 9650
92 Ga0157371_10163509 3300013102 Bacteria 1589
93 Ga0157370_10010558 3300013104 Bacteria 9726
94 Ga0157369_10013715 3300013105 Bacteria 9162
95 Ga0157369_10064626 3300013105 Bacteria 3940
96 Ga0157369_10275324 3300013105 Bacteria 1753
97 Ga0157374_10087565 3300013296 Bacteria 2965
98 Ga0157378_10008458 3300013297 Bacteria 8964
99 Ga0157378_10354559 3300013297 Bacteria 1434
100 Ga0163162_10000437 3300013306 Bacteria 38437
101 Ga0163162_10042203 3300013306 Bacteria 4565
102 Ga0163162_10063114 3300013306 Bacteria 3746
103 Ga0163162_10095617 3300013306 Bacteria 3058
104 Ga0163162_10169192 3300013306 Bacteria 2310
105 Ga0157372_10011459 3300013307 Bacteria 9428
106 Ga0157372_10056404 3300013307 Bacteria 4389
107 Ga0157372_10110535 3300013307 Bacteria 3148
108 Ga0157372_10319579 3300013307 Bacteria 1807
109 Ga0157375_10009549 3300013308 Bacteria 8516
110 Ga0157375_10045272 3300013308 Unclassified 4282
111 Ga0163163_10008831 3300014325 Bacteria 8972
112 Ga0163163_10074795 3300014325 Bacteria 3380
113 Ga0157380_10001077 3300014326 Bacteria 17539
114 Ga0157377_10000492 3300014745 Bacteria 16778
115 Ga0157379_10189237 3300014968 Bacteria 1860
116 Ga0163161_10007280 3300017792 Bacteria 7637
117 Ga0163161_10028518 3300017792 Bacteria 3965
118 Ga0163161_10065188 3300017792 Bacteria 2658
119 Ga0207710_10001046 3300025900 Bacteria 14273
120 Ga0207647_10007406 3300025904 Bacteria 7930
121 Ga0207645_10041892 3300025907 Bacteria 2930
122 Ga0207645_10118687 3300025907 Bacteria 1716
123 Ga0207705_10055729 3300025909 Bacteria 2850
124 Ga0207705_10132043 3300025909 Bacteria 1859
125 Ga0207695_10000962 3300025913 Bacteria 51331
126 Ga0207662_10172730 3300025918 Bacteria 1386
127 Ga0207657_10009358 3300025919 Bacteria 9855
128 Ga0207649_10116165 3300025920 Bacteria 1796
129 Ga0207650_10006263 3300025925 Bacteria 8110
130 Ga0207659_10108999 3300025926 Unclassified 2101
131 Ga0207644_10121984 3300025931 Bacteria 1985
132 Ga0207690_10013661 3300025932 Bacteria 4885
133 Ga0207706_10001829 3300025933 Bacteria 20895
134 Ga0207706_10047415 3300025933 Unclassified 3801
135 Ga0207706_10141828 3300025933 Bacteria 2114
136 Ga0207691_10057319 3300025940 Unclassified 3546
137 Ga0207691_10143019 3300025940 Bacteria 2107
138 Ga0207689_10023470 3300025942 Bacteria 5177
139 Ga0207667_10136168 3300025949 Bacteria 2529
140 Ga0207640_10065199 3300025981 Bacteria 2429
141 Ga0207658_10216394 3300025986 Bacteria 1609
142 Ga0207677_10013301 3300026023 Bacteria 4764
143 Ga0207677_10141024 3300026023 Bacteria 1845
144 Ga0207703_10063044 3300026035 Bacteria 3038
145 Ga0207639_10119833 3300026041 Bacteria 2160
146 Ga0207708_10019863 3300026075 Bacteria 5065
147 Ga0207641_10029173 3300026088 Bacteria 4562
148 Ga0207648_10009064 3300026089 Bacteria 9571
149 Ga0207676_10023239 3300026095 Bacteria 4570
150 Ga0207676_10099452 3300026095 Bacteria 2407
151 Ga0207674_10003052 3300026116 Bacteria 20715
152 Ga0207674_10031792 3300026116 Bacteria 5541
153 Ga0207674_10049524 3300026116 Unclassified 4296
154 Ga0207675_100005089 3300026118 Bacteria 12650
155 Ga0207675_100019361 3300026118 Bacteria 6351
156 Ga0207675_100022500 3300026118 Bacteria 5869
157 Ga0207683_10020060 3300026121 Bacteria 5713
158 Ga0207698_10161469 3300026142 Bacteria 1960
159 Ga0268265_10033734 3300028380 Unclassified 3724
160 Ga0268264_10017151 3300028381 Bacteria 5930
161 Ga0268264_10239992 3300028381 Bacteria 1678
162 Ga0265327_10000152 3300031251 Bacteria 149065
163 Ga0265327_10015202 3300031251 Bacteria 4985
164 Ga0307408_100236046 3300031548 Bacteria 1500
165 Ga0307405_10084450 3300031731 Bacteria 2084
166 Ga0307413_10000370 3300031824 Bacteria 14414
167 Ga0307413_10002070 3300031824 Bacteria 8015
168 Ga0307410_10000972 3300031852 Bacteria 12323
169 Ga0307410_10003844 3300031852 Bacteria 7630
170 Ga0307407_10010410 3300031903 Bacteria 4384
171 Ga0307409_100067930 3300031995 Bacteria 2817
172 Ga0307409_100216852 3300031995 Bacteria 1724
173 Ga0307411_10000898 3300032005 Bacteria 11265
174 Ga0307411_10048705 3300032005 Bacteria 2748
175 Ga0307415_100008104 3300032126 Bacteria 5804
176 Ga0307510_10000119 3300033180 Bacteria 62835
177 Ga0395898_0103996 3300037466 Bacteria 2724
178 Ga0436365_1762313 3300039437 Bacteria 1950
179 Ga0439433_0003047 3300041999 Bacteria 3587
180 Ga0439457_004679 3300042014 Bacteria 3538
181 Ga0439457_020624 3300042014 Bacteria 1462
182 Ga0450894_002277 3300042131 Bacteria 2601
183 Ga0439434_0003468 3300042435 Bacteria 4605
184 Ga0466972_0000004 3300044658 Bacteria 314413
185 Ga0453683_0021430 3300044673 Bacteria 4127
186 Ga0466970_0001780 3300044765 Bacteria 10384
187 Ga0495650_0017002 3300046471 Bacteria 3659
188 Ga0495633_0000037 3300046558 Bacteria 184006
189 Ga0495668_0000459 3300046616 Bacteria 52226
190 Ga0495668_0004606 3300046616 Bacteria 9699
191 Ga0496109_0048287 3300048912 Bacteria 3873
192 Ga0501298_002061 3300049521 Bacteria 3013
193 Ga0501034_0000474 3300049571 Bacteria 66190
194 Ga0501072_0000424 3300049588 Bacteria 30227
195 Ga0501217_003301 3300049661 Bacteria 3251
196 Ga0501235_003651 3300049669 Bacteria 3328
197 Ga0501243_000019 3300049675 Bacteria 14232
198 Ga0501259_008230 3300049688 Bacteria 1676
199 Ga0501261_003537 3300049690 Bacteria 1917
200 nmdc:mga0k408_20329_c1 3300050493 Bacteria 3718
201 nmdc:mga09592_5207_c1 3300050508 Bacteria 10567
202 2914760126 2914759650 Bacteria 4701441
203 2958513414 2958512119 Bacteria 4528530
204 rootL2_10203763
205 rootL2_10206117
206 Ga0065707_10086349
207 Ga0070658_10037838
208 Ga0070658_10067185
209 Ga0070676_10045184
210 Ga0070690_100063971
211 Ga0070670_100006973
212 Ga0070670_100045009
213 Ga0070670_100103447
214 Ga0068869_100042592
215 Ga0068868_100019078
216 Ga0068868_100072406
217 Ga0070689_100023646
218 Ga0070689_100042489
219 Ga0070668_100002932
220 Ga0070668_100062920
221 Ga0070669_100003052
222 Ga0070669_100152476
223 Ga0070675_100028751
224 Ga0070671_100219208
225 Ga0070688_100001211
226 Ga0070688_100079073
227 Ga0070659_100017266
228 Ga0070667_100246526
229 Ga0070678_100083404
230 Ga0070681_10035560
231 Ga0070681_10120037
232 Ga0068867_100144379
233 Ga0070698_100001232
234 Ga0070698_100001401
235 Ga0070698_100037335
236 Ga0070679_100337400
237 Ga0070684_100238366
238 Ga0068853_100063546
239 Ga0070672_100030071
240 Ga0070672_100101544
241 Ga0068855_100018434
242 Ga0068855_100094619
243 Ga0070664_100235182
244 Ga0068857_100170450
245 Ga0068856_100029471
246 Ga0068852_100089828
247 Ga0068859_100006400
248 Ga0068859_100039478
249 Ga0068859_100110562
250 Ga0068864_100018750
251 Ga0068864_100063498
252 Ga0068864_100073499
253 Ga0068866_10020257
254 Ga0068861_100001430
255 Ga0068861_100004878
256 Ga0068861_100031160
257 Ga0068861_100108081
258 Ga0068858_100031026
259 Ga0068858_100070647
260 Ga0068858_100177719
261 Ga0068860_100022258
262 Ga0068860_100076081
263 Ga0068860_100153311
264 Ga0068860_100193451
265 Ga0068862_100014331
266 Ga0068862_100048908
267 Ga0068862_100082653
268 Ga0081539_10000042
269 Ga0075366_10015741
270 Ga0097621_100017635
271 Ga0097621_100063250
272 Ga0097621_100221408
273 Ga0075428_100001125
274 Ga0075431_100018153
275 Ga0075429_100000105
276 Ga0097620_100006400
277 Ga0097620_100039478
278 Ga0097620_100110566
279 Ga0105240_10002165
280 Ga0111539_10026511
281 Ga0111539_10123030
282 Ga0105247_10007772
283 Ga0105242_10223205
284 Ga0105248_10040102
285 Ga0105237_10002388
286 Ga0105249_10007916
287 Ga0105249_10044297
288 Ga0105249_10054874
289 Ga0105249_10063953
290 Ga0105249_10077068
291 Ga0105239_10140930
292 Ga0105239_10205253
293 Ga0157373_10104988
294 Ga0157371_10006479
295 Ga0157371_10163509
296 Ga0157370_10010558
297 Ga0157369_10013715
298 Ga0157369_10064626
299 Ga0157369_10275324
300 Ga0157374_10087565
301 Ga0157378_10008458
302 Ga0157378_10354559
303 Ga0163162_10000437
304 Ga0163162_10042203
305 Ga0163162_10063114
306 Ga0163162_10095617
307 Ga0163162_10169192
308 Ga0157372_10011459
309 Ga0157372_10056404
310 Ga0157372_10110535
311 Ga0157372_10319579
312 Ga0157375_10009549
313 Ga0157375_10045272
314 Ga0163163_10008831
315 Ga0163163_10074795
316 Ga0157380_10001077
317 Ga0157377_10000492
318 Ga0157379_10189237
319 Ga0163161_10007280
320 Ga0163161_10028518
321 Ga0163161_10065188
322 Ga0207710_10001046
323 Ga0207647_10007406
324 Ga0207645_10041892
325 Ga0207645_10118687
326 Ga0207705_10055729
327 Ga0207705_10132043
328 Ga0207695_10000962
329 Ga0207662_10172730
330 Ga0207657_10009358
331 Ga0207649_10116165
332 Ga0207650_10006263
333 Ga0207659_10108999
334 Ga0207644_10121984
335 Ga0207690_10013661
336 Ga0207706_10001829
337 Ga0207706_10047415
338 Ga0207706_10141828
339 Ga0207691_10057319
340 Ga0207691_10143019
341 Ga0207689_10023470
342 Ga0207667_10136168
343 Ga0207640_10065199
344 Ga0207658_10216394
345 Ga0207677_10013301
346 Ga0207677_10141024
347 Ga0207703_10063044
348 Ga0207639_10119833
349 Ga0207708_10019863
350 Ga0207641_10029173
351 Ga0207648_10009064
352 Ga0207676_10023239
353 Ga0207676_10099452
354 Ga0207674_10003052
355 Ga0207674_10031792
356 Ga0207674_10049524
357 Ga0207675_100005089
358 Ga0207675_100019361
359 Ga0207675_100022500
360 Ga0207683_10020060
361 Ga0207698_10161469
362 Ga0268265_10033734
363 Ga0268264_10017151
364 Ga0268264_10239992
365 Ga0265327_10000152
366 Ga0265327_10015202
367 Ga0307408_100236046
368 Ga0307405_10084450
369 Ga0307413_10000370
370 Ga0307413_10002070
371 Ga0307410_10000972
372 Ga0307410_10003844
373 Ga0307407_10010410
374 Ga0307409_100067930
375 Ga0307409_100216852
376 Ga0307411_10000898
377 Ga0307411_10048705
378 Ga0307415_100008104
379 Ga0307510_10000119
380 Ga0395898_0103996
381 Ga0436365_1762313
382 Ga0439433_0003047
383 Ga0439457_004679
384 Ga0439457_020624
385 Ga0450894_002277
386 Ga0439434_0003468
387 Ga0466972_0000004
388 Ga0453683_0021430
389 Ga0466970_0001780
390 Ga0495650_0017002
391 Ga0495633_0000037
392 Ga0495668_0000459
393 Ga0495668_0004606
394 Ga0496109_0048287
395 Ga0501298_002061
396 Ga0501034_0000474
397 Ga0501072_0000424
398 Ga0501217_003301
399 Ga0501235_003651
400 Ga0501243_000019
401 Ga0501259_008230
402 Ga0501261_003537
403 nmdc:mga0k408_20329_c1
404 nmdc:mga09592_5207_c1
405 2914760126
406 2958513414

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14821

Thr_synth_N

Threonine synthase N terminus

40

118

0.97

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

123

416

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vb3-assembly1.cif.gz_A crystal structure of threonine synthase from escherichia coli 0.9303 39 470
1vb3-assembly1.cif.gz_A crystal structure of threonine synthase from escherichia coli 0.9282 39 470
4f4f-assembly2.cif.gz_B x-ray crystal structure of plp bound threonine synthase from brucella melitensis 0.923 39 467
1kl7-assembly2.cif.gz_B crystal structure of threonine synthase from yeast 0.9061 37 468
3v7n-assembly1.cif.gz_A crystal structure of threonine synthase (thrc) from from burkholderia thailandensis 0.883 41 466
ID Description Score Start End Superfamily
4f4fB03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9433 141 254 3.40.50.1100
4f4fB01 Alpha Beta;Alpha-Beta Complex;threonine synthase, domain 1, chain A;Threonine synthase, N-terminal domain 0.9299 39 119 3.90.1380.10
1vb3A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9171 255 436 3.40.50.1100
af_Q42598_1_91_3.90.1380.10 Alpha Beta;Alpha-Beta Complex;threonine synthase, domain 1, chain A;Threonine synthase, N-terminal domain 0.8979 35 119 3.90.1380.10
1vb3A03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8954 141 256 3.40.50.1100
ID Description Score Start End GO Terms
AF-A0A2W7S8R4-F1-model_v4 Threonine synthase (EC 4.2.3.1) 0.9936 39 470 GO:0004795
GO:0009088
GO:0030170
AF-A0A4Q3RMR0-F1-model_v4 Threonine synthase 0.9928 39 147
AF-A0A2M9B4C5-F1-model_v4 Threonine synthase (EC 4.2.3.1) 0.9918 39 467 GO:0004795
GO:0009088
GO:0030170
AF-A0A2W7S8R4-F1-model_v4 Threonine synthase (EC 4.2.3.1) 0.9913 39 470 GO:0004795
GO:0009088
GO:0030170
AF-A0A1M3E0L5-F1-model_v4 Threonine synthase (EC 4.2.3.1) 0.9899 39 468 GO:0004795
GO:0009088

Map