F312779

General Info

Members Datasets Scaffolds Average Seq Length
204 171 408 234

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0041996|Ga0395900_0041996_1367_2209
Length 280
Sequence VNQSGWQRRRATSEEELMRTIGLLGGMSWESSIEYYRIINQRVRERLGGYHSARSVMFSFDFHEIEELQQTGDWDQAGRRLADAACRVEAAGADLLVLCTNTMHRLADQVQAAIGIPLLHIADATAQAVRGLAIDRVGLLGTRYTMEQDFYRGRLARHGFQVLVPDPPALQAVHRIIYDELVHGIVRPASRTLYLEVINALTGRGAQAVILGCTEIELLIKDGDADIPLLETARIHAVTAADVAVDHTDPPAPPASAESQAEPQLWVAHGPRPTRGVQGS

Samples

Sample ID Description Type Environment
1 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
60 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
61 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
65 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
66 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
69 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
73 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
74 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
77 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
80 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
83 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
84 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
85 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
86 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
87 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
106 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
107 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
111 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
117 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
118 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
125 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
128 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
129 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
130 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
131 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
138 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
139 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
147 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
160 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
161 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
164 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
165 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
166 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
167 2643221615 Nocardioides sp. Root224 Isolate Unclassified
168 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
169 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
170 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
171 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.08
Metatranscriptomes 0
Isolates 3.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.86
Nodule 0.98
Rhizoplane 1.96
Rhizosphere 84.31
Stem 0
Stem Tuber 0
Unclassified 3.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395900_0041996 3300037418 Bacteria 4712
2 JGI25156J39149_1002861 3300002705 Bacteria 5919
3 rootL2_10125951 3300003322 Bacteria 1852
4 Ga0055532_1001507 3300003758 Bacteria 6381
5 Ga0055524_1003158 3300003775 Bacteria 8114
6 Ga0055530_10002683 3300003791 Bacteria 11086
7 Ga0065707_10246064 3300005295 Bacteria 1140
8 Ga0070670_100486241 3300005331 Bacteria 1097
9 Ga0070680_100137555 3300005336 Bacteria 2047
10 Ga0068868_100198057 3300005338 Bacteria 1673
11 Ga0070689_100857851 3300005340 Bacteria 801
12 Ga0070668_100106085 3300005347 Bacteria 2232
13 Ga0070675_100382784 3300005354 Bacteria 1253
14 Ga0070659_100119928 3300005366 Bacteria 2129
15 Ga0070709_10196470 3300005434 Bacteria 1426
16 Ga0070705_100083282 3300005440 Bacteria 1971
17 Ga0070700_100074298 3300005441 Unclassified 2178
18 Ga0070694_100147915 3300005444 Bacteria 1713
19 Ga0070694_100292290 3300005444 Bacteria 1246
20 Ga0070662_100163141 3300005457 Bacteria 1744
21 Ga0070662_100205928 3300005457 Bacteria 1563
22 Ga0068867_100811255 3300005459 Bacteria 835
23 Ga0070698_100224985 3300005471 Bacteria 1809
24 Ga0070698_100334944 3300005471 Unclassified 1444
25 Ga0070699_100127824 3300005518 Bacteria 2239
26 Ga0070679_100473674 3300005530 Bacteria 1196
27 Ga0070672_100732171 3300005543 Bacteria 867
28 Ga0070695_100094021 3300005545 Bacteria 2007
29 Ga0070665_100053150 3300005548 Bacteria 4062
30 Ga0070665_100246061 3300005548 Bacteria 1789
31 Ga0070704_100057669 3300005549 Bacteria 2762
32 Ga0068862_100209561 3300005844 Archaea 1761
33 Ga0075365_10329988 3300006038 Bacteria 1074
34 Ga0075364_10002955 3300006051 Bacteria 9591
35 Ga0075362_10180821 3300006177 Bacteria 1022
36 Ga0068865_100130689 3300006881 Bacteria 1881
37 Ga0105245_10371153 3300009098 Bacteria 1422
38 Ga0105243_10347872 3300009148 Bacteria 1360
39 Ga0105242_10804823 3300009176 Bacteria 931
40 Ga0105248_10569404 3300009177 Bacteria 1278
41 Ga0105249_10263824 3300009553 Bacteria 1713
42 Ga0105249_10596384 3300009553 Archaea 1159
43 Ga0105249_10661658 3300009553 Bacteria 1103
44 Ga0105249_10981510 3300009553 Bacteria 913
45 Ga0157380_10029982 3300014326 Bacteria 4162
46 Ga0182008_10037352 3300014497 Bacteria 2429
47 Ga0157376_10238095 3300014969 Bacteria 1694
48 Ga0209147_100045 3300025229 Bacteria 299264
49 Ga0209676_1006624 3300025292 Bacteria 5661
50 Ga0209050_1000339 3300025298 Bacteria 92915
51 Ga0207682_10010985 3300025893 Bacteria 3546
52 Ga0207699_10203256 3300025906 Bacteria 1344
53 Ga0207660_10146737 3300025917 Bacteria 1809
54 Ga0207650_10422507 3300025925 Bacteria 1106
55 Ga0207650_10508136 3300025925 Bacteria 1008
56 Ga0207706_10001606 3300025933 Bacteria 22424
57 Ga0207706_10018288 3300025933 Bacteria 6306
58 Ga0207706_10177412 3300025933 Bacteria 1872
59 Ga0207709_10757534 3300025935 Bacteria 781
60 Ga0207670_10760098 3300025936 Bacteria 805
61 Ga0207691_10216255 3300025940 Bacteria 1663
62 Ga0207691_10683086 3300025940 Bacteria 866
63 Ga0207651_10104641 3300025960 Bacteria 2109
64 Ga0207708_10131218 3300026075 Bacteria 1959
65 Ga0207708_10137882 3300026075 Unclassified 1912
66 Ga0207648_10169931 3300026089 Bacteria 1927
67 Ga0207698_10304009 3300026142 Bacteria 1486
68 Ga0268266_10042392 3300028379 Bacteria 3887
69 Ga0268265_10332529 3300028380 Unclassified 1380
70 Ga0265338_10005881 3300028800 Bacteria 15822
71 Ga0316177_1035831 3300030731 Bacteria 3101
72 Ga0314311_1257269 3300030733 Bacteria 5424
73 Ga0265325_10001226 3300031241 Bacteria 18278
74 Ga0265340_10000570 3300031247 Bacteria 20515
75 Ga0265339_10020145 3300031249 Bacteria 3901
76 Ga0316579_10016897 3300031691 Bacteria 3195
77 Ga0316579_10029970 3300031691 Bacteria 2484
78 Ga0316576_10012417 3300031727 Bacteria 5625
79 Ga0316577_10004383 3300031733 Bacteria 7281
80 Ga0316577_10042332 3300031733 Unclassified 2548
81 Ga0307410_10133797 3300031852 Bacteria 1825
82 Ga0307410_10501396 3300031852 Bacteria 999
83 Ga0326468_10005266 3300031889 Bacteria 1157
84 Ga0307406_10016814 3300031901 Bacteria 4255
85 Ga0307406_10537870 3300031901 Bacteria 954
86 Ga0307409_100798253 3300031995 Bacteria 951
87 Ga0307416_100396562 3300032002 Bacteria 1416
88 Ga0307416_100832649 3300032002 Bacteria 1020
89 Ga0307414_10688875 3300032004 Bacteria 924
90 Ga0307415_100438097 3300032126 Bacteria 1126
91 Ga0316574_0032610 3300035398 Unclassified 3166
92 Ga0316574_0149966 3300035398 Bacteria 1502
93 Ga0373933_0600515 3300035724 Bacteria 723
94 Ga0316582_0002236 3300036647 Bacteria 8999
95 Ga0316582_0005866 3300036647 Bacteria 6386
96 Ga0316582_0009230 3300036647 Bacteria 5342
97 Ga0316582_0117361 3300036647 Bacteria 1778
98 Ga0316582_0444368 3300036647 Bacteria 894
99 Ga0316584_0043553 3300036712 Bacteria 3347
100 Ga0316584_0067039 3300036712 Bacteria 2690
101 Ga0395898_0037657 3300037466 Bacteria 4797
102 Ga0316581_0077105 3300037588 Bacteria 1024
103 Ga0436364_0118814 3300037853 Bacteria 2027
104 Ga0395901_0023643 3300038443 Bacteria 6300
105 Ga0395901_0538095 3300038443 Bacteria 1185
106 Ga0400484_03504 3300038725 Bacteria 1977
107 Ga0400486_23511 3300038742 Bacteria 15451
108 Ga0400483_029863 3300039062 Bacteria 6895
109 Ga0436363_1196525 3300039450 Bacteria 705
110 Ga0439444_0009611 3300042437 Bacteria 1528
111 Ga0439464_0001922 3300042439 Bacteria 5025
112 Ga0451577_0193468 3300042876 Bacteria 1835
113 Ga0451577_0216428 3300042876 Bacteria 1731
114 Ga0451577_0229410 3300042876 Bacteria 1679
115 Ga0466972_0000656 3300044658 Bacteria 16703
116 Ga0466972_0164162 3300044658 Bacteria 1043
117 Ga0466961_0057622 3300044693 Bacteria 2473
118 Ga0466963_0028910 3300044694 Bacteria 3563
119 Ga0466964_0001059 3300044706 Bacteria 9192
120 Ga0466964_0053299 3300044706 Bacteria 1665
121 Ga0453684_0002098 3300044712 Bacteria 50342
122 Ga0453684_0018740 3300044712 Bacteria 10599
123 Ga0453684_0053405 3300044712 Bacteria 5275
124 Ga0453684_0060695 3300044712 Bacteria 4859
125 Ga0466971_0081124 3300044719 Bacteria 1479
126 Ga0466970_0016382 3300044765 Bacteria 3820
127 Ga0466957_0000861 3300044842 Bacteria 15602
128 Ga0466958_0015204 3300045836 Bacteria 4406
129 Ga0466967_0008546 3300045976 Bacteria 7517
130 Ga0495653_0025861 3300046463 Bacteria 4710
131 Ga0495650_0000488 3300046471 Bacteria 60332
132 Ga0495582_0344334 3300046473 Bacteria 858
133 Ga0495605_0000194 3300046474 Bacteria 76134
134 Ga0495662_0024423 3300046476 Bacteria 2916
135 Ga0495664_0042204 3300046477 Bacteria 2700
136 Ga0495584_0000020 3300046491 Bacteria 132682
137 Ga0495607_0011038 3300046501 Bacteria 6033
138 Ga0495583_0008393 3300046506 Bacteria 6321
139 Ga0495606_0000300 3300046507 Bacteria 85461
140 Ga0495606_0026547 3300046507 Bacteria 4127
141 Ga0495628_0044279 3300046516 Bacteria 3541
142 Ga0495631_0027008 3300046518 Bacteria 2630
143 Ga0495632_0033183 3300046519 Bacteria 2652
144 Ga0495637_0000118 3300046520 Bacteria 58203
145 Ga0495643_0004223 3300046522 Bacteria 10170
146 Ga0495644_0000256 3300046523 Bacteria 24532
147 Ga0495652_0300027 3300046529 Bacteria 1168
148 Ga0495654_0098625 3300046530 Bacteria 1347
149 Ga0495665_0024174 3300046531 Bacteria 3264
150 Ga0495640_0214263 3300046533 Bacteria 1216
151 Ga0495645_0012174 3300046543 Bacteria 6058
152 Ga0495668_0034122 3300046616 Bacteria 2856
153 Ga0495634_0053789 3300046642 Bacteria 2695
154 Ga0495611_0019387 3300046648 Bacteria 2921
155 Ga0495635_0053656 3300046663 Bacteria 2777
156 Ga0495661_0000001 3300046665 Bacteria 898372
157 Ga0495646_0042026 3300046680 Bacteria 2807
158 Ga0495613_0063864 3300046689 Bacteria 2693
159 Ga0495670_0027761 3300046691 Bacteria 2806
160 Ga0495671_0019294 3300046692 Bacteria 3607
161 Ga0495649_0006695 3300046694 Bacteria 7147
162 Ga0495600_0042687 3300046809 Bacteria 2956
163 Ga0495660_0006356 3300046810 Bacteria 7000
164 Ga0495674_0116028 3300047319 Bacteria 2265
165 Ga0495672_0024818 3300047320 Bacteria 3854
166 Ga0495680_0068097 3300047322 Bacteria 2720
167 Ga0495683_0062385 3300047323 Bacteria 1844
168 Ga0495675_0049917 3300047444 Bacteria 2659
169 Ga0495679_000174 3300047446 Bacteria 58164
170 Ga0495673_0028792 3300047469 Bacteria 2627
171 Ga0495681_0000217 3300047470 Bacteria 47740
172 Ga0495684_0009180 3300047471 Bacteria 7637
173 Ga0495686_0064915 3300047472 Bacteria 2258
174 Ga0496104_0919644 3300048907 Bacteria 780
175 Ga0496109_0565753 3300048912 Unclassified 1072
176 Ga0496114_0004770 3300048917 Bacteria 10553
177 Ga0496114_0176323 3300048917 Bacteria 1865
178 Ga0496122_0044747 3300048925 Bacteria 3450
179 Ga0495678_088410 3300049459 Bacteria 1096
180 Ga0501032_0119719 3300049569 Bacteria 1741
181 Ga0501039_0085409 3300049575 Bacteria 2458
182 Ga0501041_0025098 3300049577 Bacteria 3582
183 Ga0501046_0178016 3300049580 Bacteria 1592
184 Ga0501048_0113139 3300049582 Bacteria 1917
185 Ga0501072_0010634 3300049588 Bacteria 7009
186 Ga0501075_0155215 3300049591 Bacteria 1745
187 Ga0501076_0152628 3300049592 Bacteria 1879
188 Ga0501044_0262565 3300049823 Bacteria 1665
189 Ga0501045_0032748 3300049824 Bacteria 3767
190 nmdc:mga00v17_176254_c1 3300050491 Bacteria 1379
191 nmdc:mga0yw44_235186_c1 3300050492 Bacteria 1217
192 Ga0500643_003765 3300053087 Bacteria 7113
193 Ga0500608_014017 3300053122 Bacteria 3568
194 Ga0500627_0049373 3300053158 Bacteria 1830
195 Ga0466962_0024469 3300061719 Bacteria 2900
196 Ga0530510_0462846 3300061734 Bacteria 960
197 2513592088 2513237087 Bacteria 5817514
198 2527075512 2526164713 Bacteria 6780608
199 2643916254 2643221581 Bacteria 3893603
200 2644092803 2643221615 Bacteria 5487866
201 2644322416 2643221657 Bacteria 5490246
202 2919131635 2919130084 Bacteria 5301837
203 3001897217 3001892409 Bacteria 6328293
204 8045868122 8045864390 Bacteria 5043873
205 Ga0395900_0041996
206 JGI25156J39149_1002861
207 rootL2_10125951
208 Ga0055532_1001507
209 Ga0055524_1003158
210 Ga0055530_10002683
211 Ga0065707_10246064
212 Ga0070670_100486241
213 Ga0070680_100137555
214 Ga0068868_100198057
215 Ga0070689_100857851
216 Ga0070668_100106085
217 Ga0070675_100382784
218 Ga0070659_100119928
219 Ga0070709_10196470
220 Ga0070705_100083282
221 Ga0070700_100074298
222 Ga0070694_100147915
223 Ga0070694_100292290
224 Ga0070662_100163141
225 Ga0070662_100205928
226 Ga0068867_100811255
227 Ga0070698_100224985
228 Ga0070698_100334944
229 Ga0070699_100127824
230 Ga0070679_100473674
231 Ga0070672_100732171
232 Ga0070695_100094021
233 Ga0070665_100053150
234 Ga0070665_100246061
235 Ga0070704_100057669
236 Ga0068862_100209561
237 Ga0075365_10329988
238 Ga0075364_10002955
239 Ga0075362_10180821
240 Ga0068865_100130689
241 Ga0105245_10371153
242 Ga0105243_10347872
243 Ga0105242_10804823
244 Ga0105248_10569404
245 Ga0105249_10263824
246 Ga0105249_10596384
247 Ga0105249_10661658
248 Ga0105249_10981510
249 Ga0157380_10029982
250 Ga0182008_10037352
251 Ga0157376_10238095
252 Ga0209147_100045
253 Ga0209676_1006624
254 Ga0209050_1000339
255 Ga0207682_10010985
256 Ga0207699_10203256
257 Ga0207660_10146737
258 Ga0207650_10422507
259 Ga0207650_10508136
260 Ga0207706_10001606
261 Ga0207706_10018288
262 Ga0207706_10177412
263 Ga0207709_10757534
264 Ga0207670_10760098
265 Ga0207691_10216255
266 Ga0207691_10683086
267 Ga0207651_10104641
268 Ga0207708_10131218
269 Ga0207708_10137882
270 Ga0207648_10169931
271 Ga0207698_10304009
272 Ga0268266_10042392
273 Ga0268265_10332529
274 Ga0265338_10005881
275 Ga0316177_1035831
276 Ga0314311_1257269
277 Ga0265325_10001226
278 Ga0265340_10000570
279 Ga0265339_10020145
280 Ga0316579_10016897
281 Ga0316579_10029970
282 Ga0316576_10012417
283 Ga0316577_10004383
284 Ga0316577_10042332
285 Ga0307410_10133797
286 Ga0307410_10501396
287 Ga0326468_10005266
288 Ga0307406_10016814
289 Ga0307406_10537870
290 Ga0307409_100798253
291 Ga0307416_100396562
292 Ga0307416_100832649
293 Ga0307414_10688875
294 Ga0307415_100438097
295 Ga0316574_0032610
296 Ga0316574_0149966
297 Ga0373933_0600515
298 Ga0316582_0002236
299 Ga0316582_0005866
300 Ga0316582_0009230
301 Ga0316582_0117361
302 Ga0316582_0444368
303 Ga0316584_0043553
304 Ga0316584_0067039
305 Ga0395898_0037657
306 Ga0316581_0077105
307 Ga0436364_0118814
308 Ga0395901_0023643
309 Ga0395901_0538095
310 Ga0400484_03504
311 Ga0400486_23511
312 Ga0400483_029863
313 Ga0436363_1196525
314 Ga0439444_0009611
315 Ga0439464_0001922
316 Ga0451577_0193468
317 Ga0451577_0216428
318 Ga0451577_0229410
319 Ga0466972_0000656
320 Ga0466972_0164162
321 Ga0466961_0057622
322 Ga0466963_0028910
323 Ga0466964_0001059
324 Ga0466964_0053299
325 Ga0453684_0002098
326 Ga0453684_0018740
327 Ga0453684_0053405
328 Ga0453684_0060695
329 Ga0466971_0081124
330 Ga0466970_0016382
331 Ga0466957_0000861
332 Ga0466958_0015204
333 Ga0466967_0008546
334 Ga0495653_0025861
335 Ga0495650_0000488
336 Ga0495582_0344334
337 Ga0495605_0000194
338 Ga0495662_0024423
339 Ga0495664_0042204
340 Ga0495584_0000020
341 Ga0495607_0011038
342 Ga0495583_0008393
343 Ga0495606_0000300
344 Ga0495606_0026547
345 Ga0495628_0044279
346 Ga0495631_0027008
347 Ga0495632_0033183
348 Ga0495637_0000118
349 Ga0495643_0004223
350 Ga0495644_0000256
351 Ga0495652_0300027
352 Ga0495654_0098625
353 Ga0495665_0024174
354 Ga0495640_0214263
355 Ga0495645_0012174
356 Ga0495668_0034122
357 Ga0495634_0053789
358 Ga0495611_0019387
359 Ga0495635_0053656
360 Ga0495661_0000001
361 Ga0495646_0042026
362 Ga0495613_0063864
363 Ga0495670_0027761
364 Ga0495671_0019294
365 Ga0495649_0006695
366 Ga0495600_0042687
367 Ga0495660_0006356
368 Ga0495674_0116028
369 Ga0495672_0024818
370 Ga0495680_0068097
371 Ga0495683_0062385
372 Ga0495675_0049917
373 Ga0495679_000174
374 Ga0495673_0028792
375 Ga0495681_0000217
376 Ga0495684_0009180
377 Ga0495686_0064915
378 Ga0496104_0919644
379 Ga0496109_0565753
380 Ga0496114_0004770
381 Ga0496114_0176323
382 Ga0496122_0044747
383 Ga0495678_088410
384 Ga0501032_0119719
385 Ga0501039_0085409
386 Ga0501041_0025098
387 Ga0501046_0178016
388 Ga0501048_0113139
389 Ga0501072_0010634
390 Ga0501075_0155215
391 Ga0501076_0152628
392 Ga0501044_0262565
393 Ga0501045_0032748
394 nmdc:mga00v17_176254_c1
395 nmdc:mga0yw44_235186_c1
396 Ga0500643_003765
397 Ga0500608_014017
398 Ga0500627_0049373
399 Ga0466962_0024469
400 Ga0530510_0462846
401 2513592088
402 2527075512
403 2643916254
404 2644092803
405 2644322416
406 2919131635
407 3001897217
408 8045868122

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01177

Asp_Glu_race

Asp/Glu/Hydantoin racemase

24

240

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hqt-assembly1.cif.gz_A crystal structure of an aspartate/glutamate racemase from escherichia coli o157 0.9665 1 232
5elm-assembly2.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9644 1 232
5hqt-assembly1.cif.gz_A crystal structure of an aspartate/glutamate racemase from escherichia coli o157 0.9625 1 232
5elm-assembly2.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9604 1 232
3ojc-assembly1.cif.gz_A crystal structure of a putative asp/glu racemase from yersinia pestis 0.9585 1 229
ID Description Score Start End Superfamily
af_P03813_105_213_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9962 106 213 3.40.50.1860
af_P03813_2_104_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9858 2 103 3.40.50.1860
5ellB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9832 1 103 3.40.50.1860
af_P03813_2_229_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.982 2 227 3.40.50.720
af_P03813_105_213_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9781 106 213 3.40.50.1860
ID Description Score Start End GO Terms
AF-K0DNG1-F1-model_v4 Aspartate racemase 0.9982 1 232 GO:0047661
AF-A0A6S7CLE7-F1-model_v4 L-aspartate/glutamate-specific racemase (EC 5.1.1.13) 0.9976 1 232 GO:0047689
AF-A0A4P8IMZ1-F1-model_v4 Aspartate/glutamate racemase family protein 0.9974 1 228 GO:0047661
AF-A0A107ASH0-F1-model_v4 Aspartate racemase 0.996 1 229 GO:0047661
AF-A0A088UQJ8-F1-model_v4 deleted 0.9957 1 229

Map