F313106

General Info

Members Datasets Scaffolds Average Seq Length
204 164 170 513

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_91811_c1|nmdc:mga06r32_91811_c1_555_2321
Length 562
Sequence MKRRQEIAANSGRDYMARRATTPKLVANPYRIAYPDRAVTRITAKPNPFRRPLMILNRALRRAVRYFPNNTATIHEGRKQSYRELWERAQALSKALSELGARRGDRVAIYLLNSPQFLEVVYACFEIGAVVVPLNTRLAADELVFIINDAACMAFITDEPLRPLAASFSPRLEGVNRYVAINGSNEFSDYETLIARHINDKSSDEGPLEEDLAGLFYTSGTTGLPKGVMLNHRNLWMNAMHSLATRAPEPSSVFLHAAPMFHLATFPAVINNTLIGGAHAILPKFDLKALMEIVERERVTSTVLVPTMINLLISHPDIGKHDLSSLRRITYGASPMPVELLKRAMKVFPGVEFFQGYGQSEASPLLTALMPEDHITEGAERITRRLASCGRPVIGVEVEVVDENDRPVKPGEVGEIVARGPNVMMGYWKRPEETATTLSIDEDGYIYLVDRKKDMIISGGENVYSTEIENVIYQHPGAHEAAVIGVPDEKWGEAVKAIVTLKQGASLSESELIEFCASKLADYKVPKSIEIREGELPKSATGKILKRELREPYWQGRNRRIN

Samples

Sample ID Description Type Environment
1 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
2 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
3 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
4 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
5 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
6 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
7 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
8 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
9 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
10 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
11 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
12 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
13 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
14 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
15 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
16 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
17 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
18 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
19 2904699407
20 2906610324
21 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
22 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
23 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
24 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
25 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
26 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
27 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
28 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
29 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
30 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
31 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
32 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
33 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
34 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
35 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
36 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
37 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
38 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
39 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
40 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
41 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
42 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
43 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
44 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
45 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
46 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
53 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
54 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
61 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
62 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
63 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
76 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
77 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
78 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
99 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
100 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
109 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
156 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
157 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
160 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
161 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
162 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
163 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
164 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.17
Metatranscriptomes 0.99
Isolates 15.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.94
Nodule 18.63
Rhizoplane 1.96
Rhizosphere 72.06
Stem 0
Stem Tuber 0
Unclassified 4.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10027006 3300003320 Bacteria 8959
2 JGI25160J50197_1013168 3300003354 Bacteria 2833
3 Ga0070658_10005139 3300005327 Bacteria 10653
4 Ga0070658_10042496 3300005327 Bacteria 3671
5 Ga0070666_10002784 3300005335 Bacteria 10556
6 Ga0070680_100000874 3300005336 Bacteria 21378
7 Ga0070689_100065871 3300005340 Bacteria 2822
8 Ga0070661_100000176 3300005344 Bacteria 52370
9 Ga0070669_100040549 3300005353 Bacteria 3384
10 Ga0070667_100096835 3300005367 Bacteria 2545
11 Ga0070714_100005224 3300005435 Bacteria 9884
12 Ga0070714_100037837 3300005435 Bacteria 4056
13 Ga0070705_100021651 3300005440 Bacteria 3422
14 Ga0070708_100028812 3300005445 Bacteria 4782
15 Ga0070663_100060342 3300005455 Bacteria 2728
16 Ga0070681_10008675 3300005458 Bacteria 9970
17 Ga0070706_100004797 3300005467 Bacteria 12962
18 Ga0070706_100068026 3300005467 Bacteria 3293
19 Ga0070679_100003349 3300005530 Bacteria 14683
20 Ga0070679_100208538 3300005530 Bacteria 1918
21 Ga0070672_100027681 3300005543 Bacteria 4230
22 Ga0070665_100051691 3300005548 Bacteria 4121
23 Ga0070704_100020881 3300005549 Bacteria 4234
24 Ga0068855_100224760 3300005563 Bacteria 2104
25 Ga0068855_100234334 3300005563 Bacteria 2053
26 Ga0070702_100067609 3300005615 Bacteria 2100
27 Ga0068860_100073634 3300005843 Bacteria 3247
28 Ga0081455_10007864 3300005937 Bacteria 11162
29 Ga0081455_10103787 3300005937 Bacteria 2276
30 Ga0081455_10141366 3300005937 Bacteria 1869
31 Ga0070716_100092510 3300006173 Bacteria 1833
32 Ga0070712_100043706 3300006175 Bacteria 3085
33 Ga0075428_100003862 3300006844 Bacteria 16461
34 Ga0075431_100059899 3300006847 Bacteria 3929
35 Ga0075431_100113673 3300006847 Bacteria 2794
36 Ga0075433_10000096 3300006852 Bacteria 41858
37 Ga0075433_10056091 3300006852 Bacteria 3440
38 Ga0075434_100023180 3300006871 Bacteria 6047
39 Ga0068865_100095459 3300006881 Bacteria 2166
40 Ga0099825_1023273 3300006941 Bacteria 3832
41 Ga0099824_1004142 3300006942 Bacteria 20984
42 Ga0099822_1000454 3300006943 Bacteria 37516
43 Ga0099823_1015137 3300006944 Bacteria 7674
44 Ga0105240_10044742 3300009093 Bacteria 5622
45 Ga0111539_10011307 3300009094 Bacteria 11209
46 Ga0111539_10247866 3300009094 Bacteria 2074
47 Ga0114129_10074803 3300009147 Bacteria 4717
48 Ga0114129_10107305 3300009147 Bacteria 3857
49 Ga0114129_10239830 3300009147 Bacteria 2437
50 Ga0105243_10073931 3300009148 Bacteria 2763
51 Ga0105248_10017612 3300009177 Bacteria 7881
52 Ga0105238_10197495 3300009551 Bacteria 1987
53 Ga0105249_10201899 3300009553 Bacteria 1946
54 Ga0163162_10010050 3300013306 Bacteria 9201
55 Ga0157375_10024500 3300013308 Bacteria 5587
56 Ga0206354_10541771 3300020081 Bacteria 3281
57 Ga0206353_10062650 3300020082 Bacteria 12050
58 Ga0214544_1001813 3300021320 Bacteria 44864
59 Ga0214542_1001236 3300021321 Bacteria 51849
60 Ga0214545_1000924 3300021324 Bacteria 51830
61 Ga0214543_1031084 3300021327 Bacteria 2164
62 Ga0209051_1000353 3300025303 Bacteria 68321
63 Ga0209257_1000022 3300025304 Bacteria 765258
64 Ga0207705_10000039 3300025909 Bacteria 193592
65 Ga0207705_10002511 3300025909 Bacteria 14141
66 Ga0207684_10004347 3300025910 Bacteria 13383
67 Ga0207707_10001966 3300025912 Bacteria 18683
68 Ga0207707_10148530 3300025912 Bacteria 2049
69 Ga0207693_10040471 3300025915 Bacteria 3671
70 Ga0207660_10004109 3300025917 Bacteria 9477
71 Ga0207657_10016552 3300025919 Bacteria 7107
72 Ga0207649_10000031 3300025920 Bacteria 146217
73 Ga0207652_10004563 3300025921 Bacteria 11234
74 Ga0207652_10069651 3300025921 Bacteria 3054
75 Ga0207646_10064004 3300025922 Bacteria 3283
76 Ga0207681_10001710 3300025923 Bacteria 14115
77 Ga0207664_10005458 3300025929 Bacteria 8693
78 Ga0207664_10006599 3300025929 Bacteria 7993
79 Ga0207665_10057054 3300025939 Bacteria 2637
80 Ga0207691_10052656 3300025940 Bacteria 3718
81 Ga0207691_10192977 3300025940 Bacteria 1776
82 Ga0207711_10067315 3300025941 Bacteria 3100
83 Ga0207667_10177465 3300025949 Bacteria 2188
84 Ga0207658_10115660 3300025986 Bacteria 2129
85 Ga0207678_10069493 3300026067 Bacteria 3020
86 Ga0209589_1000001 3300027357 Bacteria 794224
87 Ga0209489_100001 3300027361 Bacteria 794224
88 Ga0209700_100001 3300027363 Bacteria 794224
89 Ga0265338_10017067 3300028800 Bacteria 7848
90 Ga0265331_10000037 3300031250 Bacteria 197251
91 Ga0265331_10006523 3300031250 Bacteria 6885
92 Ga0265327_10000505 3300031251 Bacteria 67742
93 Ga0307513_10100876 3300031456 Bacteria 2910
94 Ga0265314_10004020 3300031711 Bacteria 13904
95 Ga0307413_10008380 3300031824 Bacteria 4878
96 Ga0307416_100182866 3300032002 Bacteria 1967
97 Ga0315911_1000006 3300033442 Bacteria 414563
98 Ga0373926_0011661 3300035083 Bacteria 2962
99 Ga0373931_0010597 3300035691 Bacteria 4433
100 Ga0373935_0021582 3300035692 Bacteria 3944
101 Ga0373927_0009937 3300035695 Bacteria 6375
102 Ga0373947_0000488 3300035725 Bacteria 22824
103 Ga0316584_0045164 3300036712 Bacteria 3288
104 Ga0373925_0001046 3300037068 Bacteria 25096
105 Ga0395899_0006567 3300037312 Bacteria 9018
106 Ga0395899_0026739 3300037312 Bacteria 4353
107 Ga0395900_0013713 3300037418 Bacteria 8273
108 Ga0395898_0017354 3300037466 Bacteria 7353
109 Ga0395905_0004426 3300037471 Bacteria 14603
110 Ga0395901_0046473 3300038443 Bacteria 4509
111 Ga0466963_0004385 3300044694 Bacteria 8197
112 Ga0496102_0119489 3300048905 Bacteria 2461
113 Ga0496107_0165419 3300048910 Bacteria 1640
114 Ga0496112_0091051 3300048915 Bacteria 3019
115 Ga0496126_0000499 3300048929 Bacteria 77190
116 Ga0501031_0046887 3300049568 Bacteria 2818
117 Ga0501032_0050607 3300049569 Bacteria 2802
118 Ga0501032_0055087 3300049569 Bacteria 2676
119 Ga0501034_0094323 3300049571 Bacteria 2989
120 Ga0501036_0017017 3300049572 Bacteria 6076
121 Ga0501038_0035951 3300049574 Bacteria 4347
122 Ga0501039_0027351 3300049575 Bacteria 4385
123 Ga0501040_0081928 3300049576 Bacteria 2236
124 Ga0501041_0037428 3300049577 Bacteria 2940
125 Ga0501042_0004071 3300049578 Bacteria 9277
126 Ga0501043_0029776 3300049579 Bacteria 4290
127 Ga0501043_0103649 3300049579 Bacteria 2235
128 Ga0501046_0021594 3300049580 Bacteria 5312
129 Ga0501046_0028310 3300049580 Bacteria 4565
130 Ga0501069_0115677 3300049585 Bacteria 1530
131 Ga0501070_0000018 3300049586 Bacteria 172755
132 Ga0501070_0004805 3300049586 Bacteria 11552
133 Ga0501070_0020990 3300049586 Bacteria 5478
134 Ga0501071_0053741 3300049587 Bacteria 2905
135 Ga0501072_0001976 3300049588 Bacteria 15272
136 Ga0501072_0019259 3300049588 Bacteria 5273
137 Ga0501075_0005442 3300049591 Bacteria 8707
138 Ga0501077_0001664 3300049593 Bacteria 13370
139 Ga0501077_0030921 3300049593 Bacteria 3407
140 Ga0501079_0003598 3300049741 Bacteria 11396
141 Ga0501080_0022040 3300049742 Bacteria 5901
142 Ga0501080_0070853 3300049742 Bacteria 3242
143 Ga0501080_0071194 3300049742 Bacteria 3234
144 Ga0501081_0134238 3300049743 Bacteria 1770
145 Ga0501035_0002120 3300049822 Bacteria 19738
146 Ga0501035_0115619 3300049822 Bacteria 2348
147 Ga0501044_0001197 3300049823 Bacteria 30762
148 Ga0501044_0001893 3300049823 Bacteria 24236
149 Ga0501044_0018379 3300049823 Bacteria 7490
150 Ga0501045_0031980 3300049824 Bacteria 3811
151 Ga0501045_0121266 3300049824 Bacteria 1942
152 nmdc:mga05p37_240204_c1 3300050507 Bacteria 2178
153 nmdc:mga05p37_33536_c1 3300050507 Bacteria 6288
154 nmdc:mga05p37_49602_c2 3300050507 Bacteria 2390
155 nmdc:mga06r32_197437_c1 3300050510 Bacteria 1999
156 nmdc:mga06r32_41920_c1 3300050510 Bacteria 4350
157 nmdc:mga06r32_91811_c1 3300050510 Bacteria 2968
158 nmdc:mga08y16_33727_c1 3300050511 Bacteria 5376
159 nmdc:mga08y16_8940_c1 3300050511 Bacteria 10518
160 nmdc:mga0n895_1793_c1 3300050512 Bacteria 16310
161 nmdc:mga0n895_335210_c1 3300050512 Bacteria 1532
162 nmdc:mga0a205_51540_c1 3300050515 Bacteria 3973
163 nmdc:mga0a205_82_c1 3300050515 Bacteria 52579
164 Ga0495601_0045879 3300053077 Bacteria 2750
165 Ga0500617_031366 3300053124 Bacteria 2376
166 Ga0500658_0011264 3300053134 Bacteria 3293
167 Ga0500588_0013034 3300053146 Bacteria 2077
168 Ga0501082_0098056 3300060353 Bacteria 2534
169 Ga0530510_0038831 3300061734 Bacteria 3438
170 Ga0530510_0102425 3300061734 Bacteria 2094

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049585 Ga0501069_0115677 Ga0501069_0115677_234_1517 422
2 iso_pu_bacteria 2667528175 2671121929 429
3 iso_pu_bacteria 2524023228 2524534106 431
4 iso_pu_bacteria 2791355197 2793068892 431
5 iso_pu_bacteria 8006973647 8006979966 431
6 3300006942 Ga0099824_1004142 Ga0099824_100414212 435
7 3300006943 Ga0099822_1000454 Ga0099822_100045429 435
8 3300027357 Ga0209589_1000001 Ga0209589_1000001304 435
9 3300027361 Ga0209489_100001 Ga0209489_100001304 435
10 3300027363 Ga0209700_100001 Ga0209700_100001304 435
11 iso_pu_bacteria 2728368998 2728753028 437
12 3300005937 Ga0081455_10103787 Ga0081455_101037872 443
13 3300033442 Ga0315911_1000006 Ga0315911_1000006384 443
14 iso_pu_bacteria 2513237137 2513855485 449
15 iso_pu_bacteria 2513237096 2513657045 453
16 iso_pu_bacteria 2513237145 2513918785 453
17 3300050512 nmdc:mga0n895_335210_c1 nmdc:mga0n895_335210_c1_41_1420 454
18 3300005455 Ga0070663_100060342 Ga0070663_1000603422 476
19 3300026067 Ga0207678_10069493 Ga0207678_100694933 476
20 3300035083 Ga0373926_0011661 Ga0373926_0011661_649_2154 484
21 3300035692 Ga0373935_0021582 Ga0373935_0021582_1638_3143 484
22 3300035695 Ga0373927_0009937 Ga0373927_0009937_229_1734 484
23 3300035725 Ga0373947_0000488 Ga0373947_0000488_10955_12460 484
24 3300037068 Ga0373925_0001046 Ga0373925_0001046_19597_21102 484
25 3300025910 Ga0207684_10004347 Ga0207684_1000434711 485
26 3300005435 Ga0070714_100005224 Ga0070714_1000052245 490
27 3300025929 Ga0207664_10006599 Ga0207664_100065999 490
28 3300005467 Ga0070706_100004797 Ga0070706_1000047972 491
29 3300025922 Ga0207646_10064004 Ga0207646_100640042 491
30 3300050511 nmdc:mga08y16_33727_c1 nmdc:mga08y16_33727_c1_2191_3750 492
31 3300009553 Ga0105249_10201899 Ga0105249_102018992 493
32 3300049824 Ga0501045_0121266 Ga0501045_0121266_291_1787 493
33 3300005937 Ga0081455_10007864 Ga0081455_100078646 494
34 3300009147 Ga0114129_10239830 Ga0114129_102398302 497
35 3300050510 nmdc:mga06r32_91811_c1 nmdc:mga06r32_91811_c1_555_2321 497
36 3300005445 Ga0070708_100028812 Ga0070708_1000288123 499
37 3300053077 Ga0495601_0045879 Ga0495601_0045879_1154_2659 499
38 iso_pu_bacteria 8019538911 8019546032 499
39 3300005937 Ga0081455_10141366 Ga0081455_101413661 500
40 3300050507 nmdc:mga05p37_240204_c1 nmdc:mga05p37_240204_c1_186_1745 502
41 iso_pu_bacteria 2837268691 2837273495 503
42 3300048915 Ga0496112_0091051 Ga0496112_0091051_1212_2732 504
43 3300006871 Ga0075434_100023180 Ga0075434_1000231804 506
44 3300009147 Ga0114129_10107305 Ga0114129_101073054 506
45 3300025940 Ga0207691_10192977 Ga0207691_101929771 506
46 3300005327 Ga0070658_10005139 Ga0070658_100051392 507
47 3300005336 Ga0070680_100000874 Ga0070680_10000087410 507
48 3300005458 Ga0070681_10008675 Ga0070681_100086759 507
49 3300005530 Ga0070679_100003349 Ga0070679_10000334916 507
50 3300009094 Ga0111539_10011307 Ga0111539_100113077 507
51 3300020081 Ga0206354_10541771 Ga0206354_105417712 507
52 3300020082 Ga0206353_10062650 Ga0206353_100626503 507
53 3300025909 Ga0207705_10002511 Ga0207705_100025116 507
54 3300025912 Ga0207707_10001966 Ga0207707_1000196615 507
55 3300025917 Ga0207660_10004109 Ga0207660_100041092 507
56 3300025921 Ga0207652_10004563 Ga0207652_1000456311 507
57 3300048929 Ga0496126_0000499 Ga0496126_0000499_62499_64109 507
58 iso_pu_bacteria 2517572143 2517892033 507
59 iso_pu_bacteria 2885374607 2885375982 507
60 iso_pu_bacteria 2903748898 2903753791 507
61 iso_pu_bacteria 2904690495 2904694910 507
62 iso_pu_bacteria 2904699407 2904702130 507
63 iso_pu_bacteria 2906610324 2906617157 507
64 iso_pu_bacteria 2906635258 2906639222 507
65 iso_pu_bacteria 2906660503 2906662421 507
66 iso_pu_bacteria 2908739725 2908742308 507
67 iso_pu_bacteria 2908756301 2908759949 507
68 iso_pu_bacteria 2935630451 2935636386 507
69 iso_pu_bacteria 2941507105 2941509904 507
70 iso_pu_bacteria 2941515067 2941520852 507
71 iso_pu_bacteria 2941523033 2941525303 507
72 iso_pu_bacteria 3005474847 3005480588 507
73 iso_pu_bacteria 8006933436 8006940186 507
74 iso_pu_bacteria 8019555841 8019556161 507
75 iso_pu_bacteria 8056689827 8056692208 507
76 3300006852 Ga0075433_10056091 Ga0075433_100560913 508
77 3300049568 Ga0501031_0046887 Ga0501031_0046887_658_2244 508
78 3300049572 Ga0501036_0017017 Ga0501036_0017017_107_1693 508
79 3300049574 Ga0501038_0035951 Ga0501038_0035951_1924_3510 508
80 3300049575 Ga0501039_0027351 Ga0501039_0027351_2016_3602 508
81 3300049576 Ga0501040_0081928 Ga0501040_0081928_508_2094 508
82 3300049577 Ga0501041_0037428 Ga0501041_0037428_562_2148 508
83 3300049578 Ga0501042_0004071 Ga0501042_0004071_5759_7345 508
84 3300049580 Ga0501046_0028310 Ga0501046_0028310_776_2362 508
85 3300049587 Ga0501071_0053741 Ga0501071_0053741_921_2507 508
86 3300049588 Ga0501072_0001976 Ga0501072_0001976_4842_6428 508
87 3300049591 Ga0501075_0005442 Ga0501075_0005442_630_2216 508
88 3300049593 Ga0501077_0001664 Ga0501077_0001664_10233_11819 508
89 3300049741 Ga0501079_0003598 Ga0501079_0003598_3300_4886 508
90 3300049742 Ga0501080_0070853 Ga0501080_0070853_1010_2596 508
91 3300049743 Ga0501081_0134238 Ga0501081_0134238_84_1670 508
92 3300049824 Ga0501045_0031980 Ga0501045_0031980_283_1869 508
93 3300050507 nmdc:mga05p37_49602_c2 nmdc:mga05p37_49602_c2_748_2307 508
94 3300050515 nmdc:mga0a205_51540_c1 nmdc:mga0a205_51540_c1_1657_3216 508
95 3300060353 Ga0501082_0098056 Ga0501082_0098056_518_2104 508
96 3300061734 Ga0530510_0038831 Ga0530510_0038831_1661_3247 508
97 3300005549 Ga0070704_100020881 Ga0070704_1000208812 510
98 3300005615 Ga0070702_100067609 Ga0070702_1000676092 510
99 3300006173 Ga0070716_100092510 Ga0070716_1000925102 510
100 3300006175 Ga0070712_100043706 Ga0070712_1000437063 510
101 3300006881 Ga0068865_100095459 Ga0068865_1000954592 510
102 3300025915 Ga0207693_10040471 Ga0207693_100404712 510
103 3300025939 Ga0207665_10057054 Ga0207665_100570542 510
104 3300035691 Ga0373931_0010597 Ga0373931_0010597_2291_3844 510
105 3300048910 Ga0496107_0165419 Ga0496107_0165419_19_1584 510
106 3300006847 Ga0075431_100113673 Ga0075431_1001136733 511
107 3300006941 Ga0099825_1023273 Ga0099825_10232732 511
108 3300053134 Ga0500658_0011264 Ga0500658_0011264_1299_2855 511
109 3300005340 Ga0070689_100065871 Ga0070689_1000658712 512
110 3300036712 Ga0316584_0045164 Ga0316584_0045164_1205_2761 512
111 3300037312 Ga0395899_0026739 Ga0395899_0026739_1741_3300 512
112 3300044694 Ga0466963_0004385 Ga0466963_0004385_308_1867 512
113 3300005353 Ga0070669_100040549 Ga0070669_1000405493 513
114 3300005440 Ga0070705_100021651 Ga0070705_1000216513 513
115 3300005467 Ga0070706_100068026 Ga0070706_1000680263 513
116 3300005543 Ga0070672_100027681 Ga0070672_1000276816 513
117 3300005843 Ga0068860_100073634 Ga0068860_1000736344 513
118 3300006844 Ga0075428_100003862 Ga0075428_1000038624 513
119 3300006847 Ga0075431_100059899 Ga0075431_1000598992 513
120 3300009094 Ga0111539_10247866 Ga0111539_102478662 513
121 3300009148 Ga0105243_10073931 Ga0105243_100739313 513
122 3300013306 Ga0163162_10010050 Ga0163162_100100502 513
123 3300013308 Ga0157375_10024500 Ga0157375_100245005 513
124 3300025923 Ga0207681_10001710 Ga0207681_100017108 513
125 3300025940 Ga0207691_10052656 Ga0207691_100526566 513
126 3300048905 Ga0496102_0119489 Ga0496102_0119489_242_1798 513
127 3300049588 Ga0501072_0019259 Ga0501072_0019259_2520_4076 513
128 3300049593 Ga0501077_0030921 Ga0501077_0030921_486_2042 513
129 3300050510 nmdc:mga06r32_197437_c1 nmdc:mga06r32_197437_c1_267_1826 513
130 3300050510 nmdc:mga06r32_41920_c1 nmdc:mga06r32_41920_c1_1006_2562 513
131 3300050511 nmdc:mga08y16_8940_c1 nmdc:mga08y16_8940_c1_4896_6452 513
132 3300061734 Ga0530510_0102425 Ga0530510_0102425_212_1768 513
133 3300032002 Ga0307416_100182866 Ga0307416_1001828662 514
134 3300031456 Ga0307513_10100876 Ga0307513_101008763 515
135 3300006852 Ga0075433_10000096 Ga0075433_1000009614 516
136 3300009147 Ga0114129_10074803 Ga0114129_100748032 516
137 3300025303 Ga0209051_1000353 Ga0209051_100035354 516
138 3300025304 Ga0209257_1000022 Ga0209257_1000022489 516
139 3300037312 Ga0395899_0006567 Ga0395899_0006567_5065_6621 516
140 3300037418 Ga0395900_0013713 Ga0395900_0013713_3375_4931 516
141 3300037466 Ga0395898_0017354 Ga0395898_0017354_3136_4692 516
142 3300038443 Ga0395901_0046473 Ga0395901_0046473_292_1848 516
143 3300050507 nmdc:mga05p37_33536_c1 nmdc:mga05p37_33536_c1_4114_5703 516
144 3300050512 nmdc:mga0n895_1793_c1 nmdc:mga0n895_1793_c1_14152_15741 516
145 3300050515 nmdc:mga0a205_82_c1 nmdc:mga0a205_82_c1_2467_4056 516
146 3300005435 Ga0070714_100037837 Ga0070714_1000378372 517
147 3300025929 Ga0207664_10005458 Ga0207664_100054586 517
148 3300053124 Ga0500617_031366 Ga0500617_031366_674_2248 519
149 3300053146 Ga0500588_0013034 Ga0500588_0013034_260_1834 519
150 iso_pu_bacteria 2838122688 2838130476 519
151 iso_pu_bacteria 2841941048 2841948124 519
152 iso_pu_bacteria 2841949485 2841953481 519
153 iso_pu_bacteria 2841966195 2841972042 519
154 iso_pu_bacteria 2841974524 2841978210 519
155 iso_pu_bacteria 2841983080 2841990988 519
156 3300003354 JGI25160J50197_1013168 JGI25160J50197_10131681 522
157 3300006944 Ga0099823_1015137 Ga0099823_10151373 522
158 3300021320 Ga0214544_1001813 Ga0214544_100181339 522
159 3300021321 Ga0214542_1001236 Ga0214542_10012361 522
160 3300021324 Ga0214545_1000924 Ga0214545_100092444 522
161 3300021327 Ga0214543_1031084 Ga0214543_10310841 522
162 3300037471 Ga0395905_0004426 Ga0395905_0004426_10762_12339 522
163 3300005548 Ga0070665_100051691 Ga0070665_1000516913 523
164 3300031250 Ga0265331_10000037 Ga0265331_10000037100 523
165 3300031824 Ga0307413_10008380 Ga0307413_100083803 523
166 3300003320 rootH2_10027006 rootH2_100270063 524
167 3300005327 Ga0070658_10042496 Ga0070658_100424961 524
168 3300005335 Ga0070666_10002784 Ga0070666_100027843 524
169 3300005344 Ga0070661_100000176 Ga0070661_10000017618 524
170 3300005367 Ga0070667_100096835 Ga0070667_1000968352 524
171 3300005530 Ga0070679_100208538 Ga0070679_1002085382 524
172 3300005563 Ga0068855_100224760 Ga0068855_1002247602 524
173 3300005563 Ga0068855_100234334 Ga0068855_1002343342 524
174 3300009093 Ga0105240_10044742 Ga0105240_100447423 524
175 3300009177 Ga0105248_10017612 Ga0105248_100176121 524
176 3300009551 Ga0105238_10197495 Ga0105238_101974951 524
177 3300025909 Ga0207705_10000039 Ga0207705_1000003910 524
178 3300025912 Ga0207707_10148530 Ga0207707_101485302 524
179 3300025919 Ga0207657_10016552 Ga0207657_100165527 524
180 3300025920 Ga0207649_10000031 Ga0207649_1000003125 524
181 3300025921 Ga0207652_10069651 Ga0207652_100696512 524
182 3300025941 Ga0207711_10067315 Ga0207711_100673151 524
183 3300025949 Ga0207667_10177465 Ga0207667_101774652 524
184 3300025986 Ga0207658_10115660 Ga0207658_101156602 524
185 3300028800 Ga0265338_10017067 Ga0265338_100170677 524
186 3300031250 Ga0265331_10006523 Ga0265331_100065235 524
187 3300031251 Ga0265327_10000505 Ga0265327_1000050514 524
188 3300031711 Ga0265314_10004020 Ga0265314_1000402010 524
189 3300049569 Ga0501032_0050607 Ga0501032_0050607_784_2361 524
190 3300049569 Ga0501032_0055087 Ga0501032_0055087_197_1771 524
191 3300049571 Ga0501034_0094323 Ga0501034_0094323_700_2277 524
192 3300049579 Ga0501043_0029776 Ga0501043_0029776_2220_3797 524
193 3300049579 Ga0501043_0103649 Ga0501043_0103649_422_1996 524
194 3300049580 Ga0501046_0021594 Ga0501046_0021594_1584_3161 524
195 3300049586 Ga0501070_0000018 Ga0501070_0000018_50897_52471 524
196 3300049586 Ga0501070_0004805 Ga0501070_0004805_195_1772 524
197 3300049586 Ga0501070_0020990 Ga0501070_0020990_939_2525 524
198 3300049742 Ga0501080_0022040 Ga0501080_0022040_1613_3190 524
199 3300049742 Ga0501080_0071194 Ga0501080_0071194_775_2349 524
200 3300049822 Ga0501035_0002120 Ga0501035_0002120_2164_3738 524
201 3300049822 Ga0501035_0115619 Ga0501035_0115619_353_1930 524
202 3300049823 Ga0501044_0001197 Ga0501044_0001197_3507_5081 524
203 3300049823 Ga0501044_0001893 Ga0501044_0001893_21375_22949 524
204 3300049823 Ga0501044_0018379 Ga0501044_0018379_3339_4916 524

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

467

543

0.96

PF00501

AMP-binding

AMP-binding enzyme

60

428

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3t5c-assembly2.cif.gz_B crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis in different space group c2 0.9388 6 413
3t5c-assembly2.cif.gz_B crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis in different space group c2 0.9365 6 413
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.9353 6 415
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.933 6 415
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.9289 8 414
ID Description Score Start End Superfamily
af_Q9LQS1_441_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.971 417 515 3.30.300.30
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9684 417 514 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.967 418 512 3.30.300.30
af_O05295_375_473_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9639 417 511 3.30.300.30
af_Q9VXZ8_496_596_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9616 418 515 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A2K3LEK0-F1-model_v4 4-coumarate-CoA ligase 7-like protein 0.9664 426 511 GO:0016405
AF-A0A2E4XRB8-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9658 420 515 GO:0006631
GO:0031956
AF-A0A3A8NSF7-F1-model_v4 Long-chain-fatty-acid--CoA ligase 0.9654 3 524 GO:0005524
GO:0016877
AF-A0A381ZGD2-F1-model_v4 Long-chain-fatty-acid--CoA ligase 0.9627 7 523 GO:0005524
GO:0016405
AF-A0A7K0MYV2-F1-model_v4 Fatty acid--CoA ligase family protein 0.961 415 515 GO:0006631
GO:0031956

Feature Viewer

pLDDT pTM Quality
90.13 0.87 High
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Predicted Structure (AlphaFold2)

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