F313176

General Info

Members Datasets Scaffolds Average Seq Length
204 169 408 744

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221613|2644084448
Length 798
Sequence YQCMVFSNRPTTACSDRFDRTVRATVVVSEGTPHMSDLLPYQDPSRPVAERVADLVGRMTLPEKVGQMMQLNAADGVERLVNEVHVGSILHTSPENALLAHELTSRSRLQIPLLIAEDCIHGHSFWLGATIYPTQLGMAATWSAELLERVARATAVEVAATGIHWTFSPVLCITRDLRWGRVSETFGEDPFLIGELASAMVRGYQGDGLDDPTAILATAKHFAGYSETQGGRDATEADISRRKLRSWFLPPFERVAREGCRTFMLGYQSMDGVPITVNEWLLSDVLRGEWGYTGTLVTDWDNVGRMVWEQHIQPDHTHAAAAAVRAGNDMVMTTPQFFEGAQEAVRQGLLDEAQLDAAVARILALKFELGLFENPRRPDPERQAQVVGSSEHADLNLEVARRSLVLLTNDGTLPLDGGLVAGPDGRAAAASAGAPTRRIAVVGPNADDPHTQQGDWAGASGQVDWLPDGHPREMTQTVLDGFRDHVPASWEVTHARGADILTLVPDPEGELFPDGQPRPQVVQPAEPDAAMIAEAVASARDADLVVAVVGDRIELVGEGRSTATLDLVGAQVALLDALAETGTPLVVVVVASKPLVLPPSARDAAAIVWAANPGMRGGRAVAELVLGLIEPSGRLPLSFAEHVGQLPVFYNQLPGQHGTRYADLTQRPPFAFGEGLSYTTVEYADLSVLDAVVGREDTVRAQVTVSNTGTRPARETVQVYVRDTVTSVTWAEKELKAYRQVDLAPGESQVVDLEVAVADCTLVDAQGRRVVEPGAFELLVGPSSRDEVLLVGEFTVKG

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
4 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
5 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
19 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
20 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
30 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
31 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
34 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
41 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
42 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
43 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
44 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
47 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
48 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
51 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
54 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
55 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
56 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
57 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
61 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
62 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
63 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
71 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
72 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
73 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
74 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
75 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
76 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
79 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
80 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
81 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
82 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
83 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
84 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
85 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
86 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
87 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
88 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
98 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
101 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
102 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
103 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 2643221613 Oerskovia sp. Root22 Isolate Unclassified
106 2558860280 Kutzneria sp. 744 Isolate Unclassified
107 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
108 2643221548 Streptomyces sp. Root55 Isolate Unclassified
109 2643221553 Microbacterium sp. Root553 Isolate Unclassified
110 2643221566 Microbacterium sp. Root166 Isolate Unclassified
111 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
112 2643221572 Leifsonia sp. Root60 Isolate Unclassified
113 2643221578 Streptomyces sp. Root63 Isolate Unclassified
114 2643221597 Microbacterium sp. Root180 Isolate Unclassified
115 2643221616 Leifsonia sp. Root227 Isolate Unclassified
116 2643221619 Agromyces sp. Root81 Isolate Unclassified
117 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
118 2643221630 Microbacterium sp. Root322 Isolate Unclassified
119 2643221647 Streptomyces sp. Root369 Isolate Unclassified
120 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
121 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
122 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
123 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
124 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
125 2643221714 Streptomyces sp. Root264 Isolate Unclassified
126 2643221721 Oerskovia sp. Root918 Isolate Unclassified
127 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
128 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
129 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
130 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
131 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
132 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
133 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
134 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
135 2773857759 Microbacterium sp. 1294 Isolate Unclassified
136 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
137 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
138 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
139 2808606394 Promicromonospora sp. C35 Isolate Unclassified
140 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
141 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
142 2836160341 Unclassified Planctomycetes Bin 134 Isolate Unclassified
143 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
144 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
145 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
146 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
147 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
148 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
149 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
150 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
151 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
152 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
153 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
154 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
155 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
156 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
157 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
158 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
159 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
160 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
161 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
162 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
163 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
164 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
165 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
166 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
167 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
168 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
169 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.65
Metatranscriptomes 0.49
Isolates 31.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.73
Nodule 0
Rhizoplane 2.45
Rhizosphere 45.59
Stem 0
Stem Tuber 0.49
Unclassified 0.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000055 3300003214 Bacteria 224187
2 Ga0007423J48922_100414 3300003285 Bacteria 3540
3 Ga0055539_1000091 3300003752 Bacteria 109254
4 Ga0055533_1000001 3300003756 Bacteria 1863437
5 Ga0055525_1000289 3300003759 Bacteria 45318
6 Ga0055527_1000003 3300003760 Bacteria 705001
7 Ga0055542_1000005 3300003762 Bacteria 550280
8 Ga0055529_1000006 3300003763 Bacteria 416978
9 Ga0065714_10009600 3300005288 Bacteria 3192
10 Ga0070668_100000964 3300005347 Bacteria 20121
11 Ga0070668_100026317 3300005347 Bacteria 4414
12 Ga0070710_10000159 3300005437 Bacteria 31216
13 Ga0068853_100030237 3300005539 Bacteria 4574
14 Ga0068855_100017604 3300005563 Bacteria 8593
15 Ga0068856_100059809 3300005614 Bacteria 3764
16 Ga0068860_100000255 3300005843 Bacteria 78861
17 Ga0068860_100041311 3300005843 Bacteria 4405
18 Ga0075364_10006348 3300006051 Bacteria 6945
19 Ga0075367_10001223 3300006178 Bacteria 10772
20 Ga0105243_10006417 3300009148 Bacteria 9089
21 Ga0105239_10147907 3300010375 Bacteria 2621
22 Ga0105246_10003369 3300011119 Bacteria 9675
23 Ga0157369_10032220 3300013105 Bacteria 5765
24 Ga0171462_1004 3300013250 Bacteria 678877
25 Ga0157372_10055126 3300013307 Bacteria 4438
26 Ga0209566_100055 3300025225 Bacteria 210307
27 Ga0209674_100001 3300025226 Bacteria 4013750
28 Ga0209672_100003 3300025228 Bacteria 1560476
29 Ga0209147_100273 3300025229 Bacteria 46327
30 Ga0209563_100001 3300025230 Bacteria 4013775
31 Ga0209563_100274 3300025230 Bacteria 21935
32 Ga0207427_100054 3300025231 Bacteria 216315
33 Ga0209646_1000085 3300025246 Bacteria 197351
34 Ga0209677_100001 3300025253 Bacteria 4013787
35 Ga0209148_1000004 3300025254 Bacteria 1844481
36 Ga0209233_1000001 3300025261 Bacteria 2992747
37 Ga0209455_1000046 3300025272 Bacteria 382681
38 Ga0209455_1000867 3300025272 Bacteria 16045
39 Ga0207692_10002419 3300025898 Bacteria 7159
40 Ga0207652_10085849 3300025921 Bacteria 2759
41 Ga0207709_10003818 3300025935 Bacteria 8845
42 Ga0207668_10000796 3300025972 Bacteria 19339
43 Ga0207668_10018950 3300025972 Bacteria 4339
44 Ga0268264_10000649 3300028381 Bacteria 40993
45 Ga0268264_10015718 3300028381 Bacteria 6199
46 Ga0265319_1005002 3300028563 Bacteria 6452
47 Ga0307515_10000598 3300028794 Bacteria 84186
48 Ga0307515_10015411 3300028794 Bacteria 14086
49 Ga0307511_10000401 3300030521 Bacteria 46025
50 Ga0307512_10003328 3300030522 Bacteria 18859
51 Ga0307512_10013654 3300030522 Bacteria 7603
52 Ga0265331_10022630 3300031250 Bacteria 3205
53 Ga0265316_10001833 3300031344 Bacteria 22364
54 Ga0265316_10011158 3300031344 Bacteria 8128
55 Ga0307509_10018472 3300031507 Bacteria 7996
56 Ga0307508_10021323 3300031616 Bacteria 5890
57 Ga0307508_10035555 3300031616 Bacteria 4489
58 Ga0265342_10002551 3300031712 Bacteria 15647
59 Ga0265342_10030892 3300031712 Bacteria 3316
60 Ga0316576_10037285 3300031727 Unclassified 3480
61 Ga0307516_10000753 3300031730 Bacteria 44155
62 Ga0307406_10000227 3300031901 Bacteria 34323
63 Ga0307406_10000725 3300031901 Bacteria 18578
64 Ga0307406_10005444 3300031901 Bacteria 6966
65 Ga0307416_100054605 3300032002 Bacteria 3212
66 Ga0373940_0000680 3300035088 Bacteria 5452
67 Ga0373951_0000074 3300035091 Bacteria 39295
68 Ga0373941_0012634 3300035115 Bacteria 2212
69 Ga0373942_0000694 3300035207 Bacteria 9358
70 Ga0395899_0023993 3300037312 Bacteria 4614
71 Ga0395900_0003555 3300037418 Bacteria 16760
72 Ga0395898_0000060 3300037466 Bacteria 273835
73 Ga0395898_0013445 3300037466 Bacteria 8429
74 Ga0395898_0040992 3300037466 Bacteria 4575
75 Ga0439449_0000304 3300042007 Bacteria 17637
76 Ga0439457_000101 3300042014 Bacteria 19989
77 Ga0466969_0004159 3300044656 Bacteria 7684
78 Ga0466972_0005881 3300044658 Bacteria 6152
79 Ga0466965_0000002 3300044683 Bacteria 297957
80 Ga0466961_0032033 3300044693 Bacteria 3378
81 Ga0453684_0107649 3300044712 Bacteria 3394
82 Ga0466970_0000085 3300044765 Bacteria 38719
83 Ga0466960_0004642 3300044901 Bacteria 5388
84 Ga0451576_0000255 3300045051 Bacteria 131310
85 Ga0495627_000900 3300046453 Bacteria 20756
86 Ga0495606_0004623 3300046507 Bacteria 13629
87 Ga0495668_0000898 3300046616 Bacteria 33505
88 Ga0495625_0001829 3300046660 Bacteria 24341
89 Ga0495624_0027879 3300046690 Bacteria 3694
90 Ga0495626_0000273 3300048091 Bacteria 56906
91 Ga0496103_0009826 3300048906 Bacteria 5666
92 Ga0496104_0050707 3300048907 Bacteria 3916
93 Ga0496108_0000149 3300048911 Bacteria 67412
94 Ga0496114_0074250 3300048917 Bacteria 2862
95 Ga0496115_0017212 3300048918 Bacteria 5518
96 Ga0496117_0000668 3300048920 Bacteria 54828
97 Ga0496118_0006226 3300048921 Bacteria 13199
98 Ga0496118_0011110 3300048921 Bacteria 8834
99 Ga0496118_0037871 3300048921 Bacteria 3873
100 Ga0496118_0045443 3300048921 Bacteria 3428
101 Ga0496119_0001534 3300048922 Bacteria 27593
102 Ga0496119_0007590 3300048922 Bacteria 9731
103 Ga0496120_0000356 3300048923 Bacteria 75147
104 Ga0496120_0012295 3300048923 Bacteria 5834
105 Ga0496122_0001212 3300048925 Bacteria 43775
106 Ga0496122_0002225 3300048925 Bacteria 28245
107 Ga0496122_0024400 3300048925 Bacteria 5292
108 Ga0496122_0026719 3300048925 Bacteria 4965
109 Ga0496123_0002049 3300048926 Bacteria 26006
110 Ga0496124_0000548 3300048927 Bacteria 63507
111 Ga0496125_0000192 3300048928 Bacteria 130383
112 Ga0496125_0000224 3300048928 Bacteria 115811
113 Ga0496125_0001039 3300048928 Bacteria 42903
114 Ga0496125_0003267 3300048928 Bacteria 19944
115 Ga0496125_0007262 3300048928 Bacteria 11802
116 Ga0496125_0008200 3300048928 Bacteria 10989
117 Ga0496125_0021503 3300048928 Bacteria 6017
118 Ga0496126_0010772 3300048929 Bacteria 9549
119 Ga0496126_0050444 3300048929 Bacteria 3792
120 Ga0501032_0007176 3300049569 Bacteria 8154
121 Ga0501033_0023729 3300049570 Bacteria 4626
122 Ga0501034_0000939 3300049571 Bacteria 42417
123 Ga0501034_0001613 3300049571 Bacteria 29293
124 Ga0501034_0037111 3300049571 Bacteria 4934
125 Ga0501034_0046537 3300049571 Bacteria 4383
126 Ga0501038_0008113 3300049574 Bacteria 9665
127 Ga0501047_0072587 3300049581 Bacteria 3313
128 Ga0501070_0000034 3300049586 Bacteria 128605
129 Ga0501070_0003717 3300049586 Bacteria 13183
130 Ga0501044_0107109 3300049823 Bacteria 2807
131 nmdc:mga00v17_4714_c1 3300050491 Bacteria 7126
132 nmdc:mga06z11_615_c1 3300050494 Bacteria 12994
133 nmdc:mga05p37_15185_c1 3300050507 Bacteria 9248
134 Ga0500635_0000067 3300053080 Bacteria 69061
135 Ga0500556_0000133 3300053104 Bacteria 63387
136 Ga0500559_0000132 3300053136 Bacteria 57521
137 Ga0500573_0000052 3300053140 Bacteria 94687
138 Ga0500573_0045904 3300053140 Bacteria 2518
139 Ga0501082_0015623 3300060353 Bacteria 6533
140 2644084448 2643221613 Bacteria 4622396
141 2559431705 2558860280 Bacteria 11429938
142 2643734369 2643221542 Bacteria 3563959
143 2643764141 2643221548 Bacteria 8053412
144 2643784087 2643221553 Bacteria 3544260
145 2643849049 2643221566 Bacteria 3460379
146 2643850528 2643221567 Bacteria 4163945
147 2643877024 2643221572 Bacteria 3614809
148 2643902585 2643221578 Bacteria 9213798
149 2643995240 2643221597 Bacteria 3347721
150 2644097936 2643221616 Bacteria 4066575
151 2644110826 2643221619 Bacteria 4158469
152 2644134287 2643221624 Bacteria 4384879
153 2644172485 2643221630 Bacteria 3601215
154 2644266249 2643221647 Bacteria 10741251
155 2644384079 2643221669 Bacteria 3611286
156 2644404906 2643221673 Bacteria 9196637
157 2644461426 2643221682 Bacteria 6743283
158 2644505913 2643221690 Bacteria 4654705
159 2644524261 2643221694 Bacteria 4392972
160 2644631944 2643221714 Bacteria 9015452
161 2644664500 2643221721 Bacteria 4486924
162 2644668361 2643221722 Bacteria 4247614
163 2644678754 2643221724 Bacteria 3593515
164 2730228259 2728369380 Bacteria 3620317
165 2731907636 2731639228 Bacteria 4187555
166 2739605882 2739367654 Bacteria 6049412
167 2747953397 2747842429 Bacteria 3914386
168 2753268928 2751185782 Bacteria 11227053
169 2760306610 2758568522 Bacteria 5953541
170 2774383250 2773857759 Bacteria 2963774
171 2774398714 2773857763 Bacteria 4180068
172 2785369385 2784746768 Bacteria 10036182
173 2808886264 2808606368 Bacteria 3174172
174 2809029139 2808606394 Bacteria 6248540
175 2812363907 2811994880 Bacteria 4147780
176 2819694493 2818991463 Bacteria 7948711
177 2836161911 2836160341 Unclassified 5867367
178 2852648086 2852646457 Bacteria 3408613
179 2852666442 2852663356 Bacteria 4090475
180 2857725671 2857723135 Bacteria 4217853
181 2857733254 2857729791 Bacteria 4040535
182 2862706184 2862705112 Bacteria 6563286
183 2875395746 2875391855 Bacteria 7600475
184 2884766534 2884763398 Bacteria 4091164
185 2884997623 2884994152 Bacteria 4492978
186 2887486169 2887478801 Bacteria 8972725
187 2919525974 2919523602 Bacteria 3788128
188 2928121955 2928121344 Bacteria 3972376
189 2932431217 2932431166 Bacteria 4215299
190 2935891969 2935890801 Bacteria 4593001
191 2945970147 2945968032 Bacteria 4111363
192 2946035325 2946033335 Bacteria 3835514
193 2946042528 2946041624 Bacteria 4191385
194 2946048885 2946045630 Bacteria 8527308
195 2946082592 2946080515 Bacteria 4310960
196 2966600736 2966598605 Bacteria 7676064
197 2977253430 2977251589 Bacteria 2952848
198 2990045046 2990044586 Bacteria 6603797
199 8001786941 8001781756 Bacteria 9586736
200 8004183092 8004182704 Bacteria 3391155
201 8008488111 8008485437 Bacteria 7198341
202 8025527899 8025524527 Bacteria 7197316
203 8045834431 8045830549 Bacteria 4444727
204 8046355246 8046352972 Bacteria 3613806
205 JGI25165J46597_1000055
206 Ga0007423J48922_100414
207 Ga0055539_1000091
208 Ga0055533_1000001
209 Ga0055525_1000289
210 Ga0055527_1000003
211 Ga0055542_1000005
212 Ga0055529_1000006
213 Ga0065714_10009600
214 Ga0070668_100000964
215 Ga0070668_100026317
216 Ga0070710_10000159
217 Ga0068853_100030237
218 Ga0068855_100017604
219 Ga0068856_100059809
220 Ga0068860_100000255
221 Ga0068860_100041311
222 Ga0075364_10006348
223 Ga0075367_10001223
224 Ga0105243_10006417
225 Ga0105239_10147907
226 Ga0105246_10003369
227 Ga0157369_10032220
228 Ga0171462_1004
229 Ga0157372_10055126
230 Ga0209566_100055
231 Ga0209674_100001
232 Ga0209672_100003
233 Ga0209147_100273
234 Ga0209563_100001
235 Ga0209563_100274
236 Ga0207427_100054
237 Ga0209646_1000085
238 Ga0209677_100001
239 Ga0209148_1000004
240 Ga0209233_1000001
241 Ga0209455_1000046
242 Ga0209455_1000867
243 Ga0207692_10002419
244 Ga0207652_10085849
245 Ga0207709_10003818
246 Ga0207668_10000796
247 Ga0207668_10018950
248 Ga0268264_10000649
249 Ga0268264_10015718
250 Ga0265319_1005002
251 Ga0307515_10000598
252 Ga0307515_10015411
253 Ga0307511_10000401
254 Ga0307512_10003328
255 Ga0307512_10013654
256 Ga0265331_10022630
257 Ga0265316_10001833
258 Ga0265316_10011158
259 Ga0307509_10018472
260 Ga0307508_10021323
261 Ga0307508_10035555
262 Ga0265342_10002551
263 Ga0265342_10030892
264 Ga0316576_10037285
265 Ga0307516_10000753
266 Ga0307406_10000227
267 Ga0307406_10000725
268 Ga0307406_10005444
269 Ga0307416_100054605
270 Ga0373940_0000680
271 Ga0373951_0000074
272 Ga0373941_0012634
273 Ga0373942_0000694
274 Ga0395899_0023993
275 Ga0395900_0003555
276 Ga0395898_0000060
277 Ga0395898_0013445
278 Ga0395898_0040992
279 Ga0439449_0000304
280 Ga0439457_000101
281 Ga0466969_0004159
282 Ga0466972_0005881
283 Ga0466965_0000002
284 Ga0466961_0032033
285 Ga0453684_0107649
286 Ga0466970_0000085
287 Ga0466960_0004642
288 Ga0451576_0000255
289 Ga0495627_000900
290 Ga0495606_0004623
291 Ga0495668_0000898
292 Ga0495625_0001829
293 Ga0495624_0027879
294 Ga0495626_0000273
295 Ga0496103_0009826
296 Ga0496104_0050707
297 Ga0496108_0000149
298 Ga0496114_0074250
299 Ga0496115_0017212
300 Ga0496117_0000668
301 Ga0496118_0006226
302 Ga0496118_0011110
303 Ga0496118_0037871
304 Ga0496118_0045443
305 Ga0496119_0001534
306 Ga0496119_0007590
307 Ga0496120_0000356
308 Ga0496120_0012295
309 Ga0496122_0001212
310 Ga0496122_0002225
311 Ga0496122_0024400
312 Ga0496122_0026719
313 Ga0496123_0002049
314 Ga0496124_0000548
315 Ga0496125_0000192
316 Ga0496125_0000224
317 Ga0496125_0001039
318 Ga0496125_0003267
319 Ga0496125_0007262
320 Ga0496125_0008200
321 Ga0496125_0021503
322 Ga0496126_0010772
323 Ga0496126_0050444
324 Ga0501032_0007176
325 Ga0501033_0023729
326 Ga0501034_0000939
327 Ga0501034_0001613
328 Ga0501034_0037111
329 Ga0501034_0046537
330 Ga0501038_0008113
331 Ga0501047_0072587
332 Ga0501070_0000034
333 Ga0501070_0003717
334 Ga0501044_0107109
335 nmdc:mga00v17_4714_c1
336 nmdc:mga06z11_615_c1
337 nmdc:mga05p37_15185_c1
338 Ga0500635_0000067
339 Ga0500556_0000133
340 Ga0500559_0000132
341 Ga0500573_0000052
342 Ga0500573_0045904
343 Ga0501082_0015623
344 2644084448
345 2559431705
346 2643734369
347 2643764141
348 2643784087
349 2643849049
350 2643850528
351 2643877024
352 2643902585
353 2643995240
354 2644097936
355 2644110826
356 2644134287
357 2644172485
358 2644266249
359 2644384079
360 2644404906
361 2644461426
362 2644505913
363 2644524261
364 2644631944
365 2644664500
366 2644668361
367 2644678754
368 2730228259
369 2731907636
370 2739605882
371 2747953397
372 2753268928
373 2760306610
374 2774383250
375 2774398714
376 2785369385
377 2808886264
378 2809029139
379 2812363907
380 2819694493
381 2836161911
382 2852648086
383 2852666442
384 2857725671
385 2857733254
386 2862706184
387 2875395746
388 2884766534
389 2884997623
390 2887486169
391 2919525974
392 2928121955
393 2932431217
394 2935891969
395 2945970147
396 2946035325
397 2946042528
398 2946048885
399 2946082592
400 2966600736
401 2977253430
402 2990045046
403 8001786941
404 8004183092
405 8008488111
406 8025527899
407 8045834431
408 8046355246

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14310

Fn3-like

Fibronectin type III-like domain

715

784

0.99

PF00933

Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

60

365

0.93

PF01915

Glyco_hydro_3_C

Glycosyl hydrolase family 3 C-terminal domain

404

678

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5z9s-assembly1.cif.gz_A functional and structural characterization of a beta-glucosidase involved in saponin metabolism from intestinal bacteria 0.9509 28 756
5z9s-assembly1.cif.gz_A functional and structural characterization of a beta-glucosidase involved in saponin metabolism from intestinal bacteria 0.9166 28 756
4zoa-assembly1.cif.gz_A crystal structure of beta-glucosidase from listeria innocua in complex with isofagomine 0.8882 27 755
3u4a-assembly1.cif.gz_B from soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis 0.8858 24 755
7zgz-assembly1.cif.gz_X crystal structure of beta-xylosidase from thermotoga maritima in complex with methyl-beta-d-xylopyranoside hydrolysed to xylose 0.8849 15 756
ID Description Score Start End Superfamily
5z9sA03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.963 641 756 2.60.40.10
5jp0B03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.957 637 755 2.60.40.10
5yqsB03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9309 641 756 2.60.40.10
5yqsB03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9156 641 756 2.60.40.10
5tf0A03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9098 641 754 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A6B3C8A7-F1-model_v4 Beta-glucosidase 0.9723 533 700 GO:0004553
GO:0005975
AF-A0A4R6KL30-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9719 13 756 GO:0008422
GO:0009251
AF-A0A257KZ48-F1-model_v4 Fibronectin type III-like domain-containing protein 0.9703 385 719 GO:0004553
GO:0005975
AF-A0A086YZL2-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9685 16 756 GO:0008422
GO:0009251
AF-A0A7Y6HKT8-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9678 13 756 GO:0008422
GO:0009251

Map