F313198

General Info

Members Datasets Scaffolds Average Seq Length
204 159 408 324

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2885350715|2885353001
Length 379
Sequence PLVKVCRRHLMAMRGRMAGESAVSWTGNARIHSRGRIRMRSRPYQSPICYFKLGETMPFQDLIQPELGAYVSKVATPGDFAQFWASTIAEARQAGGKVDIVPAQTTLKAVQAFDVTFPGYGGHPIKGWLILPTRHEGRLPLVVQYLGYGGGRGLAHEQLHWAASGFAYFRMDTRGQGSDYSVGETADPVGSTSSFPGFMTRGVLDKNDYYYRRVFTDAVRAIDALLGLDFIDPERIAVCGDSQGGGISLAVGGIDPRIKAVMADVPFLCDFPRALGTAVLDPYLEIVRFLAQHREKKATVFETLGYFDCVNFARQSKAAALFSVALMDEVCPPSTVYGAFNAYGGEKTIVEYEFNNHEGGQGYQEREQMAWLSELFGVG

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
11 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
15 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
16 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
17 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
18 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
24 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
25 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
38 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
39 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
40 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
41 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
42 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
43 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
44 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
48 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
52 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
57 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
58 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
67 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
70 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
71 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
72 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
73 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
74 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
75 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
76 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
77 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
78 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
79 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
80 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
81 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
82 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
98 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
109 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
110 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
111 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
112 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
113 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
114 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
115 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
116 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
117 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
119 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
120 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
121 2643221548 Streptomyces sp. Root55 Isolate Unclassified
122 2643221591 Devosia sp. Root685 Isolate Unclassified
123 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
124 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
125 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
126 2791355260 Rhizobium sp. L9 Isolate Nodule
127 2791355265 Rhizobium sp. H4 Isolate Nodule
128 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
129 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
130 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
131 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
132 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
133 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
134 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
135 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
136 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
137 2885326080 Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 Isolate Nodule
138 2885334103 Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 Isolate Nodule
139 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
140 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
141 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
142 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
143 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
144 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
145 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
146 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
147 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
148 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
149 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
150 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
151 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
152 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
153 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
154 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
155 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
156 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
157 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
158 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
159 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.92
Metatranscriptomes 0.98
Isolates 20.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.9
Nodule 12.75
Rhizoplane 5.39
Rhizosphere 56.86
Stem 0
Stem Tuber 0
Unclassified 0.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10105613 3300003320 Bacteria 1899
2 Ga0055529_1001628 3300003763 Bacteria 5969
3 Ga0070668_100004973 3300005347 Bacteria 9840
4 Ga0070674_100198049 3300005356 Bacteria 1549
5 Ga0070667_100027767 3300005367 Bacteria 4709
6 Ga0070678_100219996 3300005456 Bacteria 1578
7 Ga0070684_100130734 3300005535 Bacteria 2265
8 Ga0070665_100002612 3300005548 Bacteria 19654
9 Ga0068856_100102329 3300005614 Bacteria 2858
10 Ga0068864_100242121 3300005618 Bacteria 1672
11 Ga0068864_100338241 3300005618 Bacteria 1418
12 Ga0068864_100534701 3300005618 Bacteria 1131
13 Ga0068860_100042187 3300005843 Bacteria 4359
14 Ga0081455_10026111 3300005937 Bacteria 5381
15 Ga0081540_1055792 3300005983 Bacteria 1922
16 Ga0075367_10000436 3300006178 Bacteria 15473
17 Ga0075369_10029320 3300006186 Bacteria 2311
18 Ga0068865_100030586 3300006881 Bacteria 3583
19 Ga0123340_1000958 3300009763 Bacteria 22437
20 Ga0123341_1000008 3300009765 Bacteria 134834
21 Ga0105246_10017827 3300011119 Bacteria 4515
22 Ga0157369_10044824 3300013105 Bacteria 4812
23 Ga0157369_10065925 3300013105 Bacteria 3896
24 Ga0157372_10091544 3300013307 Bacteria 3458
25 Ga0163163_10236130 3300014325 Bacteria 1877
26 Ga0157380_10517034 3300014326 Bacteria 1163
27 Ga0163161_10054272 3300017792 Bacteria 2908
28 Ga0206353_10057160 3300020082 Bacteria 7039
29 Ga0209148_1000302 3300025254 Bacteria 70861
30 Ga0209455_1000284 3300025272 Bacteria 54580
31 Ga0207647_10006874 3300025904 Bacteria 8249
32 Ga0207687_10102549 3300025927 Bacteria 2108
33 Ga0207644_10369802 3300025931 Bacteria 1168
34 Ga0207668_10031345 3300025972 Bacteria 3501
35 Ga0207658_10150593 3300025986 Bacteria 1895
36 Ga0207702_10059352 3300026078 Bacteria 3258
37 Ga0207702_10071015 3300026078 Bacteria 2996
38 Ga0207676_10403389 3300026095 Bacteria 1278
39 Ga0207698_10333367 3300026142 Bacteria 1426
40 Ga0268266_10002999 3300028379 Bacteria 17373
41 Ga0265319_1004544 3300028563 Bacteria 6842
42 Ga0265322_10039091 3300028654 Bacteria 1350
43 Ga0307515_10002059 3300028794 Bacteria 44330
44 Ga0265324_10040305 3300029957 Bacteria 1618
45 Ga0307512_10005126 3300030522 Bacteria 13867
46 Ga0307512_10005330 3300030522 Bacteria 13468
47 Ga0265332_10045782 3300031238 Bacteria 1885
48 Ga0265320_10029163 3300031240 Bacteria 2857
49 Ga0307513_10004621 3300031456 Bacteria 18332
50 Ga0307513_10023801 3300031456 Bacteria 7146
51 Ga0307508_10023710 3300031616 Bacteria 5572
52 Ga0265314_10006957 3300031711 Bacteria 9896
53 Ga0265342_10026314 3300031712 Bacteria 3647
54 Ga0307516_10013573 3300031730 Bacteria 8664
55 Ga0307409_100008363 3300031995 Bacteria 6275
56 Ga0307414_10006117 3300032004 Bacteria 6684
57 Ga0307414_10023869 3300032004 Bacteria 3887
58 Ga0307507_10038998 3300033179 Bacteria 4802
59 Ga0373935_0023771 3300035692 Bacteria 3765
60 Ga0395898_0000852 3300037466 Bacteria 50067
61 Ga0395905_0013414 3300037471 Bacteria 7851
62 Ga0395901_0266923 3300038443 Bacteria 1781
63 Ga0451841_0092715 3300041498 Bacteria 1768
64 Ga0439445_0019583 3300042004 Unclassified 1688
65 Ga0466969_0036330 3300044656 Bacteria 2489
66 Ga0466963_0099041 3300044694 Bacteria 1993
67 Ga0453684_0000454 3300044712 Bacteria 165525
68 Ga0453684_0001407 3300044712 Bacteria 69423
69 Ga0453684_0015868 3300044712 Bacteria 11842
70 Ga0466957_0030655 3300044842 Bacteria 3212
71 Ga0451576_0000016 3300045051 Bacteria 565050
72 Ga0466967_0002065 3300045976 Bacteria 12275
73 Ga0466967_0010969 3300045976 Bacteria 6831
74 Ga0495643_0082539 3300046522 Bacteria 1670
75 Ga0495652_0220171 3300046529 Bacteria 1427
76 Ga0495687_044415 3300047443 Bacteria 1932
77 Ga0496104_0104773 3300048907 Bacteria 2710
78 Ga0496104_0177908 3300048907 Bacteria 2037
79 Ga0496105_0012899 3300048908 Bacteria 6624
80 Ga0496107_0119045 3300048910 Bacteria 1945
81 Ga0496109_0032718 3300048912 Bacteria 4676
82 Ga0496109_0094788 3300048912 Bacteria 2763
83 Ga0496109_0144355 3300048912 Bacteria 2226
84 Ga0496110_0026601 3300048913 Bacteria 4953
85 Ga0496111_0009070 3300048914 Bacteria 6622
86 Ga0496113_0098449 3300048916 Bacteria 2264
87 Ga0496114_0302971 3300048917 Bacteria 1411
88 Ga0496117_0000411 3300048920 Bacteria 72032
89 Ga0496118_0004763 3300048921 Bacteria 15871
90 Ga0496119_0000228 3300048922 Bacteria 78785
91 Ga0496120_0000556 3300048923 Bacteria 56898
92 Ga0496120_0061227 3300048923 Bacteria 2102
93 Ga0496122_0000195 3300048925 Bacteria 138274
94 Ga0496122_0000809 3300048925 Bacteria 60004
95 Ga0496122_0000831 3300048925 Bacteria 58597
96 Ga0496122_0006593 3300048925 Bacteria 13251
97 Ga0496123_0000153 3300048926 Bacteria 140053
98 Ga0496123_0000587 3300048926 Bacteria 62043
99 Ga0496123_0000637 3300048926 Bacteria 58599
100 Ga0496123_0001353 3300048926 Bacteria 34559
101 Ga0496124_0000676 3300048927 Bacteria 56040
102 Ga0496125_0000417 3300048928 Bacteria 79282
103 Ga0496125_0000680 3300048928 Bacteria 56712
104 Ga0496125_0002166 3300048928 Bacteria 26276
105 Ga0496125_0044706 3300048928 Bacteria 3739
106 Ga0496126_0000343 3300048929 Bacteria 97986
107 Ga0496126_0000815 3300048929 Bacteria 55703
108 Ga0501031_0013554 3300049568 Bacteria 5312
109 Ga0501031_0072793 3300049568 Bacteria 2237
110 Ga0501032_0004850 3300049569 Bacteria 10080
111 Ga0501032_0007251 3300049569 Bacteria 8109
112 Ga0501032_0038396 3300049569 Bacteria 3261
113 Ga0501034_0014330 3300049571 Bacteria 8170
114 Ga0501034_0015280 3300049571 Bacteria 7890
115 Ga0501034_0318530 3300049571 Bacteria 1488
116 Ga0501036_0006172 3300049572 Bacteria 9727
117 Ga0501036_0015632 3300049572 Bacteria 6339
118 Ga0501037_0031162 3300049573 Bacteria 3937
119 Ga0501037_0073264 3300049573 Bacteria 2490
120 Ga0501037_0107010 3300049573 Bacteria 2015
121 Ga0501038_0006030 3300049574 Bacteria 11217
122 Ga0501038_0128877 3300049574 Bacteria 2079
123 Ga0501038_0207955 3300049574 Bacteria 1567
124 Ga0501038_0230190 3300049574 Bacteria 1475
125 Ga0501039_0211681 3300049575 Bacteria 1524
126 Ga0501041_0001872 3300049577 Bacteria 11784
127 Ga0501042_0491347 3300049578 Bacteria 891
128 Ga0501043_0014917 3300049579 Bacteria 6083
129 Ga0501043_0033014 3300049579 Bacteria 4070
130 Ga0501043_0043644 3300049579 Bacteria 3524
131 Ga0501046_0010003 3300049580 Bacteria 8169
132 Ga0501046_0173439 3300049580 Bacteria 1617
133 Ga0501047_0011041 3300049581 Bacteria 8546
134 Ga0501047_0017431 3300049581 Bacteria 6877
135 Ga0501047_0083036 3300049581 Bacteria 3079
136 Ga0501048_0000702 3300049582 Bacteria 24393
137 Ga0501067_0006815 3300049583 Bacteria 6335
138 Ga0501068_0003736 3300049584 Bacteria 8233
139 Ga0501070_0122135 3300049586 Bacteria 2152
140 Ga0501072_0003309 3300049588 Bacteria 12118
141 Ga0501074_0022597 3300049590 Bacteria 4571
142 Ga0501076_0009282 3300049592 Bacteria 7257
143 Ga0501079_0002896 3300049741 Bacteria 12539
144 Ga0501080_0032190 3300049742 Bacteria 4888
145 Ga0501083_0008091 3300049744 Bacteria 7435
146 Ga0501035_0016210 3300049822 Bacteria 6877
147 Ga0501035_0096677 3300049822 Bacteria 2594
148 Ga0501044_0007382 3300049823 Bacteria 12088
149 Ga0501044_0015670 3300049823 Bacteria 8163
150 Ga0501044_0045888 3300049823 Bacteria 4526
151 Ga0501044_0115621 3300049823 Bacteria 2688
152 Ga0501044_0174353 3300049823 Bacteria 2120
153 Ga0501045_0183290 3300049824 Bacteria 1560
154 nmdc:mga0sz30_23115_c1 3300050516 Bacteria 2526
155 Ga0495612_0006873 3300053078 Bacteria 4655
156 Ga0495619_0200308 3300053085 Bacteria 1382
157 Ga0500641_0144559 3300053096 Bacteria 1027
158 Ga0500658_0113749 3300053134 Bacteria 1194
159 Ga0500573_0000031 3300053140 Bacteria 134098
160 Ga0500616_0006165 3300053153 Bacteria 7925
161 Ga0501084_0011648 3300054114 Bacteria 7280
162 Ga0587072_010724 3300059643 Bacteria 1485
163 Ga0530510_0148972 3300061734 Bacteria 1727
164 2885353001 2885350715 Bacteria 6787678
165 2616900914 2616644941 Bacteria 8510691
166 2643761880 2643221548 Bacteria 8053412
167 2643964752 2643221591 Bacteria 4397626
168 2644460693 2643221682 Bacteria 6743283
169 2753265903 2751185782 Bacteria 11227053
170 2793316615 2791355259 Bacteria 7254731
171 2793323168 2791355260 Bacteria 6598818
172 2793356459 2791355265 Bacteria 6539969
173 2812477320 2811994917 Bacteria 7761064
174 2857736129 2857733635 Bacteria 3532004
175 2871491394 2871488783 Bacteria 6929816
176 2876398231 2876392853 Bacteria 6660880
177 2878759507 2878753008 Bacteria 6922523
178 2881167234 2881161766 Bacteria 7127907
179 2881863042 2881861095 Bacteria 7128710
180 2882913076 2882912400 Bacteria 6801539
181 2884698123 2884693830 Bacteria 11273186
182 2885328674 2885326080 Bacteria 7134805
183 2885338817 2885334103 Bacteria 7216818
184 2895428361 2895427314 Bacteria 13147766
185 2895445183 2895442618 Bacteria 11027144
186 2903494541 2903492973 Bacteria 13473544
187 2904664786 2904659560 Bacteria 6685615
188 2924786133 2924784321 Bacteria 7416538
189 2935893638 2935890801 Bacteria 4593001
190 2946042356 2946041624 Bacteria 4191385
191 2961119785 2961114664 Bacteria 6680456
192 2961170987 2961170736 Bacteria 7072258
193 2968010282 2968003550 Bacteria 6929263
194 2968116142 2968110612 Bacteria 6814636
195 2970503581 2970503327 Bacteria 7099517
196 2970527912 2970524798 Bacteria 6840927
197 2977828030 2977821940 Bacteria 6906439
198 2979808217 2979808191 Bacteria 7179355
199 3000137281 3000135777 Bacteria 6891109
200 637078863 637000159 Bacteria 7596297
201 8004381010 8004374579 Bacteria 6898112
202 8005250371 8005246636 Bacteria 4933972
203 8033691477 8033684223 Bacteria 6906479
204 8046354035 8046352972 Bacteria 3613806
205 rootH2_10105613
206 Ga0055529_1001628
207 Ga0070668_100004973
208 Ga0070674_100198049
209 Ga0070667_100027767
210 Ga0070678_100219996
211 Ga0070684_100130734
212 Ga0070665_100002612
213 Ga0068856_100102329
214 Ga0068864_100242121
215 Ga0068864_100338241
216 Ga0068864_100534701
217 Ga0068860_100042187
218 Ga0081455_10026111
219 Ga0081540_1055792
220 Ga0075367_10000436
221 Ga0075369_10029320
222 Ga0068865_100030586
223 Ga0123340_1000958
224 Ga0123341_1000008
225 Ga0105246_10017827
226 Ga0157369_10044824
227 Ga0157369_10065925
228 Ga0157372_10091544
229 Ga0163163_10236130
230 Ga0157380_10517034
231 Ga0163161_10054272
232 Ga0206353_10057160
233 Ga0209148_1000302
234 Ga0209455_1000284
235 Ga0207647_10006874
236 Ga0207687_10102549
237 Ga0207644_10369802
238 Ga0207668_10031345
239 Ga0207658_10150593
240 Ga0207702_10059352
241 Ga0207702_10071015
242 Ga0207676_10403389
243 Ga0207698_10333367
244 Ga0268266_10002999
245 Ga0265319_1004544
246 Ga0265322_10039091
247 Ga0307515_10002059
248 Ga0265324_10040305
249 Ga0307512_10005126
250 Ga0307512_10005330
251 Ga0265332_10045782
252 Ga0265320_10029163
253 Ga0307513_10004621
254 Ga0307513_10023801
255 Ga0307508_10023710
256 Ga0265314_10006957
257 Ga0265342_10026314
258 Ga0307516_10013573
259 Ga0307409_100008363
260 Ga0307414_10006117
261 Ga0307414_10023869
262 Ga0307507_10038998
263 Ga0373935_0023771
264 Ga0395898_0000852
265 Ga0395905_0013414
266 Ga0395901_0266923
267 Ga0451841_0092715
268 Ga0439445_0019583
269 Ga0466969_0036330
270 Ga0466963_0099041
271 Ga0453684_0000454
272 Ga0453684_0001407
273 Ga0453684_0015868
274 Ga0466957_0030655
275 Ga0451576_0000016
276 Ga0466967_0002065
277 Ga0466967_0010969
278 Ga0495643_0082539
279 Ga0495652_0220171
280 Ga0495687_044415
281 Ga0496104_0104773
282 Ga0496104_0177908
283 Ga0496105_0012899
284 Ga0496107_0119045
285 Ga0496109_0032718
286 Ga0496109_0094788
287 Ga0496109_0144355
288 Ga0496110_0026601
289 Ga0496111_0009070
290 Ga0496113_0098449
291 Ga0496114_0302971
292 Ga0496117_0000411
293 Ga0496118_0004763
294 Ga0496119_0000228
295 Ga0496120_0000556
296 Ga0496120_0061227
297 Ga0496122_0000195
298 Ga0496122_0000809
299 Ga0496122_0000831
300 Ga0496122_0006593
301 Ga0496123_0000153
302 Ga0496123_0000587
303 Ga0496123_0000637
304 Ga0496123_0001353
305 Ga0496124_0000676
306 Ga0496125_0000417
307 Ga0496125_0000680
308 Ga0496125_0002166
309 Ga0496125_0044706
310 Ga0496126_0000343
311 Ga0496126_0000815
312 Ga0501031_0013554
313 Ga0501031_0072793
314 Ga0501032_0004850
315 Ga0501032_0007251
316 Ga0501032_0038396
317 Ga0501034_0014330
318 Ga0501034_0015280
319 Ga0501034_0318530
320 Ga0501036_0006172
321 Ga0501036_0015632
322 Ga0501037_0031162
323 Ga0501037_0073264
324 Ga0501037_0107010
325 Ga0501038_0006030
326 Ga0501038_0128877
327 Ga0501038_0207955
328 Ga0501038_0230190
329 Ga0501039_0211681
330 Ga0501041_0001872
331 Ga0501042_0491347
332 Ga0501043_0014917
333 Ga0501043_0033014
334 Ga0501043_0043644
335 Ga0501046_0010003
336 Ga0501046_0173439
337 Ga0501047_0011041
338 Ga0501047_0017431
339 Ga0501047_0083036
340 Ga0501048_0000702
341 Ga0501067_0006815
342 Ga0501068_0003736
343 Ga0501070_0122135
344 Ga0501072_0003309
345 Ga0501074_0022597
346 Ga0501076_0009282
347 Ga0501079_0002896
348 Ga0501080_0032190
349 Ga0501083_0008091
350 Ga0501035_0016210
351 Ga0501035_0096677
352 Ga0501044_0007382
353 Ga0501044_0015670
354 Ga0501044_0045888
355 Ga0501044_0115621
356 Ga0501044_0174353
357 Ga0501045_0183290
358 nmdc:mga0sz30_23115_c1
359 Ga0495612_0006873
360 Ga0495619_0200308
361 Ga0500641_0144559
362 Ga0500658_0113749
363 Ga0500573_0000031
364 Ga0500616_0006165
365 Ga0501084_0011648
366 Ga0587072_010724
367 Ga0530510_0148972
368 2885353001
369 2616900914
370 2643761880
371 2643964752
372 2644460693
373 2753265903
374 2793316615
375 2793323168
376 2793356459
377 2812477320
378 2857736129
379 2871491394
380 2876398231
381 2878759507
382 2881167234
383 2881863042
384 2882913076
385 2884698123
386 2885328674
387 2885338817
388 2895428361
389 2895445183
390 2903494541
391 2904664786
392 2924786133
393 2935893638
394 2946042356
395 2961119785
396 2961170987
397 2968010282
398 2968116142
399 2970503581
400 2970527912
401 2977828030
402 2979808217
403 3000137281
404 637078863
405 8004381010
406 8005250371
407 8033691477
408 8046354035

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05448

AXE1

Acetyl xylan esterase (AXE1)

57

375

0.96

PF00326

Peptidase_S9

Prolyl oligopeptidase family

197

378

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hfn-assembly1.cif.gz_A crystal structure of a loop truncation variant of thermotoga maritima acetyl esterase tm0077 (apo structure) at 2.75 angstrom resolution 0.9837 2 321
5hfn-assembly1.cif.gz_E crystal structure of a loop truncation variant of thermotoga maritima acetyl esterase tm0077 (apo structure) at 2.75 angstrom resolution 0.9798 2 321
5hfn-assembly1.cif.gz_F crystal structure of a loop truncation variant of thermotoga maritima acetyl esterase tm0077 (apo structure) at 2.75 angstrom resolution 0.9763 5 321
5hfn-assembly1.cif.gz_A crystal structure of a loop truncation variant of thermotoga maritima acetyl esterase tm0077 (apo structure) at 2.75 angstrom resolution 0.9733 2 321
5hfn-assembly1.cif.gz_B crystal structure of a loop truncation variant of thermotoga maritima acetyl esterase tm0077 (apo structure) at 2.75 angstrom resolution 0.9715 5 321
ID Description Score Start End Superfamily
5hfnF00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9763 5 321 3.40.50.1820
5hfnF00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9625 5 321 3.40.50.1820
3m83C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9556 1 321 3.40.50.1820
3m83C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9468 1 321 3.40.50.1820
6agqE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9264 6 320 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A852ZSA5-F1-model_v4 Cephalosporin-C deacetylase-like acetyl esterase 0.9976 211 322 GO:0005976
GO:0052689
AF-A0A251XMR5-F1-model_v4 Cephalosporin-C deacetylase 0.9954 176 321 GO:0005976
GO:0052689
AF-A0A2N2LPF7-F1-model_v4 Acetylxylan esterase 0.9926 191 321 GO:0005976
GO:0052689
AF-T1W8H1-F1-model_v4 deleted 0.9866 151 321
AF-A0A6F8YZK7-F1-model_v4 Acetyl xylan esterase domain-containing protein 0.9854 171 321 GO:0005976
GO:0052689

Map