F313632

General Info

Members Datasets Scaffolds Average Seq Length
205 124 410 525

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10001335|Ga0081538_100013355
Length 531
Sequence VSRIAIYDCTLRDGMQGEGMSLSAAEKVRVAHVLDELGVPFVEAGFPASNPKEAELFELLAGEKFRTAEIAAFGMTRRRGVAASDDEALRLLAELFTPVCTLVGKTWSLHLDKVVRVDREENLRMISESVGFLAGEGKTVVYDAEHFFDAWRDDREYALRCAHAAADAGAEWVTLCDTNGATLPHEVAAATEEVVRAIGRRVAIHCHNDAECGVANSLAAVQAGARMVQGTMNGYGERCGNANLVSIVPNLQLKMGHECLPELTGLTEASHFLDELLNFVPDPNRPYVGANAFAHKGGMHVAGVATDPATFEHIDPAAVGNSREVLISELSGKGTVLQRAEATGVDLDPVTAARVVERVKQLEHEGFHFEAADGSFDLLIRRETGEYQPLFRLESWRVIAEQREDGKVQTEATIKIWVDGERYVRTAEGNGPVHALDVALRSAISATYPHLADIRLVNYKVRILDEEKATGAVTRVLLDASDGTDTWGSIGVSENVIEASWDALVDSLEAGMLPGRVHHRRAAGPTAAPAP

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
66 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
71 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
78 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
79 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
80 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
97 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
98 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
99 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
100 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
104 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
105 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
106 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
107 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
121 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
124 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.51
Metatranscriptomes 0.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.98
Nodule 0
Rhizoplane 10.73
Rhizosphere 75.61
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10001335 3300005981 Bacteria 25371
2 Ga0070683_100029786 3300005329 Bacteria 4946
3 Ga0070682_100000030 3300005337 Bacteria 182768
4 Ga0070682_100021609 3300005337 Bacteria 3801
5 Ga0068868_100015442 3300005338 Bacteria 5648
6 Ga0070661_100037748 3300005344 Bacteria 3515
7 Ga0070673_100003827 3300005364 Bacteria 9441
8 Ga0070659_100015874 3300005366 Bacteria 5647
9 Ga0070659_100034066 3300005366 Bacteria 3960
10 Ga0070709_10077214 3300005434 Bacteria 2164
11 Ga0070714_100000347 3300005435 Bacteria 34714
12 Ga0070714_100022213 3300005435 Bacteria 5201
13 Ga0070714_100124820 3300005435 Bacteria 2294
14 Ga0070713_100103294 3300005436 Bacteria 2473
15 Ga0070713_100113392 3300005436 Bacteria 2367
16 Ga0070710_10000015 3300005437 Bacteria 103891
17 Ga0070710_10004904 3300005437 Bacteria 6330
18 Ga0070663_100001585 3300005455 Bacteria 12522
19 Ga0070663_100056717 3300005455 Bacteria 2808
20 Ga0070663_100134585 3300005455 Bacteria 1881
21 Ga0070662_100000006 3300005457 Bacteria 169366
22 Ga0068867_100022345 3300005459 Bacteria 4523
23 Ga0070684_100037699 3300005535 Bacteria 4148
24 Ga0070684_100050816 3300005535 Bacteria 3601
25 Ga0068853_100031030 3300005539 Bacteria 4518
26 Ga0070665_100000040 3300005548 Bacteria 305480
27 Ga0070664_100028746 3300005564 Bacteria 4628
28 Ga0068854_100031314 3300005578 Bacteria 3696
29 Ga0068852_100009719 3300005616 Bacteria 7146
30 Ga0068852_100107382 3300005616 Bacteria 2532
31 Ga0068851_10018177 3300005834 Bacteria 3386
32 Ga0068863_100005037 3300005841 Bacteria 13029
33 Ga0068858_100000075 3300005842 Bacteria 104349
34 Ga0068858_100001009 3300005842 Bacteria 29022
35 Ga0068858_100021822 3300005842 Bacteria 5980
36 Ga0070717_10000059 3300006028 Bacteria 92958
37 Ga0070717_10134464 3300006028 Bacteria 2128
38 Ga0075363_100009879 3300006048 Bacteria 4504
39 Ga0070712_100000050 3300006175 Bacteria 63870
40 Ga0068865_100000293 3300006881 Bacteria 27538
41 Ga0105245_10007690 3300009098 Bacteria 9441
42 Ga0105245_10119977 3300009098 Bacteria 2455
43 Ga0105243_10071039 3300009148 Bacteria 2813
44 Ga0105237_10023751 3300009545 Bacteria 6276
45 Ga0105238_10000048 3300009551 Bacteria 146322
46 Ga0105238_10081217 3300009551 Bacteria 3231
47 Ga0105238_10207899 3300009551 Bacteria 1933
48 Ga0105246_10041695 3300011119 Bacteria 3104
49 Ga0157375_10000130 3300013308 Bacteria 74968
50 Ga0157375_10214929 3300013308 Bacteria 2080
51 Ga0157380_10047790 3300014326 Bacteria 3367
52 Ga0206353_10045897 3300020082 Bacteria 3384
53 Ga0213874_10000437 3300021377 Bacteria 8339
54 Ga0213874_10003235 3300021377 Bacteria 3591
55 Ga0213876_10001996 3300021384 Bacteria 12206
56 Ga0213876_10009416 3300021384 Bacteria 5258
57 Ga0213876_10054205 3300021384 Bacteria 2117
58 Ga0213875_10002140 3300021388 Bacteria 12057
59 Ga0213875_10004102 3300021388 Bacteria 8091
60 Ga0213875_10007667 3300021388 Bacteria 5561
61 Ga0207656_10023403 3300025321 Bacteria 2487
62 Ga0207692_10000013 3300025898 Bacteria 103819
63 Ga0207693_10000151 3300025915 Bacteria 64033
64 Ga0207693_10000318 3300025915 Bacteria 44789
65 Ga0207663_10108296 3300025916 Bacteria 1881
66 Ga0207657_10008233 3300025919 Bacteria 10612
67 Ga0207681_10011318 3300025923 Bacteria 5480
68 Ga0207694_10000056 3300025924 Bacteria 146908
69 Ga0207687_10002221 3300025927 Bacteria 13236
70 Ga0207687_10018016 3300025927 Bacteria 4659
71 Ga0207700_10089231 3300025928 Bacteria 2430
72 Ga0207700_10139429 3300025928 Bacteria 1991
73 Ga0207664_10000310 3300025929 Bacteria 36142
74 Ga0207664_10008500 3300025929 Bacteria 7166
75 Ga0207664_10109681 3300025929 Bacteria 2293
76 Ga0207664_10151476 3300025929 Bacteria 1970
77 Ga0207706_10000017 3300025933 Bacteria 169589
78 Ga0207706_10005571 3300025933 Bacteria 11737
79 Ga0207709_10030969 3300025935 Bacteria 3118
80 Ga0207704_10000103 3300025938 Bacteria 47628
81 Ga0207661_10002534 3300025944 Bacteria 12567
82 Ga0207679_10089803 3300025945 Bacteria 2373
83 Ga0207651_10000406 3300025960 Bacteria 18224
84 Ga0207640_10011740 3300025981 Bacteria 4968
85 Ga0207677_10008154 3300026023 Bacteria 5833
86 Ga0207677_10035007 3300026023 Bacteria 3257
87 Ga0207677_10056781 3300026023 Bacteria 2684
88 Ga0207703_10000088 3300026035 Bacteria 106080
89 Ga0207703_10000166 3300026035 Bacteria 76553
90 Ga0207703_10017583 3300026035 Bacteria 5582
91 Ga0207639_10010498 3300026041 Bacteria 6415
92 Ga0207678_10009169 3300026067 Bacteria 8708
93 Ga0207678_10095820 3300026067 Bacteria 2536
94 Ga0207708_10021664 3300026075 Bacteria 4848
95 Ga0207641_10000077 3300026088 Bacteria 144978
96 Ga0207648_10008476 3300026089 Bacteria 9950
97 Ga0207648_10012022 3300026089 Bacteria 8120
98 Ga0207675_100076465 3300026118 Bacteria 3135
99 Ga0268266_10000045 3300028379 Bacteria 312955
100 Ga0265326_10000023 3300028558 Bacteria 113142
101 Ga0265319_1004953 3300028563 Bacteria 6490
102 Ga0265334_10000135 3300028573 Bacteria 46602
103 Ga0265336_10005603 3300028666 Bacteria 4615
104 Ga0265338_10000902 3300028800 Bacteria 49948
105 Ga0265324_10001427 3300029957 Bacteria 13711
106 Ga0307511_10046799 3300030521 Bacteria 3551
107 Ga0265316_10000653 3300031344 Bacteria 38528
108 Ga0395900_0007841 3300037418 Bacteria 11006
109 Ga0395898_0025451 3300037466 Bacteria 5963
110 Ga0436364_0526020 3300037853 Bacteria 4736
111 Ga0436364_0540788 3300037853 Bacteria 11196
112 Ga0436364_0605360 3300037853 Bacteria 16128
113 Ga0436364_0715330 3300037853 Bacteria 5510
114 Ga0436365_0002079 3300039437 Bacteria 8325
115 Ga0436365_0469566 3300039437 Bacteria 5529
116 Ga0436365_0666274 3300039437 Bacteria 19604
117 Ga0436365_0713645 3300039437 Bacteria 10270
118 Ga0436365_1022963 3300039437 Bacteria 2254
119 Ga0436365_1071562 3300039437 Bacteria 5677
120 Ga0436365_1129924 3300039437 Bacteria 4306
121 Ga0436365_1636267 3300039437 Bacteria 24373
122 Ga0436363_0049800 3300039450 Bacteria 25654
123 Ga0436363_0199163 3300039450 Bacteria 1925
124 Ga0436363_1015413 3300039450 Bacteria 8480
125 Ga0436363_1539684 3300039450 Bacteria 2413
126 Ga0436362_0385567 3300039453 Bacteria 5044
127 Ga0436362_1245627 3300039453 Bacteria 2446
128 Ga0451853_2358100 3300041512 Bacteria 3697
129 Ga0466966_0034914 3300044684 Bacteria 3251
130 Ga0466966_0052274 3300044684 Bacteria 2596
131 Ga0466966_0076695 3300044684 Bacteria 2087
132 Ga0466961_0003770 3300044693 Bacteria 9476
133 Ga0466961_0100640 3300044693 Bacteria 1821
134 Ga0466963_0002714 3300044694 Bacteria 9977
135 Ga0466963_0177516 3300044694 Bacteria 1486
136 Ga0466971_0005585 3300044719 Bacteria 5466
137 Ga0466957_0003140 3300044842 Bacteria 9001
138 Ga0466959_0020851 3300045049 Bacteria 4829
139 Ga0466959_0086915 3300045049 Bacteria 2249
140 Ga0466959_0088227 3300045049 Bacteria 2230
141 Ga0466959_0103374 3300045049 Bacteria 2038
142 Ga0466959_0106253 3300045049 Bacteria 2007
143 Ga0466958_0006716 3300045836 Bacteria 6280
144 Ga0466958_0009802 3300045836 Bacteria 5346
145 Ga0466958_0026351 3300045836 Bacteria 3435
146 Ga0466958_0035834 3300045836 Bacteria 2966
147 Ga0466958_0040797 3300045836 Bacteria 2790
148 Ga0466958_0089385 3300045836 Bacteria 1904
149 Ga0466958_0150299 3300045836 Bacteria 1469
150 Ga0466967_0003227 3300045976 Bacteria 10544
151 Ga0466967_0057508 3300045976 Bacteria 3434
152 Ga0466967_0144025 3300045976 Bacteria 2222
153 Ga0495641_0000027 3300046461 Bacteria 100420
154 Ga0495651_0094656 3300046462 Bacteria 2235
155 Ga0495653_0020916 3300046463 Bacteria 5301
156 Ga0495653_0086737 3300046463 Bacteria 2300
157 Ga0495582_0000001 3300046473 Bacteria 252434
158 Ga0495608_0016030 3300046511 Bacteria 5187
159 Ga0495608_0060274 3300046511 Bacteria 2497
160 Ga0495620_0002209 3300046515 Bacteria 11297
161 Ga0495628_0087191 3300046516 Bacteria 2420
162 Ga0495652_0000023 3300046529 Bacteria 168049
163 Ga0495652_0012673 3300046529 Bacteria 7595
164 Ga0495640_0042643 3300046533 Bacteria 3164
165 Ga0495586_0001297 3300046535 Bacteria 13932
166 Ga0495587_0052263 3300046536 Bacteria 2411
167 Ga0495656_0005912 3300046615 Bacteria 4257
168 Ga0495634_0000028 3300046642 Bacteria 114075
169 Ga0495635_0000005 3300046663 Bacteria 302178
170 Ga0495658_0000193 3300046683 Bacteria 35142
171 Ga0495676_0008708 3300047321 Bacteria 9290
172 Ga0495680_0000193 3300047322 Bacteria 65567
173 Ga0495675_0016728 3300047444 Bacteria 4638
174 Ga0495679_032661 3300047446 Bacteria 1667
175 Ga0495684_0018084 3300047471 Bacteria 5432
176 Ga0495602_0080533 3300048088 Bacteria 2743
177 Ga0496100_0001292 3300048903 Bacteria 12221
178 Ga0496101_0001720 3300048904 Bacteria 13114
179 Ga0496101_0081054 3300048904 Bacteria 2399
180 Ga0496104_0008681 3300048907 Bacteria 9037
181 Ga0496104_0114950 3300048907 Bacteria 2582
182 Ga0496105_0000098 3300048908 Bacteria 59301
183 Ga0496106_0005859 3300048909 Bacteria 9089
184 Ga0496106_0018555 3300048909 Bacteria 5147
185 Ga0496107_0050189 3300048910 Bacteria 3007
186 Ga0496108_0000355 3300048911 Bacteria 38685
187 Ga0496108_0003065 3300048911 Bacteria 13430
188 Ga0496108_0100635 3300048911 Bacteria 2465
189 Ga0496109_0000400 3300048912 Bacteria 39194
190 Ga0496109_0000903 3300048912 Bacteria 24701
191 Ga0496109_0001433 3300048912 Bacteria 19779
192 Ga0496109_0001543 3300048912 Bacteria 19146
193 Ga0496109_0006094 3300048912 Bacteria 10128
194 Ga0496110_0078901 3300048913 Bacteria 2931
195 Ga0496112_0002699 3300048915 Bacteria 14349
196 Ga0496112_0002848 3300048915 Bacteria 14052
197 Ga0496114_0005568 3300048917 Bacteria 9872
198 Ga0496114_0024574 3300048917 Bacteria 4920
199 Ga0495612_0000489 3300053078 Bacteria 15785
200 Ga0495612_0005617 3300053078 Bacteria 5182
201 Ga0495595_0007467 3300053084 Bacteria 4477
202 Ga0495619_0000008 3300053085 Bacteria 305999
203 Ga0495619_0020690 3300053085 Bacteria 4194
204 Ga0500614_000399 3300053123 Bacteria 11293
205 Ga0466962_0033307 3300061719 Bacteria 2465
206 Ga0081538_10001335
207 Ga0070683_100029786
208 Ga0070682_100000030
209 Ga0070682_100021609
210 Ga0068868_100015442
211 Ga0070661_100037748
212 Ga0070673_100003827
213 Ga0070659_100015874
214 Ga0070659_100034066
215 Ga0070709_10077214
216 Ga0070714_100000347
217 Ga0070714_100022213
218 Ga0070714_100124820
219 Ga0070713_100103294
220 Ga0070713_100113392
221 Ga0070710_10000015
222 Ga0070710_10004904
223 Ga0070663_100001585
224 Ga0070663_100056717
225 Ga0070663_100134585
226 Ga0070662_100000006
227 Ga0068867_100022345
228 Ga0070684_100037699
229 Ga0070684_100050816
230 Ga0068853_100031030
231 Ga0070665_100000040
232 Ga0070664_100028746
233 Ga0068854_100031314
234 Ga0068852_100009719
235 Ga0068852_100107382
236 Ga0068851_10018177
237 Ga0068863_100005037
238 Ga0068858_100000075
239 Ga0068858_100001009
240 Ga0068858_100021822
241 Ga0070717_10000059
242 Ga0070717_10134464
243 Ga0075363_100009879
244 Ga0070712_100000050
245 Ga0068865_100000293
246 Ga0105245_10007690
247 Ga0105245_10119977
248 Ga0105243_10071039
249 Ga0105237_10023751
250 Ga0105238_10000048
251 Ga0105238_10081217
252 Ga0105238_10207899
253 Ga0105246_10041695
254 Ga0157375_10000130
255 Ga0157375_10214929
256 Ga0157380_10047790
257 Ga0206353_10045897
258 Ga0213874_10000437
259 Ga0213874_10003235
260 Ga0213876_10001996
261 Ga0213876_10009416
262 Ga0213876_10054205
263 Ga0213875_10002140
264 Ga0213875_10004102
265 Ga0213875_10007667
266 Ga0207656_10023403
267 Ga0207692_10000013
268 Ga0207693_10000151
269 Ga0207693_10000318
270 Ga0207663_10108296
271 Ga0207657_10008233
272 Ga0207681_10011318
273 Ga0207694_10000056
274 Ga0207687_10002221
275 Ga0207687_10018016
276 Ga0207700_10089231
277 Ga0207700_10139429
278 Ga0207664_10000310
279 Ga0207664_10008500
280 Ga0207664_10109681
281 Ga0207664_10151476
282 Ga0207706_10000017
283 Ga0207706_10005571
284 Ga0207709_10030969
285 Ga0207704_10000103
286 Ga0207661_10002534
287 Ga0207679_10089803
288 Ga0207651_10000406
289 Ga0207640_10011740
290 Ga0207677_10008154
291 Ga0207677_10035007
292 Ga0207677_10056781
293 Ga0207703_10000088
294 Ga0207703_10000166
295 Ga0207703_10017583
296 Ga0207639_10010498
297 Ga0207678_10009169
298 Ga0207678_10095820
299 Ga0207708_10021664
300 Ga0207641_10000077
301 Ga0207648_10008476
302 Ga0207648_10012022
303 Ga0207675_100076465
304 Ga0268266_10000045
305 Ga0265326_10000023
306 Ga0265319_1004953
307 Ga0265334_10000135
308 Ga0265336_10005603
309 Ga0265338_10000902
310 Ga0265324_10001427
311 Ga0307511_10046799
312 Ga0265316_10000653
313 Ga0395900_0007841
314 Ga0395898_0025451
315 Ga0436364_0526020
316 Ga0436364_0540788
317 Ga0436364_0605360
318 Ga0436364_0715330
319 Ga0436365_0002079
320 Ga0436365_0469566
321 Ga0436365_0666274
322 Ga0436365_0713645
323 Ga0436365_1022963
324 Ga0436365_1071562
325 Ga0436365_1129924
326 Ga0436365_1636267
327 Ga0436363_0049800
328 Ga0436363_0199163
329 Ga0436363_1015413
330 Ga0436363_1539684
331 Ga0436362_0385567
332 Ga0436362_1245627
333 Ga0451853_2358100
334 Ga0466966_0034914
335 Ga0466966_0052274
336 Ga0466966_0076695
337 Ga0466961_0003770
338 Ga0466961_0100640
339 Ga0466963_0002714
340 Ga0466963_0177516
341 Ga0466971_0005585
342 Ga0466957_0003140
343 Ga0466959_0020851
344 Ga0466959_0086915
345 Ga0466959_0088227
346 Ga0466959_0103374
347 Ga0466959_0106253
348 Ga0466958_0006716
349 Ga0466958_0009802
350 Ga0466958_0026351
351 Ga0466958_0035834
352 Ga0466958_0040797
353 Ga0466958_0089385
354 Ga0466958_0150299
355 Ga0466967_0003227
356 Ga0466967_0057508
357 Ga0466967_0144025
358 Ga0495641_0000027
359 Ga0495651_0094656
360 Ga0495653_0020916
361 Ga0495653_0086737
362 Ga0495582_0000001
363 Ga0495608_0016030
364 Ga0495608_0060274
365 Ga0495620_0002209
366 Ga0495628_0087191
367 Ga0495652_0000023
368 Ga0495652_0012673
369 Ga0495640_0042643
370 Ga0495586_0001297
371 Ga0495587_0052263
372 Ga0495656_0005912
373 Ga0495634_0000028
374 Ga0495635_0000005
375 Ga0495658_0000193
376 Ga0495676_0008708
377 Ga0495680_0000193
378 Ga0495675_0016728
379 Ga0495679_032661
380 Ga0495684_0018084
381 Ga0495602_0080533
382 Ga0496100_0001292
383 Ga0496101_0001720
384 Ga0496101_0081054
385 Ga0496104_0008681
386 Ga0496104_0114950
387 Ga0496105_0000098
388 Ga0496106_0005859
389 Ga0496106_0018555
390 Ga0496107_0050189
391 Ga0496108_0000355
392 Ga0496108_0003065
393 Ga0496108_0100635
394 Ga0496109_0000400
395 Ga0496109_0000903
396 Ga0496109_0001433
397 Ga0496109_0001543
398 Ga0496109_0006094
399 Ga0496110_0078901
400 Ga0496112_0002699
401 Ga0496112_0002848
402 Ga0496114_0005568
403 Ga0496114_0024574
404 Ga0495612_0000489
405 Ga0495612_0005617
406 Ga0495595_0007467
407 Ga0495619_0000008
408 Ga0495619_0020690
409 Ga0500614_000399
410 Ga0466962_0033307

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22617

HCS_D2

Homocitrate synthase post-HMGL domain-like

287

366

0.95

PF08502

LeuA_dimer

LeuA allosteric (dimerisation) domain

370

512

0.93

PF00682

HMGL-like

HMGL-like

3

272

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eeg-assembly1.cif.gz_B crystal structure of a 2-isopropylmalate synthase from cytophaga hutchinsonii 0.8978 1 283
3eeg-assembly1.cif.gz_A crystal structure of a 2-isopropylmalate synthase from cytophaga hutchinsonii 0.8975 1 283
3eeg-assembly1.cif.gz_B crystal structure of a 2-isopropylmalate synthase from cytophaga hutchinsonii 0.8946 1 283
3eeg-assembly1.cif.gz_A crystal structure of a 2-isopropylmalate synthase from cytophaga hutchinsonii 0.8943 1 283
3ewb-assembly1.cif.gz_X-2 crystal structure of n-terminal domain of putative 2-isopropylmalate synthase from listeria monocytogenes 0.8738 1 276
ID Description Score Start End Superfamily
af_Q57926_26_296_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9235 3 281 3.20.20.70
3ivsA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9093 3 283 3.20.20.70
af_Q57926_26_296_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9007 3 281 3.20.20.70
4ov9A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8989 1 283 3.20.20.70
4ov9A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8959 1 283 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A6B3G0J7-F1-model_v4 Citramalate synthase 0.9972 96 186 GO:0019752
GO:0046912
AF-A0A3D0J176-F1-model_v4 (R)-citramalate synthase (EC 2.3.3.21) 0.9911 116 221 GO:0009097
GO:0046912
AF-A0A212DQD9-F1-model_v4 deleted 0.9894 75 196
AF-A0A382FQV9-F1-model_v4 (R)-citramalate synthase (EC 2.3.3.21) 0.9814 29 276 GO:0009097
GO:0046912
AF-A0A350M089-F1-model_v4 Citramalate synthase 0.9787 431 516 GO:0003852
GO:0009098

Map