F313995
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 205 | 157 | 158 | 222 |
Family's Representative Sequence
| Representative Sequence | 3300028786|Ga0307517_10000008|Ga0307517_10000008171 |
| Length | 222 |
| Sequence | MARLARVVIPDHPHHVTQRGNGRARTFFGDDDYALYRDLLAENCRAAGVVWGWCLMPNHVHLILVPSDPDGLRRALARVHRSYAGIIQARRKRSGHFWQGRFGAVAMDEQHLAAALRYVSLNPVRARLVERAQDWRWASTRAHLRGKDDGITALKPIRDRFPQFADLLACEPEADLFERLRAAESVGRPLGDDRFLARLERRTGRALKPGKRGPKASGPEKD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237094 | Bradyrhizobium sp. WSM3983 | Isolate | Nodule |
| 2 | 2585427527 | Rhizobium lusitanum YR374 | Isolate | Rhizosphere |
| 3 | 2615840626 | Rhizobium lusitanum P1-7 | Isolate | Nodule |
| 4 | 2744054633 | Bradyrhizobium neotropicale BR 10247 | Isolate | Unclassified |
| 5 | 2775507266 | Rhizobium tropici PRF 81 | Isolate | Nodule |
| 6 | 2841957949 | Bradyrhizobium sp. CIR1 | Isolate | Nodule |
| 7 | 2842509118 | Rhizobium paranaense SEMIA 4064 | Isolate | Nodule |
| 8 | 2876761206 | Bradyrhizobium centrolobii BR 10245 | Isolate | Nodule |
| 9 | 2908756301 | Bradyrhizobium ivorense CI-41S | Isolate | Nodule |
| 10 | 2922425934 | |||
| 11 | 2932794094 | Bradyrhizobium sp. S3.2.6 | Isolate | Nodule |
| 12 | 2932801729 | Bradyrhizobium sp. S3.3.6 | Isolate | Nodule |
| 13 | 2935616580 | Bradyrhizobium sp. RT7a | Isolate | Nodule |
| 14 | 2935630451 | Bradyrhizobium sp. I1.14.4 | Isolate | Nodule |
| 15 | 2935648319 | Bradyrhizobium sp. JR4.3 | Isolate | Nodule |
| 16 | 2935656913 | Bradyrhizobium sp. JR5.3 | Isolate | Nodule |
| 17 | 2935694250 | Bradyrhizobium sp. LA6.1 | Isolate | Nodule |
| 18 | 2935703347 | Bradyrhizobium sp. LA6.10 | Isolate | Nodule |
| 19 | 2935801545 | Bradyrhizobium sp. RT10b | Isolate | Nodule |
| 20 | 2935855204 | Bradyrhizobium sp. RT7b | Isolate | Nodule |
| 21 | 2935864058 | Bradyrhizobium sp. RT9a | Isolate | Nodule |
| 22 | 2935873716 | Bradyrhizobium sp. RT9b | Isolate | Nodule |
| 23 | 2935883170 | Bradyrhizobium sp. S3.12.5 | Isolate | Nodule |
| 24 | 2935959822 | Bradyrhizobium sp. F1.4.3 | Isolate | Nodule |
| 25 | 2935992306 | Bradyrhizobium sp. I1.7.5 | Isolate | Nodule |
| 26 | 2936002035 | Bradyrhizobium sp. I1.8.5 | Isolate | Nodule |
| 27 | 2936011229 | Bradyrhizobium sp. JR1.1 | Isolate | Nodule |
| 28 | 2936019824 | Bradyrhizobium sp. JR1.5 | Isolate | Nodule |
| 29 | 2936028420 | Bradyrhizobium sp. JR1.7 | Isolate | Nodule |
| 30 | 2936046547 | Bradyrhizobium sp. JR3.12 | Isolate | Nodule |
| 31 | 2936055302 | Bradyrhizobium sp. JR4.1 | Isolate | Nodule |
| 32 | 2941507105 | Bradyrhizobium sp. i1.12.3 | Isolate | Nodule |
| 33 | 2941515067 | Bradyrhizobium sp. i1.14.1 | Isolate | Nodule |
| 34 | 2941523033 | Bradyrhizobium sp. i1.8.4 | Isolate | Nodule |
| 35 | 3005594810 | Bradyrhizobium sp. CCBAU 53340 | Isolate | Nodule |
| 36 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 37 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 38 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 39 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 40 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 42 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 43 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 44 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 45 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 46 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 47 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 48 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 49 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 50 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 51 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 52 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 53 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 55 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 69 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 70 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 71 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 90 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 91 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 92 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 93 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 94 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 95 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 96 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 97 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 98 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 99 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 100 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 101 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 102 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 103 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 104 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 105 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 106 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 107 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 108 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 119 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 120 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 121 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 122 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 123 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 124 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 125 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 126 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 127 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 128 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 129 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 130 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 131 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 132 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 134 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 135 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300053079 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere | Metagenome | Endosphere |
| 137 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 141 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 142 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 143 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 144 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 145 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 146 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 147 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 148 | 3300053150 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere | Metagenome | Endosphere |
| 149 | 3300053162 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere | Metagenome | Endosphere |
| 150 | 3300053163 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere | Metagenome | Endosphere |
| 151 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 152 | 3300053725 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere | Metagenome | Endosphere |
| 153 | 3300053735 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere | Metagenome | Endosphere |
| 154 | 8006926726 | Bradyrhizobium guangdongense SM32 | Isolate | Unclassified |
| 155 | 8006973647 | Bradyrhizobium septentrionale 162S2 | Isolate | Nodule |
| 156 | 8016630954 | Bradyrhizobium sp. F1.13.1 | Isolate | Nodule |
| 157 | 8056967851 | Bradyrhizobium zhengyangense WYCCWR 12678 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 77.94 |
| Metatranscriptomes | 0 |
| Isolates | 22.06 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.71 |
| Nodule | 20 |
| Rhizoplane | 2.44 |
| Rhizosphere | 43.41 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 22.44 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10053857 | 3300003203 | Bacteria | 1333 |
| 2 | JGI25153J46596_10004112 | 3300003215 | Bacteria | 7914 |
| 3 | Ga0068869_100601861 | 3300005334 | Bacteria | 929 |
| 4 | Ga0070682_100233535 | 3300005337 | Bacteria | 1316 |
| 5 | Ga0070668_100096774 | 3300005347 | Bacteria | 2333 |
| 6 | Ga0070706_100035922 | 3300005467 | Bacteria | 4576 |
| 7 | Ga0070698_100031426 | 3300005471 | Bacteria | 5504 |
| 8 | Ga0070698_100500548 | 3300005471 | Bacteria | 1153 |
| 9 | Ga0070698_100540250 | 3300005471 | Bacteria | 1105 |
| 10 | Ga0070679_100419350 | 3300005530 | Bacteria | 1284 |
| 11 | Ga0070665_100079953 | 3300005548 | Bacteria | 3274 |
| 12 | Ga0070665_100096469 | 3300005548 | Bacteria | 2962 |
| 13 | Ga0068856_100829364 | 3300005614 | Bacteria | 944 |
| 14 | Ga0068856_100856114 | 3300005614 | Unclassified | 928 |
| 15 | Ga0068859_100390178 | 3300005617 | Bacteria | 1488 |
| 16 | Ga0068863_100084084 | 3300005841 | Bacteria | 3016 |
| 17 | Ga0068863_101239541 | 3300005841 | Bacteria | 752 |
| 18 | Ga0068858_100059331 | 3300005842 | Bacteria | 3536 |
| 19 | Ga0068858_100368077 | 3300005842 | Bacteria | 1378 |
| 20 | Ga0068858_100774154 | 3300005842 | Unclassified | 936 |
| 21 | Ga0068860_100000317 | 3300005843 | Bacteria | 65673 |
| 22 | Ga0068862_100030933 | 3300005844 | Bacteria | 4513 |
| 23 | Ga0068862_100612723 | 3300005844 | Bacteria | 1046 |
| 24 | Ga0081539_10174290 | 3300005985 | Bacteria | 1014 |
| 25 | Ga0075363_100073695 | 3300006048 | Bacteria | 1858 |
| 26 | Ga0097620_100293085 | 3300006931 | Bacteria | 1720 |
| 27 | Ga0097620_100390216 | 3300006931 | Bacteria | 1488 |
| 28 | Ga0099795_10248251 | 3300007788 | Bacteria | 767 |
| 29 | Ga0105240_10317706 | 3300009093 | Bacteria | 1776 |
| 30 | Ga0111539_11218731 | 3300009094 | Bacteria | 874 |
| 31 | Ga0105248_10153836 | 3300009177 | Bacteria | 2595 |
| 32 | Ga0105248_10585321 | 3300009177 | Bacteria | 1259 |
| 33 | Ga0105237_10039569 | 3300009545 | Bacteria | 4759 |
| 34 | Ga0105237_10278391 | 3300009545 | Bacteria | 1675 |
| 35 | Ga0105237_10720160 | 3300009545 | Bacteria | 1004 |
| 36 | Ga0105238_10283647 | 3300009551 | Bacteria | 1638 |
| 37 | Ga0105239_10523261 | 3300010375 | Bacteria | 1349 |
| 38 | Ga0157369_10157792 | 3300013105 | Bacteria | 2396 |
| 39 | Ga0157378_10712379 | 3300013297 | Bacteria | 1024 |
| 40 | Ga0157375_11110923 | 3300013308 | Bacteria | 926 |
| 41 | Ga0163163_10337245 | 3300014325 | Bacteria | 1563 |
| 42 | Ga0157380_11207031 | 3300014326 | Bacteria | 800 |
| 43 | Ga0157379_10641635 | 3300014968 | Bacteria | 994 |
| 44 | Ga0157376_11073550 | 3300014969 | Bacteria | 830 |
| 45 | Ga0213874_10137091 | 3300021377 | Bacteria | 845 |
| 46 | Ga0213876_10040732 | 3300021384 | Bacteria | 2454 |
| 47 | Ga0213875_10010877 | 3300021388 | Bacteria | 4548 |
| 48 | Ga0209437_100051 | 3300025233 | Bacteria | 392523 |
| 49 | Ga0209233_1000113 | 3300025261 | Bacteria | 253455 |
| 50 | Ga0207692_10026406 | 3300025898 | Bacteria | 2724 |
| 51 | Ga0207707_10008077 | 3300025912 | Bacteria | 9136 |
| 52 | Ga0207707_10099605 | 3300025912 | Bacteria | 2540 |
| 53 | Ga0207695_10017375 | 3300025913 | Bacteria | 8371 |
| 54 | Ga0207671_10019664 | 3300025914 | Bacteria | 5159 |
| 55 | Ga0207671_10235941 | 3300025914 | Bacteria | 1436 |
| 56 | Ga0207694_10458815 | 3300025924 | Bacteria | 1064 |
| 57 | Ga0207661_10526510 | 3300025944 | Bacteria | 1081 |
| 58 | Ga0207668_10051317 | 3300025972 | Bacteria | 2848 |
| 59 | Ga0207640_10155268 | 3300025981 | Bacteria | 1686 |
| 60 | Ga0207703_10136395 | 3300026035 | Bacteria | 2125 |
| 61 | Ga0207703_10275427 | 3300026035 | Bacteria | 1526 |
| 62 | Ga0207639_10283478 | 3300026041 | Bacteria | 1458 |
| 63 | Ga0207641_10048742 | 3300026088 | Bacteria | 3577 |
| 64 | Ga0207641_10611241 | 3300026088 | Bacteria | 1068 |
| 65 | Ga0207641_10873567 | 3300026088 | Bacteria | 892 |
| 66 | Ga0207675_100239143 | 3300026118 | Bacteria | 1754 |
| 67 | Ga0207683_10230862 | 3300026121 | Bacteria | 1687 |
| 68 | Ga0268266_10061721 | 3300028379 | Bacteria | 3233 |
| 69 | Ga0268266_10231474 | 3300028379 | Bacteria | 1702 |
| 70 | Ga0268265_10034236 | 3300028380 | Bacteria | 3700 |
| 71 | Ga0268265_10246163 | 3300028380 | Bacteria | 1580 |
| 72 | Ga0268264_10000035 | 3300028381 | Bacteria | 398196 |
| 73 | Ga0265323_10014125 | 3300028653 | Bacteria | 3169 |
| 74 | Ga0307517_10000008 | 3300028786 | Bacteria | 243202 |
| 75 | Ga0307517_10000124 | 3300028786 | Bacteria | 115570 |
| 76 | Ga0307517_10051034 | 3300028786 | Bacteria | 4186 |
| 77 | Ga0307515_10153661 | 3300028794 | Bacteria | 2390 |
| 78 | Ga0265338_10000065 | 3300028800 | Bacteria | 188966 |
| 79 | Ga0265324_10023035 | 3300029957 | Bacteria | 2221 |
| 80 | Ga0265340_10161047 | 3300031247 | Bacteria | 1019 |
| 81 | Ga0307513_10032426 | 3300031456 | Bacteria | 5891 |
| 82 | Ga0307513_10556116 | 3300031456 | Bacteria | 859 |
| 83 | Ga0307509_10044468 | 3300031507 | Bacteria | 4798 |
| 84 | Ga0307508_10000008 | 3300031616 | Bacteria | 265023 |
| 85 | Ga0307508_10066167 | 3300031616 | Bacteria | 3183 |
| 86 | Ga0307508_10257819 | 3300031616 | Bacteria | 1339 |
| 87 | Ga0307516_10027217 | 3300031730 | Bacteria | 5798 |
| 88 | Ga0307510_10293911 | 3300033180 | Bacteria | 1089 |
| 89 | Ga0373927_0324181 | 3300035695 | Bacteria | 1014 |
| 90 | Ga0373947_0092129 | 3300035725 | Bacteria | 1892 |
| 91 | Ga0373925_0168103 | 3300037068 | Bacteria | 1730 |
| 92 | Ga0436364_0378577 | 3300037853 | Bacteria | 2135 |
| 93 | Ga0436364_0728561 | 3300037853 | Bacteria | 12016 |
| 94 | Ga0436364_1527600 | 3300037853 | Bacteria | 3080 |
| 95 | Ga0436365_0487327 | 3300039437 | Bacteria | 3702 |
| 96 | Ga0436365_0983347 | 3300039437 | Bacteria | 3402 |
| 97 | Ga0436363_1381211 | 3300039450 | Bacteria | 1033 |
| 98 | Ga0436362_1157824 | 3300039453 | Bacteria | 9499 |
| 99 | Ga0439432_079859 | 3300042006 | Bacteria | 991 |
| 100 | Ga0495590_0137251 | 3300046457 | Bacteria | 882 |
| 101 | Ga0495638_0039795 | 3300046460 | Bacteria | 2982 |
| 102 | Ga0495605_0063378 | 3300046474 | Bacteria | 1764 |
| 103 | Ga0495664_0356970 | 3300046477 | Bacteria | 880 |
| 104 | Ga0495606_0269153 | 3300046507 | Bacteria | 937 |
| 105 | Ga0495645_0056480 | 3300046543 | Bacteria | 2850 |
| 106 | Ga0495658_0402443 | 3300046683 | Bacteria | 873 |
| 107 | Ga0495672_0079513 | 3300047320 | Bacteria | 1831 |
| 108 | Ga0495602_0539471 | 3300048088 | Bacteria | 810 |
| 109 | Ga0496100_0729225 | 3300048903 | Bacteria | 774 |
| 110 | Ga0496103_0119316 | 3300048906 | Bacteria | 1679 |
| 111 | Ga0496106_0014648 | 3300048909 | Bacteria | 5794 |
| 112 | Ga0496111_0288173 | 3300048914 | Bacteria | 1218 |
| 113 | Ga0496113_0088828 | 3300048916 | Bacteria | 2378 |
| 114 | Ga0496116_0085195 | 3300048919 | Bacteria | 1943 |
| 115 | Ga0496117_0004746 | 3300048920 | Bacteria | 14757 |
| 116 | Ga0496118_0005280 | 3300048921 | Bacteria | 14744 |
| 117 | Ga0496118_0039344 | 3300048921 | Bacteria | 3775 |
| 118 | Ga0496118_0201850 | 3300048921 | Bacteria | 1177 |
| 119 | Ga0496119_0024541 | 3300048922 | Bacteria | 4237 |
| 120 | Ga0496120_0134233 | 3300048923 | Bacteria | 1264 |
| 121 | Ga0496121_0027954 | 3300048924 | Bacteria | 5265 |
| 122 | Ga0496121_0056859 | 3300048924 | Bacteria | 3246 |
| 123 | Ga0496121_0112645 | 3300048924 | Bacteria | 2072 |
| 124 | Ga0496121_0118468 | 3300048924 | Bacteria | 2004 |
| 125 | Ga0496122_0025083 | 3300048925 | Bacteria | 5194 |
| 126 | Ga0496124_0012001 | 3300048927 | Bacteria | 8614 |
| 127 | Ga0496124_0157221 | 3300048927 | Bacteria | 1776 |
| 128 | Ga0496125_0063956 | 3300048928 | Bacteria | 2929 |
| 129 | Ga0496126_0032899 | 3300048929 | Bacteria | 4880 |
| 130 | Ga0496126_0116310 | 3300048929 | Bacteria | 2324 |
| 131 | Ga0496126_0140847 | 3300048929 | Bacteria | 2076 |
| 132 | Ga0496126_0220537 | 3300048929 | Bacteria | 1593 |
| 133 | Ga0496126_0287737 | 3300048929 | Bacteria | 1360 |
| 134 | Ga0501070_0149716 | 3300049586 | Bacteria | 1926 |
| 135 | nmdc:mga03n38_219596_c1 | 3300050490 | Bacteria | 991 |
| 136 | nmdc:mga06z11_74964_c1 | 3300050494 | Bacteria | 1800 |
| 137 | Ga0495601_0399461 | 3300053077 | Bacteria | 891 |
| 138 | Ga0500610_0191159 | 3300053079 | Bacteria | 994 |
| 139 | Ga0495655_0113055 | 3300053083 | Bacteria | 818 |
| 140 | Ga0495595_0229492 | 3300053084 | Bacteria | 927 |
| 141 | Ga0495619_0025926 | 3300053085 | Bacteria | 3769 |
| 142 | Ga0500644_0220611 | 3300053088 | Bacteria | 791 |
| 143 | Ga0500644_0226431 | 3300053088 | Bacteria | 782 |
| 144 | Ga0500651_0021673 | 3300053093 | Bacteria | 4008 |
| 145 | Ga0500566_0135995 | 3300053094 | Bacteria | 1309 |
| 146 | Ga0500572_003464 | 3300053111 | Bacteria | 3607 |
| 147 | Ga0500594_0023009 | 3300053118 | Bacteria | 1576 |
| 148 | Ga0500642_0028667 | 3300053130 | Bacteria | 2299 |
| 149 | Ga0500559_0000843 | 3300053136 | Bacteria | 19834 |
| 150 | Ga0500573_0176950 | 3300053140 | Bacteria | 1149 |
| 151 | Ga0500603_002976 | 3300053150 | Bacteria | 3658 |
| 152 | Ga0500638_076511 | 3300053162 | Bacteria | 1594 |
| 153 | Ga0500639_147968 | 3300053163 | Bacteria | 1087 |
| 154 | Ga0500639_213532 | 3300053163 | Bacteria | 814 |
| 155 | Ga0500636_0007066 | 3300053177 | Bacteria | 6477 |
| 156 | Ga0500636_0117268 | 3300053177 | Bacteria | 1497 |
| 157 | Ga0500576_121219 | 3300053725 | Bacteria | 1030 |
| 158 | Ga0500596_004635 | 3300053735 | Bacteria | 2505 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300047320 | Ga0495672_0079513 | Ga0495672_0079513_77_685 | 198 |
| 2 | 3300005334 | Ga0068869_100601861 | Ga0068869_1006018612 | 205 |
| 3 | 3300005844 | Ga0068862_100030933 | Ga0068862_1000309333 | 205 |
| 4 | 3300026118 | Ga0207675_100239143 | Ga0207675_1002391436 | 205 |
| 5 | 3300028380 | Ga0268265_10034236 | Ga0268265_100342363 | 205 |
| 6 | 3300048924 | Ga0496121_0112645 | Ga0496121_0112645_376_996 | 205 |
| 7 | iso_pu_bacteria | 8016630954 | 8016640552 | 209 |
| 8 | 3300048929 | Ga0496126_0287737 | Ga0496126_0287737_34_675 | 210 |
| 9 | iso_pu_bacteria | 8056967851 | 8056976216 | 210 |
| 10 | 3300053088 | Ga0500644_0226431 | Ga0500644_0226431_105_758 | 213 |
| 11 | 3300053083 | Ga0495655_0113055 | Ga0495655_0113055_124_804 | 215 |
| 12 | 3300053085 | Ga0495619_0025926 | Ga0495619_0025926_2999_3670 | 215 |
| 13 | 3300046477 | Ga0495664_0356970 | Ga0495664_0356970_41_712 | 216 |
| 14 | 3300048088 | Ga0495602_0539471 | Ga0495602_0539471_67_738 | 216 |
| 15 | 3300053077 | Ga0495601_0399461 | Ga0495601_0399461_109_780 | 216 |
| 16 | iso_pu_bacteria | 2935630451 | 2935633619 | 217 |
| 17 | iso_pu_bacteria | 2941507105 | 2941510510 | 217 |
| 18 | iso_pu_bacteria | 2941515067 | 2941517752 | 217 |
| 19 | iso_pu_bacteria | 2941523033 | 2941525769 | 217 |
| 20 | iso_pu_bacteria | 2513237094 | 2513638108 | 218 |
| 21 | iso_pu_bacteria | 2615840626 | 2616313308 | 218 |
| 22 | iso_pu_bacteria | 2585427527 | 2585531406 | 219 |
| 23 | iso_pu_bacteria | 2841957949 | 2841958865 | 219 |
| 24 | iso_pu_bacteria | 2908756301 | 2908761720 | 219 |
| 25 | iso_pu_bacteria | 2908756301 | 2908761722 | 219 |
| 26 | iso_pu_bacteria | 2922425934 | 2922431308 | 219 |
| 27 | iso_pu_bacteria | 2935616580 | 2935622849 | 219 |
| 28 | iso_pu_bacteria | 2935648319 | 2935649855 | 219 |
| 29 | iso_pu_bacteria | 2935656913 | 2935658630 | 219 |
| 30 | iso_pu_bacteria | 2935694250 | 2935696399 | 219 |
| 31 | iso_pu_bacteria | 2935703347 | 2935712186 | 219 |
| 32 | iso_pu_bacteria | 2935703347 | 2935712190 | 219 |
| 33 | iso_pu_bacteria | 2935801545 | 2935807492 | 219 |
| 34 | iso_pu_bacteria | 2935855204 | 2935861097 | 219 |
| 35 | iso_pu_bacteria | 2935864058 | 2935865635 | 219 |
| 36 | iso_pu_bacteria | 2935873716 | 2935878136 | 219 |
| 37 | iso_pu_bacteria | 2935959822 | 2935966645 | 219 |
| 38 | iso_pu_bacteria | 2935992306 | 2935994448 | 219 |
| 39 | iso_pu_bacteria | 2936002035 | 2936007828 | 219 |
| 40 | iso_pu_bacteria | 2936011229 | 2936012663 | 219 |
| 41 | iso_pu_bacteria | 2936019824 | 2936021227 | 219 |
| 42 | iso_pu_bacteria | 2936028420 | 2936029956 | 219 |
| 43 | iso_pu_bacteria | 2936046547 | 2936047421 | 219 |
| 44 | iso_pu_bacteria | 2936055302 | 2936057421 | 219 |
| 45 | iso_pu_bacteria | 8006926726 | 8006932133 | 219 |
| 46 | iso_pu_bacteria | 8006973647 | 8006979910 | 219 |
| 47 | iso_pu_bacteria | 8056967851 | 8056975488 | 219 |
| 48 | 3300005347 | Ga0070668_100096774 | Ga0070668_1000967744 | 220 |
| 49 | 3300005617 | Ga0068859_100390178 | Ga0068859_1003901782 | 220 |
| 50 | 3300005841 | Ga0068863_100084084 | Ga0068863_1000840842 | 220 |
| 51 | 3300005841 | Ga0068863_101239541 | Ga0068863_1012395411 | 220 |
| 52 | 3300005842 | Ga0068858_100059331 | Ga0068858_1000593312 | 220 |
| 53 | 3300005843 | Ga0068860_100000317 | Ga0068860_10000031729 | 220 |
| 54 | 3300005844 | Ga0068862_100612723 | Ga0068862_1006127232 | 220 |
| 55 | 3300006931 | Ga0097620_100390216 | Ga0097620_1003902162 | 220 |
| 56 | 3300009545 | Ga0105237_10039569 | Ga0105237_100395694 | 220 |
| 57 | 3300013297 | Ga0157378_10712379 | Ga0157378_107123792 | 220 |
| 58 | 3300025972 | Ga0207668_10051317 | Ga0207668_100513173 | 220 |
| 59 | 3300026035 | Ga0207703_10136395 | Ga0207703_101363952 | 220 |
| 60 | 3300026088 | Ga0207641_10048742 | Ga0207641_100487422 | 220 |
| 61 | 3300026088 | Ga0207641_10611241 | Ga0207641_106112412 | 220 |
| 62 | 3300026121 | Ga0207683_10230862 | Ga0207683_102308622 | 220 |
| 63 | 3300028380 | Ga0268265_10246163 | Ga0268265_102461631 | 220 |
| 64 | 3300028381 | Ga0268264_10000035 | Ga0268264_1000003576 | 220 |
| 65 | 3300042006 | Ga0439432_079859 | Ga0439432_079859_220_882 | 220 |
| 66 | 3300046457 | Ga0495590_0137251 | Ga0495590_0137251_104_766 | 220 |
| 67 | 3300048914 | Ga0496111_0288173 | Ga0496111_0288173_284_952 | 220 |
| 68 | 3300048929 | Ga0496126_0140847 | Ga0496126_0140847_1383_2045 | 220 |
| 69 | iso_pu_bacteria | 2775507266 | 2778175489 | 220 |
| 70 | iso_pu_bacteria | 2842509118 | 2842511045 | 220 |
| 71 | iso_pu_bacteria | 2876761206 | 2876770779 | 220 |
| 72 | iso_pu_bacteria | 3005594810 | 3005596941 | 220 |
| 73 | 3300005530 | Ga0070679_100419350 | Ga0070679_1004193502 | 221 |
| 74 | 3300005614 | Ga0068856_100829364 | Ga0068856_1008293641 | 221 |
| 75 | 3300006048 | Ga0075363_100073695 | Ga0075363_1000736953 | 221 |
| 76 | 3300014326 | Ga0157380_11207031 | Ga0157380_112070311 | 221 |
| 77 | 3300014969 | Ga0157376_11073550 | Ga0157376_110735501 | 221 |
| 78 | 3300021384 | Ga0213876_10040732 | Ga0213876_100407323 | 221 |
| 79 | 3300021388 | Ga0213875_10010877 | Ga0213875_100108772 | 221 |
| 80 | 3300028653 | Ga0265323_10014125 | Ga0265323_100141252 | 221 |
| 81 | 3300028800 | Ga0265338_10000065 | Ga0265338_1000006579 | 221 |
| 82 | 3300029957 | Ga0265324_10023035 | Ga0265324_100230352 | 221 |
| 83 | 3300037853 | Ga0436364_0378577 | Ga0436364_0378577_1181_1846 | 221 |
| 84 | 3300037853 | Ga0436364_0728561 | Ga0436364_0728561_11048_11713 | 221 |
| 85 | 3300037853 | Ga0436364_1527600 | Ga0436364_1527600_748_1413 | 221 |
| 86 | 3300039437 | Ga0436365_0983347 | Ga0436365_0983347_1869_2534 | 221 |
| 87 | 3300039453 | Ga0436362_1157824 | Ga0436362_1157824_1109_1774 | 221 |
| 88 | 3300048921 | Ga0496118_0201850 | Ga0496118_0201850_493_1158 | 221 |
| 89 | 3300048923 | Ga0496120_0134233 | Ga0496120_0134233_170_835 | 221 |
| 90 | 3300048929 | Ga0496126_0220537 | Ga0496126_0220537_187_852 | 221 |
| 91 | 3300050494 | nmdc:mga06z11_74964_c1 | nmdc:mga06z11_74964_c1_152_862 | 221 |
| 92 | 3300053150 | Ga0500603_002976 | Ga0500603_002976_2757_3422 | 221 |
| 93 | 3300053177 | Ga0500636_0007066 | Ga0500636_0007066_1910_2575 | 221 |
| 94 | 3300053177 | Ga0500636_0117268 | Ga0500636_0117268_366_1031 | 221 |
| 95 | iso_pu_bacteria | 2744054633 | 2745074944 | 221 |
| 96 | iso_pu_bacteria | 2744054633 | 2745074945 | 221 |
| 97 | iso_pu_bacteria | 2932794094 | 2932800620 | 221 |
| 98 | iso_pu_bacteria | 2932801729 | 2932803017 | 221 |
| 99 | iso_pu_bacteria | 2932801729 | 2932803020 | 221 |
| 100 | iso_pu_bacteria | 2935883170 | 2935885356 | 221 |
| 101 | iso_pu_bacteria | 2935883170 | 2935885359 | 221 |
| 102 | iso_pu_bacteria | 2935959822 | 2935959822 | 221 |
| 103 | 3300003215 | JGI25153J46596_10004112 | JGI25153J46596_100041127 | 222 |
| 104 | 3300005548 | Ga0070665_100079953 | Ga0070665_1000799534 | 222 |
| 105 | 3300025913 | Ga0207695_10017375 | Ga0207695_1001737513 | 222 |
| 106 | 3300028786 | Ga0307517_10000008 | Ga0307517_10000008171 | 222 |
| 107 | 3300035725 | Ga0373947_0092129 | Ga0373947_0092129_10_678 | 222 |
| 108 | 3300048903 | Ga0496100_0729225 | Ga0496100_0729225_71_742 | 222 |
| 109 | 3300048906 | Ga0496103_0119316 | Ga0496103_0119316_664_1335 | 222 |
| 110 | 3300048916 | Ga0496113_0088828 | Ga0496113_0088828_1549_2220 | 222 |
| 111 | 3300048919 | Ga0496116_0085195 | Ga0496116_0085195_1019_1690 | 222 |
| 112 | 3300048920 | Ga0496117_0004746 | Ga0496117_0004746_7835_8506 | 222 |
| 113 | 3300048921 | Ga0496118_0005280 | Ga0496118_0005280_6239_6910 | 222 |
| 114 | 3300048922 | Ga0496119_0024541 | Ga0496119_0024541_1566_2237 | 222 |
| 115 | 3300048924 | Ga0496121_0118468 | Ga0496121_0118468_1211_1879 | 222 |
| 116 | 3300048925 | Ga0496122_0025083 | Ga0496122_0025083_2240_2911 | 222 |
| 117 | 3300048929 | Ga0496126_0116310 | Ga0496126_0116310_521_1189 | 222 |
| 118 | 3300049586 | Ga0501070_0149716 | Ga0501070_0149716_380_1051 | 222 |
| 119 | 3300053079 | Ga0500610_0191159 | Ga0500610_0191159_115_783 | 222 |
| 120 | 3300053118 | Ga0500594_0023009 | Ga0500594_0023009_219_887 | 222 |
| 121 | 3300005471 | Ga0070698_100540250 | Ga0070698_1005402501 | 223 |
| 122 | 3300005842 | Ga0068858_100368077 | Ga0068858_1003680772 | 223 |
| 123 | 3300006931 | Ga0097620_100293085 | Ga0097620_1002930853 | 223 |
| 124 | 3300009093 | Ga0105240_10317706 | Ga0105240_103177062 | 223 |
| 125 | 3300009177 | Ga0105248_10153836 | Ga0105248_101538363 | 223 |
| 126 | 3300009545 | Ga0105237_10278391 | Ga0105237_102783912 | 223 |
| 127 | 3300009551 | Ga0105238_10283647 | Ga0105238_102836471 | 223 |
| 128 | 3300010375 | Ga0105239_10523261 | Ga0105239_105232611 | 223 |
| 129 | 3300013105 | Ga0157369_10157792 | Ga0157369_101577922 | 223 |
| 130 | 3300013308 | Ga0157375_11110923 | Ga0157375_111109231 | 223 |
| 131 | 3300014968 | Ga0157379_10641635 | Ga0157379_106416351 | 223 |
| 132 | 3300025912 | Ga0207707_10008077 | Ga0207707_100080778 | 223 |
| 133 | 3300025912 | Ga0207707_10099605 | Ga0207707_100996051 | 223 |
| 134 | 3300025914 | Ga0207671_10019664 | Ga0207671_100196646 | 223 |
| 135 | 3300025914 | Ga0207671_10235941 | Ga0207671_102359412 | 223 |
| 136 | 3300025924 | Ga0207694_10458815 | Ga0207694_104588152 | 223 |
| 137 | 3300025944 | Ga0207661_10526510 | Ga0207661_105265102 | 223 |
| 138 | 3300026035 | Ga0207703_10275427 | Ga0207703_102754271 | 223 |
| 139 | 3300026041 | Ga0207639_10283478 | Ga0207639_102834781 | 223 |
| 140 | 3300028786 | Ga0307517_10000124 | Ga0307517_1000012477 | 223 |
| 141 | 3300028786 | Ga0307517_10051034 | Ga0307517_100510344 | 223 |
| 142 | 3300028786 | Ga0307517_10051034 | Ga0307517_100510345 | 223 |
| 143 | 3300028794 | Ga0307515_10153661 | Ga0307515_101536613 | 223 |
| 144 | 3300031456 | Ga0307513_10032426 | Ga0307513_100324265 | 223 |
| 145 | 3300031456 | Ga0307513_10556116 | Ga0307513_105561161 | 223 |
| 146 | 3300031507 | Ga0307509_10044468 | Ga0307509_100444685 | 223 |
| 147 | 3300031616 | Ga0307508_10000008 | Ga0307508_10000008129 | 223 |
| 148 | 3300031616 | Ga0307508_10066167 | Ga0307508_100661678 | 223 |
| 149 | 3300031730 | Ga0307516_10027217 | Ga0307516_100272173 | 223 |
| 150 | 3300035695 | Ga0373927_0324181 | Ga0373927_0324181_34_705 | 223 |
| 151 | 3300037068 | Ga0373925_0168103 | Ga0373925_0168103_166_837 | 223 |
| 152 | 3300039437 | Ga0436365_0487327 | Ga0436365_0487327_2738_3430 | 223 |
| 153 | 3300046474 | Ga0495605_0063378 | Ga0495605_0063378_587_1258 | 223 |
| 154 | 3300046507 | Ga0495606_0269153 | Ga0495606_0269153_223_894 | 223 |
| 155 | 3300046543 | Ga0495645_0056480 | Ga0495645_0056480_1908_2579 | 223 |
| 156 | 3300048909 | Ga0496106_0014648 | Ga0496106_0014648_3106_3777 | 223 |
| 157 | 3300048921 | Ga0496118_0039344 | Ga0496118_0039344_229_900 | 223 |
| 158 | 3300048924 | Ga0496121_0027954 | Ga0496121_0027954_1613_2284 | 223 |
| 159 | 3300048924 | Ga0496121_0056859 | Ga0496121_0056859_2105_2776 | 223 |
| 160 | 3300048927 | Ga0496124_0012001 | Ga0496124_0012001_2232_2903 | 223 |
| 161 | 3300048927 | Ga0496124_0157221 | Ga0496124_0157221_364_1041 | 223 |
| 162 | 3300048928 | Ga0496125_0063956 | Ga0496125_0063956_618_1289 | 223 |
| 163 | 3300048929 | Ga0496126_0032899 | Ga0496126_0032899_55_726 | 223 |
| 164 | 3300053093 | Ga0500651_0021673 | Ga0500651_0021673_993_1664 | 223 |
| 165 | 3300053094 | Ga0500566_0135995 | Ga0500566_0135995_398_1069 | 223 |
| 166 | 3300053111 | Ga0500572_003464 | Ga0500572_003464_513_1184 | 223 |
| 167 | 3300053130 | Ga0500642_0028667 | Ga0500642_0028667_1417_2088 | 223 |
| 168 | 3300053136 | Ga0500559_0000843 | Ga0500559_0000843_1454_2125 | 223 |
| 169 | 3300053140 | Ga0500573_0176950 | Ga0500573_0176950_189_860 | 223 |
| 170 | 3300053162 | Ga0500638_076511 | Ga0500638_076511_116_787 | 223 |
| 171 | 3300053163 | Ga0500639_147968 | Ga0500639_147968_104_775 | 223 |
| 172 | 3300053163 | Ga0500639_213532 | Ga0500639_213532_130_801 | 223 |
| 173 | 3300053725 | Ga0500576_121219 | Ga0500576_121219_37_708 | 223 |
| 174 | 3300053735 | Ga0500596_004635 | Ga0500596_004635_294_965 | 223 |
| 175 | 3300005337 | Ga0070682_100233535 | Ga0070682_1002335351 | 224 |
| 176 | 3300005467 | Ga0070706_100035922 | Ga0070706_1000359224 | 224 |
| 177 | 3300005471 | Ga0070698_100031426 | Ga0070698_1000314265 | 224 |
| 178 | 3300007788 | Ga0099795_10248251 | Ga0099795_102482511 | 224 |
| 179 | 3300021377 | Ga0213874_10137091 | Ga0213874_101370911 | 224 |
| 180 | 3300025233 | Ga0209437_100051 | Ga0209437_100051248 | 224 |
| 181 | 3300025261 | Ga0209233_1000113 | Ga0209233_100011395 | 224 |
| 182 | 3300025898 | Ga0207692_10026406 | Ga0207692_100264062 | 224 |
| 183 | 3300028379 | Ga0268266_10061721 | Ga0268266_100617213 | 224 |
| 184 | 3300031247 | Ga0265340_10161047 | Ga0265340_101610471 | 224 |
| 185 | 3300031616 | Ga0307508_10257819 | Ga0307508_102578192 | 224 |
| 186 | 3300033180 | Ga0307510_10293911 | Ga0307510_102939112 | 224 |
| 187 | 3300039450 | Ga0436363_1381211 | Ga0436363_1381211_206_880 | 224 |
| 188 | 3300053084 | Ga0495595_0229492 | Ga0495595_0229492_172_846 | 224 |
| 189 | 3300053088 | Ga0500644_0220611 | Ga0500644_0220611_86_760 | 224 |
| 190 | 3300003203 | JGI25406J46586_10053857 | JGI25406J46586_100538571 | 225 |
| 191 | 3300005471 | Ga0070698_100500548 | Ga0070698_1005005482 | 225 |
| 192 | 3300005548 | Ga0070665_100096469 | Ga0070665_1000964693 | 225 |
| 193 | 3300005614 | Ga0068856_100856114 | Ga0068856_1008561142 | 225 |
| 194 | 3300005842 | Ga0068858_100774154 | Ga0068858_1007741541 | 225 |
| 195 | 3300005985 | Ga0081539_10174290 | Ga0081539_101742902 | 225 |
| 196 | 3300009094 | Ga0111539_11218731 | Ga0111539_112187311 | 225 |
| 197 | 3300009177 | Ga0105248_10585321 | Ga0105248_105853212 | 225 |
| 198 | 3300009545 | Ga0105237_10720160 | Ga0105237_107201602 | 225 |
| 199 | 3300014325 | Ga0163163_10337245 | Ga0163163_103372452 | 225 |
| 200 | 3300025981 | Ga0207640_10155268 | Ga0207640_101552682 | 225 |
| 201 | 3300026088 | Ga0207641_10873567 | Ga0207641_108735671 | 225 |
| 202 | 3300028379 | Ga0268266_10231474 | Ga0268266_102314741 | 225 |
| 203 | 3300046460 | Ga0495638_0039795 | Ga0495638_0039795_1863_2579 | 225 |
| 204 | 3300046683 | Ga0495658_0402443 | Ga0495658_0402443_124_801 | 225 |
| 205 | 3300050490 | nmdc:mga03n38_219596_c1 | nmdc:mga03n38_219596_c1_134_826 | 225 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4er8-assembly1.cif.gz_A | structure of the rep associates tyrosine transposase bound to a rep hairpin | 0.835 | 8 | 155 |
| 2xo6-assembly1.cif.gz_D | deinococcus radiodurans isdra2 transposase y132f mutant complexed with left end recognition and cleavage site | 0.8199 | 12 | 110 |
| 2xma-assembly1.cif.gz_B | deinococcus radiodurans isdra2 transposase right end dna complex | 0.804 | 12 | 110 |
| 2xqc-assembly1.cif.gz_A | deinococcus radiodurans isdra2 transposase complexed with left end recognition and cleavage site and zn | 0.7956 | 12 | 110 |
| 2a6o-assembly1.cif.gz_A | crystal structure of the ishp608 transposase in complex with stem-loop dna | 0.7732 | 12 | 120 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4er8A00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Transposase IS200-like | 0.835 | 8 | 155 | 3.30.70.1290 |
| 2ec2F00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Transposase IS200-like | 0.7992 | 12 | 110 | 3.30.70.1290 |
| 2a6mB01 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Transposase IS200-like | 0.7557 | 12 | 120 | 3.30.70.1290 |
| 2vjvB00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Transposase IS200-like | 0.7532 | 8 | 120 | 3.30.70.1290 |
| 2xm3E00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Transposase IS200-like | 0.7339 | 12 | 120 | 3.30.70.1290 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-Q987Z9-F1-model_v4 | Mll6834 protein | 0.9758 | 17 | 140 |
GO:0003677
GO:0004803 GO:0006313 |
| AF-A0A1F9NRY5-F1-model_v4 | Transposase | 0.9704 | 1 | 196 |
GO:0003677
GO:0004803 GO:0006313 |
| AF-A0A4Y9S5J1-F1-model_v4 | Transposase IS200-like domain-containing protein | 0.9684 | 1 | 109 |
GO:0003677
GO:0004803 GO:0006313 |
| AF-A0A1F9NRY5-F1-model_v4 | Transposase | 0.9656 | 1 | 196 |
GO:0003677
GO:0004803 GO:0006313 |
| AF-A0A7W6QX85-F1-model_v4 | deleted | 0.9635 | 1 | 170 |
|
Predicted Structure (AlphaFold2)
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