F314448

General Info

Members Datasets Scaffolds Average Seq Length
205 150 410 1062

Family's Representative Sequence

Representative Sequence 3300053092|Ga0500583_0000003|Ga0500583_0000003_52661_55981
Length 1106
Sequence LVQSQIPSLLLLAISHHQHFRIQKRKITAMKKGTCKNYLLTLICFLLCTPVLFSQVTTATLSGIIKDPKGAPLGSATVTIEFADAGFKQVLATKSDGRFTVPNLRVGGPYTVTVTFINFQPSVTDNVYLELGQNNSLDIQLHEKAAELEKITVTGRSGIFDNKKTGASTNINSRLIKALPTISRSADDYLRLTPSASFTYNGLSFAGRNGQYNNFSLDGAVFNNPFGLDAPTPGGQTNAQPISLDAIDQIQVNIAPYDVTQAGFTGAGINTVTKSGNNKFSGTVYGFYRNQSLTGSKIEKNKLVLPDLKQLQAGFALGGPVIKNKLFYFVSFETEQRSDEASSYVAQNSGNVGKTNTSRVLESDLQQVSSILKSKFNYETGPYQRYTLDQKNYKWLVKLDLNINASNRLSFTYNGLDAHKDKPAHPSAIGRRGPDFTTLQFRNSGYEIVNQLQSFGAELKSNFGSDYANKLRVVYTTFRDKRNPFSTPFPVINITKNNVRYIIAGHEPFSINNRLNQDAFQVTNNFNMFFKKHTVTAGASFESFKFANSFNLTGYGATLFSEADIKTFIDSVPVSHNYVFGSYPLDVDVAYARNRGIANQWTWYYLTVGQLSAYLQDEWQVEDNFRVTAGLRMDIPFYFNASYRNPVMNADGTASGKFDEGEPTLPNKDNLTLFDENGKSLTNGPGKDVDNTRLPSKKPLLSPRIGFNWDVKGDKTVQVRGGSGLFTGRFPFVWLGNHIGNPYSFFYNVTDRDFKWPQVWRSNIGTDIKIPYGTIFTVDVAYTKDVNGMMVRNYKLGTPSGTLNSGTGDNRKVYLPANQGTANTYAFTNTSVGYQFNITFQAQQYLEGGFYVMAGYNYLLAKDASSISAEISSDAFDRNPILNNSNKAVLSHSLYGNTHRIVAAFSKKFAYDDHLATTFSLFGSWNSGNRFAYVYGGDINNDGTGTNDLLYVPTDAEINTMQFTPLTDVNGNLQNAAAQRQGLKNFIANDKYLSKHRGEYTEKYAGQNPWIGQVDFRILQDFIFSPTKKPSTLQLSIDFVNLGNLVSSQWGVVKYATTSGYFQPLSVSYNGNSPVYQFDPSLTSTFTASPDLPSRWQMQVGLRYIF

Samples

Sample ID Description Type Environment
1 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
62 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
63 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
96 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
101 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
105 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
106 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
107 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
108 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
109 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
110 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
111 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
112 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
113 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
114 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
115 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
118 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
119 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
120 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
121 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
122 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
123 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
124 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
125 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
126 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
127 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
128 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
129 2738541278 Niastella sp. CF465 Isolate Unclassified
130 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
131 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
132 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
133 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
134 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
135 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
136 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
137 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
138 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
139 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
140 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
141 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
142 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
143 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
144 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
145 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
146 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
147 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
148 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
149 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
150 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.32
Metatranscriptomes 0
Isolates 12.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.63
Nodule 0
Rhizoplane 0
Rhizosphere 70.24
Stem 0
Stem Tuber 0
Unclassified 0.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500583_0000003 3300053092 Bacteria 229587
2 JGI24740J21852_10000876 3300001979 Bacteria 13317
3 JGI25154J39366_1000003 3300002738 Bacteria 397627
4 JGI25153J46596_10005403 3300003215 Bacteria 6711
5 rootH1_10055331 3300003316 Bacteria 13942
6 rootH2_10008284 3300003320 Bacteria 49220
7 rootH2_10146152 3300003320 Bacteria 6154
8 rootH1_10031419 3300003323 Bacteria 15609
9 Ga0055528_1000180 3300003790 Bacteria 53597
10 Ga0055530_10002883 3300003791 Bacteria 10469
11 Ga0055531_10000068 3300003794 Bacteria 112187
12 Ga0065165_1000019 3300005262 Bacteria 271815
13 Ga0065714_10003457 3300005288 Bacteria 7476
14 Ga0070670_100044725 3300005331 Bacteria 3806
15 Ga0068869_100017988 3300005334 Unclassified 4803
16 Ga0070666_10000056 3300005335 Bacteria 91596
17 Ga0070689_100002477 3300005340 Bacteria 12065
18 Ga0070668_100032780 3300005347 Bacteria 3953
19 Ga0070669_100002129 3300005353 Bacteria 14312
20 Ga0070675_100008892 3300005354 Bacteria 7807
21 Ga0070673_100001721 3300005364 Bacteria 13004
22 Ga0070667_100050645 3300005367 Bacteria 3501
23 Ga0070698_100006662 3300005471 Bacteria 12525
24 Ga0070698_100013395 3300005471 Bacteria 8679
25 Ga0068853_100000802 3300005539 Bacteria 21843
26 Ga0068853_100009421 3300005539 Bacteria 7867
27 Ga0070665_100000009 3300005548 Bacteria 562640
28 Ga0068852_100001171 3300005616 Bacteria 17366
29 Ga0068859_100000304 3300005617 Bacteria 48852
30 Ga0068859_100019252 3300005617 Bacteria 6857
31 Ga0068864_100009323 3300005618 Bacteria 8094
32 Ga0068861_100006629 3300005719 Bacteria 7900
33 Ga0068851_10000080 3300005834 Bacteria 54078
34 Ga0068863_100007690 3300005841 Bacteria 10540
35 Ga0068863_100022813 3300005841 Bacteria 5980
36 Ga0068863_100026372 3300005841 Bacteria 5544
37 Ga0068858_100005678 3300005842 Bacteria 12195
38 Ga0068860_100000103 3300005843 Bacteria 139076
39 Ga0068860_100008478 3300005843 Bacteria 10244
40 Ga0068860_100011009 3300005843 Bacteria 8919
41 Ga0068860_100032456 3300005843 Bacteria 5017
42 Ga0068860_100038230 3300005843 Bacteria 4591
43 Ga0068862_100002959 3300005844 Bacteria 14832
44 Ga0068862_100033940 3300005844 Bacteria 4316
45 Ga0075366_10016156 3300006195 Bacteria 4287
46 Ga0097621_100002482 3300006237 Bacteria 12635
47 Ga0097621_100005188 3300006237 Bacteria 9153
48 Ga0068871_100011961 3300006358 Bacteria 6389
49 Ga0068871_100016167 3300006358 Bacteria 5609
50 Ga0075428_100004788 3300006844 Bacteria 14994
51 Ga0075430_100004947 3300006846 Bacteria 11210
52 Ga0097620_100000304 3300006931 Bacteria 48852
53 Ga0097620_100019255 3300006931 Bacteria 6857
54 Ga0105244_10000035 3300009036 Bacteria 168428
55 Ga0105240_10000095 3300009093 Bacteria 180935
56 Ga0105240_10000155 3300009093 Bacteria 140485
57 Ga0105240_10001038 3300009093 Bacteria 49382
58 Ga0105240_10025491 3300009093 Bacteria 7769
59 Ga0111539_10007542 3300009094 Bacteria 13914
60 Ga0114129_10004138 3300009147 Bacteria 20495
61 Ga0105241_10002316 3300009174 Bacteria 14311
62 Ga0105237_10000061 3300009545 Bacteria 146107
63 Ga0105237_10001644 3300009545 Bacteria 29007
64 Ga0105237_10002264 3300009545 Bacteria 23954
65 Ga0105237_10005887 3300009545 Bacteria 13747
66 Ga0105238_10027837 3300009551 Bacteria 5760
67 Ga0105249_10005812 3300009553 Bacteria 10668
68 Ga0105249_10005821 3300009553 Bacteria 10664
69 Ga0105249_10006698 3300009553 Bacteria 10035
70 Ga0105249_10022441 3300009553 Bacteria 5653
71 Ga0105239_10000140 3300010375 Bacteria 101896
72 Ga0105239_10000614 3300010375 Bacteria 50708
73 Ga0105239_10004338 3300010375 Bacteria 16991
74 Ga0105239_10006659 3300010375 Bacteria 13359
75 Ga0157373_10013337 3300013100 Bacteria 6030
76 Ga0157374_10000004 3300013296 Bacteria 759774
77 Ga0157374_10008926 3300013296 Bacteria 8591
78 Ga0157378_10002976 3300013297 Bacteria 15054
79 Ga0163162_10001236 3300013306 Bacteria 23879
80 Ga0163162_10030556 3300013306 Bacteria 5338
81 Ga0157375_10013089 3300013308 Bacteria 7375
82 Ga0157380_10002419 3300014326 Bacteria 12572
83 Ga0157380_10007413 3300014326 Bacteria 7789
84 Ga0157380_10009721 3300014326 Bacteria 6902
85 Ga0157379_10027731 3300014968 Bacteria 5041
86 Ga0157376_10015695 3300014969 Bacteria 5729
87 Ga0182005_1000219 3300015265 Bacteria 37730
88 Ga0163161_10000007 3300017792 Bacteria 301614
89 Ga0163161_10015495 3300017792 Bacteria 5315
90 Ga0209436_102502 3300025208 Bacteria 5485
91 Ga0209258_100161 3300025242 Bacteria 151992
92 Ga0209646_1000004 3300025246 Bacteria 786587
93 Ga0209026_1000132 3300025250 Bacteria 119048
94 Ga0209148_1000161 3300025254 Bacteria 138759
95 Ga0209673_1000042 3300025273 Bacteria 300704
96 Ga0209130_1000735 3300025284 Bacteria 28852
97 Ga0209050_1000308 3300025298 Bacteria 99516
98 Ga0207426_1000034 3300025302 Bacteria 454016
99 Ga0207426_1000316 3300025302 Bacteria 94148
100 Ga0207426_1002967 3300025302 Bacteria 9931
101 Ga0209257_1000001 3300025304 Bacteria 2274655
102 Ga0209257_1001059 3300025304 Bacteria 36382
103 Ga0207656_10000051 3300025321 Bacteria 45971
104 Ga0207655_1000008 3300025728 Bacteria 734289
105 Ga0207645_10010468 3300025907 Bacteria 6368
106 Ga0207654_10003651 3300025911 Bacteria 7758
107 Ga0207695_10000043 3300025913 Bacteria 444585
108 Ga0207695_10000165 3300025913 Bacteria 195908
109 Ga0207695_10005392 3300025913 Bacteria 16989
110 Ga0207695_10026153 3300025913 Bacteria 6515
111 Ga0207671_10001914 3300025914 Bacteria 23114
112 Ga0207671_10003616 3300025914 Bacteria 15269
113 Ga0207671_10005594 3300025914 Bacteria 11543
114 Ga0207671_10006116 3300025914 Bacteria 10824
115 Ga0207671_10010986 3300025914 Bacteria 7414
116 Ga0207659_10004097 3300025926 Bacteria 8793
117 Ga0207706_10010977 3300025933 Bacteria 8258
118 Ga0207670_10010424 3300025936 Bacteria 5354
119 Ga0207691_10023675 3300025940 Bacteria 5782
120 Ga0207689_10001842 3300025942 Bacteria 20053
121 Ga0207689_10002171 3300025942 Bacteria 18459
122 Ga0207689_10002652 3300025942 Bacteria 16551
123 Ga0207679_10001478 3300025945 Bacteria 14731
124 Ga0207712_10004343 3300025961 Bacteria 8955
125 Ga0207639_10015312 3300026041 Bacteria 5408
126 Ga0207641_10000391 3300026088 Bacteria 51728
127 Ga0207641_10000957 3300026088 Bacteria 29671
128 Ga0207648_10018900 3300026089 Bacteria 6224
129 Ga0207648_10021837 3300026089 Bacteria 5750
130 Ga0207676_10016643 3300026095 Bacteria 5326
131 Ga0207674_10003145 3300026116 Bacteria 20348
132 Ga0207674_10009489 3300026116 Bacteria 11111
133 Ga0207675_100001343 3300026118 Bacteria 24671
134 Ga0207698_10001741 3300026142 Bacteria 12689
135 Ga0207428_10023834 3300027907 Bacteria 5140
136 Ga0268266_10000105 3300028379 Bacteria 176691
137 Ga0268264_10000013 3300028381 Bacteria 513859
138 Ga0268264_10001952 3300028381 Bacteria 18525
139 Ga0268264_10004023 3300028381 Bacteria 12591
140 Ga0268264_10028205 3300028381 Bacteria 4591
141 Ga0268264_10041106 3300028381 Bacteria 3822
142 Ga0307515_10000684 3300028794 Bacteria 78055
143 Ga0307511_10000135 3300030521 Bacteria 67934
144 Ga0307408_100002868 3300031548 Bacteria 11941
145 Ga0307508_10000438 3300031616 Bacteria 49716
146 Ga0307516_10003195 3300031730 Bacteria 21307
147 Ga0307413_10005723 3300031824 Bacteria 5586
148 Ga0307410_10000075 3300031852 Bacteria 34266
149 Ga0307406_10000038 3300031901 Bacteria 76386
150 Ga0307414_10000001 3300032004 Bacteria 1352954
151 Ga0307411_10000013 3300032005 Bacteria 145335
152 Ga0466972_0000047 3300044658 Bacteria 122901
153 Ga0466972_0002653 3300044658 Bacteria 8855
154 Ga0466957_0000205 3300044842 Bacteria 27570
155 Ga0495606_0021469 3300046507 Bacteria 4728
156 Ga0495633_0000296 3300046558 Bacteria 56728
157 Ga0495611_0000025 3300046648 Bacteria 118583
158 Ga0495687_000010 3300047443 Bacteria 413735
159 Ga0495686_0000086 3300047472 Bacteria 197490
160 Ga0495686_0008588 3300047472 Bacteria 7476
161 Ga0496121_0000028 3300048924 Bacteria 439193
162 Ga0501238_000035 3300049671 Bacteria 23620
163 Ga0501225_0000864 3300049705 Bacteria 9412
164 Ga0501241_000182 3300049758 Bacteria 14117
165 Ga0501266_000007 3300049763 Bacteria 291751
166 nmdc:mga0k408_15550_c1 3300050493 Bacteria 4208
167 nmdc:mga05p37_9986_c1 3300050507 Bacteria 11271
168 nmdc:mga08y16_10894_c1 3300050511 Bacteria 9551
169 Ga0500578_0000765 3300053086 Bacteria 37890
170 Ga0500644_0000227 3300053088 Bacteria 32271
171 Ga0500583_0001398 3300053092 Bacteria 6911
172 Ga0500641_0000006 3300053096 Bacteria 223991
173 Ga0500641_0000615 3300053096 Bacteria 12858
174 Ga0500658_0000013 3300053134 Bacteria 153702
175 Ga0500559_0005610 3300053136 Bacteria 5752
176 Ga0500577_0002562 3300053142 Bacteria 4656
177 Ga0500622_0001907 3300053156 Bacteria 15724
178 Ga0500622_0002044 3300053156 Bacteria 15039
179 Ga0500611_000013 3300053727 Bacteria 135447
180 2513235763 2513020052 Bacteria 5120511
181 2644011516 2643221600 Bacteria 5530138
182 2644369914 2643221667 Bacteria 5627472
183 2644642241 2643221716 Bacteria 4986332
184 2738725819 2738541278 Bacteria 9755573
185 2738731896 2738541279 Bacteria 6149495
186 2738764461 2738541285 Bacteria 6150075
187 2739213476 2738543007 Bacteria 6149845
188 2740000742 2739367857 Bacteria 5433684
189 2740005558 2739367858 Bacteria 5432813
190 2819572960 2818991442 Bacteria 8318214
191 2821139621 2821136567 Bacteria 8080116
192 2857614497 2857613821 Bacteria 4917088
193 2857619126 2857618242 Bacteria 5635925
194 2904419784 2904419702 Bacteria 5166287
195 2904471743 2904467357 Bacteria 8057758
196 2904556572 2904555929 Bacteria 5218588
197 2919193022 2919191525 Bacteria 5765973
198 2929153001 2929150217 Bacteria 5462483
199 2929179395 2929177148 Bacteria 7883697
200 2929245629 2929239360 Bacteria 7745570
201 2929922260 2929921140 Bacteria 8649150
202 2945981803 2945977869 Bacteria 7777518
203 2946018796 2946013367 Bacteria 7766675
204 8003154785 8003151029 Bacteria 8187759
205 8054308269 8054307821 Bacteria 5212224
206 Ga0500583_0000003
207 JGI24740J21852_10000876
208 JGI25154J39366_1000003
209 JGI25153J46596_10005403
210 rootH1_10055331
211 rootH2_10008284
212 rootH2_10146152
213 rootH1_10031419
214 Ga0055528_1000180
215 Ga0055530_10002883
216 Ga0055531_10000068
217 Ga0065165_1000019
218 Ga0065714_10003457
219 Ga0070670_100044725
220 Ga0068869_100017988
221 Ga0070666_10000056
222 Ga0070689_100002477
223 Ga0070668_100032780
224 Ga0070669_100002129
225 Ga0070675_100008892
226 Ga0070673_100001721
227 Ga0070667_100050645
228 Ga0070698_100006662
229 Ga0070698_100013395
230 Ga0068853_100000802
231 Ga0068853_100009421
232 Ga0070665_100000009
233 Ga0068852_100001171
234 Ga0068859_100000304
235 Ga0068859_100019252
236 Ga0068864_100009323
237 Ga0068861_100006629
238 Ga0068851_10000080
239 Ga0068863_100007690
240 Ga0068863_100022813
241 Ga0068863_100026372
242 Ga0068858_100005678
243 Ga0068860_100000103
244 Ga0068860_100008478
245 Ga0068860_100011009
246 Ga0068860_100032456
247 Ga0068860_100038230
248 Ga0068862_100002959
249 Ga0068862_100033940
250 Ga0075366_10016156
251 Ga0097621_100002482
252 Ga0097621_100005188
253 Ga0068871_100011961
254 Ga0068871_100016167
255 Ga0075428_100004788
256 Ga0075430_100004947
257 Ga0097620_100000304
258 Ga0097620_100019255
259 Ga0105244_10000035
260 Ga0105240_10000095
261 Ga0105240_10000155
262 Ga0105240_10001038
263 Ga0105240_10025491
264 Ga0111539_10007542
265 Ga0114129_10004138
266 Ga0105241_10002316
267 Ga0105237_10000061
268 Ga0105237_10001644
269 Ga0105237_10002264
270 Ga0105237_10005887
271 Ga0105238_10027837
272 Ga0105249_10005812
273 Ga0105249_10005821
274 Ga0105249_10006698
275 Ga0105249_10022441
276 Ga0105239_10000140
277 Ga0105239_10000614
278 Ga0105239_10004338
279 Ga0105239_10006659
280 Ga0157373_10013337
281 Ga0157374_10000004
282 Ga0157374_10008926
283 Ga0157378_10002976
284 Ga0163162_10001236
285 Ga0163162_10030556
286 Ga0157375_10013089
287 Ga0157380_10002419
288 Ga0157380_10007413
289 Ga0157380_10009721
290 Ga0157379_10027731
291 Ga0157376_10015695
292 Ga0182005_1000219
293 Ga0163161_10000007
294 Ga0163161_10015495
295 Ga0209436_102502
296 Ga0209258_100161
297 Ga0209646_1000004
298 Ga0209026_1000132
299 Ga0209148_1000161
300 Ga0209673_1000042
301 Ga0209130_1000735
302 Ga0209050_1000308
303 Ga0207426_1000034
304 Ga0207426_1000316
305 Ga0207426_1002967
306 Ga0209257_1000001
307 Ga0209257_1001059
308 Ga0207656_10000051
309 Ga0207655_1000008
310 Ga0207645_10010468
311 Ga0207654_10003651
312 Ga0207695_10000043
313 Ga0207695_10000165
314 Ga0207695_10005392
315 Ga0207695_10026153
316 Ga0207671_10001914
317 Ga0207671_10003616
318 Ga0207671_10005594
319 Ga0207671_10006116
320 Ga0207671_10010986
321 Ga0207659_10004097
322 Ga0207706_10010977
323 Ga0207670_10010424
324 Ga0207691_10023675
325 Ga0207689_10001842
326 Ga0207689_10002171
327 Ga0207689_10002652
328 Ga0207679_10001478
329 Ga0207712_10004343
330 Ga0207639_10015312
331 Ga0207641_10000391
332 Ga0207641_10000957
333 Ga0207648_10018900
334 Ga0207648_10021837
335 Ga0207676_10016643
336 Ga0207674_10003145
337 Ga0207674_10009489
338 Ga0207675_100001343
339 Ga0207698_10001741
340 Ga0207428_10023834
341 Ga0268266_10000105
342 Ga0268264_10000013
343 Ga0268264_10001952
344 Ga0268264_10004023
345 Ga0268264_10028205
346 Ga0268264_10041106
347 Ga0307515_10000684
348 Ga0307511_10000135
349 Ga0307408_100002868
350 Ga0307508_10000438
351 Ga0307516_10003195
352 Ga0307413_10005723
353 Ga0307410_10000075
354 Ga0307406_10000038
355 Ga0307414_10000001
356 Ga0307411_10000013
357 Ga0466972_0000047
358 Ga0466972_0002653
359 Ga0466957_0000205
360 Ga0495606_0021469
361 Ga0495633_0000296
362 Ga0495611_0000025
363 Ga0495687_000010
364 Ga0495686_0000086
365 Ga0495686_0008588
366 Ga0496121_0000028
367 Ga0501238_000035
368 Ga0501225_0000864
369 Ga0501241_000182
370 Ga0501266_000007
371 nmdc:mga0k408_15550_c1
372 nmdc:mga05p37_9986_c1
373 nmdc:mga08y16_10894_c1
374 Ga0500578_0000765
375 Ga0500644_0000227
376 Ga0500583_0001398
377 Ga0500641_0000006
378 Ga0500641_0000615
379 Ga0500658_0000013
380 Ga0500559_0005610
381 Ga0500577_0002562
382 Ga0500622_0001907
383 Ga0500622_0002044
384 Ga0500611_000013
385 2513235763
386 2644011516
387 2644369914
388 2644642241
389 2738725819
390 2738731896
391 2738764461
392 2739213476
393 2740000742
394 2740005558
395 2819572960
396 2821139621
397 2857614497
398 2857619126
399 2904419784
400 2904471743
401 2904556572
402 2919193022
403 2929153001
404 2929179395
405 2929245629
406 2929922260
407 2945981803
408 2946018796
409 8003154785
410 8054308269

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

60

142

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.891 34 116
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8508 34 116
1qmu-assembly1.cif.gz_A duck carboxypeptidase d domain ii 0.8494 34 116
6fwv-assembly2.cif.gz_B the bacillus anthracis tie protein 0.8406 31 116
6fwv-assembly1.cif.gz_A the bacillus anthracis tie protein 0.8405 31 116
ID Description Score Start End Superfamily
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8859 34 116 2.60.40.1120
af_E7FFQ7_1118_1203_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8589 35 121 2.60.40.1120
af_P0CG96_23_100_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8568 35 115 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8556 34 116 2.60.40.1120
af_Q54I77_467_541_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8553 35 115 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A660XX46-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9395 29 116
AF-X1ELE3-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.916 29 116 GO:0030246
AF-A0A090WSJ3-F1-model_v4 Oar protein 0.8956 579 1026 GO:0009279
GO:0015344
AF-A0A2G9Z069-F1-model_v4 Uncharacterized protein 0.8927 24 116 GO:0016020
AF-A0A524NZB5-F1-model_v4 TonB-dependent receptor 0.8867 371 1081 GO:0009279
GO:0015344

Map