F314508

General Info

Members Datasets Scaffolds Average Seq Length
205 149 199 254

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857542790|2857546219
Length 284
Sequence TASALSASSSRSAATQRPADSDAAAAPDASPASTAPTLDINCDMGESFGAFVMGNDLEVLAHVTSANIACGMHAGDPGVMHRTVAAAVERGVAVGAHPGLPDLQGFGRRVMALSPAEVYDLTVYQIGALWAFTRAAGTSLHHVKAHGALYNMTAKDPAIADAVARATRDVDPSLIIYVATSTMADAATALSLPVAYEVFADRTYQDDATLTPRSQADAMIEDPDLSIAQVKGMVVGGYVTSQTGKRVPVRADTLCIHGDQPGAALFARRIREALTHDGIRIATI

Samples

Sample ID Description Type Environment
1 2855730933 Achromobacter sp. HZ28 Isolate Nodule
2 2855767633 Achromobacter sp. HZ34 Isolate Nodule
3 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
4 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
5 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
6 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
104 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
105 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
109 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
110 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
111 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
112 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
115 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
120 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
127 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
138 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
139 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
140 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
146 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
147 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.07
Metatranscriptomes 0
Isolates 2.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.27
Nodule 0.98
Rhizoplane 0.98
Rhizosphere 81.95
Stem 0
Stem Tuber 0
Unclassified 6.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10079052 3300003316 Bacteria 3772
2 rootL2_10019286 3300003322 Bacteria 4143
3 Ga0070658_10017209 3300005327 Bacteria 5785
4 Ga0070670_100482898 3300005331 Bacteria 1100
5 Ga0070670_100586425 3300005331 Bacteria 997
6 Ga0068869_100290259 3300005334 Bacteria 1318
7 Ga0070666_10077960 3300005335 Bacteria 2261
8 Ga0070661_100040573 3300005344 Bacteria 3396
9 Ga0070661_100273976 3300005344 Bacteria 1307
10 Ga0070668_100008206 3300005347 Bacteria 7754
11 Ga0070673_100462859 3300005364 Bacteria 1142
12 Ga0070659_100233046 3300005366 Bacteria 1522
13 Ga0070667_100000084 3300005367 Bacteria 118027
14 Ga0070667_100035217 3300005367 Bacteria 4193
15 Ga0070667_100060560 3300005367 Bacteria 3203
16 Ga0070667_100156122 3300005367 Bacteria 2007
17 Ga0070667_100350976 3300005367 Bacteria 1335
18 Ga0070709_10537193 3300005434 Bacteria 893
19 Ga0070708_100512472 3300005445 Bacteria 1131
20 Ga0070663_100000689 3300005455 Bacteria 18179
21 Ga0070662_100138596 3300005457 Bacteria 1883
22 Ga0070706_100011570 3300005467 Bacteria 8197
23 Ga0070707_100269633 3300005468 Bacteria 1655
24 Ga0070679_100119194 3300005530 Bacteria 2624
25 Ga0068853_100008030 3300005539 Bacteria 8465
26 Ga0068853_100014548 3300005539 Bacteria 6449
27 Ga0068853_100021406 3300005539 Bacteria 5391
28 Ga0068853_100083718 3300005539 Bacteria 2795
29 Ga0068853_100543536 3300005539 Bacteria 1100
30 Ga0070665_100002001 3300005548 Bacteria 22931
31 Ga0070665_100041999 3300005548 Bacteria 4597
32 Ga0070665_100075874 3300005548 Bacteria 3369
33 Ga0068855_100003763 3300005563 Bacteria 18547
34 Ga0068855_100007123 3300005563 Bacteria 13565
35 Ga0068855_100194612 3300005563 Bacteria 2285
36 Ga0068855_100309248 3300005563 Bacteria 1749
37 Ga0070664_100328502 3300005564 Bacteria 1387
38 Ga0068857_100118962 3300005577 Bacteria 2378
39 Ga0068856_100012869 3300005614 Bacteria 8098
40 Ga0068852_100127503 3300005616 Bacteria 2339
41 Ga0068852_100145313 3300005616 Bacteria 2199
42 Ga0068859_100000125 3300005617 Bacteria 72938
43 Ga0068864_100038575 3300005618 Bacteria 4080
44 Ga0068864_100100364 3300005618 Bacteria 2565
45 Ga0068864_100127600 3300005618 Bacteria 2281
46 Ga0068851_10027756 3300005834 Bacteria 2791
47 Ga0068851_10060874 3300005834 Bacteria 1934
48 Ga0068863_100060817 3300005841 Bacteria 3572
49 Ga0068863_100159549 3300005841 Bacteria 2160
50 Ga0068863_100193999 3300005841 Bacteria 1952
51 Ga0068862_100001848 3300005844 Bacteria 19196
52 Ga0081455_10276612 3300005937 Bacteria 1215
53 Ga0075364_10023329 3300006051 Bacteria 3917
54 Ga0075364_10028830 3300006051 Bacteria 3556
55 Ga0070712_100735699 3300006175 Bacteria 843
56 Ga0075367_10005377 3300006178 Bacteria 6351
57 Ga0075366_10002449 3300006195 Bacteria 9501
58 Ga0075366_10033165 3300006195 Bacteria 3041
59 Ga0075370_10000789 3300006353 Bacteria 12656
60 Ga0075370_10021000 3300006353 Bacteria 3575
61 Ga0068871_100029940 3300006358 Bacteria 4281
62 Ga0097620_100000125 3300006931 Bacteria 72938
63 Ga0099794_10082944 3300007265 Bacteria 1583
64 Ga0105240_10014020 3300009093 Bacteria 10964
65 Ga0111539_10471982 3300009094 Bacteria 1461
66 Ga0105245_10283983 3300009098 Bacteria 1619
67 Ga0114129_10246071 3300009147 Bacteria 2402
68 Ga0105241_10008230 3300009174 Bacteria 7679
69 Ga0105242_10153611 3300009176 Bacteria 2009
70 Ga0105248_10000429 3300009177 Bacteria 47562
71 Ga0105237_10000388 3300009545 Bacteria 62620
72 Ga0105237_10003573 3300009545 Bacteria 18410
73 Ga0105238_10002402 3300009551 Bacteria 18777
74 Ga0105238_10123693 3300009551 Bacteria 2566
75 Ga0105238_10187787 3300009551 Bacteria 2043
76 Ga0105249_10000170 3300009553 Bacteria 76693
77 Ga0105249_10924217 3300009553 Bacteria 940
78 Ga0105239_10004116 3300010375 Bacteria 17479
79 Ga0105239_10015522 3300010375 Bacteria 8434
80 Ga0157371_10010476 3300013102 Bacteria 7217
81 Ga0157370_10077585 3300013104 Bacteria 3129
82 Ga0157369_10001162 3300013105 Bacteria 32848
83 Ga0157369_10872130 3300013105 Bacteria 924
84 Ga0157374_10154869 3300013296 Bacteria 2230
85 Ga0157374_10286645 3300013296 Bacteria 1627
86 Ga0157378_10000130 3300013297 Bacteria 72949
87 Ga0157372_10002301 3300013307 Bacteria 20714
88 Ga0157379_10670840 3300014968 Bacteria 972
89 Ga0209025_1000018 3300025294 Bacteria 686898
90 Ga0207656_10003440 3300025321 Bacteria 5441
91 Ga0207680_10008668 3300025903 Bacteria 5005
92 Ga0207645_10013038 3300025907 Bacteria 5616
93 Ga0207705_10068559 3300025909 Bacteria 2568
94 Ga0207684_10011585 3300025910 Bacteria 7706
95 Ga0207654_10009476 3300025911 Bacteria 4946
96 Ga0207695_10001009 3300025913 Bacteria 49724
97 Ga0207671_10012714 3300025914 Bacteria 6751
98 Ga0207657_10267707 3300025919 Bacteria 1359
99 Ga0207649_10002383 3300025920 Bacteria 10544
100 Ga0207681_10380083 3300025923 Bacteria 1137
101 Ga0207694_10035093 3300025924 Bacteria 3846
102 Ga0207650_10160157 3300025925 Bacteria 1783
103 Ga0207650_10291657 3300025925 Bacteria 1330
104 Ga0207644_10353852 3300025931 Bacteria 1193
105 Ga0207690_10200164 3300025932 Bacteria 1516
106 Ga0207706_10216755 3300025933 Bacteria 1677
107 Ga0207706_10299663 3300025933 Bacteria 1401
108 Ga0207704_10623492 3300025938 Bacteria 885
109 Ga0207691_10260203 3300025940 Bacteria 1496
110 Ga0207711_10001386 3300025941 Bacteria 22811
111 Ga0207679_10077718 3300025945 Bacteria 2526
112 Ga0207667_10004923 3300025949 Bacteria 16313
113 Ga0207667_10020459 3300025949 Bacteria 7359
114 Ga0207667_10493995 3300025949 Bacteria 1242
115 Ga0207712_10000264 3300025961 Bacteria 50896
116 Ga0207668_10118595 3300025972 Bacteria 1999
117 Ga0207668_10437787 3300025972 Bacteria 1113
118 Ga0207640_10015635 3300025981 Bacteria 4397
119 Ga0207658_10000214 3300025986 Bacteria 60680
120 Ga0207658_10015651 3300025986 Bacteria 5207
121 Ga0207658_10123517 3300025986 Bacteria 2068
122 Ga0207658_10126689 3300025986 Bacteria 2045
123 Ga0207658_10279698 3300025986 Bacteria 1430
124 Ga0207677_10624497 3300026023 Bacteria 948
125 Ga0207703_10033965 3300026035 Bacteria 4046
126 Ga0207639_10006224 3300026041 Bacteria 8105
127 Ga0207639_10020755 3300026041 Bacteria 4707
128 Ga0207639_10360224 3300026041 Bacteria 1301
129 Ga0207639_10513764 3300026041 Bacteria 1096
130 Ga0207639_10578427 3300026041 Bacteria 1034
131 Ga0207639_10651319 3300026041 Bacteria 974
132 Ga0207678_10000288 3300026067 Bacteria 45700
133 Ga0207678_10062755 3300026067 Bacteria 3193
134 Ga0207678_10082379 3300026067 Bacteria 2753
135 Ga0207678_10588136 3300026067 Bacteria 975
136 Ga0207702_10006943 3300026078 Bacteria 9697
137 Ga0207641_10700199 3300026088 Bacteria 997
138 Ga0207641_10736869 3300026088 Bacteria 972
139 Ga0207674_10071142 3300026116 Bacteria 3495
140 Ga0207683_10635279 3300026121 Bacteria 989
141 Ga0207698_10017207 3300026142 Bacteria 4898
142 Ga0268266_10194021 3300028379 Bacteria 1855
143 Ga0268266_10422575 3300028379 Bacteria 1263
144 Ga0268265_10000664 3300028380 Bacteria 34105
145 Ga0268264_10057923 3300028381 Bacteria 3242
146 Ga0307515_10202608 3300028794 Bacteria 1855
147 Ga0307514_10256705 3300031649 Bacteria 1028
148 Ga0316575_10096457 3300031665 Bacteria 1200
149 Ga0316579_10002937 3300031691 Bacteria 6546
150 Ga0316578_10018176 3300031728 Bacteria 3846
151 Ga0307516_10377686 3300031730 Bacteria 1079
152 Ga0316583_10012156 3300032133 Bacteria 3106
153 Ga0451793_1091684 3300041452 Bacteria 2985
154 Ga0451807_1818940 3300041486 Bacteria 1099
155 Ga0451849_1404347 3300041505 Bacteria 1083
156 Ga0451853_0049782 3300041512 Bacteria 2090
157 Ga0466972_0053075 3300044658 Bacteria 1952
158 Ga0466963_0453583 3300044694 Bacteria 905
159 Ga0466970_0007413 3300044765 Bacteria 5495
160 Ga0466959_0004522 3300045049 Bacteria 9330
161 Ga0495607_0000871 3300046501 Bacteria 28299
162 Ga0495610_0000047 3300046512 Bacteria 151516
163 Ga0495637_0037577 3300046520 Bacteria 2101
164 Ga0495647_0109909 3300046681 Bacteria 1150
165 Ga0495658_0003646 3300046683 Bacteria 7620
166 Ga0495649_0075205 3300046694 Bacteria 1809
167 Ga0495686_0003583 3300047472 Bacteria 13329
168 Ga0495626_0099488 3300048091 Bacteria 1269
169 Ga0496121_0017759 3300048924 Bacteria 7235
170 Ga0496122_0000440 3300048925 Bacteria 87364
171 Ga0496123_0000407 3300048926 Bacteria 78763
172 Ga0496124_0000004 3300048927 Bacteria 976131
173 Ga0496126_0282442 3300048929 Bacteria 1375
174 Ga0501033_0182910 3300049570 Bacteria 1502
175 Ga0501036_0345852 3300049572 Bacteria 1242
176 Ga0501036_0416137 3300049572 Bacteria 1121
177 Ga0501047_0068821 3300049581 Bacteria 3410
178 Ga0501047_0142046 3300049581 Bacteria 2279
179 Ga0501047_0190537 3300049581 Bacteria 1914
180 Ga0501069_0002506 3300049585 Bacteria 9376
181 Ga0501074_0268893 3300049590 Bacteria 1212
182 Ga0501080_1124298 3300049742 Bacteria 677
183 Ga0501044_0143347 3300049823 Bacteria 2377
184 Ga0501044_0244316 3300049823 Bacteria 1738
185 nmdc:mga00v17_27666_c1 3300050491 Bacteria 3313
186 nmdc:mga00v17_6686_c1 3300050491 Bacteria 6126
187 nmdc:mga0k408_426_c1 3300050493 Bacteria 13724
188 nmdc:mga0k408_63180_c1 3300050493 Bacteria 2154
189 nmdc:mga06z11_137026_c1 3300050494 Bacteria 1380
190 nmdc:mga07m45_4021_c1 3300050496 Bacteria 7160
191 nmdc:mga09592_191149_c1 3300050508 Bacteria 1772
192 nmdc:mga08y16_299019_c1 3300050511 Bacteria 1659
193 Ga0500643_017230 3300053087 Bacteria 2424
194 Ga0500651_0039866 3300053093 Bacteria 2958
195 Ga0500597_000235 3300053120 Bacteria 11337
196 Ga0500568_0010867 3300053139 Bacteria 4245
197 Ga0500636_0273820 3300053177 Bacteria 847
198 Ga0501084_0221100 3300054114 Bacteria 1598
199 Ga0501082_0001331 3300060353 Bacteria 21648

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005841 Ga0068863_100060817 Ga0068863_1000608172 173
2 3300009553 Ga0105249_10924217 Ga0105249_109242172 173
3 3300049590 Ga0501074_0268893 Ga0501074_0268893_63_698 190
4 3300049742 Ga0501080_1124298 Ga0501080_1124298_19_654 190
5 3300054114 Ga0501084_0221100 Ga0501084_0221100_34_669 190
6 3300009176 Ga0105242_10153611 Ga0105242_101536112 193
7 3300009098 Ga0105245_10283983 Ga0105245_102839832 194
8 3300005834 Ga0068851_10060874 Ga0068851_100608743 195
9 3300005539 Ga0068853_100014548 Ga0068853_1000145482 196
10 3300026041 Ga0207639_10020755 Ga0207639_100207555 196
11 3300013296 Ga0157374_10286645 Ga0157374_102866452 197
12 3300041452 Ga0451793_1091684 Ga0451793_1091684_40_726 197
13 3300031730 Ga0307516_10377686 Ga0307516_103776862 200
14 3300005331 Ga0070670_100586425 Ga0070670_1005864251 202
15 3300046683 Ga0495658_0003646 Ga0495658_0003646_3005_3712 202
16 3300005618 Ga0068864_100100364 Ga0068864_1001003643 203
17 3300013307 Ga0157372_10002301 Ga0157372_1000230111 207
18 3300026041 Ga0207639_10578427 Ga0207639_105784271 207
19 3300026142 Ga0207698_10017207 Ga0207698_100172074 207
20 3300048924 Ga0496121_0017759 Ga0496121_0017759_134_859 208
21 3300048927 Ga0496124_0000004 Ga0496124_0000004_715105_715830 208
22 3300006175 Ga0070712_100735699 Ga0070712_1007356991 209
23 3300053177 Ga0500636_0273820 Ga0500636_0273820_16_747 209
24 3300006051 Ga0075364_10023329 Ga0075364_100233295 213
25 3300050491 nmdc:mga00v17_6686_c1 nmdc:mga00v17_6686_c1_1384_2136 213
26 iso_pu_bacteria 2855730933 2855731657 213
27 iso_pu_bacteria 2855767633 2855768363 213
28 3300006353 Ga0075370_10000789 Ga0075370_1000078911 214
29 3300050496 nmdc:mga07m45_4021_c1 nmdc:mga07m45_4021_c1_1800_2543 214
30 iso_pu_bacteria 3006984091 3006987565 214
31 3300005548 Ga0070665_100041999 Ga0070665_1000419992 215
32 3300025986 Ga0207658_10123517 Ga0207658_101235172 215
33 3300028379 Ga0268266_10194021 Ga0268266_101940212 215
34 3300005434 Ga0070709_10537193 Ga0070709_105371932 217
35 3300005937 Ga0081455_10276612 Ga0081455_102766122 217
36 3300006051 Ga0075364_10028830 Ga0075364_100288303 217
37 3300025294 Ga0209025_1000018 Ga0209025_1000018282 217
38 3300025923 Ga0207681_10380083 Ga0207681_103800832 217
39 3300025925 Ga0207650_10160157 Ga0207650_101601573 217
40 3300049570 Ga0501033_0182910 Ga0501033_0182910_171_932 217
41 3300049581 Ga0501047_0142046 Ga0501047_0142046_918_1679 217
42 3300050491 nmdc:mga00v17_27666_c1 nmdc:mga00v17_27666_c1_1201_1953 217
43 iso_pu_bacteria 2857542790 2857546219 217
44 iso_pu_bacteria 2895395659 2895398833 217
45 iso_pu_bacteria 3006988479 3006991790 217
46 3300005457 Ga0070662_100138596 Ga0070662_1001385962 218
47 3300005468 Ga0070707_100269633 Ga0070707_1002696332 218
48 3300005563 Ga0068855_100309248 Ga0068855_1003092482 218
49 3300007265 Ga0099794_10082944 Ga0099794_100829442 218
50 3300009147 Ga0114129_10246071 Ga0114129_102460713 218
51 3300013297 Ga0157378_10000130 Ga0157378_1000013066 218
52 3300025903 Ga0207680_10008668 Ga0207680_100086682 218
53 3300025933 Ga0207706_10216755 Ga0207706_102167552 218
54 3300025949 Ga0207667_10493995 Ga0207667_104939952 218
55 3300031665 Ga0316575_10096457 Ga0316575_100964572 218
56 3300031691 Ga0316579_10002937 Ga0316579_100029372 218
57 3300031728 Ga0316578_10018176 Ga0316578_100181762 218
58 3300032133 Ga0316583_10012156 Ga0316583_100121562 218
59 3300041486 Ga0451807_1818940 Ga0451807_1818940_151_906 218
60 3300050508 nmdc:mga09592_191149_c1 nmdc:mga09592_191149_c1_737_1507 218
61 3300005367 Ga0070667_100156122 Ga0070667_1001561222 219
62 3300025986 Ga0207658_10126689 Ga0207658_101266892 219
63 3300026088 Ga0207641_10736869 Ga0207641_107368691 219
64 3300049572 Ga0501036_0345852 Ga0501036_0345852_362_1120 219
65 3300049572 Ga0501036_0416137 Ga0501036_0416137_158_916 219
66 3300046512 Ga0495610_0000047 Ga0495610_0000047_7211_7972 220
67 3300046520 Ga0495637_0037577 Ga0495637_0037577_668_1429 220
68 3300046681 Ga0495647_0109909 Ga0495647_0109909_127_927 220
69 3300046694 Ga0495649_0075205 Ga0495649_0075205_687_1472 220
70 3300005331 Ga0070670_100482898 Ga0070670_1004828982 221
71 3300005335 Ga0070666_10077960 Ga0070666_100779602 221
72 3300005344 Ga0070661_100040573 Ga0070661_1000405735 221
73 3300005344 Ga0070661_100273976 Ga0070661_1002739762 221
74 3300005367 Ga0070667_100350976 Ga0070667_1003509762 221
75 3300005530 Ga0070679_100119194 Ga0070679_1001191942 221
76 3300005539 Ga0068853_100021406 Ga0068853_1000214064 221
77 3300005539 Ga0068853_100083718 Ga0068853_1000837184 221
78 3300005563 Ga0068855_100003763 Ga0068855_1000037632 221
79 3300005563 Ga0068855_100194612 Ga0068855_1001946122 221
80 3300005564 Ga0070664_100328502 Ga0070664_1003285022 221
81 3300005577 Ga0068857_100118962 Ga0068857_1001189623 221
82 3300005614 Ga0068856_100012869 Ga0068856_1000128693 221
83 3300005616 Ga0068852_100145313 Ga0068852_1001453132 221
84 3300005618 Ga0068864_100038575 Ga0068864_1000385752 221
85 3300005618 Ga0068864_100127600 Ga0068864_1001276003 221
86 3300005834 Ga0068851_10027756 Ga0068851_100277563 221
87 3300005841 Ga0068863_100193999 Ga0068863_1001939992 221
88 3300006358 Ga0068871_100029940 Ga0068871_1000299405 221
89 3300009093 Ga0105240_10014020 Ga0105240_100140204 221
90 3300009174 Ga0105241_10008230 Ga0105241_100082306 221
91 3300009545 Ga0105237_10003573 Ga0105237_100035732 221
92 3300009551 Ga0105238_10002402 Ga0105238_100024022 221
93 3300009551 Ga0105238_10123693 Ga0105238_101236933 221
94 3300009551 Ga0105238_10187787 Ga0105238_101877873 221
95 3300010375 Ga0105239_10015522 Ga0105239_100155225 221
96 3300013102 Ga0157371_10010476 Ga0157371_100104768 221
97 3300013104 Ga0157370_10077585 Ga0157370_100775852 221
98 3300013105 Ga0157369_10001162 Ga0157369_1000116213 221
99 3300013105 Ga0157369_10872130 Ga0157369_108721302 221
100 3300013296 Ga0157374_10154869 Ga0157374_101548692 221
101 3300014968 Ga0157379_10670840 Ga0157379_106708402 221
102 3300025321 Ga0207656_10003440 Ga0207656_100034403 221
103 3300025911 Ga0207654_10009476 Ga0207654_100094764 221
104 3300025913 Ga0207695_10001009 Ga0207695_1000100932 221
105 3300025920 Ga0207649_10002383 Ga0207649_100023837 221
106 3300025924 Ga0207694_10035093 Ga0207694_100350932 221
107 3300025925 Ga0207650_10291657 Ga0207650_102916572 221
108 3300025931 Ga0207644_10353852 Ga0207644_103538522 221
109 3300025945 Ga0207679_10077718 Ga0207679_100777182 221
110 3300025949 Ga0207667_10004923 Ga0207667_100049232 221
111 3300025981 Ga0207640_10015635 Ga0207640_100156352 221
112 3300026023 Ga0207677_10624497 Ga0207677_106244971 221
113 3300026041 Ga0207639_10360224 Ga0207639_103602242 221
114 3300026041 Ga0207639_10513764 Ga0207639_105137642 221
115 3300026041 Ga0207639_10651319 Ga0207639_106513192 221
116 3300026067 Ga0207678_10062755 Ga0207678_100627551 221
117 3300026067 Ga0207678_10588136 Ga0207678_105881362 221
118 3300026078 Ga0207702_10006943 Ga0207702_100069434 221
119 3300026088 Ga0207641_10700199 Ga0207641_107001991 221
120 3300026116 Ga0207674_10071142 Ga0207674_100711422 221
121 3300044694 Ga0466963_0453583 Ga0466963_0453583_54_821 221
122 3300048929 Ga0496126_0282442 Ga0496126_0282442_115_885 221
123 3300049581 Ga0501047_0068821 Ga0501047_0068821_1283_2053 221
124 3300049581 Ga0501047_0190537 Ga0501047_0190537_284_1057 221
125 3300049823 Ga0501044_0143347 Ga0501044_0143347_998_1771 221
126 3300049823 Ga0501044_0244316 Ga0501044_0244316_852_1622 221
127 3300053139 Ga0500568_0010867 Ga0500568_0010867_3027_3800 221
128 3300060353 Ga0501082_0001331 Ga0501082_0001331_9354_10127 221
129 3300005327 Ga0070658_10017209 Ga0070658_100172097 222
130 3300005334 Ga0068869_100290259 Ga0068869_1002902592 222
131 3300005347 Ga0070668_100008206 Ga0070668_1000082065 222
132 3300005364 Ga0070673_100462859 Ga0070673_1004628592 222
133 3300005366 Ga0070659_100233046 Ga0070659_1002330462 222
134 3300005367 Ga0070667_100000084 Ga0070667_10000008473 222
135 3300005367 Ga0070667_100035217 Ga0070667_1000352174 222
136 3300005367 Ga0070667_100060560 Ga0070667_1000605602 222
137 3300005455 Ga0070663_100000689 Ga0070663_1000006893 222
138 3300005539 Ga0068853_100008030 Ga0068853_1000080309 222
139 3300005539 Ga0068853_100543536 Ga0068853_1005435362 222
140 3300005548 Ga0070665_100002001 Ga0070665_1000020016 222
141 3300005548 Ga0070665_100075874 Ga0070665_1000758742 222
142 3300005563 Ga0068855_100007123 Ga0068855_1000071237 222
143 3300005616 Ga0068852_100127503 Ga0068852_1001275032 222
144 3300005617 Ga0068859_100000125 Ga0068859_10000012536 222
145 3300005841 Ga0068863_100159549 Ga0068863_1001595492 222
146 3300005844 Ga0068862_100001848 Ga0068862_10000184813 222
147 3300006931 Ga0097620_100000125 Ga0097620_10000012536 222
148 3300009177 Ga0105248_10000429 Ga0105248_1000042945 222
149 3300009545 Ga0105237_10000388 Ga0105237_1000038849 222
150 3300009553 Ga0105249_10000170 Ga0105249_1000017053 222
151 3300010375 Ga0105239_10004116 Ga0105239_1000411614 222
152 3300025907 Ga0207645_10013038 Ga0207645_100130382 222
153 3300025909 Ga0207705_10068559 Ga0207705_100685592 222
154 3300025914 Ga0207671_10012714 Ga0207671_100127146 222
155 3300025919 Ga0207657_10267707 Ga0207657_102677072 222
156 3300025932 Ga0207690_10200164 Ga0207690_102001642 222
157 3300025933 Ga0207706_10299663 Ga0207706_102996632 222
158 3300025938 Ga0207704_10623492 Ga0207704_106234922 222
159 3300025940 Ga0207691_10260203 Ga0207691_102602032 222
160 3300025941 Ga0207711_10001386 Ga0207711_100013868 222
161 3300025949 Ga0207667_10020459 Ga0207667_100204595 222
162 3300025961 Ga0207712_10000264 Ga0207712_1000026427 222
163 3300025972 Ga0207668_10118595 Ga0207668_101185953 222
164 3300025972 Ga0207668_10437787 Ga0207668_104377872 222
165 3300025986 Ga0207658_10000214 Ga0207658_1000021430 222
166 3300025986 Ga0207658_10015651 Ga0207658_100156515 222
167 3300025986 Ga0207658_10279698 Ga0207658_102796982 222
168 3300026035 Ga0207703_10033965 Ga0207703_100339653 222
169 3300026041 Ga0207639_10006224 Ga0207639_100062243 222
170 3300026067 Ga0207678_10000288 Ga0207678_1000028836 222
171 3300026067 Ga0207678_10082379 Ga0207678_100823793 222
172 3300026121 Ga0207683_10635279 Ga0207683_106352791 222
173 3300028379 Ga0268266_10422575 Ga0268266_104225752 222
174 3300028380 Ga0268265_10000664 Ga0268265_1000066412 222
175 3300028381 Ga0268264_10057923 Ga0268264_100579233 222
176 3300041505 Ga0451849_1404347 Ga0451849_1404347_241_1017 222
177 3300041512 Ga0451853_0049782 Ga0451853_0049782_1201_1977 222
178 3300044658 Ga0466972_0053075 Ga0466972_0053075_329_1105 222
179 3300044765 Ga0466970_0007413 Ga0466970_0007413_3824_4600 222
180 3300045049 Ga0466959_0004522 Ga0466959_0004522_2628_3404 222
181 3300046501 Ga0495607_0000871 Ga0495607_0000871_8983_9762 222
182 3300047472 Ga0495686_0003583 Ga0495686_0003583_5488_6297 222
183 3300048925 Ga0496122_0000440 Ga0496122_0000440_14015_14818 222
184 3300048926 Ga0496123_0000407 Ga0496123_0000407_14055_14858 222
185 3300049585 Ga0501069_0002506 Ga0501069_0002506_2097_2864 222
186 3300053087 Ga0500643_017230 Ga0500643_017230_970_1779 222
187 3300053093 Ga0500651_0039866 Ga0500651_0039866_1471_2247 222
188 3300053120 Ga0500597_000235 Ga0500597_000235_6155_6964 222
189 3300003316 rootH1_10079052 rootH1_100790525 223
190 3300003322 rootL2_10019286 rootL2_100192864 223
191 3300005445 Ga0070708_100512472 Ga0070708_1005124722 223
192 3300005467 Ga0070706_100011570 Ga0070706_1000115705 223
193 3300006178 Ga0075367_10005377 Ga0075367_100053773 223
194 3300006195 Ga0075366_10002449 Ga0075366_100024492 223
195 3300006195 Ga0075366_10033165 Ga0075366_100331651 223
196 3300006353 Ga0075370_10021000 Ga0075370_100210004 223
197 3300009094 Ga0111539_10471982 Ga0111539_104719822 223
198 3300025910 Ga0207684_10011585 Ga0207684_100115857 223
199 3300028794 Ga0307515_10202608 Ga0307515_102026081 223
200 3300031649 Ga0307514_10256705 Ga0307514_102567051 223
201 3300048091 Ga0495626_0099488 Ga0495626_0099488_249_1019 223
202 3300050493 nmdc:mga0k408_426_c1 nmdc:mga0k408_426_c1_2113_2883 223
203 3300050493 nmdc:mga0k408_63180_c1 nmdc:mga0k408_63180_c1_489_1259 223
204 3300050494 nmdc:mga06z11_137026_c1 nmdc:mga06z11_137026_c1_262_1032 223
205 3300050511 nmdc:mga08y16_299019_c1 nmdc:mga08y16_299019_c1_166_936 223

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03746

LamB_YcsF

LamB/YcsF family

38

275

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dfa-assembly1.cif.gz_A crystal structure of lactam utilization protein from thermus thermophilus hb8 0.901 3 217
1v6t-assembly1.cif.gz_A crystal structure of lactam utilization protein from pyrococcus horikoshii ot3 0.8914 3 216
2dfa-assembly1.cif.gz_A crystal structure of lactam utilization protein from thermus thermophilus hb8 0.8663 3 217
1v6t-assembly1.cif.gz_A crystal structure of lactam utilization protein from pyrococcus horikoshii ot3 0.8531 3 216
2xu2-assembly1.cif.gz_A crystal structure of the hypothetical protein pa4511 from pseudomonas aeruginosa 0.8455 3 206
ID Description Score Start End Superfamily
af_Q2FXX2_1_250_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9275 3 218 3.20.20.370
2dfaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.901 3 217 3.20.20.370
af_Q2FXX2_1_250_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.8952 3 218 3.20.20.370
1v6tA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.8914 3 216 3.20.20.370
af_Q54NF6_153_360_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8676 90 130 3.40.50.150
ID Description Score Start End GO Terms
AF-T1AZS8-F1-model_v4 LamB/YcsF 0.9874 63 132 GO:0005975
AF-A0A2V6EU26-F1-model_v4 LamB/YcsF family protein 0.9613 107 219 GO:0005975
AF-Q7P4D8-F1-model_v4 Lactam utilization protein LAMB 0.9598 89 217 GO:0005975
AF-A0A6L7EBD4-F1-model_v4 deleted 0.9595 100 217
AF-A0A5P0JK03-F1-model_v4 LamB/YcsF family protein 0.9593 80 190 GO:0005975

Feature Viewer

pLDDT pTM Quality
87.53 0.85 High
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Predicted Structure (AlphaFold2)

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