F314510

General Info

Members Datasets Scaffolds Average Seq Length
205 149 185 780

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2881101125|2881102899
Length 827
Sequence DKDFDAASGGGPGGAADAGERNLAPATQSPHAPAQAMPAVGSSRIHESARAQVAGRATYIDDIPELRGTLHAAPILSPVAHGSLRGVDAQPALALPGVRGVVLAADIPGDPVLATFVHDEPIFARDSVQHVGQVIGLVVADSVQSARRAARLVKLDIEALPAVLDVRAAHAAQSYVLPPVVVRRGEPEAALTASAHRLQGQLEVGGQEHFYLEGQVAYAIPREQGQWHIHSSTQHPGEVQHWVAHALGLENNAVTVECRRMGGGFGGKETQAGHMAVWAALAARKLGRPVKLRLDRDDDFMITGKRHPFAYDWQVGFDDSGRITALKLDMLANCGFSADLSGPVADRAIFHTDNAYFLSDVEIASYRCKTNVQSHTAFRGFGGPQGVIAIEAILGDIARHLRLDPLQVRLRNLYSEEVVQSPSTGSGRTDVASLQAVPTPTVRAEPVEAPRRNTTHYQMKVEDNILEPLISELAKTSRYEERRARIARWNAQSPVIKRGIALTPVKFGISFTATFFNQAGALVHVFTDGSVQLNHGGTEMGQGLHTKIMQVVADELGVPFERVRCTATETGKVPNASATAASSGTDLNGRAAQFAARNIRDNLAAFVAGLDGCGAGAVRLRAGEVISPTCTRSFDEVVRLAYANRIQLWSDGFYRTPKIHYDKVTLTGRPFYYFSYGAACSEVAIDTLTGESRVLAVDILHDVGTSINPAIDIGQIEGGFVQGMGWLTTEQLVWTADGKLATHAPSTYKIPATGDIPEHFTVALWPEPNREDNVGGSKAVGEPPFMLGISVWEAIRDAVASAGAPQNASRLVAPATPENVLRALGGV

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2547132374 Acidovorax radicis N35 Isolate Unclassified
3 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
4 2643221570 Acidovorax sp. Root568 Isolate Unclassified
5 2643221596 Acidovorax sp. Root70 Isolate Unclassified
6 2643221609 Acidovorax sp. Root217 Isolate Unclassified
7 2643221611 Acidovorax sp. Root219 Isolate Unclassified
8 2643221652 Acidovorax sp. Root402 Isolate Unclassified
9 2643221717 Acidovorax sp. Root267 Isolate Unclassified
10 2738543012 Acidovorax sp. CF301 Isolate Unclassified
11 2816332133 Acidovorax radicis 2721A Isolate Unclassified
12 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
13 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
14 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
15 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
16 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
17 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
18 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
19 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
20 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
21 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
22 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
23 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
24 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
25 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
26 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
27 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
28 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
29 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
30 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
33 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
34 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
35 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
37 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
38 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
39 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
40 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
41 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
42 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
43 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
44 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
45 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
46 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
47 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
48 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
49 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
50 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
51 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
52 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
53 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
54 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
57 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
58 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
59 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
60 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
61 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
74 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
75 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
76 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
77 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
78 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
79 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
90 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
116 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
117 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
118 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
119 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
120 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
121 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
122 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
123 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
130 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
133 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
134 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
135 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
136 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
140 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
147 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.24
Metatranscriptomes 0
Isolates 9.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.41
Nodule 0.49
Rhizoplane 0.49
Rhizosphere 60.49
Stem 0
Stem Tuber 0
Unclassified 15.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000005 3300002704 Bacteria 261712
2 JGI25156J39149_1000006 3300002705 Bacteria 261778
3 JGI25154J39366_1000015 3300002738 Bacteria 261778
4 JGI25157J39369_1000016 3300002741 Bacteria 192349
5 JGI25159J45721_1000256 3300002987 Bacteria 24850
6 JGI25151J46595_10005768 3300003187 Bacteria 6343
7 JGI25160J50197_1000098 3300003354 Bacteria 87307
8 JGI25161J50226_1000037 3300003374 Bacteria 133331
9 Ga0055526_1003256 3300003771 Bacteria 10447
10 Ga0055537_1000165 3300003773 Bacteria 49269
11 Ga0055524_1000261 3300003775 Bacteria 53201
12 Ga0055536_1002347 3300003781 Bacteria 10720
13 Ga0055534_1001463 3300003784 Bacteria 9402
14 Ga0055528_1000723 3300003790 Bacteria 23348
15 Ga0055530_10000190 3300003791 Bacteria 55126
16 Ga0055540_1000187 3300003792 Bacteria 59910
17 Ga0055540_1001526 3300003792 Bacteria 13633
18 Ga0055531_10001358 3300003794 Bacteria 18196
19 Ga0055531_10001522 3300003794 Bacteria 16989
20 Ga0055543_1000482 3300004625 Bacteria 23366
21 Ga0065165_1006785 3300005262 Bacteria 5852
22 Ga0065165_1009403 3300005262 Bacteria 4387
23 Ga0065704_10092082 3300005289 Bacteria 2675
24 Ga0070658_10002918 3300005327 Bacteria 14176
25 Ga0070658_10018082 3300005327 Bacteria 5638
26 Ga0070660_100002907 3300005339 Bacteria 11791
27 Ga0070660_100005338 3300005339 Bacteria 8891
28 Ga0070660_100005950 3300005339 Bacteria 8434
29 Ga0070661_100000777 3300005344 Bacteria 23039
30 Ga0070661_100003102 3300005344 Bacteria 11433
31 Ga0070661_100021860 3300005344 Bacteria 4575
32 Ga0070659_100006169 3300005366 Bacteria 8656
33 Ga0070714_100002012 3300005435 Bacteria 14877
34 Ga0070714_100016316 3300005435 Bacteria 5993
35 Ga0070713_100043622 3300005436 Bacteria 3667
36 Ga0070710_10023642 3300005437 Bacteria 3232
37 Ga0070662_100000114 3300005457 Bacteria 45016
38 Ga0070681_10018617 3300005458 Bacteria 6945
39 Ga0070699_100069173 3300005518 Bacteria 3068
40 Ga0070679_100003474 3300005530 Bacteria 14431
41 Ga0070679_100008428 3300005530 Bacteria 9703
42 Ga0070679_100073531 3300005530 Bacteria 3409
43 Ga0070684_100024522 3300005535 Bacteria 5061
44 Ga0068853_100002576 3300005539 Bacteria 13628
45 Ga0068853_100004146 3300005539 Bacteria 11175
46 Ga0070696_100002380 3300005546 Bacteria 12442
47 Ga0068855_100000832 3300005563 Bacteria 38157
48 Ga0068855_100077135 3300005563 Bacteria 3866
49 Ga0070664_100000514 3300005564 Bacteria 29415
50 Ga0068857_100027833 3300005577 Bacteria 4984
51 Ga0068856_100007455 3300005614 Bacteria 10677
52 Ga0068856_100124153 3300005614 Bacteria 2584
53 Ga0068852_100003799 3300005616 Bacteria 10597
54 Ga0068852_100013584 3300005616 Bacteria 6234
55 Ga0075364_10007316 3300006051 Bacteria 6553
56 Ga0075362_10008410 3300006177 Bacteria 3944
57 Ga0105240_10003438 3300009093 Bacteria 24585
58 Ga0105240_10010266 3300009093 Bacteria 13183
59 Ga0105241_10001750 3300009174 Bacteria 16473
60 Ga0105248_10001085 3300009177 Bacteria 30086
61 Ga0105248_10041753 3300009177 Bacteria 5143
62 Ga0105238_10000656 3300009551 Bacteria 36235
63 Ga0105238_10001480 3300009551 Bacteria 23574
64 Ga0157373_10002960 3300013100 Bacteria 12868
65 Ga0157373_10044902 3300013100 Bacteria 3155
66 Ga0157371_10000273 3300013102 Bacteria 70036
67 Ga0157371_10008480 3300013102 Bacteria 8181
68 Ga0157370_10003487 3300013104 Bacteria 18453
69 Ga0157370_10072291 3300013104 Bacteria 3255
70 Ga0157369_10086068 3300013105 Bacteria 3358
71 Ga0157369_10118884 3300013105 Bacteria 2805
72 Ga0157372_10001706 3300013307 Bacteria 23820
73 Ga0157372_10002025 3300013307 Bacteria 22020
74 Ga0157375_10008858 3300013308 Bacteria 8812
75 Ga0157376_10002616 3300014969 Bacteria 12237
76 Ga0213872_10003127 3300021361 Bacteria 9303
77 Ga0209435_100010 3300025206 Bacteria 475373
78 Ga0207425_1003256 3300025245 Bacteria 5297
79 Ga0209646_1000001 3300025246 Bacteria 3092932
80 Ga0209026_1000001 3300025250 Bacteria 1228671
81 Ga0209759_1000001 3300025256 Bacteria 2799452
82 Ga0209565_1000102 3300025263 Bacteria 127545
83 Ga0209565_1001966 3300025263 Bacteria 8046
84 Ga0209673_1000189 3300025273 Bacteria 123470
85 Ga0209130_1000141 3300025284 Bacteria 115378
86 Ga0209130_1001786 3300025284 Bacteria 12651
87 Ga0209675_1000288 3300025291 Bacteria 47740
88 Ga0209675_1001628 3300025291 Bacteria 12606
89 Ga0209675_1003921 3300025291 Bacteria 6828
90 Ga0209676_1000069 3300025292 Bacteria 312462
91 Ga0209025_1009604 3300025294 Bacteria 6711
92 Ga0209025_1010602 3300025294 Bacteria 6219
93 Ga0209025_1011648 3300025294 Bacteria 5762
94 Ga0209564_1000415 3300025295 Bacteria 75119
95 Ga0209564_1000575 3300025295 Bacteria 58260
96 Ga0209758_1006880 3300025297 Bacteria 7946
97 Ga0209050_1000023 3300025298 Bacteria 537172
98 Ga0209256_1000003 3300025299 Bacteria 1661127
99 Ga0207426_1000145 3300025302 Bacteria 191065
100 Ga0207426_1003886 3300025302 Bacteria 7700
101 Ga0209051_1000017 3300025303 Bacteria 537172
102 Ga0209051_1000173 3300025303 Bacteria 117170
103 Ga0209257_1000041 3300025304 Bacteria 537172
104 Ga0209257_1000096 3300025304 Bacteria 259390
105 Ga0207654_10006397 3300025911 Bacteria 5927
106 Ga0207707_10001205 3300025912 Bacteria 24338
107 Ga0207695_10002798 3300025913 Bacteria 25367
108 Ga0207657_10000151 3300025919 Bacteria 70697
109 Ga0207657_10000751 3300025919 Bacteria 34386
110 Ga0207657_10003042 3300025919 Bacteria 17950
111 Ga0207649_10009015 3300025920 Bacteria 5449
112 Ga0207652_10001415 3300025921 Bacteria 21290
113 Ga0207652_10048913 3300025921 Bacteria 3617
114 Ga0207681_10017137 3300025923 Bacteria 4545
115 Ga0207694_10001041 3300025924 Bacteria 24125
116 Ga0207644_10051818 3300025931 Bacteria 2947
117 Ga0207690_10000861 3300025932 Bacteria 19453
118 Ga0207690_10008331 3300025932 Bacteria 6152
119 Ga0207706_10000386 3300025933 Bacteria 48203
120 Ga0207706_10072589 3300025933 Bacteria 3027
121 Ga0207711_10012604 3300025941 Bacteria 7022
122 Ga0207661_10009706 3300025944 Bacteria 6910
123 Ga0207679_10038036 3300025945 Bacteria 3426
124 Ga0207667_10000460 3300025949 Bacteria 54739
125 Ga0207667_10005307 3300025949 Bacteria 15700
126 Ga0207667_10009687 3300025949 Bacteria 11334
127 Ga0207639_10002272 3300026041 Bacteria 12924
128 Ga0207678_10003830 3300026067 Bacteria 13532
129 Ga0207702_10014388 3300026078 Bacteria 6569
130 Ga0207648_10009366 3300026089 Bacteria 9384
131 Ga0207674_10000248 3300026116 Bacteria 67145
132 Ga0207674_10001420 3300026116 Bacteria 30917
133 Ga0207698_10000475 3300026142 Bacteria 23321
134 Ga0207698_10009358 3300026142 Bacteria 6244
135 Ga0209970_1000060 3300027614 Bacteria 14556
136 Ga0307515_10016895 3300028794 Bacteria 13338
137 Ga0265330_10000110 3300031235 Bacteria 68461
138 Ga0265332_10000005 3300031238 Bacteria 377525
139 Ga0265332_10000011 3300031238 Bacteria 284299
140 Ga0265316_10041313 3300031344 Bacteria 3692
141 Ga0307513_10000004 3300031456 Bacteria 558931
142 Ga0307513_10000015 3300031456 Bacteria 296183
143 Ga0307513_10009555 3300031456 Bacteria 12258
144 Ga0265313_10008118 3300031595 Bacteria 7027
145 Ga0307514_10000529 3300031649 Bacteria 74752
146 Ga0265314_10000026 3300031711 Bacteria 284299
147 Ga0265314_10002021 3300031711 Bacteria 21531
148 Ga0265314_10009030 3300031711 Bacteria 8473
149 Ga0265342_10005935 3300031712 Bacteria 9195
150 Ga0307516_10008540 3300031730 Bacteria 11567
151 Ga0395899_0033922 3300037312 Bacteria 3832
152 Ga0395900_0024627 3300037418 Bacteria 6159
153 Ga0395900_0060986 3300037418 Bacteria 3879
154 Ga0395898_0013943 3300037466 Bacteria 8261
155 Ga0395898_0026016 3300037466 Bacteria 5892
156 Ga0395905_0000025 3300037471 Bacteria 317571
157 Ga0395905_0000353 3300037471 Bacteria 65228
158 Ga0395905_0010745 3300037471 Bacteria 8876
159 Ga0395905_0024283 3300037471 Bacteria 5721
160 Ga0395905_0058583 3300037471 Bacteria 3601
161 Ga0395905_0062991 3300037471 Bacteria 3469
162 Ga0395901_0127564 3300038443 Bacteria 2674
163 Ga0436361_1170859 3300039447 Bacteria 26091
164 Ga0439449_0000777 3300042007 Bacteria 12288
165 Ga0451577_0000419 3300042876 Bacteria 76708
166 Ga0451577_0005088 3300042876 Bacteria 13560
167 Ga0466969_0004282 3300044656 Bacteria 7589
168 Ga0466966_0000676 3300044684 Bacteria 21625
169 Ga0466961_0001344 3300044693 Bacteria 15148
170 Ga0453684_0000475 3300044712 Bacteria 159174
171 Ga0466957_0046172 3300044842 Bacteria 2644
172 Ga0466959_0017462 3300045049 Bacteria 5261
173 Ga0451576_0004269 3300045051 Bacteria 18733
174 Ga0451576_0006070 3300045051 Bacteria 14903
175 Ga0495638_0000143 3300046460 Bacteria 113640
176 Ga0495597_0000435 3300046542 Bacteria 35678
177 Ga0496102_0009753 3300048905 Bacteria 8256
178 Ga0496125_0005304 3300048928 Bacteria 14409
179 Ga0496126_0020891 3300048929 Bacteria 6409
180 Ga0501047_0079383 3300049581 Bacteria 3155
181 Ga0501080_0058324 3300049742 Bacteria 3594
182 nmdc:mga07m45_16428_c1 3300050496 Bacteria 3962
183 Ga0500568_0000074 3300053139 Bacteria 94957
184 Ga0500616_0000825 3300053153 Bacteria 35079
185 Ga0500645_000326 3300053730 Bacteria 33814

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009177 Ga0105248_10001085 Ga0105248_1000108510 708
2 3300025941 Ga0207711_10012604 Ga0207711_100126044 708
3 3300005339 Ga0070660_100005338 Ga0070660_1000053387 725
4 3300005344 Ga0070661_100003102 Ga0070661_1000031026 725
5 3300005539 Ga0068853_100002576 Ga0068853_1000025763 725
6 3300013307 Ga0157372_10002025 Ga0157372_1000202513 725
7 3300025919 Ga0207657_10000751 Ga0207657_1000075121 725
8 3300025931 Ga0207644_10051818 Ga0207644_100518182 725
9 3300026041 Ga0207639_10002272 Ga0207639_100022727 725
10 3300048905 Ga0496102_0009753 Ga0496102_0009753_1920_4235 725
11 3300031595 Ga0265313_10008118 Ga0265313_100081184 726
12 3300005530 Ga0070679_100008428 Ga0070679_1000084284 731
13 3300037312 Ga0395899_0033922 Ga0395899_0033922_821_3130 734
14 3300037418 Ga0395900_0060986 Ga0395900_0060986_747_3056 734
15 3300037466 Ga0395898_0026016 Ga0395898_0026016_747_3056 734
16 3300044656 Ga0466969_0004282 Ga0466969_0004282_101_2431 736
17 3300025294 Ga0209025_1010602 Ga0209025_10106022 738
18 3300031730 Ga0307516_10008540 Ga0307516_100085406 740
19 3300044842 Ga0466957_0046172 Ga0466957_0046172_227_2536 741
20 3300025263 Ga0209565_1001966 Ga0209565_10019661 743
21 3300025291 Ga0209675_1001628 Ga0209675_10016285 743
22 3300025297 Ga0209758_1006880 Ga0209758_10068806 743
23 3300003187 JGI25151J46595_10005768 JGI25151J46595_100057683 744
24 3300005339 Ga0070660_100002907 Ga0070660_1000029076 744
25 3300005344 Ga0070661_100000777 Ga0070661_10000077722 744
26 3300005458 Ga0070681_10018617 Ga0070681_100186173 744
27 3300005530 Ga0070679_100003474 Ga0070679_1000034741 744
28 3300005614 Ga0068856_100124153 Ga0068856_1001241532 744
29 3300005616 Ga0068852_100003799 Ga0068852_1000037993 744
30 3300009093 Ga0105240_10003438 Ga0105240_100034387 744
31 3300009551 Ga0105238_10000656 Ga0105238_1000065620 744
32 3300013100 Ga0157373_10044902 Ga0157373_100449022 744
33 3300013307 Ga0157372_10001706 Ga0157372_100017068 744
34 3300025294 Ga0209025_1011648 Ga0209025_10116482 744
35 3300025932 Ga0207690_10008331 Ga0207690_100083314 744
36 3300025949 Ga0207667_10005307 Ga0207667_1000530714 744
37 3300026116 Ga0207674_10001420 Ga0207674_1000142013 744
38 3300031456 Ga0307513_10000015 Ga0307513_10000015239 744
39 3300031711 Ga0265314_10002021 Ga0265314_1000202111 744
40 3300053730 Ga0500645_000326 Ga0500645_000326_26179_28617 745
41 iso_pu_bacteria 2597490356 2599101256 746
42 iso_pu_bacteria 2846952575 2846954023 746
43 iso_pu_bacteria 2848858292 2848859802 746
44 3300003771 Ga0055526_1003256 Ga0055526_10032562 747
45 3300003773 Ga0055537_1000165 Ga0055537_100016547 747
46 3300003775 Ga0055524_1000261 Ga0055524_100026122 747
47 3300003784 Ga0055534_1001463 Ga0055534_10014636 747
48 3300003790 Ga0055528_1000723 Ga0055528_10007236 747
49 3300025263 Ga0209565_1000102 Ga0209565_100010265 747
50 3300025273 Ga0209673_1000189 Ga0209673_100018950 747
51 3300025291 Ga0209675_1000288 Ga0209675_100028833 747
52 3300025295 Ga0209564_1000415 Ga0209564_100041541 747
53 3300025299 Ga0209256_1000003 Ga0209256_1000003949 747
54 3300045049 Ga0466959_0017462 Ga0466959_0017462_1786_4104 747
55 iso_pu_bacteria 2904479285 2904482947 747
56 3300021361 Ga0213872_10003127 Ga0213872_100031276 748
57 3300039447 Ga0436361_1170859 Ga0436361_1170859_5713_8019 748
58 3300009177 Ga0105248_10041753 Ga0105248_100417532 749
59 3300027614 Ga0209970_1000060 Ga0209970_10000603 749
60 3300031238 Ga0265332_10000005 Ga0265332_10000005303 750
61 3300037471 Ga0395905_0000353 Ga0395905_0000353_59095_61488 750
62 3300042876 Ga0451577_0005088 Ga0451577_0005088_4555_6906 750
63 3300045051 Ga0451576_0006070 Ga0451576_0006070_8403_10754 750
64 iso_pu_bacteria 2919704043 2919707452 750
65 3300003792 Ga0055540_1001526 Ga0055540_10015262 751
66 3300003794 Ga0055531_10001358 Ga0055531_100013584 751
67 3300005327 Ga0070658_10018082 Ga0070658_100180824 751
68 3300005435 Ga0070714_100002012 Ga0070714_10000201214 751
69 3300005535 Ga0070684_100024522 Ga0070684_1000245221 751
70 3300005539 Ga0068853_100004146 Ga0068853_1000041462 751
71 3300005577 Ga0068857_100027833 Ga0068857_1000278332 751
72 3300005614 Ga0068856_100007455 Ga0068856_1000074557 751
73 3300009093 Ga0105240_10010266 Ga0105240_1001026610 751
74 3300009174 Ga0105241_10001750 Ga0105241_100017507 751
75 3300009551 Ga0105238_10001480 Ga0105238_1000148020 751
76 3300013102 Ga0157371_10008480 Ga0157371_100084802 751
77 3300013104 Ga0157370_10072291 Ga0157370_100722912 751
78 3300013105 Ga0157369_10086068 Ga0157369_100860682 751
79 3300025303 Ga0209051_1000173 Ga0209051_100017315 751
80 3300025304 Ga0209257_1000096 Ga0209257_100009624 751
81 3300025911 Ga0207654_10006397 Ga0207654_100063972 751
82 3300025912 Ga0207707_10001205 Ga0207707_1000120519 751
83 3300025913 Ga0207695_10002798 Ga0207695_100027986 751
84 3300025919 Ga0207657_10000151 Ga0207657_1000015142 751
85 3300025921 Ga0207652_10001415 Ga0207652_100014157 751
86 3300025924 Ga0207694_10001041 Ga0207694_100010415 751
87 3300025944 Ga0207661_10009706 Ga0207661_100097065 751
88 3300025945 Ga0207679_10038036 Ga0207679_100380361 751
89 3300025949 Ga0207667_10000460 Ga0207667_1000046033 751
90 3300026067 Ga0207678_10003830 Ga0207678_1000383011 751
91 3300026078 Ga0207702_10014388 Ga0207702_100143882 751
92 3300026116 Ga0207674_10000248 Ga0207674_1000024820 751
93 3300026142 Ga0207698_10000475 Ga0207698_100004758 751
94 3300031711 Ga0265314_10009030 Ga0265314_100090306 751
95 3300031712 Ga0265342_10005935 Ga0265342_100059356 751
96 3300037471 Ga0395905_0062991 Ga0395905_0062991_772_3120 751
97 3300038443 Ga0395901_0127564 Ga0395901_0127564_94_2442 751
98 3300042007 Ga0439449_0000777 Ga0439449_0000777_4142_6451 751
99 3300042876 Ga0451577_0000419 Ga0451577_0000419_24845_27259 751
100 3300044712 Ga0453684_0000475 Ga0453684_0000475_45538_47952 751
101 3300045051 Ga0451576_0004269 Ga0451576_0004269_9249_11663 751
102 iso_pu_bacteria 2511231002 2511245846 751
103 iso_pu_bacteria 2842718218 2842719130 751
104 iso_pu_bacteria 2881101125 2881102899 751
105 iso_pu_bacteria 2974320154 2974324232 751
106 3300005327 Ga0070658_10002918 Ga0070658_100029182 752
107 3300005339 Ga0070660_100005950 Ga0070660_1000059506 752
108 3300005344 Ga0070661_100021860 Ga0070661_1000218602 752
109 3300005366 Ga0070659_100006169 Ga0070659_1000061693 752
110 3300005435 Ga0070714_100016316 Ga0070714_1000163164 752
111 3300005436 Ga0070713_100043622 Ga0070713_1000436222 752
112 3300005437 Ga0070710_10023642 Ga0070710_100236422 752
113 3300005457 Ga0070662_100000114 Ga0070662_10000011411 752
114 3300005518 Ga0070699_100069173 Ga0070699_1000691732 752
115 3300005530 Ga0070679_100073531 Ga0070679_1000735312 752
116 3300005546 Ga0070696_100002380 Ga0070696_1000023807 752
117 3300005563 Ga0068855_100000832 Ga0068855_10000083217 752
118 3300005563 Ga0068855_100077135 Ga0068855_1000771352 752
119 3300005564 Ga0070664_100000514 Ga0070664_10000051416 752
120 3300005616 Ga0068852_100013584 Ga0068852_1000135843 752
121 3300006177 Ga0075362_10008410 Ga0075362_100084101 752
122 3300013100 Ga0157373_10002960 Ga0157373_100029602 752
123 3300013102 Ga0157371_10000273 Ga0157371_1000027333 752
124 3300013104 Ga0157370_10003487 Ga0157370_1000348714 752
125 3300013105 Ga0157369_10118884 Ga0157369_101188842 752
126 3300013308 Ga0157375_10008858 Ga0157375_100088584 752
127 3300025919 Ga0207657_10003042 Ga0207657_1000304215 752
128 3300025920 Ga0207649_10009015 Ga0207649_100090152 752
129 3300025921 Ga0207652_10048913 Ga0207652_100489132 752
130 3300025923 Ga0207681_10017137 Ga0207681_100171372 752
131 3300025932 Ga0207690_10000861 Ga0207690_100008617 752
132 3300025933 Ga0207706_10000386 Ga0207706_1000038632 752
133 3300025933 Ga0207706_10072589 Ga0207706_100725892 752
134 3300025949 Ga0207667_10009687 Ga0207667_100096878 752
135 3300026089 Ga0207648_10009366 Ga0207648_100093663 752
136 3300026142 Ga0207698_10009358 Ga0207698_100093583 752
137 3300031344 Ga0265316_10041313 Ga0265316_100413132 752
138 3300037418 Ga0395900_0024627 Ga0395900_0024627_3792_6086 752
139 3300037466 Ga0395898_0013943 Ga0395898_0013943_3340_5739 752
140 3300037471 Ga0395905_0010745 Ga0395905_0010745_2523_4922 752
141 3300037471 Ga0395905_0024283 Ga0395905_0024283_2632_4941 752
142 3300046460 Ga0495638_0000143 Ga0495638_0000143_93330_95741 752
143 3300050496 nmdc:mga07m45_16428_c1 nmdc:mga07m45_16428_c1_420_2750 752
144 3300053139 Ga0500568_0000074 Ga0500568_0000074_74540_76951 752
145 3300053153 Ga0500616_0000825 Ga0500616_0000825_17897_20275 752
146 3300037471 Ga0395905_0000025 Ga0395905_0000025_158980_161403 753
147 3300037471 Ga0395905_0058583 Ga0395905_0058583_433_2760 753
148 3300044684 Ga0466966_0000676 Ga0466966_0000676_18704_21037 753
149 3300044693 Ga0466961_0001344 Ga0466961_0001344_11320_13671 753
150 3300049581 Ga0501047_0079383 Ga0501047_0079383_95_2407 753
151 3300049742 Ga0501080_0058324 Ga0501080_0058324_343_2655 753
152 iso_pu_bacteria 2547132374 2548498848 753
153 iso_pu_bacteria 2643221609 2644058943 753
154 iso_pu_bacteria 2643221611 2644071167 753
155 iso_pu_bacteria 2643221717 2644648308 753
156 iso_pu_bacteria 2738543012 2739246200 753
157 iso_pu_bacteria 2816332133 2816471421 753
158 iso_pu_bacteria 2894023352 2894024593 753
159 3300031456 Ga0307513_10000004 Ga0307513_1000000485 754
160 3300003781 Ga0055536_1002347 Ga0055536_10023473 755
161 3300003791 Ga0055530_10000190 Ga0055530_1000019054 755
162 3300003792 Ga0055540_1000187 Ga0055540_100018757 755
163 3300003794 Ga0055531_10001522 Ga0055531_1000152212 755
164 3300005289 Ga0065704_10092082 Ga0065704_100920822 755
165 3300006051 Ga0075364_10007316 Ga0075364_100073162 755
166 3300014969 Ga0157376_10002616 Ga0157376_100026166 755
167 3300025245 Ga0207425_1003256 Ga0207425_10032563 755
168 3300025284 Ga0209130_1001786 Ga0209130_10017867 755
169 3300025292 Ga0209676_1000069 Ga0209676_100006937 755
170 3300025294 Ga0209025_1009604 Ga0209025_10096043 755
171 3300025298 Ga0209050_1000023 Ga0209050_1000023212 755
172 3300025302 Ga0207426_1003886 Ga0207426_10038863 755
173 3300025303 Ga0209051_1000017 Ga0209051_1000017212 755
174 3300025304 Ga0209257_1000041 Ga0209257_1000041212 755
175 3300028794 Ga0307515_10016895 Ga0307515_100168955 755
176 3300031456 Ga0307513_10009555 Ga0307513_100095557 755
177 3300031649 Ga0307514_10000529 Ga0307514_1000052965 755
178 3300046542 Ga0495597_0000435 Ga0495597_0000435_27998_30352 755
179 3300048928 Ga0496125_0005304 Ga0496125_0005304_8114_10456 755
180 3300048929 Ga0496126_0020891 Ga0496126_0020891_3510_5852 755
181 iso_pu_bacteria 2643221570 2643867945 755
182 iso_pu_bacteria 2643221596 2643991810 755
183 iso_pu_bacteria 2643221652 2644293553 755
184 iso_pu_bacteria 2990710928 2990713687 755
185 3300002987 JGI25159J45721_1000256 JGI25159J45721_10002565 756
186 3300003354 JGI25160J50197_1000098 JGI25160J50197_100009820 756
187 3300003374 JGI25161J50226_1000037 JGI25161J50226_100003758 756
188 3300004625 Ga0055543_1000482 Ga0055543_10004823 756
189 3300005262 Ga0065165_1006785 Ga0065165_10067852 756
190 3300005262 Ga0065165_1009403 Ga0065165_10094035 756
191 3300025284 Ga0209130_1000141 Ga0209130_100014172 756
192 3300025295 Ga0209564_1000575 Ga0209564_100057538 756
193 3300025302 Ga0207426_1000145 Ga0207426_100014569 756
194 3300002704 JGI25155J39150_1000005 JGI25155J39150_100000536 757
195 3300002705 JGI25156J39149_1000006 JGI25156J39149_100000636 757
196 3300002738 JGI25154J39366_1000015 JGI25154J39366_1000015211 757
197 3300002741 JGI25157J39369_1000016 JGI25157J39369_1000016147 757
198 3300025206 Ga0209435_100010 Ga0209435_10001047 757
199 3300025246 Ga0209646_1000001 Ga0209646_10000012096 757
200 3300025250 Ga0209026_1000001 Ga0209026_1000001752 757
201 3300025256 Ga0209759_1000001 Ga0209759_10000011727 757
202 3300025291 Ga0209675_1003921 Ga0209675_10039212 757
203 3300031235 Ga0265330_10000110 Ga0265330_1000011063 757
204 3300031238 Ga0265332_10000011 Ga0265332_1000001162 757
205 3300031711 Ga0265314_10000026 Ga0265314_10000026206 757

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02738

MoCoBD_1

Molybdopterin cofactor-binding domain

170

413

0.98

PF20256

MoCoBD_2

Molybdopterin cofactor-binding domain

472

757

0.98

PF01315

Ald_Xan_dh_C

Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain

54

161

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2w54-assembly2.cif.gz_D crystal structure of xanthine dehydrogenase from rhodobacter capsulatus in complex with bound inhibitor pterin-6-aldehyde 0.9695 4 753
2w55-assembly4.cif.gz_H crystal structure of xanthine dehydrogenase (e232q variant) from rhodobacter capsulatus in complex with hypoxanthine 0.9684 4 753
6ac4-assembly1.cif.gz_A rat xanthine oxidoreductase, d428n variant 0.9615 7 753
6a7x-assembly1.cif.gz_A rat xanthine oxidoreductase, d428a variant, nad bound form 0.9614 7 753
6ac1-assembly1.cif.gz_A rat xanthine oxidoreductase, nadh bound form 0.9609 7 753
ID Description Score Start End Superfamily
3eubC01 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead 0.979 33 124 3.90.1170.50
3zyvA08 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.961 138 390 3.30.365.10
3eubC01 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead 0.9583 33 124 3.90.1170.50
af_B7F856_210_321_3.30.365.10 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.9561 267 379 3.30.365.10
4c7yA03 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead 0.9559 34 124 3.90.1170.50
ID Description Score Start End GO Terms
AF-A0A3D0C5M6-F1-model_v4 Xanthine dehydrogenase molybdopterin binding subunit 0.9797 250 459 GO:0005506
GO:0016491
AF-A0A285YVI5-F1-model_v4 Xanthine dehydrogenase, molybdenum binding subunit apoprotein 0.9794 7 753 GO:0005506
GO:0016491
GO:0030151
AF-A0A847JEW8-F1-model_v4 Xanthine dehydrogenase molybdopterin binding subunit (EC 1.17.1.4) 0.977 7 646 GO:0005506
GO:0016491
GO:0030151
AF-A0A5C4JRC2-F1-model_v4 Xanthine dehydrogenase molybdopterin binding subunit (EC 1.17.1.4) 0.9768 7 753 GO:0004854
GO:0005506
GO:0030151
AF-A0A0F5FTU4-F1-model_v4 Aldehyde oxidase 0.9768 7 753 GO:0005506
GO:0016491
GO:0030151
GO:0043546

Feature Viewer

pLDDT pTM Quality
88.38 0.9 High
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Predicted Structure (AlphaFold2)

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