F317014

General Info

Members Datasets Scaffolds Average Seq Length
207 99 414 206

Family's Representative Sequence

Representative Sequence 3300049572|Ga0501036_0188073|Ga0501036_0188073_832_1512
Length 226
Sequence LGGRVALRFAALPGHDEVIMFHEIRFPTAVAFHSTGGPERKTEIVTLGSGFEERNAVWANSRRRYDVGSGVKTLDDLHAVIAFFEARLGRLYGFRFKDFADFKSCAPDAGVSPLDQAIGAGDGAATSFQLVKTYTSGPASWTRQIKKPVDGQVRVAIDGVEQTSGFTVDATTGLVTFAIPPASGAAITAGFEFDTPARFDSDQLSINLASFAAGEIPSIPIVEMLV

Samples

Sample ID Description Type Environment
1 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
17 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
18 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
19 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
22 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
23 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
24 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
41 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
42 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
56 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
57 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
67 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
68 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
69 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
70 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
71 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
72 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
84 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
95 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
96 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
97 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
98 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
99 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.03
Metatranscriptomes 0
Isolates 0.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.86
Nodule 0
Rhizoplane 0.48
Rhizosphere 88.89
Stem 0
Stem Tuber 0
Unclassified 5.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501036_0188073 3300049572 Bacteria 1738
2 Ga0055536_1000206 3300003781 Bacteria 48370
3 Ga0055531_10013479 3300003794 Bacteria 3763
4 Ga0070658_10183461 3300005327 Bacteria 1761
5 Ga0070666_10017460 3300005335 Bacteria 4600
6 Ga0070680_100001245 3300005336 Bacteria 18368
7 Ga0070680_100011092 3300005336 Bacteria 6965
8 Ga0070659_100015859 3300005366 Bacteria 5650
9 Ga0070659_100079567 3300005366 Bacteria 2616
10 Ga0070667_100079703 3300005367 Bacteria 2800
11 Ga0070681_10000159 3300005458 Bacteria 50976
12 Ga0070681_10044556 3300005458 Bacteria 4441
13 Ga0070679_100004151 3300005530 Bacteria 13359
14 Ga0070679_100369516 3300005530 Bacteria 1381
15 Ga0068853_100148611 3300005539 Bacteria 2108
16 Ga0070696_100078080 3300005546 Bacteria 2340
17 Ga0068856_100228944 3300005614 Bacteria 1874
18 Ga0081539_10004917 3300005985 Bacteria 14236
19 Ga0105240_10247106 3300009093 Bacteria 2065
20 Ga0105240_10346863 3300009093 Bacteria 1685
21 Ga0105248_10000009 3300009177 Bacteria 403549
22 Ga0105239_10028543 3300010375 Bacteria 6135
23 Ga0157373_10001481 3300013100 Bacteria 17893
24 Ga0157373_10009419 3300013100 Bacteria 7213
25 Ga0157370_10063985 3300013104 Bacteria 3483
26 Ga0157370_10797210 3300013104 Bacteria 860
27 Ga0157369_10192437 3300013105 Bacteria 2143
28 Ga0157372_10087825 3300013307 Bacteria 3529
29 Ga0157372_10611027 3300013307 Bacteria 1271
30 Ga0213874_10005568 3300021377 Bacteria 2942
31 Ga0213876_10000254 3300021384 Bacteria 50324
32 Ga0213876_10001116 3300021384 Bacteria 17148
33 Ga0213876_10008337 3300021384 Bacteria 5609
34 Ga0213876_10045282 3300021384 Bacteria 2327
35 Ga0209676_1000082 3300025292 Bacteria 280400
36 Ga0209676_1002460 3300025292 Bacteria 13095
37 Ga0209050_1043395 3300025298 Bacteria 1216
38 Ga0209257_1000363 3300025304 Bacteria 91820
39 Ga0207680_10043240 3300025903 Bacteria 2641
40 Ga0207705_10004031 3300025909 Bacteria 11171
41 Ga0207707_10000002 3300025912 Bacteria 1142054
42 Ga0207707_10022310 3300025912 Bacteria 5535
43 Ga0207695_10239558 3300025913 Bacteria 1716
44 Ga0207660_10000768 3300025917 Bacteria 21345
45 Ga0207660_10003583 3300025917 Bacteria 10110
46 Ga0207657_10117337 3300025919 Bacteria 2192
47 Ga0207652_10001120 3300025921 Bacteria 24155
48 Ga0207652_10001728 3300025921 Bacteria 19049
49 Ga0207711_10000003 3300025941 Bacteria 1042791
50 Ga0207711_10000005 3300025941 Bacteria 822972
51 Ga0207711_10000009 3300025941 Bacteria 580864
52 Ga0207711_10000015 3300025941 Bacteria 494097
53 Ga0207711_10093870 3300025941 Bacteria 2643
54 Ga0207711_10473270 3300025941 Bacteria 1167
55 Ga0207667_10592268 3300025949 Bacteria 1119
56 Ga0207658_10017967 3300025986 Bacteria 4875
57 Ga0207639_10588876 3300026041 Bacteria 1025
58 Ga0207702_11048382 3300026078 Bacteria 809
59 Ga0207641_10057706 3300026088 Viruses 3302
60 Ga0265337_1003353 3300028556 Bacteria 6970
61 Ga0265334_10012660 3300028573 Bacteria 3542
62 Ga0265318_10000498 3300028577 Bacteria 28795
63 Ga0265338_10012557 3300028800 Bacteria 9649
64 Ga0265338_10147342 3300028800 Bacteria 1834
65 Ga0265338_10267441 3300028800 Bacteria 1254
66 Ga0265338_10709330 3300028800 Bacteria 694
67 Ga0265330_10093179 3300031235 Bacteria 1292
68 Ga0265330_10189136 3300031235 Bacteria 871
69 Ga0265332_10096407 3300031238 Bacteria 1249
70 Ga0265320_10003513 3300031240 Bacteria 10504
71 Ga0265325_10000281 3300031241 Bacteria 36084
72 Ga0265325_10001488 3300031241 Bacteria 16500
73 Ga0265325_10085419 3300031241 Unclassified 1563
74 Ga0265340_10000034 3300031247 Bacteria 65594
75 Ga0265340_10019905 3300031247 Bacteria 3453
76 Ga0265339_10002064 3300031249 Bacteria 14752
77 Ga0265339_10021884 3300031249 Bacteria 3711
78 Ga0265339_10044992 3300031249 Bacteria 2432
79 Ga0265339_10291883 3300031249 Unclassified 779
80 Ga0265339_10354658 3300031249 Bacteria 691
81 Ga0265331_10000006 3300031250 Bacteria 418907
82 Ga0265331_10001182 3300031250 Bacteria 19775
83 Ga0265327_10000808 3300031251 Bacteria 47626
84 Ga0265316_10027914 3300031344 Bacteria 4664
85 Ga0265316_10028460 3300031344 Bacteria 4610
86 Ga0265316_10164914 3300031344 Bacteria 1655
87 Ga0265316_10293919 3300031344 Bacteria 1185
88 Ga0265313_10022094 3300031595 Bacteria 3461
89 Ga0265314_10000477 3300031711 Bacteria 52706
90 Ga0265314_10006320 3300031711 Bacteria 10506
91 Ga0265314_10047991 3300031711 Bacteria 3001
92 Ga0265314_10276759 3300031711 Bacteria 951
93 Ga0265342_10006260 3300031712 Bacteria 8886
94 Ga0307406_10000280 3300031901 Bacteria 29979
95 Ga0307412_10006838 3300031911 Bacteria 6473
96 Ga0307414_10086186 3300032004 Bacteria 2316
97 Ga0373937_0422697 3300036401 Bacteria 1265
98 Ga0436365_0050837 3300039437 Bacteria 16406
99 Ga0436365_0424240 3300039437 Bacteria 14058
100 Ga0436365_1735290 3300039437 Bacteria 4047
101 Ga0436365_1935268 3300039437 Bacteria 135877
102 Ga0436363_1634772 3300039450 Bacteria 5059
103 Ga0451576_0252832 3300045051 Unclassified 1842
104 Ga0495664_0113058 3300046477 Bacteria 1640
105 Ga0495628_0715896 3300046516 Bacteria 706
106 Ga0495652_0121021 3300046529 Bacteria 2088
107 Ga0495645_0109140 3300046543 Bacteria 1959
108 Ga0495633_0000384 3300046558 Bacteria 46696
109 Ga0496115_0031592 3300048918 Bacteria 4172
110 Ga0496122_0028168 3300048925 Bacteria 4778
111 Ga0496123_0002504 3300048926 Bacteria 22613
112 Ga0496126_0316463 3300048929 Bacteria 1284
113 Ga0501031_0023248 3300049568 Bacteria 4041
114 Ga0501032_0010055 3300049569 Bacteria 6831
115 Ga0501033_0007917 3300049570 Bacteria 8231
116 Ga0501033_0025013 3300049570 Bacteria 4499
117 Ga0501033_0040602 3300049570 Bacteria 3473
118 Ga0501033_0043711 3300049570 Bacteria 3336
119 Ga0501033_0050903 3300049570 Bacteria 3071
120 Ga0501033_0210758 3300049570 Bacteria 1385
121 Ga0501033_0593130 3300049570 Bacteria 760
122 Ga0501034_0035269 3300049571 Bacteria 5072
123 Ga0501034_0038563 3300049571 Bacteria 4837
124 Ga0501034_0345174 3300049571 Bacteria 1418
125 Ga0501034_0624122 3300049571 Bacteria 981
126 Ga0501036_0000541 3300049572 Bacteria 27054
127 Ga0501036_0498870 3300049572 Bacteria 1013
128 Ga0501036_0652493 3300049572 Unclassified 871
129 Ga0501037_0019340 3300049573 Bacteria 5022
130 Ga0501037_0024235 3300049573 Bacteria 4488
131 Ga0501037_0138324 3300049573 Viruses 1743
132 Ga0501037_0267985 3300049573 Bacteria 1192
133 Ga0501038_0024114 3300049574 Bacteria 5430
134 Ga0501038_0167976 3300049574 Bacteria 1778
135 Ga0501038_0222123 3300049574 Bacteria 1507
136 Ga0501038_0594948 3300049574 Unclassified 837
137 Ga0501039_0008529 3300049575 Bacteria 7814
138 Ga0501042_0013890 3300049578 Bacteria 5486
139 Ga0501042_0420661 3300049578 Bacteria 968
140 Ga0501046_0001585 3300049580 Bacteria 21747
141 Ga0501046_0005298 3300049580 Bacteria 11539
142 Ga0501046_0048490 3300049580 Bacteria 3363
143 Ga0501047_0001553 3300049581 Bacteria 22470
144 Ga0501047_0009380 3300049581 Bacteria 9245
145 Ga0501047_0010697 3300049581 Bacteria 8670
146 Ga0501047_0033845 3300049581 Bacteria 4932
147 Ga0501047_0059716 3300049581 Bacteria 3682
148 Ga0501047_0070334 3300049581 Bacteria 3370
149 Ga0501047_0213938 3300049581 Bacteria 1785
150 Ga0501047_0270679 3300049581 Bacteria 1545
151 Ga0501047_0698605 3300049581 Bacteria 832
152 Ga0501047_0720816 3300049581 Unclassified 814
153 Ga0501048_0000472 3300049582 Bacteria 28173
154 Ga0501048_0155634 3300049582 Bacteria 1617
155 Ga0501067_0000670 3300049583 Bacteria 18436
156 Ga0501069_0031032 3300049585 Bacteria 2937
157 Ga0501070_0000110 3300049586 Bacteria 72071
158 Ga0501070_0032626 3300049586 Bacteria 4358
159 Ga0501070_0137696 3300049586 Bacteria 2016
160 Ga0501070_0158387 3300049586 Unclassified 1867
161 Ga0501070_0253456 3300049586 Bacteria 1439
162 Ga0501070_0553767 3300049586 Unclassified 920
163 Ga0501072_0022451 3300049588 Bacteria 4895
164 Ga0501072_0027276 3300049588 Bacteria 4456
165 Ga0501073_0030692 3300049589 Bacteria 3836
166 Ga0501073_0254761 3300049589 Unclassified 1211
167 Ga0501073_0614540 3300049589 Unclassified 750
168 Ga0501074_0012788 3300049590 Bacteria 6101
169 Ga0501079_0005367 3300049741 Bacteria 9547
170 Ga0501079_0121456 3300049741 Bacteria 2032
171 Ga0501080_0002037 3300049742 Bacteria 17480
172 Ga0501080_0032043 3300049742 Bacteria 4900
173 Ga0501080_0063743 3300049742 Bacteria 3429
174 Ga0501080_0101523 3300049742 Bacteria 2669
175 Ga0501080_0161891 3300049742 Viruses 2066
176 Ga0501080_0182835 3300049742 Bacteria 1928
177 Ga0501080_0430392 3300049742 Bacteria 1184
178 Ga0501083_0007168 3300049744 Bacteria 7914
179 Ga0501083_0186095 3300049744 Bacteria 1356
180 Ga0501035_0001524 3300049822 Bacteria 23664
181 Ga0501035_0009115 3300049822 Bacteria 9226
182 Ga0501035_0027743 3300049822 Bacteria 5174
183 Ga0501035_0109497 3300049822 Bacteria 2421
184 Ga0501035_0309748 3300049822 Bacteria 1328
185 Ga0501035_0367188 3300049822 Bacteria 1202
186 Ga0501035_0423769 3300049822 Bacteria 1104
187 Ga0501035_0478904 3300049822 Bacteria 1027
188 Ga0501044_0001134 3300049823 Bacteria 31657
189 Ga0501044_0003131 3300049823 Bacteria 18737
190 Ga0501044_0018038 3300049823 Bacteria 7569
191 Ga0501044_0025187 3300049823 Bacteria 6308
192 Ga0501044_0070754 3300049823 Bacteria 3548
193 Ga0501044_0080627 3300049823 Bacteria 3296
194 Ga0501044_0093079 3300049823 Bacteria 3039
195 Ga0501044_0170486 3300049823 Bacteria 2148
196 Ga0501044_0189800 3300049823 Bacteria 2018
197 Ga0501044_0351854 3300049823 Unclassified 1392
198 Ga0501044_0623697 3300049823 Bacteria 969
199 Ga0501044_0837166 3300049823 Bacteria 797
200 Ga0500644_0002763 3300053088 Bacteria 4376
201 Ga0500651_0002010 3300053093 Bacteria 10556
202 Ga0501084_0000546 3300054114 Bacteria 28653
203 Ga0501084_0002711 3300054114 Bacteria 14264
204 Ga0501084_0573460 3300054114 Bacteria 953
205 Ga0501082_0612881 3300060353 Bacteria 952
206 2928973779 2928972540 Bacteria 3058286
207 2977241259 2977240413 Bacteria 3191065
208 Ga0501036_0188073
209 Ga0055536_1000206
210 Ga0055531_10013479
211 Ga0070658_10183461
212 Ga0070666_10017460
213 Ga0070680_100001245
214 Ga0070680_100011092
215 Ga0070659_100015859
216 Ga0070659_100079567
217 Ga0070667_100079703
218 Ga0070681_10000159
219 Ga0070681_10044556
220 Ga0070679_100004151
221 Ga0070679_100369516
222 Ga0068853_100148611
223 Ga0070696_100078080
224 Ga0068856_100228944
225 Ga0081539_10004917
226 Ga0105240_10247106
227 Ga0105240_10346863
228 Ga0105248_10000009
229 Ga0105239_10028543
230 Ga0157373_10001481
231 Ga0157373_10009419
232 Ga0157370_10063985
233 Ga0157370_10797210
234 Ga0157369_10192437
235 Ga0157372_10087825
236 Ga0157372_10611027
237 Ga0213874_10005568
238 Ga0213876_10000254
239 Ga0213876_10001116
240 Ga0213876_10008337
241 Ga0213876_10045282
242 Ga0209676_1000082
243 Ga0209676_1002460
244 Ga0209050_1043395
245 Ga0209257_1000363
246 Ga0207680_10043240
247 Ga0207705_10004031
248 Ga0207707_10000002
249 Ga0207707_10022310
250 Ga0207695_10239558
251 Ga0207660_10000768
252 Ga0207660_10003583
253 Ga0207657_10117337
254 Ga0207652_10001120
255 Ga0207652_10001728
256 Ga0207711_10000003
257 Ga0207711_10000005
258 Ga0207711_10000009
259 Ga0207711_10000015
260 Ga0207711_10093870
261 Ga0207711_10473270
262 Ga0207667_10592268
263 Ga0207658_10017967
264 Ga0207639_10588876
265 Ga0207702_11048382
266 Ga0207641_10057706
267 Ga0265337_1003353
268 Ga0265334_10012660
269 Ga0265318_10000498
270 Ga0265338_10012557
271 Ga0265338_10147342
272 Ga0265338_10267441
273 Ga0265338_10709330
274 Ga0265330_10093179
275 Ga0265330_10189136
276 Ga0265332_10096407
277 Ga0265320_10003513
278 Ga0265325_10000281
279 Ga0265325_10001488
280 Ga0265325_10085419
281 Ga0265340_10000034
282 Ga0265340_10019905
283 Ga0265339_10002064
284 Ga0265339_10021884
285 Ga0265339_10044992
286 Ga0265339_10291883
287 Ga0265339_10354658
288 Ga0265331_10000006
289 Ga0265331_10001182
290 Ga0265327_10000808
291 Ga0265316_10027914
292 Ga0265316_10028460
293 Ga0265316_10164914
294 Ga0265316_10293919
295 Ga0265313_10022094
296 Ga0265314_10000477
297 Ga0265314_10006320
298 Ga0265314_10047991
299 Ga0265314_10276759
300 Ga0265342_10006260
301 Ga0307406_10000280
302 Ga0307412_10006838
303 Ga0307414_10086186
304 Ga0373937_0422697
305 Ga0436365_0050837
306 Ga0436365_0424240
307 Ga0436365_1735290
308 Ga0436365_1935268
309 Ga0436363_1634772
310 Ga0451576_0252832
311 Ga0495664_0113058
312 Ga0495628_0715896
313 Ga0495652_0121021
314 Ga0495645_0109140
315 Ga0495633_0000384
316 Ga0496115_0031592
317 Ga0496122_0028168
318 Ga0496123_0002504
319 Ga0496126_0316463
320 Ga0501031_0023248
321 Ga0501032_0010055
322 Ga0501033_0007917
323 Ga0501033_0025013
324 Ga0501033_0040602
325 Ga0501033_0043711
326 Ga0501033_0050903
327 Ga0501033_0210758
328 Ga0501033_0593130
329 Ga0501034_0035269
330 Ga0501034_0038563
331 Ga0501034_0345174
332 Ga0501034_0624122
333 Ga0501036_0000541
334 Ga0501036_0498870
335 Ga0501036_0652493
336 Ga0501037_0019340
337 Ga0501037_0024235
338 Ga0501037_0138324
339 Ga0501037_0267985
340 Ga0501038_0024114
341 Ga0501038_0167976
342 Ga0501038_0222123
343 Ga0501038_0594948
344 Ga0501039_0008529
345 Ga0501042_0013890
346 Ga0501042_0420661
347 Ga0501046_0001585
348 Ga0501046_0005298
349 Ga0501046_0048490
350 Ga0501047_0001553
351 Ga0501047_0009380
352 Ga0501047_0010697
353 Ga0501047_0033845
354 Ga0501047_0059716
355 Ga0501047_0070334
356 Ga0501047_0213938
357 Ga0501047_0270679
358 Ga0501047_0698605
359 Ga0501047_0720816
360 Ga0501048_0000472
361 Ga0501048_0155634
362 Ga0501067_0000670
363 Ga0501069_0031032
364 Ga0501070_0000110
365 Ga0501070_0032626
366 Ga0501070_0137696
367 Ga0501070_0158387
368 Ga0501070_0253456
369 Ga0501070_0553767
370 Ga0501072_0022451
371 Ga0501072_0027276
372 Ga0501073_0030692
373 Ga0501073_0254761
374 Ga0501073_0614540
375 Ga0501074_0012788
376 Ga0501079_0005367
377 Ga0501079_0121456
378 Ga0501080_0002037
379 Ga0501080_0032043
380 Ga0501080_0063743
381 Ga0501080_0101523
382 Ga0501080_0161891
383 Ga0501080_0182835
384 Ga0501080_0430392
385 Ga0501083_0007168
386 Ga0501083_0186095
387 Ga0501035_0001524
388 Ga0501035_0009115
389 Ga0501035_0027743
390 Ga0501035_0109497
391 Ga0501035_0309748
392 Ga0501035_0367188
393 Ga0501035_0423769
394 Ga0501035_0478904
395 Ga0501044_0001134
396 Ga0501044_0003131
397 Ga0501044_0018038
398 Ga0501044_0025187
399 Ga0501044_0070754
400 Ga0501044_0080627
401 Ga0501044_0093079
402 Ga0501044_0170486
403 Ga0501044_0189800
404 Ga0501044_0351854
405 Ga0501044_0623697
406 Ga0501044_0837166
407 Ga0500644_0002763
408 Ga0500651_0002010
409 Ga0501084_0000546
410 Ga0501084_0002711
411 Ga0501084_0573460
412 Ga0501082_0612881
413 2928973779
414 2977241259

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09343

DUF2460

Conserved hypothetical protein 2217 (DUF2460)

22

225

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
8gtc-assembly1.cif.gz_L cryo-em model of the marine siphophage vb_dshs-r4c baseplate-tail complex 0.8106 1 179
6h9c-assembly1.cif.gz_Z cryo-em structure of archaeal extremophilic internal membrane-containing haloarcula californiae icosahedral virus 1 (hciv-1) at 3.74 angstroms resolution. 0.7097 134 174
8gtc-assembly1.cif.gz_L cryo-em model of the marine siphophage vb_dshs-r4c baseplate-tail complex 0.7085 1 179
7rfo-assembly1.cif.gz_B semet tailspike protein 4 (tsp4) phage cba120, residues 1-335, obtained in the presence of liso4 0.6981 93 179
8es4-assembly1.cif.gz_F focused reconstruction of hrp29 tail 0.6463 98 173
ID Description Score Start End Superfamily
af_P30748_1_81_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.718 131 145 3.10.20.30
af_Q54EM2_220_301_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.5973 114 172 2.60.40.10
af_Q55AT6_193_284_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.5684 113 158 2.60.40.10
af_P20840_178_316_2.60.40.2430 Mainly Beta;Sandwich;Immunoglobulin-like;Agglutinin-like protein, N-terminal domain, N2 subdomain 0.5589 129 177 2.60.40.2430
af_A0A1D6MYX1_524_644_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.5433 128 174 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A0F3NM98-F1-model_v4 DUF2460 domain-containing protein 0.9497 98 175
AF-A0A6B2D8R0-F1-model_v4 deleted 0.9454 78 179
AF-A0A7V4ZZA2-F1-model_v4 Uncharacterized protein 0.937 129 174
AF-H8LPZ4-F1-model_v4 DUF2460 domain-containing protein 0.9361 76 175
AF-A0A7J4EF72-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9349 99 178

Map