F317145

General Info

Members Datasets Scaffolds Average Seq Length
207 123 200 491

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2839989709|2839992360
Length 577
Sequence ILSSLIFSPLLAALVVLLLPLRLQKLIKTITLLGTLGQMVLAIWLYIQFNGAAASNGQQGYQFVEKLNWIGFSLGTLGRFQIDYFLGVDGISVSMVLLTGIIGVIGVISSWTIKKNIKGYFLLYLLLLTSVMGCFLALDFFLFYLFFEFMLLPMYFLIGIWGGPKREYAAIKFFIYTLVGSLFILIVMIGLYTSVIDPLATATQLGLLEKGIPQPDAIRQVQQLLQQNMISSADLVRTFSIPAMMEPANFIPGSLLHVLSGVVLWSLPIRFIAFLLLFAGFAIKVPVVPVHTWLPDAHVEAPTPISVLLAAILLKVGGYGLIRIVYPVFPDAAAYFAVLVGGLGVLSIIYGALCALAMNDLKKLIAYSSVSHMGFVLLGLASLTVEGVNGAVYMMFSHGIISAMLFLVVGVIYDRAHDRMILNFRGLAKRMPAYTTFVVIAFFASLGLPGFSGFIAELLVLVGGFSAPEMSGLLPRWLTVVAVFGLLLAAAYYLWALQRMFFGKYWIFPELREKAVLTDLNAREYLMLVPLAILALLFGIFPHLLLNKIGTTITGFTQTVLQSGQEQLHMVLSTWVQ

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
3 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
4 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
5 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
6 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
7 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
75 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
76 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
77 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
78 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
79 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
80 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
81 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
82 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
85 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
86 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
87 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
90 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
91 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
105 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
111 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
112 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
113 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
114 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
119 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
120 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
121 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
123 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.14
Metatranscriptomes 0
Isolates 3.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.8
Nodule 0
Rhizoplane 0.97
Rhizosphere 85.99
Stem 0
Stem Tuber 0
Unclassified 7.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10001870 3300003316 Bacteria 68851
2 rootH1_10059906 3300003316 Bacteria 4692
3 rootH2_10002538 3300003320 Bacteria 43669
4 rootL2_10009529 3300003322 Bacteria 24087
5 rootL2_10014834 3300003322 Bacteria 13285
6 rootL2_10021916 3300003322 Bacteria 7767
7 rootL2_10084883 3300003322 Bacteria 3359
8 rootL2_10163783 3300003322 Bacteria 3800
9 rootH1_10003782 3300003316 Bacteria 1149
10 rootH1_10003782 3300003323 Bacteria 43069
11 rootH1_10010466 3300003323 Bacteria 53551
12 Ga0055536_1003023 3300003781 Bacteria 9202
13 Ga0055531_10000796 3300003794 Bacteria 26168
14 Ga0065165_1000478 3300005262 Bacteria 62182
15 Ga0065165_1001120 3300005262 Bacteria 31622
16 Ga0070658_10029382 3300005327 Bacteria 4415
17 Ga0070658_10034757 3300005327 Unclassified 4056
18 Ga0070683_100054336 3300005329 Bacteria 3714
19 Ga0070683_100087520 3300005329 Bacteria 2922
20 Ga0070683_100111594 3300005329 Bacteria 2580
21 Ga0068869_100013612 3300005334 Bacteria 5415
22 Ga0068868_100114489 3300005338 Bacteria 2194
23 Ga0070661_100007502 3300005344 Bacteria 7527
24 Ga0070661_100074932 3300005344 Bacteria 2493
25 Ga0070659_100011056 3300005366 Bacteria 6666
26 Ga0070679_100071630 3300005530 Bacteria 3457
27 Ga0070684_100043750 3300005535 Bacteria 3869
28 Ga0068853_100000074 3300005539 Bacteria 69174
29 Ga0068853_100021150 3300005539 Bacteria 5418
30 Ga0068853_100143287 3300005539 Unclassified 2146
31 Ga0070686_100001515 3300005544 Bacteria 13053
32 Ga0070665_100017930 3300005548 Bacteria 7109
33 Ga0068855_100001215 3300005563 Bacteria 31959
34 Ga0068855_100001514 3300005563 Bacteria 29103
35 Ga0068855_100008602 3300005563 Bacteria 12337
36 Ga0068855_100033733 3300005563 Bacteria 6106
37 Ga0068857_100001254 3300005577 Bacteria 19874
38 Ga0068857_100083829 3300005577 Unclassified 2848
39 Ga0068854_100029212 3300005578 Bacteria 3816
40 Ga0068856_100007688 3300005614 Bacteria 10514
41 Ga0068856_100031505 3300005614 Bacteria 5188
42 Ga0068856_100035489 3300005614 Bacteria 4887
43 Ga0068852_100000073 3300005616 Bacteria 69820
44 Ga0068852_100000212 3300005616 Bacteria 39661
45 Ga0068859_100003777 3300005617 Bacteria 15453
46 Ga0068859_100090071 3300005617 Bacteria 3118
47 Ga0068860_100034519 3300005843 Archaea 4853
48 Ga0068862_100076890 3300005844 Bacteria 2889
49 Ga0097621_100012391 3300006237 Bacteria 6319
50 Ga0075428_100003647 3300006844 Bacteria 16886
51 Ga0075429_100067503 3300006880 Bacteria 3112
52 Ga0097620_100003777 3300006931 Bacteria 15453
53 Ga0097620_100090069 3300006931 Bacteria 3118
54 Ga0105240_10000110 3300009093 Bacteria 171018
55 Ga0105240_10003498 3300009093 Bacteria 24350
56 Ga0105240_10020486 3300009093 Bacteria 8818
57 Ga0105240_10079005 3300009093 Bacteria 4050
58 Ga0111539_10005812 3300009094 Bacteria 15945
59 Ga0111539_10008752 3300009094 Bacteria 12839
60 Ga0105245_10019805 3300009098 Bacteria 5898
61 Ga0105241_10001439 3300009174 Bacteria 18231
62 Ga0105241_10002422 3300009174 Bacteria 13998
63 Ga0105241_10012762 3300009174 Bacteria 6165
64 Ga0105248_10008178 3300009177 Bacteria 11488
65 Ga0105248_10042366 3300009177 Bacteria 5106
66 Ga0105248_10054110 3300009177 Bacteria 4501
67 Ga0105237_10024717 3300009545 Bacteria 6145
68 Ga0105238_10000022 3300009551 Bacteria 204310
69 Ga0105238_10015298 3300009551 Bacteria 7771
70 Ga0105238_10017477 3300009551 Bacteria 7290
71 Ga0105238_10066959 3300009551 Bacteria 3593
72 Ga0105238_10094223 3300009551 Bacteria 2982
73 Ga0105239_10006929 3300010375 Bacteria 13073
74 Ga0105239_10039106 3300010375 Bacteria 5197
75 Ga0105239_10113196 3300010375 Bacteria 3009
76 Ga0105246_10017934 3300011119 Bacteria 4505
77 Ga0157370_10000001 3300013104 Bacteria 529517
78 Ga0157370_10026297 3300013104 Bacteria 5748
79 Ga0157369_10000017 3300013105 Bacteria 246520
80 Ga0157369_10003868 3300013105 Bacteria 17787
81 Ga0157369_10004551 3300013105 Bacteria 16308
82 Ga0157369_10098467 3300013105 Bacteria 3119
83 Ga0163162_10026000 3300013306 Bacteria 5785
84 Ga0157372_10000019 3300013307 Bacteria 209591
85 Ga0157372_10003217 3300013307 Bacteria 17626
86 Ga0157372_10011598 3300013307 Bacteria 9380
87 Ga0157372_10012636 3300013307 Bacteria 8994
88 Ga0157372_10196634 3300013307 Bacteria 2336
89 Ga0157375_10018796 3300013308 Archaea 6272
90 Ga0157380_10053037 3300014326 Unclassified 3213
91 Ga0209676_1000488 3300025292 Bacteria 64408
92 Ga0209050_1003729 3300025298 Bacteria 10954
93 Ga0209257_1000023 3300025304 Bacteria 753019
94 Ga0207705_10003109 3300025909 Bacteria 12661
95 Ga0207654_10000059 3300025911 Bacteria 75594
96 Ga0207654_10000148 3300025911 Bacteria 44438
97 Ga0207654_10060809 3300025911 Bacteria 2208
98 Ga0207695_10000026 3300025913 Bacteria 624558
99 Ga0207695_10000096 3300025913 Bacteria 265048
100 Ga0207695_10000168 3300025913 Bacteria 193087
101 Ga0207671_10000022 3300025914 Bacteria 277803
102 Ga0207671_10065939 3300025914 Bacteria 2694
103 Ga0207649_10026733 3300025920 Unclassified 3379
104 Ga0207652_10069627 3300025921 Unclassified 3055
105 Ga0207694_10000009 3300025924 Bacteria 460687
106 Ga0207694_10040703 3300025924 Unclassified 3579
107 Ga0207687_10102366 3300025927 Bacteria 2110
108 Ga0207690_10019149 3300025932 Unclassified 4208
109 Ga0207711_10103373 3300025941 Bacteria 2523
110 Ga0207689_10034727 3300025942 Bacteria 4187
111 Ga0207667_10009885 3300025949 Bacteria 11194
112 Ga0207667_10013408 3300025949 Bacteria 9378
113 Ga0207667_10030231 3300025949 Bacteria 5862
114 Ga0207667_10032783 3300025949 Bacteria 5592
115 Ga0207658_10060546 3300025986 Bacteria 2825
116 Ga0207703_10009253 3300026035 Bacteria 7748
117 Ga0207639_10000065 3300026041 Bacteria 98610
118 Ga0207702_10031572 3300026078 Bacteria 4414
119 Ga0207702_10121992 3300026078 Bacteria 2334
120 Ga0207674_10002547 3300026116 Bacteria 22963
121 Ga0207674_10006526 3300026116 Bacteria 13713
122 Ga0207674_10141563 3300026116 Unclassified 2364
123 Ga0207698_10000018 3300026142 Bacteria 176540
124 Ga0207698_10000028 3300026142 Bacteria 117250
125 Ga0265337_1000712 3300028556 Bacteria 17502
126 Ga0265337_1007381 3300028556 Bacteria 4118
127 Ga0265326_10000826 3300028558 Bacteria 11392
128 Ga0265319_1000263 3300028563 Bacteria 39781
129 Ga0265319_1000554 3300028563 Bacteria 25340
130 Ga0265319_1011639 3300028563 Bacteria 3590
131 Ga0265334_10001748 3300028573 Bacteria 10384
132 Ga0265318_10002056 3300028577 Bacteria 11056
133 Ga0265323_10000779 3300028653 Bacteria 17056
134 Ga0265323_10000978 3300028653 Bacteria 14880
135 Ga0265322_10000061 3300028654 Bacteria 53080
136 Ga0265336_10000326 3300028666 Bacteria 31895
137 Ga0307515_10000557 3300028794 Bacteria 87964
138 Ga0265338_10000106 3300028800 Bacteria 153890
139 Ga0265338_10000608 3300028800 Bacteria 62768
140 Ga0265338_10019224 3300028800 Bacteria 7266
141 Ga0265338_10019832 3300028800 Bacteria 7107
142 Ga0265324_10000352 3300029957 Bacteria 33340
143 Ga0265330_10000649 3300031235 Bacteria 22386
144 Ga0265332_10000152 3300031238 Bacteria 55802
145 Ga0265328_10002743 3300031239 Bacteria 7875
146 Ga0265320_10000941 3300031240 Bacteria 21710
147 Ga0265320_10008462 3300031240 Bacteria 6297
148 Ga0265329_10001178 3300031242 Bacteria 12860
149 Ga0265339_10000667 3300031249 Bacteria 26496
150 Ga0265327_10035122 3300031251 Bacteria 2775
151 Ga0265316_10000312 3300031344 Bacteria 54031
152 Ga0265316_10009902 3300031344 Bacteria 8732
153 Ga0265316_10053301 3300031344 Bacteria 3170
154 Ga0307509_10009914 3300031507 Bacteria 11775
155 Ga0307509_10033144 3300031507 Bacteria 5687
156 Ga0265313_10001566 3300031595 Bacteria 21224
157 Ga0265313_10016167 3300031595 Bacteria 4302
158 Ga0265314_10000493 3300031711 Bacteria 51198
159 Ga0265342_10000365 3300031712 Bacteria 49944
160 Ga0265342_10003706 3300031712 Bacteria 12386
161 Ga0307405_10054248 3300031731 Bacteria 2501
162 Ga0307518_10005381 3300031838 Bacteria 9147
163 Ga0451577_0001063 3300042876 Bacteria 39602
164 Ga0451577_0016283 3300042876 Bacteria 6890
165 Ga0453683_0000499 3300044673 Bacteria 44878
166 Ga0453683_0096970 3300044673 Bacteria 1850
167 Ga0466963_0009625 3300044694 Bacteria 5825
168 Ga0453684_0000039 3300044712 Bacteria 697730
169 Ga0453684_0004908 3300044712 Bacteria 27376
170 Ga0453684_0025163 3300044712 Bacteria 8653
171 Ga0453684_0100626 3300044712 Bacteria 3537
172 Ga0451576_0010137 3300045051 Bacteria 10847
173 Ga0451576_0017784 3300045051 Bacteria 7810
174 Ga0451576_0021462 3300045051 Bacteria 7018
175 Ga0451576_0058075 3300045051 Bacteria 4044
176 Ga0451576_0064996 3300045051 Unclassified 3799
177 Ga0495638_0000001 3300046460 Bacteria 1114121
178 Ga0495625_0090458 3300046660 Bacteria 2117
179 Ga0495686_0006957 3300047472 Bacteria 8548
180 Ga0496115_0005335 3300048918 Bacteria 9351
181 Ga0496115_0083417 3300048918 Unclassified 2605
182 Ga0501300_001231 3300049523 Bacteria 3885
183 Ga0501034_0308743 3300049571 Bacteria 1517
184 Ga0501072_0181840 3300049588 Bacteria 1677
185 Ga0501076_0085428 3300049592 Bacteria 2536
186 Ga0501236_000056 3300049670 Bacteria 9949
187 Ga0501257_000331 3300049686 Bacteria 9135
188 Ga0501257_006548 3300049686 Bacteria 2586
189 Ga0501225_0006386 3300049705 Bacteria 3441
190 Ga0501080_0132084 3300049742 Bacteria 2312
191 Ga0501264_001003 3300049761 Bacteria 3425
192 Ga0501035_0184576 3300049822 Bacteria 1796
193 nmdc:mga08y16_11148_c1 3300050511 Bacteria 9439
194 nmdc:mga08y16_11710_c1 3300050511 Bacteria 9216
195 Ga0500655_007674 3300053133 Bacteria 1943
196 Ga0500616_0000009 3300053153 Bacteria 779095
197 Ga0500622_0000048 3300053156 Bacteria 147112
198 Ga0500622_0000052 3300053156 Bacteria 145201
199 Ga0500622_0001448 3300053156 Bacteria 19019
200 Ga0530510_0009599 3300061734 Bacteria 6786

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049588 Ga0501072_0181840 Ga0501072_0181840_349_1662 408
2 3300046660 Ga0495625_0090458 Ga0495625_0090458_759_2099 409
3 3300049571 Ga0501034_0308743 Ga0501034_0308743_16_1272 412
4 3300005539 Ga0068853_100000074 Ga0068853_10000007466 419
5 3300005563 Ga0068855_100001215 Ga0068855_1000012153 419
6 3300005614 Ga0068856_100007688 Ga0068856_1000076886 419
7 3300005616 Ga0068852_100000073 Ga0068852_10000007343 419
8 3300009093 Ga0105240_10020486 Ga0105240_100204865 419
9 3300009545 Ga0105237_10024717 Ga0105237_100247172 419
10 3300009551 Ga0105238_10000022 Ga0105238_1000002270 419
11 3300025911 Ga0207654_10000148 Ga0207654_1000014820 419
12 3300025913 Ga0207695_10000168 Ga0207695_10000168134 419
13 3300025914 Ga0207671_10000022 Ga0207671_10000022161 419
14 3300025924 Ga0207694_10000009 Ga0207694_10000009121 419
15 3300025949 Ga0207667_10013408 Ga0207667_100134083 419
16 3300026041 Ga0207639_10000065 Ga0207639_1000006577 419
17 3300026142 Ga0207698_10000028 Ga0207698_1000002839 419
18 3300009174 Ga0105241_10002422 Ga0105241_100024227 421
19 3300010375 Ga0105239_10006929 Ga0105239_100069292 421
20 3300005563 Ga0068855_100001514 Ga0068855_10000151421 428
21 3300005614 Ga0068856_100031505 Ga0068856_1000315053 428
22 3300013105 Ga0157369_10003868 Ga0157369_1000386813 428
23 3300013307 Ga0157372_10012636 Ga0157372_100126362 428
24 3300025949 Ga0207667_10030231 Ga0207667_100302312 428
25 3300005329 Ga0070683_100111594 Ga0070683_1001115942 433
26 3300005539 Ga0068853_100021150 Ga0068853_1000211503 433
27 3300005539 Ga0068853_100143287 Ga0068853_1001432872 433
28 3300005577 Ga0068857_100001254 Ga0068857_10000125417 433
29 3300013306 Ga0163162_10026000 Ga0163162_100260004 433
30 3300026116 Ga0207674_10002547 Ga0207674_1000254721 433
31 3300044694 Ga0466963_0009625 Ga0466963_0009625_1283_2809 435
32 3300049686 Ga0501257_006548 Ga0501257_006548_24_1334 436
33 3300005334 Ga0068869_100013612 Ga0068869_1000136122 437
34 3300005617 Ga0068859_100003777 Ga0068859_1000037778 437
35 3300005843 Ga0068860_100034519 Ga0068860_1000345194 437
36 3300005844 Ga0068862_100076890 Ga0068862_1000768902 437
37 3300006237 Ga0097621_100012391 Ga0097621_1000123914 437
38 3300006931 Ga0097620_100003777 Ga0097620_1000037778 437
39 3300009177 Ga0105248_10042366 Ga0105248_100423663 437
40 3300011119 Ga0105246_10017934 Ga0105246_100179343 437
41 3300013308 Ga0157375_10018796 Ga0157375_100187963 437
42 3300025942 Ga0207689_10034727 Ga0207689_100347273 437
43 3300025986 Ga0207658_10060546 Ga0207658_100605462 437
44 3300026035 Ga0207703_10009253 Ga0207703_100092532 437
45 3300026078 Ga0207702_10031572 Ga0207702_100315722 437
46 3300026116 Ga0207674_10006526 Ga0207674_1000652612 437
47 3300009174 Ga0105241_10001439 Ga0105241_1000143915 438
48 3300025911 Ga0207654_10000059 Ga0207654_1000005925 438
49 3300005548 Ga0070665_100017930 Ga0070665_1000179304 441
50 3300005617 Ga0068859_100090071 Ga0068859_1000900712 441
51 3300006931 Ga0097620_100090069 Ga0097620_1000900692 441
52 3300009093 Ga0105240_10003498 Ga0105240_1000349819 441
53 3300009177 Ga0105248_10008178 Ga0105248_100081788 441
54 3300009551 Ga0105238_10017477 Ga0105238_100174773 441
55 3300010375 Ga0105239_10039106 Ga0105239_100391063 441
56 3300025911 Ga0207654_10060809 Ga0207654_100608091 441
57 3300025913 Ga0207695_10000096 Ga0207695_10000096113 441
58 3300025927 Ga0207687_10102366 Ga0207687_101023662 441
59 3300025941 Ga0207711_10103373 Ga0207711_101033731 441
60 3300005578 Ga0068854_100029212 Ga0068854_1000292122 443
61 3300005614 Ga0068856_100035489 Ga0068856_1000354894 443
62 3300009174 Ga0105241_10012762 Ga0105241_100127623 443
63 3300009551 Ga0105238_10094223 Ga0105238_100942232 443
64 3300013307 Ga0157372_10011598 Ga0157372_100115988 443
65 3300005344 Ga0070661_100074932 Ga0070661_1000749322 446
66 3300005338 Ga0068868_100114489 Ga0068868_1001144892 453
67 3300010375 Ga0105239_10113196 Ga0105239_101131962 453
68 3300025914 Ga0207671_10065939 Ga0207671_100659392 454
69 3300005329 Ga0070683_100054336 Ga0070683_1000543362 456
70 3300005535 Ga0070684_100043750 Ga0070684_1000437502 456
71 3300005616 Ga0068852_100000212 Ga0068852_10000021228 456
72 3300009093 Ga0105240_10000110 Ga0105240_1000011043 456
73 3300013104 Ga0157370_10000001 Ga0157370_10000001131 456
74 3300013105 Ga0157369_10000017 Ga0157369_1000001785 456
75 3300025913 Ga0207695_10000026 Ga0207695_10000026436 456
76 3300026142 Ga0207698_10000018 Ga0207698_1000001873 456
77 3300048918 Ga0496115_0005335 Ga0496115_0005335_7106_8614 456
78 3300009093 Ga0105240_10079005 Ga0105240_100790051 457
79 3300009098 Ga0105245_10019805 Ga0105245_100198051 457
80 3300009551 Ga0105238_10066959 Ga0105238_100669592 457
81 3300013105 Ga0157369_10098467 Ga0157369_100984672 457
82 3300013307 Ga0157372_10196634 Ga0157372_101966341 457
83 3300013307 Ga0157372_10000019 Ga0157372_1000001954 458
84 3300048918 Ga0496115_0083417 Ga0496115_0083417_405_1913 458
85 3300006880 Ga0075429_100067503 Ga0075429_1000675032 460
86 3300031251 Ga0265327_10035122 Ga0265327_100351222 463
87 3300005327 Ga0070658_10034757 Ga0070658_100347572 467
88 3300005344 Ga0070661_100007502 Ga0070661_1000075024 467
89 3300005366 Ga0070659_100011056 Ga0070659_1000110562 467
90 3300005530 Ga0070679_100071630 Ga0070679_1000716303 467
91 3300005563 Ga0068855_100033733 Ga0068855_1000337333 467
92 3300005577 Ga0068857_100083829 Ga0068857_1000838292 467
93 3300009551 Ga0105238_10015298 Ga0105238_100152983 467
94 3300013105 Ga0157369_10004551 Ga0157369_1000455113 467
95 3300013307 Ga0157372_10003217 Ga0157372_100032178 467
96 3300025909 Ga0207705_10003109 Ga0207705_1000310912 467
97 3300025920 Ga0207649_10026733 Ga0207649_100267332 467
98 3300025921 Ga0207652_10069627 Ga0207652_100696272 467
99 3300025924 Ga0207694_10040703 Ga0207694_100407032 467
100 3300025932 Ga0207690_10019149 Ga0207690_100191492 467
101 3300025949 Ga0207667_10032783 Ga0207667_100327832 467
102 3300026116 Ga0207674_10141563 Ga0207674_101415632 467
103 3300005327 Ga0070658_10029382 Ga0070658_100293822 469
104 3300045051 Ga0451576_0064996 Ga0451576_0064996_1487_3031 470
105 3300005563 Ga0068855_100008602 Ga0068855_1000086023 471
106 3300025949 Ga0207667_10009885 Ga0207667_100098859 471
107 3300045051 Ga0451576_0010137 Ga0451576_0010137_8545_10113 479
108 3300049592 Ga0501076_0085428 Ga0501076_0085428_208_1812 481
109 3300049742 Ga0501080_0132084 Ga0501080_0132084_623_2104 481
110 3300049822 Ga0501035_0184576 Ga0501035_0184576_137_1618 481
111 3300061734 Ga0530510_0009599 Ga0530510_0009599_3494_5098 481
112 3300005329 Ga0070683_100087520 Ga0070683_1000875202 483
113 3300005544 Ga0070686_100001515 Ga0070686_1000015155 483
114 3300009177 Ga0105248_10054110 Ga0105248_100541101 483
115 iso_pu_bacteria 2802429296 2804849511 483
116 iso_pu_bacteria 2954380949 2954389884 483
117 iso_pu_bacteria 3006493962 3006495716 483
118 iso_pu_bacteria 8025413630 8025414565 483
119 3300047472 Ga0495686_0006957 Ga0495686_0006957_505_2019 487
120 3300014326 Ga0157380_10053037 Ga0157380_100530372 489
121 3300031507 Ga0307509_10009914 Ga0307509_100099144 489
122 3300031838 Ga0307518_10005381 Ga0307518_100053816 489
123 3300028558 Ga0265326_10000826 Ga0265326_1000082610 490
124 3300028563 Ga0265319_1000263 Ga0265319_100026319 490
125 3300028653 Ga0265323_10000779 Ga0265323_1000077919 490
126 3300028654 Ga0265322_10000061 Ga0265322_1000006120 490
127 3300028800 Ga0265338_10019832 Ga0265338_100198325 490
128 3300029957 Ga0265324_10000352 Ga0265324_1000035210 490
129 3300031235 Ga0265330_10000649 Ga0265330_1000064920 490
130 3300031238 Ga0265332_10000152 Ga0265332_1000015234 490
131 3300031239 Ga0265328_10002743 Ga0265328_100027434 490
132 3300031240 Ga0265320_10000941 Ga0265320_1000094118 490
133 3300031242 Ga0265329_10001178 Ga0265329_100011782 490
134 3300031249 Ga0265339_10000667 Ga0265339_1000066715 490
135 3300031344 Ga0265316_10000312 Ga0265316_1000031246 490
136 3300031711 Ga0265314_10000493 Ga0265314_1000049320 490
137 3300031712 Ga0265342_10000365 Ga0265342_100003658 490
138 3300031507 Ga0307509_10033144 Ga0307509_100331444 493
139 3300003316 rootH1_10059906 rootH1_100599062 501
140 3300028556 Ga0265337_1000712 Ga0265337_10007127 502
141 3300028556 Ga0265337_1007381 Ga0265337_10073812 502
142 3300028563 Ga0265319_1000554 Ga0265319_10005547 502
143 3300028563 Ga0265319_1011639 Ga0265319_10116392 502
144 3300028573 Ga0265334_10001748 Ga0265334_1000174810 502
145 3300028577 Ga0265318_10002056 Ga0265318_1000205610 502
146 3300028666 Ga0265336_10000326 Ga0265336_1000032617 502
147 3300028800 Ga0265338_10000106 Ga0265338_1000010625 502
148 3300028800 Ga0265338_10000608 Ga0265338_1000060821 502
149 3300028800 Ga0265338_10019224 Ga0265338_100192242 502
150 3300031240 Ga0265320_10008462 Ga0265320_100084622 502
151 3300031344 Ga0265316_10009902 Ga0265316_100099025 502
152 3300031595 Ga0265313_10001566 Ga0265313_100015662 502
153 3300031595 Ga0265313_10016167 Ga0265313_100161672 502
154 3300031712 Ga0265342_10003706 Ga0265342_100037064 502
155 3300049523 Ga0501300_001231 Ga0501300_001231_1114_2634 506
156 3300003794 Ga0055531_10000796 Ga0055531_1000079613 507
157 3300025304 Ga0209257_1000023 Ga0209257_100002325 507
158 3300042876 Ga0451577_0001063 Ga0451577_0001063_20305_21906 508
159 3300044712 Ga0453684_0000039 Ga0453684_0000039_225782_227383 508
160 3300044673 Ga0453683_0096970 Ga0453683_0096970_220_1824 511
161 3300044712 Ga0453684_0100626 Ga0453684_0100626_1780_3384 511
162 3300045051 Ga0451576_0058075 Ga0451576_0058075_786_2417 514
163 3300053156 Ga0500622_0001448 Ga0500622_0001448_7692_9302 514
164 iso_pu_bacteria 2911138879 2911139218 516
165 iso_pu_bacteria 2522125168 2522549284 518
166 3300044673 Ga0453683_0000499 Ga0453683_0000499_229_1827 519
167 3300044712 Ga0453684_0025163 Ga0453684_0025163_6756_8354 519
168 3300045051 Ga0451576_0021462 Ga0451576_0021462_1570_3168 519
169 3300028794 Ga0307515_10000557 Ga0307515_1000055715 520
170 3300028653 Ga0265323_10000978 Ga0265323_100009789 521
171 3300031344 Ga0265316_10053301 Ga0265316_100533012 521
172 3300003781 Ga0055536_1003023 Ga0055536_10030235 522
173 3300005262 Ga0065165_1000478 Ga0065165_100047861 522
174 3300025292 Ga0209676_1000488 Ga0209676_100048841 522
175 3300031731 Ga0307405_10054248 Ga0307405_100542482 522
176 3300003322 rootL2_10084883 rootL2_100848832 526
177 3300013104 Ga0157370_10026297 Ga0157370_100262972 527
178 3300053153 Ga0500616_0000009 Ga0500616_0000009_229908_231521 531
179 3300042876 Ga0451577_0016283 Ga0451577_0016283_2019_3617 532
180 3300044712 Ga0453684_0004908 Ga0453684_0004908_13430_15028 532
181 3300045051 Ga0451576_0017784 Ga0451576_0017784_3976_5574 532
182 iso_pu_bacteria 2910245624 2910249820 534
183 iso_pu_bacteria 2839989709 2839992360 535
184 3300049705 Ga0501225_0006386 Ga0501225_0006386_1136_2746 536
185 3300003320 rootH2_10002538 rootH2_100025383 537
186 3300003322 rootL2_10014834 rootL2_100148346 537
187 3300003322 rootL2_10021916 rootL2_100219164 537
188 3300003322 rootL2_10163783 rootL2_101637832 537
189 3300003323 rootH1_10003782 rootH1_1000378228 537
190 3300006844 Ga0075428_100003647 Ga0075428_1000036478 537
191 3300009094 Ga0111539_10005812 Ga0111539_1000581214 537
192 3300009094 Ga0111539_10008752 Ga0111539_1000875211 537
193 3300025298 Ga0209050_1003729 Ga0209050_10037297 537
194 3300046460 Ga0495638_0000001 Ga0495638_0000001_502041_503654 537
195 3300049670 Ga0501236_000056 Ga0501236_000056_4295_5908 537
196 3300049686 Ga0501257_000331 Ga0501257_000331_281_1894 537
197 3300049761 Ga0501264_001003 Ga0501264_001003_1544_3157 537
198 3300050511 nmdc:mga08y16_11148_c1 nmdc:mga08y16_11148_c1_1343_2956 537
199 3300050511 nmdc:mga08y16_11710_c1 nmdc:mga08y16_11710_c1_4768_6381 537
200 3300053133 Ga0500655_007674 Ga0500655_007674_148_1761 537
201 3300053156 Ga0500622_0000048 Ga0500622_0000048_111724_113337 537
202 3300053156 Ga0500622_0000052 Ga0500622_0000052_111550_113163 537
203 3300003316 rootH1_10001870 rootH1_100018702 539
204 3300003322 rootL2_10009529 rootL2_1000952910 539
205 3300003323 rootH1_10010466 rootH1_1001046658 539
206 3300005262 Ga0065165_1001120 Ga0065165_10011204 539
207 3300026078 Ga0207702_10121992 Ga0207702_101219922 539

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

137

485

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hum-assembly1.cif.gz_D structure of the photosynthetic complex i from thermosynechococcus elongatus 0.9314 6 529
6nby-assembly1.cif.gz_D t.elongatus ndh (composite model) 0.931 6 528
7ar7-assembly1.cif.gz_M cryo-em structure of arabidopsis thaliana complex-i (open conformation) 0.9305 6 525
8e73-assembly1.cif.gz_4M vigna radiata supercomplex i+iii2 (full bridge) 0.9302 6 525
7aqq-assembly1.cif.gz_M cryo-em structure of arabidopsis thaliana complex-i (membrane core) 0.9289 6 292
ID Description Score Start End Superfamily
af_M1FQK6_1_136_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9012 7 135 1.20.1070.10
af_P26288_1_130_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8786 1 133 1.20.1070.10
af_P26288_1_130_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8658 1 133 1.20.1070.10
af_M1FQK6_1_136_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.819 7 135 1.20.1070.10
af_P0AFE8_1_132_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8153 5 133 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A7V9NRB8-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.9745 268 534 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A520ZVG9-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.974 249 535 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A660ZPY6-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.9735 140 526 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A7J4UY86-F1-model_v4 NADH-quinone oxidoreductase subunit M (EC 1.6.5.-) 0.9718 262 526 GO:0003954
GO:0008137
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A099DBI5-F1-model_v4 deleted 0.9677 301 436

Feature Viewer

pLDDT pTM Quality
93.87 0.93 High
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Predicted Structure (AlphaFold2)

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Map