F318319

General Info

Members Datasets Scaffolds Average Seq Length
208 153 208 145

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0362772|Ga0496104_0362772_759_1238
Length 159
Sequence MASGSSNDDGAGGVINPLTSFLGTGWSFPPEFNPVPGEVRMLAAEDDIESSLRLLFSTATGERLFNPKYGLDMRGVLFEPMSTTLRTLLEERVKIAILFYEPRINPLALSVDSPDPGSGTLLITLDYEVRATNSRFNLVFPFYLSGGNEVSTTVGIPGP

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
52 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
53 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
82 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
83 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
84 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
85 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
87 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
88 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
93 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
94 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
98 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
99 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
100 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
101 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
102 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
107 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
108 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
111 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
146 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
147 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
148 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
149 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
150 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.25
Nodule 0
Rhizoplane 1.92
Rhizosphere 88.94
Stem 0
Stem Tuber 0
Unclassified 2.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10519074 3300005293 Bacteria 765
2 Ga0065707_10508753 3300005295 Bacteria 751
3 Ga0070690_100905369 3300005330 Unclassified 690
4 Ga0070680_100540575 3300005336 Unclassified 998
5 Ga0068868_100159971 3300005338 Bacteria 1859
6 Ga0070668_100363134 3300005347 Unclassified 1228
7 Ga0070673_100045941 3300005364 Bacteria 3390
8 Ga0070688_100134106 3300005365 Unclassified 1674
9 Ga0070659_100027775 3300005366 Bacteria 4363
10 Ga0070681_10048838 3300005458 Bacteria 4227
11 Ga0070685_10438488 3300005466 Bacteria 912
12 Ga0070706_100088977 3300005467 Unclassified 2863
13 Ga0070707_100546133 3300005468 Bacteria 1121
14 Ga0070698_100261985 3300005471 Viruses 1661
15 Ga0070679_100414194 3300005530 Unclassified 1293
16 Ga0070684_100905646 3300005535 Unclassified 826
17 Ga0068855_100108227 3300005563 Bacteria 3193
18 Ga0068855_101465748 3300005563 Unclassified 702
19 Ga0070664_100123360 3300005564 Bacteria 2270
20 Ga0068857_100086760 3300005577 Unclassified 2799
21 Ga0070702_100082888 3300005615 Bacteria 1925
22 Ga0068859_100972512 3300005617 Bacteria 932
23 Ga0068864_100366023 3300005618 Bacteria 1363
24 Ga0068863_100007746 3300005841 Bacteria 10503
25 Ga0068863_100159280 3300005841 Bacteria 2162
26 Ga0068863_100184463 3300005841 Unclassified 2003
27 Ga0068863_101313262 3300005841 Unclassified 730
28 Ga0068858_102527548 3300005842 Bacteria 507
29 Ga0068860_100001332 3300005843 Bacteria 26852
30 Ga0068862_100727864 3300005844 Bacteria 963
31 Ga0068862_101011687 3300005844 Unclassified 822
32 Ga0081455_10369257 3300005937 Unclassified 1006
33 Ga0081455_10757369 3300005937 Unclassified 613
34 Ga0075366_10075249 3300006195 Bacteria 2014
35 Ga0075366_10181386 3300006195 Bacteria 1279
36 Ga0075370_10173018 3300006353 Bacteria 1270
37 Ga0075428_100000510 3300006844 Bacteria 39415
38 Ga0075428_100021869 3300006844 Bacteria 7082
39 Ga0075428_100031687 3300006844 Bacteria 5841
40 Ga0075430_100000227 3300006846 Bacteria 39046
41 Ga0075430_100002872 3300006846 Bacteria 14413
42 Ga0075431_100001177 3300006847 Bacteria 23582
43 Ga0075431_100103428 3300006847 Bacteria 2940
44 Ga0075431_100634975 3300006847 Unclassified 1049
45 Ga0075429_100005762 3300006880 Bacteria 10695
46 Ga0075429_100053857 3300006880 Bacteria 3500
47 Ga0075429_100088313 3300006880 Unclassified 2702
48 Ga0075436_100001110 3300006914 Bacteria 18201
49 Ga0075436_100100985 3300006914 Bacteria 2009
50 Ga0097620_100972545 3300006931 Bacteria 932
51 Ga0075435_100078219 3300007076 Unclassified 2712
52 Ga0075435_100103611 3300007076 Bacteria 2360
53 Ga0105240_10003991 3300009093 Bacteria 22738
54 Ga0105240_10008950 3300009093 Bacteria 14234
55 Ga0111539_12581830 3300009094 Unclassified 589
56 Ga0105245_10027149 3300009098 Bacteria 5043
57 Ga0114129_10000951 3300009147 Bacteria 37833
58 Ga0114129_10005753 3300009147 Bacteria 17564
59 Ga0105243_11638086 3300009148 Unclassified 671
60 Ga0105242_10563958 3300009176 Unclassified 1094
61 Ga0105248_11626298 3300009177 Bacteria 732
62 Ga0105237_10008131 3300009545 Bacteria 11389
63 Ga0105237_10769654 3300009545 Viruses 969
64 Ga0105238_10175833 3300009551 Bacteria 2117
65 Ga0105249_12096382 3300009553 Bacteria 638
66 Ga0105239_10000424 3300010375 Bacteria 61556
67 Ga0105246_11234394 3300011119 Bacteria 690
68 Ga0157369_11992537 3300013105 Unclassified 589
69 Ga0163162_10364094 3300013306 Bacteria 1579
70 Ga0182006_1040398 3300015261 Bacteria 1836
71 Ga0213871_10026162 3300021441 Bacteria 1491
72 Ga0209129_1020840 3300025258 Bacteria 1212
73 Ga0207684_10048556 3300025910 Bacteria 3600
74 Ga0207684_10054064 3300025910 Unclassified 3407
75 Ga0207707_10025648 3300025912 Bacteria 5156
76 Ga0207695_10015889 3300025913 Bacteria 8842
77 Ga0207695_10066073 3300025913 Bacteria 3716
78 Ga0207671_10006290 3300025914 Bacteria 10605
79 Ga0207660_10514825 3300025917 Unclassified 971
80 Ga0207652_10246854 3300025921 Unclassified 1610
81 Ga0207646_10429590 3300025922 Bacteria 1192
82 Ga0207694_10402293 3300025924 Bacteria 1138
83 Ga0207690_10116788 3300025932 Bacteria 1930
84 Ga0207670_10015828 3300025936 Bacteria 4516
85 Ga0207711_11028817 3300025941 Bacteria 763
86 Ga0207679_10069706 3300025945 Bacteria 2647
87 Ga0207667_10112961 3300025949 Bacteria 2801
88 Ga0207667_11306389 3300025949 Unclassified 702
89 Ga0207668_10700445 3300025972 Unclassified 890
90 Ga0207677_10116168 3300026023 Bacteria 2003
91 Ga0207703_11399502 3300026035 Bacteria 673
92 Ga0207639_11508609 3300026041 Unclassified 631
93 Ga0207641_10013960 3300026088 Bacteria 6586
94 Ga0207641_10207041 3300026088 Unclassified 1812
95 Ga0207676_10309190 3300026095 Bacteria 1446
96 Ga0207674_10159692 3300026116 Unclassified 2209
97 Ga0207698_10353171 3300026142 Unclassified 1389
98 Ga0268264_10004436 3300028381 Bacteria 11970
99 Ga0307515_10451370 3300028794 Bacteria 901
100 Ga0265332_10006678 3300031238 Bacteria 5225
101 Ga0265327_10000143 3300031251 Bacteria 156870
102 Ga0307509_10025471 3300031507 Bacteria 6605
103 Ga0307408_100406001 3300031548 Bacteria 1171
104 Ga0307516_10000535 3300031730 Bacteria 50751
105 Ga0307510_10309686 3300033180 Bacteria 1039
106 Ga0373928_0006284 3300035084 Bacteria 2284
107 Ga0373949_0000008 3300035090 Bacteria 72391
108 Ga0373923_0467047 3300035111 Bacteria 613
109 Ga0373956_0194667 3300035119 Bacteria 960
110 Ga0373957_0317052 3300035120 Bacteria 663
111 Ga0373960_0015261 3300035121 Bacteria 1958
112 Ga0373937_0789835 3300036401 Bacteria 897
113 Ga0373925_0137792 3300037068 Bacteria 1908
114 Ga0395905_1473440 3300037471 Unclassified 585
115 Ga0436360_0660509 3300039438 Bacteria 1105
116 Ga0451577_0000010 3300042876 Bacteria 616686
117 Ga0451577_0059953 3300042876 Bacteria 3392
118 Ga0451577_0172631 3300042876 Bacteria 1948
119 Ga0451577_0386475 3300042876 Bacteria 1270
120 Ga0451577_0477841 3300042876 Unclassified 1131
121 Ga0451577_0869698 3300042876 Bacteria 812
122 Ga0453683_0003186 3300044673 Bacteria 12205
123 Ga0453683_0029586 3300044673 Bacteria 3463
124 Ga0453683_0133043 3300044673 Bacteria 1568
125 Ga0453683_0381329 3300044673 Bacteria 908
126 Ga0453684_0000191 3300044712 Bacteria 267816
127 Ga0453684_0014668 3300044712 Bacteria 12496
128 Ga0453684_0014788 3300044712 Bacteria 12437
129 Ga0453684_0051557 3300044712 Bacteria 5391
130 Ga0453684_0130513 3300044712 Bacteria 3016
131 Ga0453684_0253469 3300044712 Bacteria 2020
132 Ga0453684_0259865 3300044712 Bacteria 1990
133 Ga0453684_1229408 3300044712 Bacteria 785
134 Ga0451576_0000088 3300045051 Bacteria 234139
135 Ga0451576_0000486 3300045051 Bacteria 87761
136 Ga0451576_0094380 3300045051 Unclassified 3111
137 Ga0451576_0214094 3300045051 Bacteria 2012
138 Ga0451576_1620185 3300045051 Unclassified 671
139 Ga0495580_0000002 3300046472 Bacteria 121311
140 Ga0495610_0112094 3300046512 Bacteria 1207
141 Ga0495620_0036198 3300046515 Bacteria 2210
142 Ga0495637_0019049 3300046520 Bacteria 3177
143 Ga0495648_0211614 3300046524 Bacteria 963
144 Ga0495598_0001251 3300046537 Bacteria 4947
145 Ga0495625_0555902 3300046660 Bacteria 694
146 Ga0495661_0251036 3300046665 Bacteria 903
147 Ga0495588_0107136 3300046674 Unclassified 1471
148 Ga0495588_0414421 3300046674 Bacteria 707
149 Ga0495669_0492131 3300046684 Unclassified 596
150 Ga0495671_0022246 3300046692 Bacteria 3323
151 Ga0495660_0416678 3300046810 Bacteria 586
152 Ga0495672_0029180 3300047320 Bacteria 3478
153 Ga0495676_0862512 3300047321 Bacteria 581
154 Ga0495681_0165355 3300047470 Bacteria 919
155 Ga0496104_0362772 3300048907 Bacteria 1361
156 Ga0496109_0657487 3300048912 Bacteria 985
157 Ga0496112_1271290 3300048915 Viruses 652
158 Ga0496115_0640697 3300048918 Viruses 841
159 Ga0496122_0087524 3300048925 Unclassified 2140
160 Ga0496123_0234851 3300048926 Unclassified 915
161 Ga0501033_0231095 3300049570 Bacteria 1314
162 Ga0501036_0183861 3300049572 Bacteria 1759
163 Ga0501039_0067270 3300049575 Bacteria 2782
164 Ga0501040_0234689 3300049576 Bacteria 1306
165 Ga0501041_0026862 3300049577 Bacteria 3466
166 Ga0501046_0159718 3300049580 Bacteria 1696
167 Ga0501048_0051214 3300049582 Bacteria 2940
168 Ga0501068_0180110 3300049584 Bacteria 1336
169 Ga0501070_0280968 3300049586 Unclassified 1358
170 Ga0501072_0155809 3300049588 Bacteria 1821
171 Ga0501073_0166374 3300049589 Unclassified 1527
172 Ga0501074_0211049 3300049590 Bacteria 1383
173 Ga0501074_0631008 3300049590 Bacteria 757
174 Ga0501075_0006313 3300049591 Bacteria 8145
175 Ga0501076_0037169 3300049592 Bacteria 3817
176 Ga0501077_0026943 3300049593 Bacteria 3649
177 Ga0501239_009271 3300049672 Bacteria 1066
178 Ga0501081_0084093 3300049743 Bacteria 2231
179 Ga0501083_0139733 3300049744 Bacteria 1586
180 Ga0501035_0318505 3300049822 Bacteria 1307
181 Ga0501045_0123104 3300049824 Bacteria 1926
182 nmdc:mga0k408_89357_c1 3300050493 Bacteria 1809
183 nmdc:mga05p37_1377_c1 3300050507 Bacteria 28279
184 nmdc:mga05p37_805_c1 3300050507 Bacteria 35037
185 nmdc:mga09592_120004_c1 3300050508 Unclassified 2258
186 nmdc:mga09592_4474_c1 3300050508 Bacteria 11302
187 nmdc:mga09592_5658_c1 3300050508 Bacteria 10190
188 nmdc:mga0qj67_17518_c1 3300050509 Bacteria 5448
189 nmdc:mga0qj67_20776_c1 3300050509 Bacteria 5028
190 nmdc:mga0qj67_652016_c1 3300050509 Unclassified 840
191 nmdc:mga06r32_421823_c1 3300050510 Bacteria 1315
192 nmdc:mga06r32_4317_c1 3300050510 Bacteria 12725
193 nmdc:mga06r32_596306_c1 3300050510 Bacteria 1076
194 nmdc:mga06r32_98672_c1 3300050510 Bacteria 2864
195 nmdc:mga0rr50_67663_c1 3300050513 Unclassified 2714
196 nmdc:mga0rr50_745654_c1 3300050513 Bacteria 836
197 nmdc:mga08x19_717_c1 3300050514 Bacteria 21228
198 Ga0500610_0014422 3300053079 Bacteria 3708
199 Ga0500610_0032484 3300053079 Bacteria 2657
200 Ga0500610_0201165 3300053079 Bacteria 959
201 Ga0500555_006802 3300053103 Bacteria 3249
202 Ga0500593_000384 3300053117 Bacteria 17564
203 Ga0500607_000368 3300053121 Bacteria 43100
204 Ga0500577_0480269 3300053142 Bacteria 543
205 Ga0500634_0385658 3300053161 Bacteria 522
206 Ga0501084_0026947 3300054114 Bacteria 4801
207 Ga0501082_0002083 3300060353 Bacteria 17620
208 Ga0530510_0038934 3300061734 Bacteria 3433

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048925 Ga0496122_0087524 Ga0496122_0087524_1535_1930 129
2 3300048926 Ga0496123_0234851 Ga0496123_0234851_91_486 129
3 3300005937 Ga0081455_10757369 Ga0081455_107573692 130
4 3300006844 Ga0075428_100031687 Ga0075428_1000316872 130
5 3300006880 Ga0075429_100088313 Ga0075429_1000883134 130
6 3300049570 Ga0501033_0231095 Ga0501033_0231095_586_984 130
7 3300049572 Ga0501036_0183861 Ga0501036_0183861_858_1256 130
8 3300049575 Ga0501039_0067270 Ga0501039_0067270_1511_1909 130
9 3300049576 Ga0501040_0234689 Ga0501040_0234689_268_666 130
10 3300049577 Ga0501041_0026862 Ga0501041_0026862_397_795 130
11 3300049580 Ga0501046_0159718 Ga0501046_0159718_626_1024 130
12 3300049582 Ga0501048_0051214 Ga0501048_0051214_1788_2186 130
13 3300049584 Ga0501068_0180110 Ga0501068_0180110_32_430 130
14 3300049586 Ga0501070_0280968 Ga0501070_0280968_270_668 130
15 3300049588 Ga0501072_0155809 Ga0501072_0155809_798_1196 130
16 3300049589 Ga0501073_0166374 Ga0501073_0166374_804_1202 130
17 3300049590 Ga0501074_0211049 Ga0501074_0211049_111_509 130
18 3300049591 Ga0501075_0006313 Ga0501075_0006313_771_1169 130
19 3300049592 Ga0501076_0037169 Ga0501076_0037169_794_1192 130
20 3300049593 Ga0501077_0026943 Ga0501077_0026943_2468_2866 130
21 3300049743 Ga0501081_0084093 Ga0501081_0084093_794_1192 130
22 3300049744 Ga0501083_0139733 Ga0501083_0139733_673_1071 130
23 3300049822 Ga0501035_0318505 Ga0501035_0318505_669_1067 130
24 3300049824 Ga0501045_0123104 Ga0501045_0123104_874_1272 130
25 3300054114 Ga0501084_0026947 Ga0501084_0026947_1500_1898 130
26 3300060353 Ga0501082_0002083 Ga0501082_0002083_1526_1924 130
27 3300061734 Ga0530510_0038934 Ga0530510_0038934_1579_1977 130
28 3300006844 Ga0075428_100000510 Ga0075428_10000051024 131
29 3300006846 Ga0075430_100000227 Ga0075430_10000022724 131
30 3300006847 Ga0075431_100001177 Ga0075431_10000117712 131
31 3300006880 Ga0075429_100005762 Ga0075429_10000576213 131
32 3300009147 Ga0114129_10000951 Ga0114129_1000095111 131
33 3300050507 nmdc:mga05p37_1377_c1 nmdc:mga05p37_1377_c1_12686_13087 131
34 3300050508 nmdc:mga09592_5658_c1 nmdc:mga09592_5658_c1_389_790 131
35 3300050509 nmdc:mga0qj67_17518_c1 nmdc:mga0qj67_17518_c1_3368_3769 131
36 3300050510 nmdc:mga06r32_4317_c1 nmdc:mga06r32_4317_c1_10517_10918 131
37 3300005937 Ga0081455_10369257 Ga0081455_103692572 133
38 3300006847 Ga0075431_100634975 Ga0075431_1006349752 133
39 3300031507 Ga0307509_10025471 Ga0307509_100254714 133
40 3300033180 Ga0307510_10309686 Ga0307510_103096863 133
41 3300046537 Ga0495598_0001251 Ga0495598_0001251_3560_3967 133
42 3300050509 nmdc:mga0qj67_652016_c1 nmdc:mga0qj67_652016_c1_322_729 133
43 3300050510 nmdc:mga06r32_596306_c1 nmdc:mga06r32_596306_c1_266_673 133
44 3300005577 Ga0068857_100086760 Ga0068857_1000867602 134
45 3300026116 Ga0207674_10159692 Ga0207674_101596922 134
46 3300047320 Ga0495672_0029180 Ga0495672_0029180_271_681 134
47 3300013306 Ga0163162_10364094 Ga0163162_103640942 136
48 3300005844 Ga0068862_100727864 Ga0068862_1007278642 137
49 3300006195 Ga0075366_10181386 Ga0075366_101813862 137
50 3300009553 Ga0105249_12096382 Ga0105249_120963821 137
51 3300042876 Ga0451577_0869698 Ga0451577_0869698_323_760 137
52 3300044673 Ga0453683_0029586 Ga0453683_0029586_1383_1802 137
53 3300044712 Ga0453684_1229408 Ga0453684_1229408_167_604 137
54 3300045051 Ga0451576_0000486 Ga0451576_0000486_10075_10494 137
55 3300046512 Ga0495610_0112094 Ga0495610_0112094_315_746 137
56 3300046515 Ga0495620_0036198 Ga0495620_0036198_1629_2060 137
57 3300046520 Ga0495637_0019049 Ga0495637_0019049_210_641 137
58 3300046524 Ga0495648_0211614 Ga0495648_0211614_382_813 137
59 3300046660 Ga0495625_0555902 Ga0495625_0555902_229_660 137
60 3300046665 Ga0495661_0251036 Ga0495661_0251036_333_764 137
61 3300046674 Ga0495588_0107136 Ga0495588_0107136_992_1423 137
62 3300046692 Ga0495671_0022246 Ga0495671_0022246_259_690 137
63 3300046810 Ga0495660_0416678 Ga0495660_0416678_49_480 137
64 3300047321 Ga0495676_0862512 Ga0495676_0862512_12_443 137
65 3300047470 Ga0495681_0165355 Ga0495681_0165355_137_568 137
66 3300053079 Ga0500610_0014422 Ga0500610_0014422_1098_1529 137
67 3300053079 Ga0500610_0032484 Ga0500610_0032484_1932_2363 137
68 3300053079 Ga0500610_0201165 Ga0500610_0201165_374_805 137
69 3300053117 Ga0500593_000384 Ga0500593_000384_157_588 137
70 3300053121 Ga0500607_000368 Ga0500607_000368_27174_27605 137
71 3300053142 Ga0500577_0480269 Ga0500577_0480269_101_532 137
72 3300053161 Ga0500634_0385658 Ga0500634_0385658_51_482 137
73 3300006847 Ga0075431_100103428 Ga0075431_1001034282 138
74 3300006914 Ga0075436_100100985 Ga0075436_1001009853 138
75 3300007076 Ga0075435_100103611 Ga0075435_1001036113 138
76 3300035121 Ga0373960_0015261 Ga0373960_0015261_1330_1752 138
77 3300050510 nmdc:mga06r32_421823_c1 nmdc:mga06r32_421823_c1_260_682 138
78 3300050513 nmdc:mga0rr50_745654_c1 nmdc:mga0rr50_745654_c1_37_459 138
79 3300005295 Ga0065707_10508753 Ga0065707_105087531 139
80 3300005338 Ga0068868_100159971 Ga0068868_1001599713 139
81 3300005563 Ga0068855_100108227 Ga0068855_1001082273 139
82 3300005563 Ga0068855_101465748 Ga0068855_1014657482 139
83 3300005841 Ga0068863_100159280 Ga0068863_1001592802 139
84 3300005843 Ga0068860_100001332 Ga0068860_1000013329 139
85 3300006844 Ga0075428_100021869 Ga0075428_1000218694 139
86 3300006846 Ga0075430_100002872 Ga0075430_1000028725 139
87 3300006880 Ga0075429_100053857 Ga0075429_1000538572 139
88 3300009093 Ga0105240_10003991 Ga0105240_100039913 139
89 3300009093 Ga0105240_10008950 Ga0105240_100089504 139
90 3300009147 Ga0114129_10005753 Ga0114129_100057532 139
91 3300009545 Ga0105237_10008131 Ga0105237_1000813111 139
92 3300009551 Ga0105238_10175833 Ga0105238_101758333 139
93 3300010375 Ga0105239_10000424 Ga0105239_1000042411 139
94 3300013105 Ga0157369_11992537 Ga0157369_119925372 139
95 3300025910 Ga0207684_10054064 Ga0207684_100540644 139
96 3300025913 Ga0207695_10015889 Ga0207695_100158893 139
97 3300025913 Ga0207695_10066073 Ga0207695_100660732 139
98 3300025914 Ga0207671_10006290 Ga0207671_100062902 139
99 3300025924 Ga0207694_10402293 Ga0207694_104022932 139
100 3300025949 Ga0207667_10112961 Ga0207667_101129613 139
101 3300025949 Ga0207667_11306389 Ga0207667_113063892 139
102 3300026023 Ga0207677_10116168 Ga0207677_101161682 139
103 3300026035 Ga0207703_11399502 Ga0207703_113995022 139
104 3300026041 Ga0207639_11508609 Ga0207639_115086091 139
105 3300026142 Ga0207698_10353171 Ga0207698_103531712 139
106 3300028381 Ga0268264_10004436 Ga0268264_100044363 139
107 3300028794 Ga0307515_10451370 Ga0307515_104513702 139
108 3300031238 Ga0265332_10006678 Ga0265332_100066782 139
109 3300035111 Ga0373923_0467047 Ga0373923_0467047_86_532 139
110 3300035119 Ga0373956_0194667 Ga0373956_0194667_437_883 139
111 3300035120 Ga0373957_0317052 Ga0373957_0317052_71_517 139
112 3300036401 Ga0373937_0789835 Ga0373937_0789835_329_775 139
113 3300044712 Ga0453684_0130513 Ga0453684_0130513_953_1378 139
114 3300046674 Ga0495588_0414421 Ga0495588_0414421_233_679 139
115 3300050507 nmdc:mga05p37_805_c1 nmdc:mga05p37_805_c1_31668_32099 139
116 3300050508 nmdc:mga09592_120004_c1 nmdc:mga09592_120004_c1_742_1173 139
117 3300050508 nmdc:mga09592_4474_c1 nmdc:mga09592_4474_c1_8791_9237 139
118 3300050509 nmdc:mga0qj67_20776_c1 nmdc:mga0qj67_20776_c1_3929_4375 139
119 3300050510 nmdc:mga06r32_98672_c1 nmdc:mga06r32_98672_c1_159_605 139
120 3300006353 Ga0075370_10173018 Ga0075370_101730182 140
121 3300015261 Ga0182006_1040398 Ga0182006_10403982 140
122 3300025258 Ga0209129_1020840 Ga0209129_10208402 140
123 3300031251 Ga0265327_10000143 Ga0265327_1000014338 140
124 3300048912 Ga0496109_0657487 Ga0496109_0657487_280_723 140
125 3300005347 Ga0070668_100363134 Ga0070668_1003631342 141
126 3300021441 Ga0213871_10026162 Ga0213871_100261622 141
127 3300025972 Ga0207668_10700445 Ga0207668_107004452 141
128 3300039438 Ga0436360_0660509 Ga0436360_0660509_69_536 141
129 3300005336 Ga0070680_100540575 Ga0070680_1005405752 142
130 3300005530 Ga0070679_100414194 Ga0070679_1004141943 142
131 3300005841 Ga0068863_100184463 Ga0068863_1001844632 142
132 3300005841 Ga0068863_101313262 Ga0068863_1013132621 142
133 3300025917 Ga0207660_10514825 Ga0207660_105148253 142
134 3300025921 Ga0207652_10246854 Ga0207652_102468542 142
135 3300026088 Ga0207641_10207041 Ga0207641_102070412 142
136 3300005468 Ga0070707_100546133 Ga0070707_1005461333 143
137 3300025922 Ga0207646_10429590 Ga0207646_104295903 143
138 3300006195 Ga0075366_10075249 Ga0075366_100752492 144
139 3300035084 Ga0373928_0006284 Ga0373928_0006284_645_1088 144
140 3300037068 Ga0373925_0137792 Ga0373925_0137792_892_1338 144
141 3300037471 Ga0395905_1473440 Ga0395905_1473440_82_531 144
142 3300046472 Ga0495580_0000002 Ga0495580_0000002_36900_37364 144
143 3300050493 nmdc:mga0k408_89357_c1 nmdc:mga0k408_89357_c1_457_900 144
144 3300005330 Ga0070690_100905369 Ga0070690_1009053692 145
145 3300005364 Ga0070673_100045941 Ga0070673_1000459413 145
146 3300005615 Ga0070702_100082888 Ga0070702_1000828883 145
147 3300005842 Ga0068858_102527548 Ga0068858_1025275481 145
148 3300006914 Ga0075436_100001110 Ga0075436_1000011102 145
149 3300007076 Ga0075435_100078219 Ga0075435_1000782193 145
150 3300009148 Ga0105243_11638086 Ga0105243_116380862 145
151 3300011119 Ga0105246_11234394 Ga0105246_112343942 145
152 3300031548 Ga0307408_100406001 Ga0307408_1004060012 145
153 3300050513 nmdc:mga0rr50_67663_c1 nmdc:mga0rr50_67663_c1_429_881 145
154 3300050514 nmdc:mga08x19_717_c1 nmdc:mga08x19_717_c1_5199_5651 145
155 3300053103 Ga0500555_006802 Ga0500555_006802_2470_2925 145
156 3300009094 Ga0111539_12581830 Ga0111539_125818301 146
157 3300031730 Ga0307516_10000535 Ga0307516_1000053512 146
158 3300042876 Ga0451577_0172631 Ga0451577_0172631_416_871 146
159 3300045051 Ga0451576_1620185 Ga0451576_1620185_25_474 146
160 3300049672 Ga0501239_009271 Ga0501239_009271_575_1024 147
161 3300005365 Ga0070688_100134106 Ga0070688_1001341062 148
162 3300005466 Ga0070685_10438488 Ga0070685_104384882 148
163 3300005467 Ga0070706_100088977 Ga0070706_1000889773 148
164 3300005471 Ga0070698_100261985 Ga0070698_1002619852 148
165 3300005617 Ga0068859_100972512 Ga0068859_1009725122 148
166 3300005618 Ga0068864_100366023 Ga0068864_1003660232 148
167 3300005841 Ga0068863_100007746 Ga0068863_1000077463 148
168 3300005844 Ga0068862_101011687 Ga0068862_1010116871 148
169 3300006931 Ga0097620_100972545 Ga0097620_1009725452 148
170 3300009098 Ga0105245_10027149 Ga0105245_100271498 148
171 3300009176 Ga0105242_10563958 Ga0105242_105639582 148
172 3300009177 Ga0105248_11626298 Ga0105248_116262982 148
173 3300025910 Ga0207684_10048556 Ga0207684_100485562 148
174 3300025936 Ga0207670_10015828 Ga0207670_100158282 148
175 3300025941 Ga0207711_11028817 Ga0207711_110288172 148
176 3300026088 Ga0207641_10013960 Ga0207641_100139604 148
177 3300026095 Ga0207676_10309190 Ga0207676_103091903 148
178 3300035090 Ga0373949_0000008 Ga0373949_0000008_59154_59615 148
179 3300042876 Ga0451577_0000010 Ga0451577_0000010_581243_581698 148
180 3300042876 Ga0451577_0059953 Ga0451577_0059953_448_903 148
181 3300042876 Ga0451577_0386475 Ga0451577_0386475_461_916 148
182 3300042876 Ga0451577_0477841 Ga0451577_0477841_540_995 148
183 3300044673 Ga0453683_0003186 Ga0453683_0003186_6087_6542 148
184 3300044673 Ga0453683_0133043 Ga0453683_0133043_762_1217 148
185 3300044673 Ga0453683_0381329 Ga0453683_0381329_366_821 148
186 3300044712 Ga0453684_0000191 Ga0453684_0000191_34989_35444 148
187 3300044712 Ga0453684_0014668 Ga0453684_0014668_1695_2150 148
188 3300044712 Ga0453684_0014788 Ga0453684_0014788_6481_6936 148
189 3300044712 Ga0453684_0051557 Ga0453684_0051557_3282_3737 148
190 3300044712 Ga0453684_0253469 Ga0453684_0253469_195_650 148
191 3300044712 Ga0453684_0259865 Ga0453684_0259865_1365_1820 148
192 3300045051 Ga0451576_0000088 Ga0451576_0000088_220773_221228 148
193 3300045051 Ga0451576_0094380 Ga0451576_0094380_540_995 148
194 3300045051 Ga0451576_0214094 Ga0451576_0214094_1365_1820 148
195 3300046684 Ga0495669_0492131 Ga0495669_0492131_68_523 148
196 3300048907 Ga0496104_0362772 Ga0496104_0362772_759_1238 148
197 3300048918 Ga0496115_0640697 Ga0496115_0640697_30_509 148
198 3300005366 Ga0070659_100027775 Ga0070659_1000277753 150
199 3300005458 Ga0070681_10048838 Ga0070681_100488383 150
200 3300005535 Ga0070684_100905646 Ga0070684_1009056461 150
201 3300005564 Ga0070664_100123360 Ga0070664_1001233602 150
202 3300009545 Ga0105237_10769654 Ga0105237_107696541 150
203 3300025912 Ga0207707_10025648 Ga0207707_100256483 150
204 3300025932 Ga0207690_10116788 Ga0207690_101167883 150
205 3300025945 Ga0207679_10069706 Ga0207679_100697063 150
206 3300048915 Ga0496112_1271290 Ga0496112_1271290_42_512 150
207 3300049590 Ga0501074_0631008 Ga0501074_0631008_184_639 151
208 3300005293 Ga0065715_10519074 Ga0065715_105190741 154

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04965

GPW_gp25

Baseplate wedge protein gp25

42

134

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6j0n-assembly1.cif.gz_D cryo-em structure of an extracellular contractile injection system, baseplate in extended state, refined in c6 symmetry 0.8617 9 129
6rao-assembly1.cif.gz_H cryo-em structure of the anti-feeding prophage (afp) baseplate, 6-fold symmetrised 0.8599 13 129
6u5b-assembly1.cif.gz_a cryoem structure of pyocin r2 - precontracted - baseplate 0.8253 29 126
5iw9-assembly1.cif.gz_B structure of bacteriophage t4 gp25, sheath polymerization initiator 0.8219 44 125
6u5k-assembly1.cif.gz_B cryoem structure of pyocin r2 - postcontracted - baseplate 0.8136 29 126
ID Description Score Start End Superfamily
5iw9B00 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.8226 44 125 3.10.450.40
af_Q5PNP1_322_475_1.10.167.10 Mainly Alpha;Orthogonal Bundle;Regulator of G-protein Signalling 4; domain 2;Regulator of G-protein Signalling 4, domain 2 0.8118 72 97 1.10.167.10
2ia7A00 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.7853 36 144 3.10.450.40
2ia7A00 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.7719 36 144 3.10.450.40
af_A0A2R8QIB8_42_131_2.10.50.10 Mainly Beta;Ribbon;Tumor Necrosis Factor Receptor, subunit A; domain 2;Tumor Necrosis Factor Receptor, subunit A, domain 2 0.7694 100 124 2.10.50.10
ID Description Score Start End GO Terms
AF-A0A7K3XK95-F1-model_v4 GPW/gp25 family protein 0.9608 37 129
AF-A0A7W7AUQ8-F1-model_v4 deleted 0.95 41 129
AF-A0A5P2STB1-F1-model_v4 deleted 0.936 36 125
AF-A0A6G3XJJ0-F1-model_v4 GPW/gp25 family protein 0.9296 41 122
AF-A0A1H3JDF8-F1-model_v4 IraD/Gp25-like domain-containing protein 0.9277 41 129

Feature Viewer

pLDDT pTM Quality
70.88 0.62 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map