F318482

General Info

Members Datasets Scaffolds Average Seq Length
208 133 416 667

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221645|2644253804
Length 746
Sequence KFLAAVLAAALMSAPPARAAAANDSAAAAASISAAAATTATAATAAVVTEHVRAELLAHAPQGLQPGKPLWLGLAIEHQPHWHTYWKNPGDSGLPTTLSWTLPPGFAAGEIAWPTPQHLPLGPLLNYGYEGRVLLPVPVTVPAGYAGKTLGVKLHAEWLVCKEICLPESGDFHLTIPVDAPVSAHQALFDAARAAAPLALPQASASARVDGKALAMEIRGLPAAAQGQPLRLMVEDAGVIDYAAKVDQRWADGLLTLRVPLSAQRSESPAALHIVLKAASQPAGWALPVTIAGGWPAPGSAGTSAAAPAAAPAAAPAPATVPASAGSAPAFLLTLLFAFLGGAILNLMPCVFPVLSLKLVSLAQHGSEREQARNQAIAGGLAYTAGVVLSFAALAGLLLALRAGGEQLGWGFQLQSPLVVFLLAALFTLIGLNLAGAFEFGTMLPSALASFRARNRLLDDALSGALAVAVASPCTAPFMGAAMGAALTESAPKALAIFVVLGLGMAAPYLAASCWPGLARVLPKPGAWMQRFKVLMAFPMFATVVWLAWVLGQQTGIDGMTAALAMLVALAFAAWTLGTPVRRPRSRVLLGGAGLLTLAAAVGTAGPLLRAGDGSVGAANSAANGAKSASLAGARWSAWSETAVAQARAAGQPVFVDFTAAWCVTCQFNKRAALADASLLADFEARNVVLLRADWTRRDPAITQQLARLGRNGVPVYALYAPGDAPPQLLSELLTVEQVRTALNQL

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
17 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
18 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
19 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
33 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
38 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
39 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
41 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
43 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
69 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
70 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
71 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
72 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
73 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
84 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
85 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
86 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
87 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
88 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
89 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
90 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
91 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
101 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
105 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
106 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
118 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
123 2643221645 Massilia sp. Root351 Isolate Unclassified
124 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
125 2643221609 Acidovorax sp. Root217 Isolate Unclassified
126 2643221611 Acidovorax sp. Root219 Isolate Unclassified
127 2643221658 Variovorax sp. Root411 Isolate Unclassified
128 2643221672 Variovorax sp. Root434 Isolate Unclassified
129 2738541307 Variovorax sp. GV008 Isolate Unclassified
130 2738543012 Acidovorax sp. CF301 Isolate Unclassified
131 2816332133 Acidovorax radicis 2721A Isolate Unclassified
132 2885198086 Variovorax sp. 679 Isolate Unclassified
133 2885211737 Variovorax sp. 553 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.23
Metatranscriptomes 0.48
Isolates 5.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 45.67
Nodule 0.96
Rhizoplane 0.96
Rhizosphere 40.38
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1006918 3300002773 Bacteria 2999
2 JGI25150J39212_1003005 3300002774 Bacteria 4060
3 JGI25159J45721_1006308 3300002987 Bacteria 3569
4 JGI25151J46595_10005382 3300003187 Bacteria 6614
5 JGI25151J46595_10005476 3300003187 Bacteria 6555
6 JGI25151J46595_10018542 3300003187 Bacteria 2984
7 JGI25153J46596_10016301 3300003215 Bacteria 2984
8 rootL2_10050507 3300003322 Bacteria 5576
9 rootH1_10020503 3300003323 Bacteria 7498
10 JGI25160J50197_1012276 3300003354 Bacteria 2984
11 Ga0006562J51391_1032489 3300003578 Bacteria 4219
12 Ga0055535_1001468 3300003761 Bacteria 11874
13 Ga0055542_1000631 3300003762 Bacteria 29605
14 Ga0055526_1004704 3300003771 Bacteria 8104
15 Ga0055526_1004706 3300003771 Bacteria 8101
16 Ga0055526_1015925 3300003771 Bacteria 2984
17 Ga0055526_1015999 3300003771 Bacteria 2971
18 Ga0055537_1000162 3300003773 Bacteria 50062
19 Ga0055537_1000519 3300003773 Bacteria 22711
20 Ga0055537_1005239 3300003773 Bacteria 3520
21 Ga0055524_1014074 3300003775 Bacteria 2984
22 Ga0055524_1014153 3300003775 Bacteria 2971
23 Ga0055536_1001623 3300003781 Bacteria 13395
24 Ga0055534_1000128 3300003784 Bacteria 56698
25 Ga0055534_1001348 3300003784 Bacteria 9862
26 Ga0055534_1004898 3300003784 Bacteria 3745
27 Ga0055534_1006357 3300003784 Bacteria 2984
28 Ga0055528_1001595 3300003790 Bacteria 13443
29 Ga0055528_1011450 3300003790 Bacteria 3520
30 Ga0055530_10001784 3300003791 Bacteria 14958
31 Ga0055540_1002174 3300003792 Bacteria 10667
32 Ga0055540_1007986 3300003792 Bacteria 3884
33 Ga0055531_10017730 3300003794 Bacteria 2986
34 Ga0055543_1004192 3300004625 Bacteria 3997
35 Ga0055543_1006743 3300004625 Bacteria 2734
36 Ga0065165_1000034 3300005262 Bacteria 214644
37 Ga0065165_1008088 3300005262 Bacteria 5014
38 Ga0065165_1014555 3300005262 Bacteria 3048
39 Ga0070662_100016176 3300005457 Bacteria 5005
40 Ga0070707_100041925 3300005468 Bacteria 4382
41 Ga0070665_100010431 3300005548 Bacteria 9400
42 Ga0068855_100068749 3300005563 Bacteria 4123
43 Ga0070664_100005548 3300005564 Bacteria 10132
44 Ga0068852_100010287 3300005616 Bacteria 6981
45 Ga0068851_10012033 3300005834 Bacteria 4072
46 Ga0075366_10010358 3300006195 Bacteria 5234
47 Ga0075366_10018529 3300006195 Bacteria 4020
48 Ga0075370_10002822 3300006353 Bacteria 8151
49 Ga0099826_10000122 3300006948 Bacteria 35250
50 Ga0105244_10003120 3300009036 Bacteria 12078
51 Ga0105243_10001495 3300009148 Bacteria 20477
52 Ga0105243_10004220 3300009148 Bacteria 11387
53 Ga0105246_10032764 3300011119 Bacteria 3449
54 Ga0157370_10007224 3300013104 Bacteria 12121
55 Ga0182007_10002199 3300015262 Bacteria 9896
56 Ga0183362_10014 3300015683 Bacteria 40122
57 Ga0209258_100143 3300025242 Bacteria 165551
58 Ga0207425_1005449 3300025245 Bacteria 3627
59 Ga0207425_1005618 3300025245 Bacteria 3546
60 Ga0209148_1000007 3300025254 Bacteria 1592273
61 Ga0209129_1000117 3300025258 Bacteria 140115
62 Ga0209129_1005479 3300025258 Bacteria 4473
63 Ga0209565_1000101 3300025263 Bacteria 129092
64 Ga0209565_1000229 3300025263 Bacteria 61660
65 Ga0209565_1000668 3300025263 Bacteria 21725
66 Ga0209565_1001466 3300025263 Bacteria 10342
67 Ga0209673_1000424 3300025273 Bacteria 73591
68 Ga0209673_1000463 3300025273 Bacteria 68460
69 Ga0209673_1000820 3300025273 Bacteria 41055
70 Ga0209673_1001727 3300025273 Bacteria 18363
71 Ga0209130_1000016 3300025284 Bacteria 395540
72 Ga0209130_1000722 3300025284 Bacteria 29240
73 Ga0209130_1000729 3300025284 Bacteria 29024
74 Ga0209675_1000121 3300025291 Bacteria 107684
75 Ga0209675_1000186 3300025291 Bacteria 68471
76 Ga0209675_1001356 3300025291 Bacteria 14417
77 Ga0209675_1001451 3300025291 Bacteria 13681
78 Ga0209675_1005264 3300025291 Bacteria 5461
79 Ga0209676_1000112 3300025292 Bacteria 208328
80 Ga0209676_1000325 3300025292 Bacteria 91840
81 Ga0209676_1001277 3300025292 Bacteria 26082
82 Ga0209676_1008328 3300025292 Bacteria 4641
83 Ga0209025_1000208 3300025294 Bacteria 140415
84 Ga0209025_1000233 3300025294 Bacteria 130512
85 Ga0209025_1000500 3300025294 Bacteria 75244
86 Ga0209025_1001849 3300025294 Bacteria 24860
87 Ga0209025_1016723 3300025294 Bacteria 4298
88 Ga0209025_1023820 3300025294 Bacteria 3183
89 Ga0209564_1000108 3300025295 Bacteria 213699
90 Ga0209564_1000212 3300025295 Bacteria 133160
91 Ga0209564_1000492 3300025295 Bacteria 65596
92 Ga0209564_1004221 3300025295 Bacteria 8947
93 Ga0209564_1008064 3300025295 Bacteria 5276
94 Ga0209758_1000330 3300025297 Bacteria 89233
95 Ga0209758_1007116 3300025297 Bacteria 7739
96 Ga0209050_1000052 3300025298 Bacteria 351785
97 Ga0209050_1000662 3300025298 Bacteria 53092
98 Ga0209256_1000101 3300025299 Bacteria 200246
99 Ga0209256_1000168 3300025299 Bacteria 132040
100 Ga0209256_1000275 3300025299 Bacteria 90061
101 Ga0207426_1000086 3300025302 Bacteria 292089
102 Ga0207426_1000207 3300025302 Bacteria 140594
103 Ga0209051_1000105 3300025303 Bacteria 160893
104 Ga0209051_1000186 3300025303 Bacteria 109900
105 Ga0209051_1000427 3300025303 Bacteria 57606
106 Ga0209051_1000537 3300025303 Bacteria 46665
107 Ga0209051_1013012 3300025303 Bacteria 3984
108 Ga0209257_1000037 3300025304 Bacteria 612915
109 Ga0209257_1000516 3300025304 Bacteria 67246
110 Ga0209257_1004116 3300025304 Bacteria 11614
111 Ga0209257_1007503 3300025304 Bacteria 6561
112 Ga0207656_10009787 3300025321 Bacteria 3566
113 Ga0207681_10060301 3300025923 Bacteria 2604
114 Ga0207706_10036395 3300025933 Bacteria 4371
115 Ga0207709_10000391 3300025935 Bacteria 43481
116 Ga0207709_10006786 3300025935 Bacteria 6406
117 Ga0207691_10068363 3300025940 Bacteria 3209
118 Ga0207658_10048553 3300025986 Bacteria 3113
119 Ga0207639_10006808 3300026041 Bacteria 7780
120 Ga0207683_10107375 3300026121 Bacteria 2497
121 Ga0209970_1000170 3300027614 Bacteria 10178
122 Ga0209282_1001114 3300027666 Bacteria 14324
123 Ga0268266_10010221 3300028379 Bacteria 8222
124 Ga0307515_10000013 3300028794 Bacteria 568456
125 Ga0307515_10000873 3300028794 Bacteria 69237
126 Ga0307515_10055238 3300028794 Bacteria 5808
127 Ga0314311_1042083 3300030733 Bacteria 3152
128 Ga0316180_1001675 3300030736 Bacteria 6006
129 Ga0316183_1082965 3300030742 Bacteria 5217
130 Ga0316181_1155521 3300030744 Bacteria 4282
131 Ga0265330_10000012 3300031235 Bacteria 180837
132 Ga0265330_10010501 3300031235 Bacteria 4362
133 Ga0265332_10000012 3300031238 Bacteria 272641
134 Ga0265332_10000450 3300031238 Bacteria 28909
135 Ga0265332_10001722 3300031238 Bacteria 11925
136 Ga0265325_10002458 3300031241 Bacteria 12491
137 Ga0307513_10000066 3300031456 Bacteria 141617
138 Ga0307513_10010549 3300031456 Bacteria 11563
139 Ga0307513_10108121 3300031456 Bacteria 2783
140 Ga0307408_100012570 3300031548 Bacteria 5611
141 Ga0265314_10000029 3300031711 Bacteria 272506
142 Ga0265314_10003994 3300031711 Bacteria 13951
143 Ga0307516_10017165 3300031730 Bacteria 7557
144 Ga0395899_0063478 3300037312 Bacteria 2717
145 Ga0395900_0005840 3300037418 Bacteria 12858
146 Ga0395898_0052228 3300037466 Bacteria 3993
147 Ga0395905_0000430 3300037471 Bacteria 58720
148 Ga0395905_0002286 3300037471 Bacteria 21499
149 Ga0395905_0037799 3300037471 Bacteria 4531
150 Ga0395905_0059936 3300037471 Bacteria 3558
151 Ga0395905_0081269 3300037471 Bacteria 3037
152 Ga0439436_0000149 3300041404 Bacteria 16201
153 Ga0439466_0008656 3300041411 Bacteria 3834
154 Ga0439465_0000587 3300041413 Bacteria 10986
155 Ga0439431_0000351 3300041997 Bacteria 9687
156 Ga0439433_0001265 3300041999 Bacteria 5221
157 Ga0439432_000358 3300042006 Bacteria 16718
158 Ga0439449_0001607 3300042007 Bacteria 8856
159 Ga0439452_002627 3300042010 Bacteria 6549
160 Ga0450908_001383 3300042184 Bacteria 4700
161 Ga0451577_0000388 3300042876 Bacteria 81462
162 Ga0451577_0003923 3300042876 Bacteria 16072
163 Ga0451577_0049381 3300042876 Bacteria 3757
164 Ga0466965_0012693 3300044683 Bacteria 3967
165 Ga0453684_0000187 3300044712 Bacteria 272378
166 Ga0453684_0008025 3300044712 Bacteria 19106
167 Ga0453684_0079513 3300044712 Bacteria 4099
168 Ga0466960_0015380 3300044901 Bacteria 3297
169 Ga0451576_0094163 3300045051 Bacteria 3115
170 Ga0495650_0004759 3300046471 Bacteria 9125
171 Ga0495650_0004978 3300046471 Bacteria 8859
172 Ga0495639_0003069 3300046475 Bacteria 7267
173 Ga0495645_0004391 3300046543 Bacteria 9635
174 Ga0495656_0001967 3300046615 Bacteria 6775
175 Ga0495604_0064088 3300047317 Bacteria 2802
176 Ga0496104_0011079 3300048907 Bacteria 8068
177 Ga0496105_0004423 3300048908 Bacteria 10581
178 Ga0496116_0014427 3300048919 Bacteria 6310
179 Ga0496117_0048135 3300048920 Bacteria 3049
180 Ga0496118_0037223 3300048921 Bacteria 3920
181 Ga0496122_0033099 3300048925 Bacteria 4259
182 Ga0496124_0036674 3300048927 Bacteria 4274
183 Ga0501031_0007256 3300049568 Bacteria 7232
184 Ga0501032_0021923 3300049569 Bacteria 4434
185 Ga0501033_0001821 3300049570 Bacteria 18590
186 Ga0501037_0023594 3300049573 Bacteria 4549
187 Ga0501038_0030574 3300049574 Bacteria 4763
188 Ga0501039_0019143 3300049575 Bacteria 5252
189 Ga0501043_0056047 3300049579 Bacteria 3095
190 Ga0501047_0019398 3300049581 Bacteria 6524
191 Ga0501198_000003 3300049649 Bacteria 175301
192 Ga0501222_000001 3300049662 Bacteria 307689
193 Ga0501035_0037005 3300049822 Bacteria 4421
194 Ga0501035_0060399 3300049822 Bacteria 3374
195 Ga0501044_0008380 3300049823 Bacteria 11336
196 nmdc:mga0k408_1773_c1 3300050493 Bacteria 11578
197 Ga0500608_000358 3300053122 Bacteria 17626
198 2644253804 2643221645 Bacteria 7207331
199 2513231819 2513020051 Bacteria 6053213
200 2644061622 2643221609 Bacteria 6756331
201 2644075154 2643221611 Bacteria 6820941
202 2644325684 2643221658 Bacteria 6064537
203 2644400936 2643221672 Bacteria 6322190
204 2738882549 2738541307 Bacteria 8606193
205 2739243318 2738543012 Bacteria 7115078
206 2816473896 2816332133 Bacteria 7249298
207 2885202094 2885198086 Bacteria 7212419
208 2885215196 2885211737 Bacteria 7212420
209 JGI25152J39213_1006918
210 JGI25150J39212_1003005
211 JGI25159J45721_1006308
212 JGI25151J46595_10005382
213 JGI25151J46595_10005476
214 JGI25151J46595_10018542
215 JGI25153J46596_10016301
216 rootL2_10050507
217 rootH1_10020503
218 JGI25160J50197_1012276
219 Ga0006562J51391_1032489
220 Ga0055535_1001468
221 Ga0055542_1000631
222 Ga0055526_1004704
223 Ga0055526_1004706
224 Ga0055526_1015925
225 Ga0055526_1015999
226 Ga0055537_1000162
227 Ga0055537_1000519
228 Ga0055537_1005239
229 Ga0055524_1014074
230 Ga0055524_1014153
231 Ga0055536_1001623
232 Ga0055534_1000128
233 Ga0055534_1001348
234 Ga0055534_1004898
235 Ga0055534_1006357
236 Ga0055528_1001595
237 Ga0055528_1011450
238 Ga0055530_10001784
239 Ga0055540_1002174
240 Ga0055540_1007986
241 Ga0055531_10017730
242 Ga0055543_1004192
243 Ga0055543_1006743
244 Ga0065165_1000034
245 Ga0065165_1008088
246 Ga0065165_1014555
247 Ga0070662_100016176
248 Ga0070707_100041925
249 Ga0070665_100010431
250 Ga0068855_100068749
251 Ga0070664_100005548
252 Ga0068852_100010287
253 Ga0068851_10012033
254 Ga0075366_10010358
255 Ga0075366_10018529
256 Ga0075370_10002822
257 Ga0099826_10000122
258 Ga0105244_10003120
259 Ga0105243_10001495
260 Ga0105243_10004220
261 Ga0105246_10032764
262 Ga0157370_10007224
263 Ga0182007_10002199
264 Ga0183362_10014
265 Ga0209258_100143
266 Ga0207425_1005449
267 Ga0207425_1005618
268 Ga0209148_1000007
269 Ga0209129_1000117
270 Ga0209129_1005479
271 Ga0209565_1000101
272 Ga0209565_1000229
273 Ga0209565_1000668
274 Ga0209565_1001466
275 Ga0209673_1000424
276 Ga0209673_1000463
277 Ga0209673_1000820
278 Ga0209673_1001727
279 Ga0209130_1000016
280 Ga0209130_1000722
281 Ga0209130_1000729
282 Ga0209675_1000121
283 Ga0209675_1000186
284 Ga0209675_1001356
285 Ga0209675_1001451
286 Ga0209675_1005264
287 Ga0209676_1000112
288 Ga0209676_1000325
289 Ga0209676_1001277
290 Ga0209676_1008328
291 Ga0209025_1000208
292 Ga0209025_1000233
293 Ga0209025_1000500
294 Ga0209025_1001849
295 Ga0209025_1016723
296 Ga0209025_1023820
297 Ga0209564_1000108
298 Ga0209564_1000212
299 Ga0209564_1000492
300 Ga0209564_1004221
301 Ga0209564_1008064
302 Ga0209758_1000330
303 Ga0209758_1007116
304 Ga0209050_1000052
305 Ga0209050_1000662
306 Ga0209256_1000101
307 Ga0209256_1000168
308 Ga0209256_1000275
309 Ga0207426_1000086
310 Ga0207426_1000207
311 Ga0209051_1000105
312 Ga0209051_1000186
313 Ga0209051_1000427
314 Ga0209051_1000537
315 Ga0209051_1013012
316 Ga0209257_1000037
317 Ga0209257_1000516
318 Ga0209257_1004116
319 Ga0209257_1007503
320 Ga0207656_10009787
321 Ga0207681_10060301
322 Ga0207706_10036395
323 Ga0207709_10000391
324 Ga0207709_10006786
325 Ga0207691_10068363
326 Ga0207658_10048553
327 Ga0207639_10006808
328 Ga0207683_10107375
329 Ga0209970_1000170
330 Ga0209282_1001114
331 Ga0268266_10010221
332 Ga0307515_10000013
333 Ga0307515_10000873
334 Ga0307515_10055238
335 Ga0314311_1042083
336 Ga0316180_1001675
337 Ga0316183_1082965
338 Ga0316181_1155521
339 Ga0265330_10000012
340 Ga0265330_10010501
341 Ga0265332_10000012
342 Ga0265332_10000450
343 Ga0265332_10001722
344 Ga0265325_10002458
345 Ga0307513_10000066
346 Ga0307513_10010549
347 Ga0307513_10108121
348 Ga0307408_100012570
349 Ga0265314_10000029
350 Ga0265314_10003994
351 Ga0307516_10017165
352 Ga0395899_0063478
353 Ga0395900_0005840
354 Ga0395898_0052228
355 Ga0395905_0000430
356 Ga0395905_0002286
357 Ga0395905_0037799
358 Ga0395905_0059936
359 Ga0395905_0081269
360 Ga0439436_0000149
361 Ga0439466_0008656
362 Ga0439465_0000587
363 Ga0439431_0000351
364 Ga0439433_0001265
365 Ga0439432_000358
366 Ga0439449_0001607
367 Ga0439452_002627
368 Ga0450908_001383
369 Ga0451577_0000388
370 Ga0451577_0003923
371 Ga0451577_0049381
372 Ga0466965_0012693
373 Ga0453684_0000187
374 Ga0453684_0008025
375 Ga0453684_0079513
376 Ga0466960_0015380
377 Ga0451576_0094163
378 Ga0495650_0004759
379 Ga0495650_0004978
380 Ga0495639_0003069
381 Ga0495645_0004391
382 Ga0495656_0001967
383 Ga0495604_0064088
384 Ga0496104_0011079
385 Ga0496105_0004423
386 Ga0496116_0014427
387 Ga0496117_0048135
388 Ga0496118_0037223
389 Ga0496122_0033099
390 Ga0496124_0036674
391 Ga0501031_0007256
392 Ga0501032_0021923
393 Ga0501033_0001821
394 Ga0501037_0023594
395 Ga0501038_0030574
396 Ga0501039_0019143
397 Ga0501043_0056047
398 Ga0501047_0019398
399 Ga0501198_000003
400 Ga0501222_000001
401 Ga0501035_0037005
402 Ga0501035_0060399
403 Ga0501044_0008380
404 nmdc:mga0k408_1773_c1
405 Ga0500608_000358
406 2644253804
407 2513231819
408 2644061622
409 2644075154
410 2644325684
411 2644400936
412 2738882549
413 2739243318
414 2816473896
415 2885202094
416 2885215196

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13899

Thioredoxin_7

Thioredoxin-like

635

722

0.94

PF11412

DsbD_N

Thiol:disulfide interchange protein DsbD, N-terminal

53

177

0.91

PF02683

DsbD

Cytochrome C biogenesis protein transmembrane region

338

542

0.77

Map