F318549

General Info

Members Datasets Scaffolds Average Seq Length
209 117 202 559

Family's Representative Sequence

Representative Sequence 3300001989|JGI24739J22299_10023723|JGI24739J22299_100237232
Length 607
Sequence MPRVASLFLPHLAIERLRRVGRMCGKAPSSAPPDAGPRPRFAEAVHDNPGPCSVPRGGGWRPGARWARDGTAGGRPSQAAIDALPVHQRPTMREMGRRSDHAEHPFKAMPSDEGDGAASTLSLSWASLWGKPTVLVLRTGQRDVITAACPVALDLGLRPGMVAAHARALVADLDVKDAEPEADRALLDRLAVHAARHWTPTASVSGEDGLWLDLTGTTHLFGGEERFCRQLLAFLKRLGLTARIAIAGTAGAAHALARFGREGMTLLAAGQEAQAMADLPLAALRLEPEALASAARFGLERVADLYPMSRGPLARRLGLKTVERLDQARGLVAEPIIPVVPAEAPLVTRHLLEPIGTVESITQVMSDLVDDLVILLLQRGIGARTVLLTAVRVDGEPQRLGIGASRATRDARHIKRMFGLRLAQVEPGLGIETMHLVVPHHEPLGAEALGALLETSRKGRDLAPLVDQLSARAGEAALFRLSAHESDVPERAARRIPPLNLPRAWPCWKRPVRLLRRPELLSNVVALMPDHPPRRFTWRRQDYRVVAGDGPERIHGEWWRTSREQWAVRDYFRVEAEGGQRFWLFRRGDGIDPETGDLSWHMHGLFG

Samples

Sample ID Description Type Environment
1 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
2 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
3 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
4 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
5 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
43 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
71 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
72 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
73 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
74 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
75 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
76 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
77 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
78 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
79 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
80 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
81 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
82 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
85 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
86 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
87 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
88 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
89 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
90 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
91 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
92 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
103 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
104 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
105 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
106 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
107 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
108 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
109 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
110 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
111 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
112 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
113 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
114 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
115 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
116 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
117 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.65
Metatranscriptomes 0
Isolates 3.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.71
Nodule 0
Rhizoplane 1.91
Rhizosphere 46.89
Stem 0
Stem Tuber 0
Unclassified 22.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10005357 3300001989 Bacteria 4884
2 JGI24739J22299_10023723 3300001989 Bacteria 2166
3 JGI24735J21928_10000301 3300002067 Bacteria 17218
4 Ga0055525_1000206 3300003759 Bacteria 67423
5 Ga0070677_10003543 3300005333 Bacteria 5036
6 Ga0070668_100002824 3300005347 Bacteria 12786
7 Ga0070671_100000065 3300005355 Bacteria 71901
8 Ga0070671_100041600 3300005355 Bacteria 3820
9 Ga0070667_100000103 3300005367 Bacteria 107232
10 Ga0068867_100014074 3300005459 Bacteria 5667
11 Ga0068855_100004298 3300005563 Bacteria 17411
12 Ga0068857_100059458 3300005577 Bacteria 3395
13 Ga0068854_100002682 3300005578 Bacteria 11030
14 Ga0068856_100000710 3300005614 Bacteria 36130
15 Ga0068856_100012959 3300005614 Bacteria 8073
16 Ga0068852_100002236 3300005616 Bacteria 13276
17 Ga0068861_100014503 3300005719 Bacteria 5532
18 Ga0068863_100000377 3300005841 Bacteria 45378
19 Ga0068863_100061906 3300005841 Bacteria 3539
20 Ga0068860_100016988 3300005843 Bacteria 7092
21 Ga0068860_100022766 3300005843 Bacteria 6059
22 Ga0068860_100029002 3300005843 Bacteria 5324
23 Ga0068862_100011838 3300005844 Bacteria 7203
24 Ga0075365_10004306 3300006038 Bacteria 7512
25 Ga0075368_10000011 3300006042 Bacteria 44307
26 Ga0075368_10000048 3300006042 Bacteria 28872
27 Ga0075368_10000149 3300006042 Bacteria 18659
28 Ga0075363_100000043 3300006048 Bacteria 24265
29 Ga0075363_100000328 3300006048 Bacteria 14214
30 Ga0075364_10000007 3300006051 Bacteria 73806
31 Ga0075364_10000663 3300006051 Bacteria 17856
32 Ga0075362_10000027 3300006177 Bacteria 58346
33 Ga0075362_10001246 3300006177 Bacteria 8033
34 Ga0075367_10000010 3300006178 Bacteria 43233
35 Ga0075367_10000374 3300006178 Bacteria 16144
36 Ga0075367_10000776 3300006178 Bacteria 12525
37 Ga0075369_10000204 3300006186 Bacteria 17338
38 Ga0075369_10000412 3300006186 Bacteria 12944
39 Ga0075366_10028329 3300006195 Bacteria 3288
40 Ga0075370_10000024 3300006353 Bacteria 52434
41 Ga0075370_10001913 3300006353 Bacteria 9370
42 Ga0105248_10002650 3300009177 Bacteria 19866
43 Ga0105238_10020282 3300009551 Bacteria 6767
44 Ga0105148_100201 3300009978 Bacteria 8734
45 Ga0105239_10000476 3300010375 Bacteria 58559
46 Ga0105239_10006414 3300010375 Bacteria 13654
47 Ga0105239_10105496 3300010375 Bacteria 3121
48 Ga0157370_10000228 3300013104 Bacteria 71656
49 Ga0157370_10003278 3300013104 Bacteria 19076
50 Ga0157369_10000336 3300013105 Bacteria 62349
51 Ga0163161_10029216 3300017792 Bacteria 3919
52 Ga0213875_10019269 3300021388 Bacteria 3284
53 Ga0209147_100392 3300025229 Bacteria 30038
54 Ga0209147_100438 3300025229 Bacteria 26646
55 Ga0209563_100106 3300025230 Bacteria 146256
56 Ga0209233_1000044 3300025261 Bacteria 489783
57 Ga0209257_1000768 3300025304 Bacteria 47870
58 Ga0207713_1000283 3300025735 Bacteria 58960
59 Ga0207682_10010666 3300025893 Bacteria 3594
60 Ga0207647_10002404 3300025904 Bacteria 14208
61 Ga0207649_10000254 3300025920 Bacteria 42776
62 Ga0207681_10004190 3300025923 Bacteria 8920
63 Ga0207694_10026692 3300025924 Bacteria 4396
64 Ga0207644_10000045 3300025931 Bacteria 105495
65 Ga0207711_10005813 3300025941 Bacteria 10422
66 Ga0207667_10001696 3300025949 Bacteria 27713
67 Ga0207668_10000541 3300025972 Bacteria 23747
68 Ga0207640_10000135 3300025981 Bacteria 54466
69 Ga0207658_10000080 3300025986 Bacteria 107226
70 Ga0207702_10009551 3300026078 Bacteria 8142
71 Ga0207641_10000014 3300026088 Bacteria 336170
72 Ga0207641_10005579 3300026088 Bacteria 10724
73 Ga0207648_10002863 3300026089 Bacteria 18260
74 Ga0207674_10165064 3300026116 Bacteria 2169
75 Ga0207698_10021208 3300026142 Bacteria 4488
76 Ga0207698_10063126 3300026142 Bacteria 2897
77 Ga0209813_10000139 3300027866 Bacteria 25151
78 Ga0209813_10000143 3300027866 Bacteria 24903
79 Ga0209813_10000209 3300027866 Bacteria 18051
80 Ga0268264_10019959 3300028381 Bacteria 5475
81 Ga0268264_10034511 3300028381 Bacteria 4162
82 Ga0307408_100000496 3300031548 Bacteria 34230
83 Ga0307408_100007826 3300031548 Bacteria 7063
84 Ga0307405_10001491 3300031731 Bacteria 9899
85 Ga0307405_10001981 3300031731 Bacteria 8859
86 Ga0307405_10023184 3300031731 Bacteria 3523
87 Ga0307410_10031760 3300031852 Bacteria 3392
88 Ga0307412_10000467 3300031911 Bacteria 24202
89 Ga0307412_10006315 3300031911 Bacteria 6695
90 Ga0307412_10028637 3300031911 Bacteria 3487
91 Ga0307412_10046978 3300031911 Bacteria 2832
92 Ga0307416_100002088 3300032002 Bacteria 11271
93 Ga0307416_100137984 3300032002 Bacteria 2210
94 Ga0307414_10001868 3300032004 Bacteria 10882
95 Ga0436364_1340934 3300037853 Bacteria 15178
96 Ga0237819_00364 3300038705 Bacteria 16129
97 Ga0495627_000274 3300046453 Bacteria 52104
98 Ga0495627_001230 3300046453 Bacteria 15955
99 Ga0495627_001347 3300046453 Bacteria 14818
100 Ga0495650_0002984 3300046471 Bacteria 12811
101 Ga0495596_0000483 3300046500 Bacteria 25240
102 Ga0495596_0002691 3300046500 Bacteria 9370
103 Ga0495610_0000043 3300046512 Bacteria 158045
104 Ga0495610_0000086 3300046512 Bacteria 109119
105 Ga0495610_0000165 3300046512 Bacteria 73467
106 Ga0495610_0000213 3300046512 Bacteria 62796
107 Ga0495610_0000525 3300046512 Bacteria 38499
108 Ga0495610_0003526 3300046512 Bacteria 12126
109 Ga0495648_0003994 3300046524 Bacteria 12764
110 Ga0495648_0010686 3300046524 Bacteria 6973
111 Ga0495663_0000595 3300046525 Bacteria 12661
112 Ga0495654_0006492 3300046530 Bacteria 6641
113 Ga0495668_0022255 3300046616 Bacteria 3624
114 Ga0495681_0000025 3300047470 Bacteria 148216
115 Ga0495681_0002622 3300047470 Bacteria 12783
116 Ga0495686_0000764 3300047472 Bacteria 42431
117 Ga0495615_0000033 3300048090 Bacteria 45796
118 Ga0495626_0002254 3300048091 Bacteria 13807
119 Ga0496102_0000117 3300048905 Bacteria 114037
120 Ga0496103_0000076 3300048906 Bacteria 113209
121 Ga0496105_0063431 3300048908 Bacteria 3048
122 Ga0496105_0139491 3300048908 Bacteria 1996
123 Ga0496116_0000078 3300048919 Bacteria 227712
124 Ga0496116_0000189 3300048919 Bacteria 122859
125 Ga0496116_0002618 3300048919 Bacteria 18691
126 Ga0496116_0006164 3300048919 Bacteria 10964
127 Ga0496116_0032308 3300048919 Bacteria 3732
128 Ga0496117_0000201 3300048920 Bacteria 117679
129 Ga0496117_0006890 3300048920 Bacteria 11274
130 Ga0496118_0000097 3300048921 Bacteria 160837
131 Ga0496118_0001686 3300048921 Bacteria 32279
132 Ga0496118_0007490 3300048921 Bacteria 11551
133 Ga0496118_0017221 3300048921 Bacteria 6588
134 Ga0496118_0022945 3300048921 Bacteria 5437
135 Ga0496119_0008696 3300048922 Bacteria 8873
136 Ga0496119_0015184 3300048922 Bacteria 5959
137 Ga0496119_0083641 3300048922 Bacteria 1832
138 Ga0496121_0001383 3300048924 Bacteria 41083
139 Ga0496121_0001568 3300048924 Bacteria 38102
140 Ga0496122_0000083 3300048925 Bacteria 208744
141 Ga0496122_0000094 3300048925 Bacteria 202047
142 Ga0496122_0002229 3300048925 Bacteria 28209
143 Ga0496122_0004544 3300048925 Bacteria 17105
144 Ga0496123_0000116 3300048926 Bacteria 161699
145 Ga0496123_0000356 3300048926 Bacteria 85832
146 Ga0496123_0001929 3300048926 Bacteria 27049
147 Ga0496123_0004204 3300048926 Bacteria 15365
148 Ga0496124_0000011 3300048927 Bacteria 524145
149 Ga0496124_0000202 3300048927 Bacteria 117650
150 Ga0496124_0000554 3300048927 Bacteria 63220
151 Ga0496124_0005737 3300048927 Bacteria 13822
152 Ga0496124_0022322 3300048927 Bacteria 5803
153 Ga0496125_0000285 3300048928 Bacteria 100029
154 Ga0496125_0000705 3300048928 Bacteria 55380
155 Ga0496125_0008803 3300048928 Bacteria 10497
156 Ga0496125_0041662 3300048928 Bacteria 3923
157 Ga0496126_0000051 3300048929 Bacteria 313169
158 Ga0496126_0000058 3300048929 Bacteria 272530
159 Ga0496126_0005756 3300048929 Bacteria 14020
160 Ga0496126_0011668 3300048929 Bacteria 9065
161 Ga0501032_0000525 3300049569 Bacteria 31183
162 Ga0501032_0064436 3300049569 Bacteria 2453
163 Ga0501033_0001021 3300049570 Bacteria 25442
164 Ga0501043_0044659 3300049579 Bacteria 3485
165 Ga0501043_0163002 3300049579 Bacteria 1742
166 Ga0501047_0000640 3300049581 Bacteria 36732
167 Ga0501047_0001078 3300049581 Bacteria 27187
168 Ga0501035_0000627 3300049822 Bacteria 38848
169 Ga0501044_0000406 3300049823 Bacteria 53102
170 nmdc:mga03683_316_c1 3300050489 Bacteria 14132
171 nmdc:mga03683_39_c1 3300050489 Bacteria 62423
172 nmdc:mga03n38_3_c1 3300050490 Bacteria 77674
173 nmdc:mga03n38_67_c1 3300050490 Bacteria 22276
174 nmdc:mga00v17_20_c1 3300050491 Bacteria 110672
175 nmdc:mga00v17_29_c1 3300050491 Bacteria 89620
176 nmdc:mga0yw44_16936_c1 3300050492 Bacteria 3951
177 nmdc:mga0yw44_66_c1 3300050492 Bacteria 37953
178 nmdc:mga0k408_15777_c1 3300050493 Bacteria 4182
179 nmdc:mga0k408_74387_c1 3300050493 Bacteria 1985
180 nmdc:mga06z11_23_c1 3300050494 Bacteria 67588
181 nmdc:mga06z11_661_c1 3300050494 Bacteria 12540
182 nmdc:mga06z11_6852_c1 3300050494 Bacteria 4658
183 nmdc:mga06z11_70_c1 3300050494 Bacteria 42581
184 nmdc:mga04h51_15_c1 3300050495 Bacteria 76646
185 nmdc:mga04h51_179_c1 3300050495 Bacteria 17844
186 nmdc:mga04h51_59_c1 3300050495 Bacteria 35125
187 nmdc:mga07m45_10766_c1 3300050496 Bacteria 4787
188 nmdc:mga07m45_209_c3 3300050496 Bacteria 17950
189 nmdc:mga07m45_24_c1 3300050496 Bacteria 110671
190 nmdc:mga07m45_3178_c1 3300050496 Bacteria 7885
191 nmdc:mga07m45_5_c2 3300050496 Bacteria 297012
192 nmdc:mga0sz30_331_c1 3300050516 Bacteria 18107
193 nmdc:mga0sz30_37_c3 3300050516 Bacteria 27761
194 Ga0500592_000010 3300053116 Bacteria 76714
195 Ga0500592_000055 3300053116 Bacteria 33352
196 Ga0500607_001183 3300053121 Bacteria 24020
197 Ga0500559_0001465 3300053136 Bacteria 13356
198 Ga0500559_0007190 3300053136 Bacteria 4956
199 Ga0500568_0001427 3300053139 Bacteria 15505
200 Ga0500616_0000124 3300053153 Bacteria 135532
201 Ga0500627_0000036 3300053158 Bacteria 79400
202 Ga0500627_0005323 3300053158 Bacteria 4266

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006195 Ga0075366_10028329 Ga0075366_100283292 476
2 3300026142 Ga0207698_10063126 Ga0207698_100631261 488
3 3300049579 Ga0501043_0163002 Ga0501043_0163002_54_1601 490
4 3300026116 Ga0207674_10165064 Ga0207674_101650641 492
5 3300053139 Ga0500568_0001427 Ga0500568_0001427_11901_13451 492
6 3300053153 Ga0500616_0000124 Ga0500616_0000124_43093_44643 492
7 3300048922 Ga0496119_0083641 Ga0496119_0083641_320_1822 495
8 3300005614 Ga0068856_100000710 Ga0068856_10000071022 497
9 3300005719 Ga0068861_100014503 Ga0068861_1000145035 497
10 3300026078 Ga0207702_10009551 Ga0207702_100095515 497
11 3300048905 Ga0496102_0000117 Ga0496102_0000117_109093_110640 497
12 3300048906 Ga0496103_0000076 Ga0496103_0000076_109100_110647 497
13 3300048908 Ga0496105_0139491 Ga0496105_0139491_25_1572 497
14 3300048919 Ga0496116_0002618 Ga0496116_0002618_14120_15667 497
15 3300048920 Ga0496117_0000201 Ga0496117_0000201_108907_110454 497
16 3300048921 Ga0496118_0000097 Ga0496118_0000097_7226_8773 497
17 3300048927 Ga0496124_0000202 Ga0496124_0000202_108878_110425 497
18 3300003759 Ga0055525_1000206 Ga0055525_100020614 498
19 3300025230 Ga0209563_100106 Ga0209563_10010614 498
20 3300047472 Ga0495686_0000764 Ga0495686_0000764_16105_17601 498
21 3300025920 Ga0207649_10000254 Ga0207649_1000025422 500
22 3300048908 Ga0496105_0063431 Ga0496105_0063431_1474_3033 504
23 3300005333 Ga0070677_10003543 Ga0070677_100035434 505
24 3300025893 Ga0207682_10010666 Ga0207682_100106662 505
25 iso_pu_bacteria 2818991466 2819712849 505
26 iso_pu_bacteria 2818991466 2819714852 505
27 3300025735 Ga0207713_1000283 Ga0207713_100028313 507
28 3300048921 Ga0496118_0001686 Ga0496118_0001686_19128_20666 507
29 3300048922 Ga0496119_0015184 Ga0496119_0015184_3725_5263 507
30 3300048928 Ga0496125_0000705 Ga0496125_0000705_41229_42767 507
31 3300031911 Ga0307412_10046978 Ga0307412_100469782 508
32 3300046500 Ga0495596_0000483 Ga0495596_0000483_10890_12425 508
33 3300046530 Ga0495654_0006492 Ga0495654_0006492_3348_4928 508
34 3300046616 Ga0495668_0022255 Ga0495668_0022255_1427_3007 508
35 3300053116 Ga0500592_000010 Ga0500592_000010_58630_60210 508
36 3300053158 Ga0500627_0000036 Ga0500627_0000036_1794_3374 508
37 3300053158 Ga0500627_0005323 Ga0500627_0005323_1461_3041 508
38 iso_pu_bacteria 2643221560 2643823214 511
39 3300005844 Ga0068862_100011838 Ga0068862_1000118384 513
40 3300002067 JGI24735J21928_10000301 JGI24735J21928_1000030110 515
41 3300005355 Ga0070671_100000065 Ga0070671_10000006569 515
42 3300005563 Ga0068855_100004298 Ga0068855_10000429810 515
43 3300005616 Ga0068852_100002236 Ga0068852_1000022369 515
44 3300009551 Ga0105238_10020282 Ga0105238_100202824 515
45 3300010375 Ga0105239_10000476 Ga0105239_1000047653 515
46 3300013104 Ga0157370_10000228 Ga0157370_1000022853 515
47 3300013105 Ga0157369_10000336 Ga0157369_1000033614 515
48 3300025904 Ga0207647_10002404 Ga0207647_100024049 515
49 3300025924 Ga0207694_10026692 Ga0207694_100266925 515
50 3300025949 Ga0207667_10001696 Ga0207667_1000169626 515
51 3300031548 Ga0307408_100007826 Ga0307408_1000078264 515
52 3300031731 Ga0307405_10023184 Ga0307405_100231843 515
53 3300031911 Ga0307412_10028637 Ga0307412_100286372 515
54 3300032002 Ga0307416_100002088 Ga0307416_1000020885 515
55 3300032004 Ga0307414_10001868 Ga0307414_1000186810 515
56 3300046524 Ga0495648_0010686 Ga0495648_0010686_2875_4425 515
57 3300053136 Ga0500559_0007190 Ga0500559_0007190_3018_4568 515
58 3300005355 Ga0070671_100041600 Ga0070671_1000416003 517
59 3300005614 Ga0068856_100012959 Ga0068856_1000129592 517
60 3300005841 Ga0068863_100061906 Ga0068863_1000619062 517
61 3300005843 Ga0068860_100022766 Ga0068860_1000227662 517
62 3300025229 Ga0209147_100438 Ga0209147_10043827 517
63 3300026088 Ga0207641_10005579 Ga0207641_100055793 517
64 3300046453 Ga0495627_000274 Ga0495627_000274_5552_7105 517
65 3300046524 Ga0495648_0003994 Ga0495648_0003994_5870_7423 517
66 3300046525 Ga0495663_0000595 Ga0495663_0000595_10620_12173 517
67 3300049569 Ga0501032_0064436 Ga0501032_0064436_112_1665 517
68 3300053116 Ga0500592_000055 Ga0500592_000055_10529_12082 517
69 3300006042 Ga0075368_10000149 Ga0075368_100001495 521
70 3300006048 Ga0075363_100000328 Ga0075363_10000032812 521
71 3300006051 Ga0075364_10000663 Ga0075364_100006635 521
72 3300006177 Ga0075362_10001246 Ga0075362_1000124610 521
73 3300006178 Ga0075367_10000374 Ga0075367_1000037412 521
74 3300006186 Ga0075369_10000204 Ga0075369_1000020415 521
75 3300006353 Ga0075370_10001913 Ga0075370_100019135 521
76 3300027866 Ga0209813_10000209 Ga0209813_1000020911 521
77 3300025941 Ga0207711_10005813 Ga0207711_100058136 524
78 3300031731 Ga0307405_10001491 Ga0307405_100014915 524
79 iso_pu_bacteria 2818991438 2819553580 535
80 3300031911 Ga0307412_10006315 Ga0307412_100063151 544
81 3300006038 Ga0075365_10004306 Ga0075365_100043062 545
82 3300006042 Ga0075368_10000011 Ga0075368_100000112 545
83 3300006048 Ga0075363_100000043 Ga0075363_10000004321 545
84 3300006051 Ga0075364_10000007 Ga0075364_1000000757 545
85 3300006177 Ga0075362_10000027 Ga0075362_1000002728 545
86 3300006178 Ga0075367_10000010 Ga0075367_1000001019 545
87 3300006186 Ga0075369_10000412 Ga0075369_1000041211 545
88 3300006353 Ga0075370_10000024 Ga0075370_1000002419 545
89 3300027866 Ga0209813_10000143 Ga0209813_100001438 545
90 3300050489 nmdc:mga03683_316_c1 nmdc:mga03683_316_c1_5001_6953 550
91 3300050490 nmdc:mga03n38_67_c1 nmdc:mga03n38_67_c1_5001_6953 550
92 3300050491 nmdc:mga00v17_20_c1 nmdc:mga00v17_20_c1_103720_105672 550
93 3300050492 nmdc:mga0yw44_16936_c1 nmdc:mga0yw44_16936_c1_24_1976 550
94 3300050493 nmdc:mga0k408_15777_c1 nmdc:mga0k408_15777_c1_1183_3135 550
95 3300050494 nmdc:mga06z11_661_c1 nmdc:mga06z11_661_c1_5588_7540 550
96 3300050495 nmdc:mga04h51_59_c1 nmdc:mga04h51_59_c1_5001_6953 550
97 3300050496 nmdc:mga07m45_24_c1 nmdc:mga07m45_24_c1_103719_105671 550
98 3300050516 nmdc:mga0sz30_331_c1 nmdc:mga0sz30_331_c1_4977_6929 550
99 3300005577 Ga0068857_100059458 Ga0068857_1000594582 553
100 3300005578 Ga0068854_100002682 Ga0068854_1000026825 553
101 3300025981 Ga0207640_10000135 Ga0207640_100001352 553
102 3300031548 Ga0307408_100000496 Ga0307408_10000049611 553
103 3300031731 Ga0307405_10001981 Ga0307405_100019812 553
104 3300031911 Ga0307412_10000467 Ga0307412_100004678 553
105 3300048919 Ga0496116_0000078 Ga0496116_0000078_26914_28722 553
106 3300048925 Ga0496122_0000094 Ga0496122_0000094_167798_169606 553
107 3300048926 Ga0496123_0000116 Ga0496123_0000116_82068_83876 553
108 3300048929 Ga0496126_0000058 Ga0496126_0000058_84659_86467 553
109 3300005347 Ga0070668_100002824 Ga0070668_1000028247 558
110 3300005841 Ga0068863_100000377 Ga0068863_10000037736 558
111 3300005843 Ga0068860_100016988 Ga0068860_1000169885 558
112 3300025923 Ga0207681_10004190 Ga0207681_100041906 558
113 3300025972 Ga0207668_10000541 Ga0207668_100005418 558
114 3300025986 Ga0207658_10000080 Ga0207658_1000008055 558
115 3300048924 Ga0496121_0001568 Ga0496121_0001568_19107_20807 559
116 3300010375 Ga0105239_10105496 Ga0105239_101054962 561
117 3300009177 Ga0105248_10002650 Ga0105248_1000265016 563
118 3300038705 Ga0237819_00364 Ga0237819_00364_3620_5320 563
119 3300048928 Ga0496125_0008803 Ga0496125_0008803_3964_5781 563
120 3300048927 Ga0496124_0000554 Ga0496124_0000554_50533_52341 565
121 3300048927 Ga0496124_0022322 Ga0496124_0022322_3822_5639 567
122 3300048929 Ga0496126_0000051 Ga0496126_0000051_277383_279227 567
123 3300048928 Ga0496125_0000285 Ga0496125_0000285_37079_38887 570
124 3300049569 Ga0501032_0000525 Ga0501032_0000525_3634_5439 570
125 3300049570 Ga0501033_0001021 Ga0501033_0001021_7568_9373 570
126 3300049822 Ga0501035_0000627 Ga0501035_0000627_1416_3221 570
127 3300049823 Ga0501044_0000406 Ga0501044_0000406_35228_37033 570
128 3300046512 Ga0495610_0000086 Ga0495610_0000086_21904_23721 576
129 3300046500 Ga0495596_0002691 Ga0495596_0002691_3043_4851 578
130 3300046512 Ga0495610_0003526 Ga0495610_0003526_10027_11835 578
131 3300048091 Ga0495626_0002254 Ga0495626_0002254_11871_13679 578
132 3300046512 Ga0495610_0000043 Ga0495610_0000043_16345_18093 579
133 3300053121 Ga0500607_001183 Ga0500607_001183_16897_18705 583
134 3300017792 Ga0163161_10029216 Ga0163161_100292162 584
135 3300025931 Ga0207644_10000045 Ga0207644_1000004527 584
136 iso_pu_bacteria 8054302542 8054305584 584
137 3300025304 Ga0209257_1000768 Ga0209257_100076833 585
138 3300048924 Ga0496121_0001383 Ga0496121_0001383_18381_20189 585
139 3300010375 Ga0105239_10006414 Ga0105239_1000641414 586
140 3300013104 Ga0157370_10003278 Ga0157370_1000327813 586
141 3300005367 Ga0070667_100000103 Ga0070667_10000010352 587
142 3300026088 Ga0207641_10000014 Ga0207641_100000148 587
143 3300028381 Ga0268264_10019959 Ga0268264_100199592 587
144 3300046512 Ga0495610_0000525 Ga0495610_0000525_25642_27459 587
145 3300046453 Ga0495627_001230 Ga0495627_001230_4670_6487 588
146 3300046453 Ga0495627_001347 Ga0495627_001347_7011_8828 588
147 3300046471 Ga0495650_0002984 Ga0495650_0002984_6296_8113 588
148 3300046512 Ga0495610_0000165 Ga0495610_0000165_68247_70064 588
149 3300047470 Ga0495681_0002622 Ga0495681_0002622_6269_8086 588
150 3300048090 Ga0495615_0000033 Ga0495615_0000033_32557_34380 588
151 3300050494 nmdc:mga06z11_70_c1 nmdc:mga06z11_70_c1_17897_19669 588
152 3300050495 nmdc:mga04h51_179_c1 nmdc:mga04h51_179_c1_6653_8425 588
153 3300050496 nmdc:mga07m45_10766_c1 nmdc:mga07m45_10766_c1_2571_4343 588
154 iso_pu_bacteria 2643221606 2644042580 589
155 3300005459 Ga0068867_100014074 Ga0068867_1000140742 590
156 3300026089 Ga0207648_10002863 Ga0207648_100028632 590
157 3300048919 Ga0496116_0032308 Ga0496116_0032308_644_2467 590
158 3300048922 Ga0496119_0008696 Ga0496119_0008696_5740_7563 590
159 3300048927 Ga0496124_0000011 Ga0496124_0000011_487544_489367 590
160 3300048919 Ga0496116_0006164 Ga0496116_0006164_2257_4116 591
161 3300048921 Ga0496118_0017221 Ga0496118_0017221_2535_4394 591
162 3300048925 Ga0496122_0004544 Ga0496122_0004544_11239_13098 591
163 3300048926 Ga0496123_0004204 Ga0496123_0004204_2249_4108 591
164 3300048927 Ga0496124_0005737 Ga0496124_0005737_10026_11885 591
165 3300048929 Ga0496126_0005756 Ga0496126_0005756_10026_11885 591
166 3300032002 Ga0307416_100137984 Ga0307416_1001379842 592
167 3300053136 Ga0500559_0001465 Ga0500559_0001465_6233_8041 592
168 3300009978 Ga0105148_100201 Ga0105148_1002019 593
169 3300021388 Ga0213875_10019269 Ga0213875_100192692 593
170 3300037853 Ga0436364_1340934 Ga0436364_1340934_13113_14942 593
171 3300028381 Ga0268264_10034511 Ga0268264_100345112 594
172 3300050489 nmdc:mga03683_39_c1 nmdc:mga03683_39_c1_39116_40939 594
173 3300050490 nmdc:mga03n38_3_c1 nmdc:mga03n38_3_c1_36663_38486 594
174 3300050491 nmdc:mga00v17_29_c1 nmdc:mga00v17_29_c1_38894_40717 594
175 3300050492 nmdc:mga0yw44_66_c1 nmdc:mga0yw44_66_c1_7507_9330 594
176 3300050493 nmdc:mga0k408_74387_c1 nmdc:mga0k408_74387_c1_71_1894 594
177 3300050494 nmdc:mga06z11_23_c1 nmdc:mga06z11_23_c1_39947_41770 594
178 3300050495 nmdc:mga04h51_15_c1 nmdc:mga04h51_15_c1_11598_13421 594
179 3300050496 nmdc:mga07m45_5_c2 nmdc:mga07m45_5_c2_107728_109551 594
180 3300050516 nmdc:mga0sz30_37_c3 nmdc:mga0sz30_37_c3_16911_18734 594
181 iso_pu_bacteria 2919709256 2919710939 594
182 3300048925 Ga0496122_0000083 Ga0496122_0000083_23727_25535 595
183 3300048926 Ga0496123_0000356 Ga0496123_0000356_60289_62097 595
184 3300048929 Ga0496126_0011668 Ga0496126_0011668_1544_3352 595
185 3300047470 Ga0495681_0000025 Ga0495681_0000025_129992_131815 596
186 3300049581 Ga0501047_0001078 Ga0501047_0001078_12266_14080 597
187 3300001989 JGI24739J22299_10023723 JGI24739J22299_100237232 598
188 3300005843 Ga0068860_100029002 Ga0068860_1000290021 598
189 3300026142 Ga0207698_10021208 Ga0207698_100212082 598
190 3300031852 Ga0307410_10031760 Ga0307410_100317601 598
191 3300048919 Ga0496116_0000189 Ga0496116_0000189_17281_19098 598
192 3300048921 Ga0496118_0007490 Ga0496118_0007490_2916_4733 598
193 3300048928 Ga0496125_0041662 Ga0496125_0041662_810_2633 598
194 3300049579 Ga0501043_0044659 Ga0501043_0044659_1649_3469 600
195 3300049581 Ga0501047_0000640 Ga0501047_0000640_24063_25883 600
196 3300050496 nmdc:mga07m45_3178_c1 nmdc:mga07m45_3178_c1_5960_7771 600
197 3300006042 Ga0075368_10000048 Ga0075368_1000004811 601
198 3300006178 Ga0075367_10000776 Ga0075367_1000077612 601
199 3300027866 Ga0209813_10000139 Ga0209813_1000013920 601
200 3300050494 nmdc:mga06z11_6852_c1 nmdc:mga06z11_6852_c1_2689_4506 601
201 3300050496 nmdc:mga07m45_209_c3 nmdc:mga07m45_209_c3_9887_11704 601
202 3300025261 Ga0209233_1000044 Ga0209233_1000044127 602
203 3300046512 Ga0495610_0000213 Ga0495610_0000213_10423_12240 602
204 3300048925 Ga0496122_0002229 Ga0496122_0002229_17997_19820 602
205 3300048926 Ga0496123_0001929 Ga0496123_0001929_19096_20919 602
206 3300001989 JGI24739J22299_10005357 JGI24739J22299_100053572 603
207 3300025229 Ga0209147_100392 Ga0209147_10039210 603
208 3300048920 Ga0496117_0006890 Ga0496117_0006890_6008_7825 603
209 3300048921 Ga0496118_0022945 Ga0496118_0022945_200_2017 603

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00817

IMS

impB/mucB/samB family

117

258

0.89

PF20114

DUF6504

Domain of unknown function (DUF6504)

517

605

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
8faz-assembly1.cif.gz_C cryo-em structure of the human bcdx2 complex 0.7328 276 326
4dez-assembly1.cif.gz_A structure of msdpo4 0.7234 124 326
8ouz-assembly1.cif.gz_A human rad51b-rad51c-rad51d-xrcc2 (bcdx2) complex, 2.2 a resolution 0.7113 276 333
5uxa-assembly1.cif.gz_A crystal structure of macrolide 2'-phosphotransferase mphb from escherichia coli 0.7089 542 582
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.7088 125 297
ID Description Score Start End Superfamily
4f50A02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9292 125 175 3.40.1170.60
3mfhA02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.924 127 173 3.40.1170.60
1k1qB01 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9192 126 175 3.40.1170.60
af_O74944_370_477_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9147 338 437 3.30.1490.100
af_P9WNT3_241_350_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9015 340 440 3.30.1490.100
ID Description Score Start End GO Terms
AF-A0A371YW04-F1-model_v4 DNA polymerase Y-family little finger domain-containing protein 0.9946 342 432 GO:0003684
GO:0006281
AF-A0A371YW04-F1-model_v4 DNA polymerase Y-family little finger domain-containing protein 0.9431 342 432 GO:0003684
GO:0006281
AF-V6F037-F1-model_v4 UmuC domain-containing protein 0.9316 2 334 GO:0006281
AF-A3WZ00-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9303 340 439 GO:0003684
GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A7W0MLN0-F1-model_v4 DNA polymerase Y family protein 0.9245 2 249 GO:0006281

Feature Viewer

pLDDT pTM Quality
74.95 0.51 Medium
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Predicted Structure (AlphaFold2)

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