F318944

General Info

Members Datasets Scaffolds Average Seq Length
209 140 418 523

Family's Representative Sequence

Representative Sequence 3300006195|Ga0075366_10006103|Ga0075366_100061032
Length 531
Sequence MKRRDFFKQTLPASVTLPAILNGFSVKAFTNASPLVQALMGATTDTDKVLVMIQLNGGNDGLNMVIPIDTYSAYYNARANIAIAQNKILALNGTSKTGLHPSMTGLQTLYNENKLAIVQAVGYPSPNFSHFRATDIWMTASDSNQVLNSGWIGRYLNVEFPNYPNGYPTAQMPDPLAIQIGSVSSLALQGPVSGMGMTISDPTSFYNFLDEIGDPVPVPPTPWGKELAYIRMIMGQTEKYGDAIKAAAAKITSQGSYPANNDLAQQLRIVARLVAGGLKTRVYMVSTGGFDTHSSQVEAADTTVGYHAKLMARVSDAIKCFMDDLKGLGVEERVIGMTFSEFGRRIKSNSSLGTDHGAAAPVFVFGKNVRPGIIGTNPSIPTGASTNDNVVHQYDFRSIYASILKQWFCVNDTDLQTIMLQNFQNIPIAINAACGSTGVDDVIRGDGEQLVVNYPNPFVENTKITFNTQGGHTLVQVMDTLGRVIKTLTDKVYTSGTYTVTFEGHGLPTGVYYARFQNGSTQQVRPMLKTR

Samples

Sample ID Description Type Environment
1 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
63 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
66 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
67 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
100 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
101 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
118 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
126 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
127 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
128 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
129 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
130 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
131 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
132 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
133 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
134 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
135 2738541278 Niastella sp. CF465 Isolate Unclassified
136 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
137 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
138 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
139 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
140 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.13
Metatranscriptomes 0
Isolates 2.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.83
Nodule 0
Rhizoplane 0
Rhizosphere 73.21
Stem 0
Stem Tuber 0
Unclassified 5.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075366_10006103 3300006195 Bacteria 6567
2 JGI24740J21852_10009982 3300001979 Bacteria 3682
3 JGI25154J39366_1000020 3300002738 Bacteria 233181
4 JGI25157J39369_1004704 3300002741 Bacteria 2394
5 JGI25153J46596_10005314 3300003215 Bacteria 6770
6 rootH2_10051016 3300003320 Bacteria 3619
7 rootL2_10127462 3300003322 Unclassified 3333
8 rootL2_10287377 3300003322 Bacteria 3097
9 rootH1_10015941 3300003323 Bacteria 21181
10 rootH1_10020654 3300003323 Bacteria 5309
11 rootH1_10021136 3300003323 Bacteria 3180
12 rootH1_10149030 3300003323 Bacteria 3076
13 JGI25160J50197_1015808 3300003354 Bacteria 2460
14 Ga0055535_1004543 3300003761 Bacteria 3337
15 Ga0055542_1003145 3300003762 Bacteria 4693
16 Ga0055526_1010032 3300003771 Bacteria 4465
17 Ga0055528_1000677 3300003790 Bacteria 24711
18 Ga0055530_10000460 3300003791 Bacteria 36049
19 Ga0065165_1000493 3300005262 Bacteria 60949
20 Ga0065712_10003935 3300005290 Bacteria 6223
21 Ga0068869_100007452 3300005334 Bacteria 6996
22 Ga0068869_100175240 3300005334 Bacteria 1678
23 Ga0070666_10000031 3300005335 Bacteria 132089
24 Ga0068868_100019550 3300005338 Bacteria 5076
25 Ga0070671_100174942 3300005355 Bacteria 1816
26 Ga0070674_100032637 3300005356 Bacteria 3459
27 Ga0070688_100045767 3300005365 Bacteria 2706
28 Ga0070667_100005582 3300005367 Bacteria 10502
29 Ga0070700_100037241 3300005441 Unclassified 2957
30 Ga0070678_100014273 3300005456 Bacteria 5005
31 Ga0068867_100025602 3300005459 Bacteria 4234
32 Ga0068867_100095898 3300005459 Bacteria 2257
33 Ga0070685_10023019 3300005466 Bacteria 3405
34 Ga0070698_100003794 3300005471 Bacteria 16603
35 Ga0068853_100024710 3300005539 Bacteria 5040
36 Ga0068853_100111435 3300005539 Bacteria 2431
37 Ga0068857_100164370 3300005577 Bacteria 2015
38 Ga0068856_100009849 3300005614 Bacteria 9280
39 Ga0068852_100083073 3300005616 Bacteria 2848
40 Ga0068859_100000045 3300005617 Bacteria 143607
41 Ga0068859_100002735 3300005617 Bacteria 17892
42 Ga0068859_100037279 3300005617 Bacteria 4880
43 Ga0068859_100039018 3300005617 Bacteria 4763
44 Ga0068864_100001153 3300005618 Bacteria 21991
45 Ga0068866_10015301 3300005718 Unclassified 3405
46 Ga0068861_100006513 3300005719 Bacteria 7963
47 Ga0068861_100051207 3300005719 Bacteria 3134
48 Ga0068863_100002071 3300005841 Bacteria 19895
49 Ga0068863_100014772 3300005841 Bacteria 7510
50 Ga0068863_100083427 3300005841 Unclassified 3028
51 Ga0068858_100002469 3300005842 Bacteria 18659
52 Ga0068858_100212965 3300005842 Bacteria 1829
53 Ga0068860_100004015 3300005843 Bacteria 15110
54 Ga0068860_100005946 3300005843 Bacteria 12281
55 Ga0068860_100070948 3300005843 Bacteria 3312
56 Ga0075366_10009624 3300006195 Bacteria 5401
57 Ga0097621_100006975 3300006237 Bacteria 8046
58 Ga0068871_100008627 3300006358 Bacteria 7330
59 Ga0075428_100006621 3300006844 Bacteria 12887
60 Ga0075428_100016756 3300006844 Bacteria 8092
61 Ga0075428_100099504 3300006844 Bacteria 3171
62 Ga0075430_100007912 3300006846 Bacteria 8990
63 Ga0075431_100046773 3300006847 Bacteria 4463
64 Ga0075429_100001087 3300006880 Bacteria 21847
65 Ga0097620_100000045 3300006931 Bacteria 143607
66 Ga0097620_100002735 3300006931 Bacteria 17892
67 Ga0097620_100037279 3300006931 Bacteria 4880
68 Ga0097620_100039018 3300006931 Bacteria 4763
69 Ga0111539_10038982 3300009094 Bacteria 5730
70 Ga0111539_10194951 3300009094 Bacteria 2363
71 Ga0105245_10174595 3300009098 Bacteria 2049
72 Ga0105247_10004204 3300009101 Bacteria 9238
73 Ga0105247_10081435 3300009101 Bacteria 2041
74 Ga0114129_10001029 3300009147 Bacteria 36430
75 Ga0114129_10354122 3300009147 Bacteria 1944
76 Ga0105242_10010428 3300009176 Bacteria 7129
77 Ga0105242_10021500 3300009176 Bacteria 5068
78 Ga0105237_10002015 3300009545 Bacteria 25851
79 Ga0105237_10064770 3300009545 Unclassified 3651
80 Ga0105249_10001437 3300009553 Bacteria 20858
81 Ga0105249_10002261 3300009553 Bacteria 16719
82 Ga0105249_10003083 3300009553 Bacteria 14382
83 Ga0105246_10046556 3300011119 Unclassified 2959
84 Ga0157370_10079045 3300013104 Bacteria 3097
85 Ga0157378_10016177 3300013297 Bacteria 6532
86 Ga0157378_10022243 3300013297 Bacteria 5580
87 Ga0163162_10000490 3300013306 Bacteria 36694
88 Ga0163162_10005140 3300013306 Bacteria 12610
89 Ga0157375_10141046 3300013308 Bacteria 2537
90 Ga0163163_10010386 3300014325 Bacteria 8368
91 Ga0163163_10229500 3300014325 Unclassified 1905
92 Ga0163163_10244245 3300014325 Unclassified 1845
93 Ga0157379_10042696 3300014968 Bacteria 4049
94 Ga0157379_10054764 3300014968 Bacteria 3563
95 Ga0157376_10109958 3300014969 Bacteria 2424
96 Ga0182005_1000807 3300015265 Bacteria 14203
97 Ga0209436_103518 3300025208 Bacteria 4131
98 Ga0209258_100075 3300025242 Bacteria 270751
99 Ga0209646_1000005 3300025246 Bacteria 717627
100 Ga0209646_1001221 3300025246 Bacteria 7344
101 Ga0209026_1000371 3300025250 Bacteria 41375
102 Ga0209148_1000085 3300025254 Bacteria 265193
103 Ga0209673_1000242 3300025273 Bacteria 104669
104 Ga0209758_1008394 3300025297 Bacteria 6707
105 Ga0209758_1009508 3300025297 Bacteria 6021
106 Ga0209050_1000298 3300025298 Bacteria 104315
107 Ga0207426_1000150 3300025302 Bacteria 186352
108 Ga0207426_1004665 3300025302 Bacteria 6588
109 Ga0207426_1009953 3300025302 Bacteria 3723
110 Ga0209257_1002112 3300025304 Bacteria 20785
111 Ga0207680_10000627 3300025903 Bacteria 16642
112 Ga0207654_10009254 3300025911 Bacteria 4998
113 Ga0207671_10001627 3300025914 Bacteria 25569
114 Ga0207686_10008892 3300025934 Bacteria 5433
115 Ga0207670_10027588 3300025936 Bacteria 3592
116 Ga0207669_10044864 3300025937 Bacteria 2601
117 Ga0207689_10009641 3300025942 Bacteria 8325
118 Ga0207689_10013217 3300025942 Bacteria 7045
119 Ga0207689_10046995 3300025942 Bacteria 3566
120 Ga0207689_10050959 3300025942 Bacteria 3412
121 Ga0207689_10167920 3300025942 Bacteria 1808
122 Ga0207667_10004994 3300025949 Bacteria 16205
123 Ga0207651_10040627 3300025960 Bacteria 3080
124 Ga0207712_10001513 3300025961 Bacteria 15777
125 Ga0207712_10012311 3300025961 Bacteria 5467
126 Ga0207712_10012378 3300025961 Bacteria 5450
127 Ga0207658_10009844 3300025986 Bacteria 6491
128 Ga0207703_10023695 3300026035 Bacteria 4827
129 Ga0207703_10147555 3300026035 Unclassified 2047
130 Ga0207702_10020013 3300026078 Bacteria 5545
131 Ga0207641_10000146 3300026088 Bacteria 100666
132 Ga0207641_10004985 3300026088 Bacteria 11391
133 Ga0207641_10034688 3300026088 Bacteria 4199
134 Ga0207648_10004806 3300026089 Bacteria 13786
135 Ga0207648_10009835 3300026089 Bacteria 9125
136 Ga0207648_10022154 3300026089 Bacteria 5708
137 Ga0207676_10021296 3300026095 Bacteria 4755
138 Ga0207674_10082236 3300026116 Bacteria 3221
139 Ga0207675_100011855 3300026118 Bacteria 8144
140 Ga0207675_100055944 3300026118 Bacteria 3681
141 Ga0207683_10016406 3300026121 Bacteria 6304
142 Ga0268264_10003376 3300028381 Bacteria 13787
143 Ga0268264_10010628 3300028381 Bacteria 7605
144 Ga0307515_10000002 3300028794 Bacteria 1231751
145 Ga0307515_10000024 3300028794 Bacteria 393119
146 Ga0265327_10001885 3300031251 Bacteria 24252
147 Ga0307513_10135482 3300031456 Bacteria 2399
148 Ga0307509_10125420 3300031507 Bacteria 2535
149 Ga0307509_10170440 3300031507 Bacteria 2057
150 Ga0307508_10002720 3300031616 Bacteria 18476
151 Ga0373925_0091361 3300037068 Bacteria 2328
152 Ga0439436_0003864 3300041404 Bacteria 4588
153 Ga0439439_0008858 3300041406 Bacteria 2382
154 Ga0439457_002270 3300042014 Bacteria 5544
155 Ga0451577_0003270 3300042876 Bacteria 18238
156 Ga0451577_0006557 3300042876 Bacteria 11574
157 Ga0451577_0011134 3300042876 Bacteria 8533
158 Ga0451577_0016932 3300042876 Bacteria 6741
159 Ga0451577_0077350 3300042876 Bacteria 2967
160 Ga0466969_0000004 3300044656 Bacteria 168068
161 Ga0466972_0000055 3300044658 Bacteria 111338
162 Ga0466972_0010277 3300044658 Bacteria 4701
163 Ga0466972_0032157 3300044658 Bacteria 2577
164 Ga0453683_0005307 3300044673 Bacteria 9012
165 Ga0453683_0059211 3300044673 Unclassified 2395
166 Ga0466966_0000075 3300044684 Bacteria 62899
167 Ga0453684_0105660 3300044712 Bacteria 3433
168 Ga0453684_0119270 3300044712 Bacteria 3189
169 Ga0466957_0000340 3300044842 Bacteria 22887
170 Ga0466957_0014359 3300044842 Bacteria 4611
171 Ga0466959_0000004 3300045049 Bacteria 216815
172 Ga0451576_0062606 3300045051 Unclassified 3878
173 Ga0451576_0067237 3300045051 Bacteria 3730
174 Ga0451576_0089252 3300045051 Bacteria 3206
175 Ga0495668_0003663 3300046616 Bacteria 11348
176 Ga0495670_0105853 3300046691 Bacteria 1453
177 Ga0495672_0005285 3300047320 Bacteria 10281
178 Ga0495672_0034407 3300047320 Unclassified 3131
179 Ga0495672_0048221 3300047320 Bacteria 2527
180 Ga0495686_0005912 3300047472 Bacteria 9527
181 Ga0496121_0000010 3300048924 Bacteria 793488
182 Ga0501047_0045184 3300049581 Bacteria 4258
183 Ga0501047_0053596 3300049581 Bacteria 3901
184 Ga0501047_0066324 3300049581 Bacteria 3479
185 Ga0501047_0090271 3300049581 Bacteria 2941
186 Ga0501219_000363 3300049703 Bacteria 7612
187 Ga0501225_0000743 3300049705 Bacteria 10192
188 Ga0501044_0010716 3300049823 Bacteria 9948
189 Ga0501284_00018 3300050005 Bacteria 93729
190 nmdc:mga05p37_1343_c1 3300050507 Bacteria 28597
191 nmdc:mga0qj67_29059_c1 3300050509 Bacteria 4293
192 nmdc:mga06r32_144463_c1 3300050510 Bacteria 2356
193 nmdc:mga08y16_34423_c1 3300050511 Bacteria 5320
194 Ga0500578_0000037 3300053086 Bacteria 134901
195 Ga0500583_0000089 3300053092 Bacteria 51075
196 Ga0500607_017681 3300053121 Bacteria 4064
197 Ga0500652_009557 3300053131 Bacteria 3286
198 Ga0500658_0004655 3300053134 Bacteria 5119
199 Ga0500568_0001221 3300053139 Bacteria 17154
200 Ga0500577_0003389 3300053142 Bacteria 4138
201 Ga0500589_012121 3300053147 Bacteria 3761
202 Ga0500639_020251 3300053163 Bacteria 3509
203 Ga0500611_000021 3300053727 Bacteria 102395
204 2738724568 2738541278 Bacteria 9755573
205 2819571842 2818991442 Bacteria 8318214
206 2821141909 2821136567 Bacteria 8080116
207 2904469677 2904467357 Bacteria 8057758
208 2929927768 2929921140 Bacteria 8649150
209 8003151613 8003151029 Bacteria 8187759
210 Ga0075366_10006103
211 JGI24740J21852_10009982
212 JGI25154J39366_1000020
213 JGI25157J39369_1004704
214 JGI25153J46596_10005314
215 rootH2_10051016
216 rootL2_10127462
217 rootL2_10287377
218 rootH1_10015941
219 rootH1_10020654
220 rootH1_10021136
221 rootH1_10149030
222 JGI25160J50197_1015808
223 Ga0055535_1004543
224 Ga0055542_1003145
225 Ga0055526_1010032
226 Ga0055528_1000677
227 Ga0055530_10000460
228 Ga0065165_1000493
229 Ga0065712_10003935
230 Ga0068869_100007452
231 Ga0068869_100175240
232 Ga0070666_10000031
233 Ga0068868_100019550
234 Ga0070671_100174942
235 Ga0070674_100032637
236 Ga0070688_100045767
237 Ga0070667_100005582
238 Ga0070700_100037241
239 Ga0070678_100014273
240 Ga0068867_100025602
241 Ga0068867_100095898
242 Ga0070685_10023019
243 Ga0070698_100003794
244 Ga0068853_100024710
245 Ga0068853_100111435
246 Ga0068857_100164370
247 Ga0068856_100009849
248 Ga0068852_100083073
249 Ga0068859_100000045
250 Ga0068859_100002735
251 Ga0068859_100037279
252 Ga0068859_100039018
253 Ga0068864_100001153
254 Ga0068866_10015301
255 Ga0068861_100006513
256 Ga0068861_100051207
257 Ga0068863_100002071
258 Ga0068863_100014772
259 Ga0068863_100083427
260 Ga0068858_100002469
261 Ga0068858_100212965
262 Ga0068860_100004015
263 Ga0068860_100005946
264 Ga0068860_100070948
265 Ga0075366_10009624
266 Ga0097621_100006975
267 Ga0068871_100008627
268 Ga0075428_100006621
269 Ga0075428_100016756
270 Ga0075428_100099504
271 Ga0075430_100007912
272 Ga0075431_100046773
273 Ga0075429_100001087
274 Ga0097620_100000045
275 Ga0097620_100002735
276 Ga0097620_100037279
277 Ga0097620_100039018
278 Ga0111539_10038982
279 Ga0111539_10194951
280 Ga0105245_10174595
281 Ga0105247_10004204
282 Ga0105247_10081435
283 Ga0114129_10001029
284 Ga0114129_10354122
285 Ga0105242_10010428
286 Ga0105242_10021500
287 Ga0105237_10002015
288 Ga0105237_10064770
289 Ga0105249_10001437
290 Ga0105249_10002261
291 Ga0105249_10003083
292 Ga0105246_10046556
293 Ga0157370_10079045
294 Ga0157378_10016177
295 Ga0157378_10022243
296 Ga0163162_10000490
297 Ga0163162_10005140
298 Ga0157375_10141046
299 Ga0163163_10010386
300 Ga0163163_10229500
301 Ga0163163_10244245
302 Ga0157379_10042696
303 Ga0157379_10054764
304 Ga0157376_10109958
305 Ga0182005_1000807
306 Ga0209436_103518
307 Ga0209258_100075
308 Ga0209646_1000005
309 Ga0209646_1001221
310 Ga0209026_1000371
311 Ga0209148_1000085
312 Ga0209673_1000242
313 Ga0209758_1008394
314 Ga0209758_1009508
315 Ga0209050_1000298
316 Ga0207426_1000150
317 Ga0207426_1004665
318 Ga0207426_1009953
319 Ga0209257_1002112
320 Ga0207680_10000627
321 Ga0207654_10009254
322 Ga0207671_10001627
323 Ga0207686_10008892
324 Ga0207670_10027588
325 Ga0207669_10044864
326 Ga0207689_10009641
327 Ga0207689_10013217
328 Ga0207689_10046995
329 Ga0207689_10050959
330 Ga0207689_10167920
331 Ga0207667_10004994
332 Ga0207651_10040627
333 Ga0207712_10001513
334 Ga0207712_10012311
335 Ga0207712_10012378
336 Ga0207658_10009844
337 Ga0207703_10023695
338 Ga0207703_10147555
339 Ga0207702_10020013
340 Ga0207641_10000146
341 Ga0207641_10004985
342 Ga0207641_10034688
343 Ga0207648_10004806
344 Ga0207648_10009835
345 Ga0207648_10022154
346 Ga0207676_10021296
347 Ga0207674_10082236
348 Ga0207675_100011855
349 Ga0207675_100055944
350 Ga0207683_10016406
351 Ga0268264_10003376
352 Ga0268264_10010628
353 Ga0307515_10000002
354 Ga0307515_10000024
355 Ga0265327_10001885
356 Ga0307513_10135482
357 Ga0307509_10125420
358 Ga0307509_10170440
359 Ga0307508_10002720
360 Ga0373925_0091361
361 Ga0439436_0003864
362 Ga0439439_0008858
363 Ga0439457_002270
364 Ga0451577_0003270
365 Ga0451577_0006557
366 Ga0451577_0011134
367 Ga0451577_0016932
368 Ga0451577_0077350
369 Ga0466969_0000004
370 Ga0466972_0000055
371 Ga0466972_0010277
372 Ga0466972_0032157
373 Ga0453683_0005307
374 Ga0453683_0059211
375 Ga0466966_0000075
376 Ga0453684_0105660
377 Ga0453684_0119270
378 Ga0466957_0000340
379 Ga0466957_0014359
380 Ga0466959_0000004
381 Ga0451576_0062606
382 Ga0451576_0067237
383 Ga0451576_0089252
384 Ga0495668_0003663
385 Ga0495670_0105853
386 Ga0495672_0005285
387 Ga0495672_0034407
388 Ga0495672_0048221
389 Ga0495686_0005912
390 Ga0496121_0000010
391 Ga0501047_0045184
392 Ga0501047_0053596
393 Ga0501047_0066324
394 Ga0501047_0090271
395 Ga0501219_000363
396 Ga0501225_0000743
397 Ga0501044_0010716
398 Ga0501284_00018
399 nmdc:mga05p37_1343_c1
400 nmdc:mga0qj67_29059_c1
401 nmdc:mga06r32_144463_c1
402 nmdc:mga08y16_34423_c1
403 Ga0500578_0000037
404 Ga0500583_0000089
405 Ga0500607_017681
406 Ga0500652_009557
407 Ga0500658_0004655
408 Ga0500568_0001221
409 Ga0500577_0003389
410 Ga0500589_012121
411 Ga0500639_020251
412 Ga0500611_000021
413 2738724568
414 2819571842
415 2821141909
416 2904469677
417 2929927768
418 8003151613

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18962

Por_Secre_tail

Secretion system C-terminal sorting domain

453

528

0.84

PF07394

DUF1501

Protein of unknown function (DUF1501)

226

411

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ptr-assembly1.cif.gz_A structure of hexameric s-layer protein from haloferax volcanii archaea 0.8163 454 528
7s62-assembly1.cif.gz_A locally refined protomer structure of native-form oocyte/egg alpha-2-macroglobulin (a2moo) tetramer 0.7906 446 527
4u48-assembly1.cif.gz_A crystal structure of salmonella alpha-2-macroglobulin 0.7713 457 529
4u4j-assembly1.cif.gz_A crystal structure of salmonella alpha-2-macroglobulin mutant y1175g 0.7705 457 529
3sd2-assembly1.cif.gz_A-2 crystal structure of a putative member of duf3244 protein family (bt_3571) from bacteroides thetaiotaomicron vpi-5482 at 1.40 a resolution 0.769 448 529
ID Description Score Start End Superfamily
af_I3IS91_128_224_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.8059 448 529 2.60.40.1930
af_Q9NFV8_116_214_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.8027 448 529 2.60.40.1930
af_Q7YTU0_143_240_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.7938 448 529 2.60.40.1930
af_Q9VLY7_122_220_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.7933 449 528 2.60.40.1930
af_Q9VLT3_230_326_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.7903 448 529 2.60.40.1930
ID Description Score Start End GO Terms
AF-A0A351C3I6-F1-model_v4 Peptidase S8 0.9906 450 529
AF-A0A7Y5JQJ9-F1-model_v4 T9SS type A sorting domain-containing protein 0.9883 449 529 GO:0030246
AF-A0A3M1P8D6-F1-model_v4 T9SS C-terminal target domain-containing protein 0.9851 451 529
AF-A0A7J5F3M8-F1-model_v4 T9SS type A sorting domain-containing protein 0.9848 450 529
AF-A0A419FCC6-F1-model_v4 T9SS C-terminal target domain-containing protein 0.9846 449 529

Map