F319218

General Info

Members Datasets Scaffolds Average Seq Length
209 132 418 297

Family's Representative Sequence

Representative Sequence 3300028558|Ga0265326_10000017|Ga0265326_10000017109
Length 326
Sequence MQRDLARHRLLLRRGRALRTIEGRPASPSGPLHLGNLRTALLAWLFARSAGARFLVRVEDLDPGRSRREHEAVQLADLTALGLGWDGPVVRQSERREHHRAALERLRAAGRVYPCWCTRAEIREAASAPHGAGGTGSGAYPGTCRRLTATQRAERERGGRPPALRLDAGGERVGFADRLHGPVDELVDDLVLWRNDDTPAYNLAVVVDDADQGIGEVVRGDDLLETTPRQLLLHRLLGLREPAYAHVPLVLGPDGARLAKRHGAVTLADRAARGEAAADVLAWMARSLGLAAPDEPVGLPLLLARFDPAALPRAATTFGIPLTDSP

Samples

Sample ID Description Type Environment
1 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
59 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
60 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
63 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
71 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
78 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
79 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
80 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
81 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
82 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
83 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
88 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
89 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
90 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
91 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
94 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
95 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
96 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
102 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
103 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
125 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
132 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.18
Nodule 0
Rhizoplane 8.61
Rhizosphere 81.34
Stem 0
Stem Tuber 0
Unclassified 0.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265326_10000017 3300028558 Bacteria 152436
2 Ga0070658_10067044 3300005327 Bacteria 2932
3 Ga0070683_100262051 3300005329 Bacteria 1644
4 Ga0070683_100676889 3300005329 Bacteria 988
5 Ga0070680_100028141 3300005336 Bacteria 4507
6 Ga0070682_100194946 3300005337 Bacteria 1425
7 Ga0068868_100101951 3300005338 Bacteria 2323
8 Ga0070660_100038281 3300005339 Bacteria 3640
9 Ga0070661_100192287 3300005344 Bacteria 1557
10 Ga0070659_100000062 3300005366 Bacteria 85063
11 Ga0070659_100005222 3300005366 Bacteria 9321
12 Ga0070714_100001271 3300005435 Bacteria 18225
13 Ga0070714_100045990 3300005435 Bacteria 3701
14 Ga0070710_10000002 3300005437 Bacteria 290371
15 Ga0070705_100000384 3300005440 Bacteria 25798
16 Ga0070681_10031552 3300005458 Bacteria 5319
17 Ga0070681_10042492 3300005458 Bacteria 4554
18 Ga0070681_10076241 3300005458 Bacteria 3312
19 Ga0070679_100097613 3300005530 Bacteria 2926
20 Ga0070679_100162726 3300005530 Bacteria 2205
21 Ga0070679_100238638 3300005530 Bacteria 1776
22 Ga0070684_100033977 3300005535 Bacteria 4358
23 Ga0070684_100163444 3300005535 Bacteria 2020
24 Ga0070684_100267729 3300005535 Bacteria 1564
25 Ga0068853_100024075 3300005539 Bacteria 5103
26 Ga0070665_100011976 3300005548 Bacteria 8756
27 Ga0068856_100003554 3300005614 Bacteria 15697
28 Ga0068856_100028790 3300005614 Bacteria 5427
29 Ga0068852_100000468 3300005616 Bacteria 26515
30 Ga0068862_100286575 3300005844 Bacteria 1511
31 Ga0081538_10000632 3300005981 Bacteria 39001
32 Ga0081538_10057102 3300005981 Bacteria 2279
33 Ga0081539_10011693 3300005985 Bacteria 6899
34 Ga0081539_10014079 3300005985 Bacteria 5952
35 Ga0070717_10000006 3300006028 Bacteria 353403
36 Ga0075365_10016981 3300006038 Bacteria 4444
37 Ga0075365_10053530 3300006038 Bacteria 2673
38 Ga0075365_10063739 3300006038 Bacteria 2468
39 Ga0075365_10234258 3300006038 Bacteria 1289
40 Ga0075365_10341478 3300006038 Bacteria 1055
41 Ga0075364_10038581 3300006051 Bacteria 3094
42 Ga0075364_10096259 3300006051 Bacteria 1968
43 Ga0075364_10192505 3300006051 Bacteria 1381
44 Ga0075364_10250737 3300006051 Bacteria 1203
45 Ga0070712_100000033 3300006175 Bacteria 71090
46 Ga0075430_100064845 3300006846 Bacteria 3069
47 Ga0075429_100003063 3300006880 Bacteria 14166
48 Ga0105240_10087316 3300009093 Bacteria 3820
49 Ga0105240_10117175 3300009093 Bacteria 3212
50 Ga0105245_10157913 3300009098 Bacteria 2150
51 Ga0105237_10016514 3300009545 Bacteria 7670
52 Ga0105249_10266966 3300009553 Bacteria 1703
53 Ga0157370_10014489 3300013104 Bacteria 8060
54 Ga0157369_10046723 3300013105 Bacteria 4705
55 Ga0157372_10350506 3300013307 Bacteria 1720
56 Ga0163163_10293920 3300014325 Bacteria 1677
57 Ga0157380_10692688 3300014326 Bacteria 1023
58 Ga0157379_10014613 3300014968 Bacteria 6886
59 Ga0213875_10000049 3300021388 Bacteria 145739
60 Ga0213875_10011599 3300021388 Bacteria 4379
61 Ga0207692_10000005 3300025898 Bacteria 370169
62 Ga0207707_10023389 3300025912 Bacteria 5405
63 Ga0207707_10058458 3300025912 Bacteria 3356
64 Ga0207707_10088856 3300025912 Bacteria 2700
65 Ga0207695_10315963 3300025913 Bacteria 1452
66 Ga0207671_10350405 3300025914 Bacteria 1171
67 Ga0207693_10000218 3300025915 Bacteria 52727
68 Ga0207660_10211817 3300025917 Bacteria 1518
69 Ga0207660_10286738 3300025917 Bacteria 1308
70 Ga0207657_10014855 3300025919 Bacteria 7579
71 Ga0207657_10040191 3300025919 Bacteria 4147
72 Ga0207652_10005528 3300025921 Bacteria 10246
73 Ga0207652_10062006 3300025921 Bacteria 3230
74 Ga0207687_10054165 3300025927 Bacteria 2805
75 Ga0207664_10000025 3300025929 Bacteria 196804
76 Ga0207664_10000258 3300025929 Bacteria 39880
77 Ga0207664_10038396 3300025929 Bacteria 3713
78 Ga0207690_10000059 3300025932 Bacteria 100526
79 Ga0207690_10061384 3300025932 Bacteria 2555
80 Ga0207691_10357832 3300025940 Bacteria 1248
81 Ga0207661_10030971 3300025944 Bacteria 4126
82 Ga0207661_10035423 3300025944 Bacteria 3889
83 Ga0207661_10228072 3300025944 Bacteria 1648
84 Ga0207667_10641430 3300025949 Bacteria 1068
85 Ga0207677_10099745 3300026023 Bacteria 2133
86 Ga0207639_10114994 3300026041 Bacteria 2199
87 Ga0207702_10044687 3300026078 Bacteria 3724
88 Ga0207698_10071000 3300026142 Bacteria 2761
89 Ga0265319_1000904 3300028563 Bacteria 18706
90 Ga0265319_1030231 3300028563 Bacteria 1895
91 Ga0265334_10000029 3300028573 Bacteria 114485
92 Ga0265318_10027413 3300028577 Bacteria 2239
93 Ga0265338_10002808 3300028800 Bacteria 25420
94 Ga0265324_10002683 3300029957 Bacteria 8875
95 Ga0265328_10035064 3300031239 Bacteria 1856
96 Ga0265320_10026556 3300031240 Bacteria 3028
97 Ga0265313_10056395 3300031595 Bacteria 1858
98 Ga0316576_10012825 3300031727 Bacteria 5546
99 Ga0307410_10260150 3300031852 Bacteria 1353
100 Ga0307409_100817870 3300031995 Bacteria 940
101 Ga0307416_100263649 3300032002 Bacteria 1686
102 Ga0316574_0006440 3300035398 Bacteria 6348
103 Ga0316574_0048437 3300035398 Bacteria 2639
104 Ga0316584_0001286 3300036712 Bacteria 14821
105 Ga0395900_0003624 3300037418 Bacteria 16608
106 Ga0395898_0006677 3300037466 Bacteria 12305
107 Ga0436364_0057161 3300037853 Bacteria 73680
108 Ga0395901_0029518 3300038443 Bacteria 5647
109 Ga0395901_0233282 3300038443 Bacteria 1921
110 Ga0436365_1517710 3300039437 Bacteria 2288
111 Ga0466966_0069732 3300044684 Bacteria 2205
112 Ga0466966_0206509 3300044684 Bacteria 1188
113 Ga0466966_0255901 3300044684 Bacteria 1054
114 Ga0466961_0004703 3300044693 Bacteria 8585
115 Ga0466963_0005618 3300044694 Bacteria 7357
116 Ga0466963_0045207 3300044694 Bacteria 2900
117 Ga0466963_0047718 3300044694 Bacteria 2827
118 Ga0466963_0058014 3300044694 Bacteria 2580
119 Ga0466963_0167796 3300044694 Bacteria 1529
120 Ga0466957_0064304 3300044842 Bacteria 2257
121 Ga0466957_0067854 3300044842 Bacteria 2201
122 Ga0466960_0000246 3300044901 Bacteria 18817
123 Ga0466959_0005191 3300045049 Bacteria 8882
124 Ga0466959_0022051 3300045049 Bacteria 4704
125 Ga0466958_0105014 3300045836 Bacteria 1760
126 Ga0466958_0125572 3300045836 Bacteria 1609
127 Ga0466967_0001365 3300045976 Bacteria 14053
128 Ga0466967_0020165 3300045976 Bacteria 5379
129 Ga0466967_0078896 3300045976 Bacteria 2967
130 Ga0466967_0133672 3300045976 Bacteria 2305
131 Ga0466967_0162129 3300045976 Bacteria 2099
132 Ga0466967_0165227 3300045976 Bacteria 2080
133 Ga0466967_0691900 3300045976 Bacteria 1009
134 Ga0495650_0000243 3300046471 Bacteria 107776
135 Ga0495582_0249530 3300046473 Bacteria 1018
136 Ga0495672_0016517 3300047320 Bacteria 4970
137 Ga0495672_0053127 3300047320 Bacteria 2376
138 Ga0495686_0124036 3300047472 Bacteria 1537
139 Ga0496101_0063063 3300048904 Bacteria 2696
140 Ga0496103_0072315 3300048906 Bacteria 2160
141 Ga0496104_0062852 3300048907 Bacteria 3521
142 Ga0496105_0029726 3300048908 Bacteria 4473
143 Ga0496106_0037419 3300048909 Bacteria 3630
144 Ga0496107_0010677 3300048910 Bacteria 6386
145 Ga0496107_0165627 3300048910 Bacteria 1639
146 Ga0496108_0121590 3300048911 Bacteria 2240
147 Ga0496109_0107703 3300048912 Bacteria 2589
148 Ga0496109_0126661 3300048912 Bacteria 2382
149 Ga0496110_0037340 3300048913 Bacteria 4222
150 Ga0496110_0295394 3300048913 Bacteria 1476
151 Ga0496111_0053948 3300048914 Bacteria 2905
152 Ga0496112_0000158 3300048915 Bacteria 42617
153 Ga0496112_0001111 3300048915 Bacteria 19976
154 Ga0496112_0019453 3300048915 Bacteria 6410
155 Ga0496112_0057778 3300048915 Bacteria 3820
156 Ga0496114_0068929 3300048917 Bacteria 2970
157 Ga0496119_0108968 3300048922 Bacteria 1540
158 Ga0496121_0002162 3300048924 Bacteria 30763
159 Ga0501032_0228620 3300049569 Bacteria 1210
160 Ga0501034_0002306 3300049571 Bacteria 23347
161 Ga0501034_0336275 3300049571 Bacteria 1441
162 Ga0501036_0002140 3300049572 Bacteria 15411
163 Ga0501036_0065338 3300049572 Bacteria 3080
164 Ga0501036_0369757 3300049572 Bacteria 1197
165 Ga0501036_0400358 3300049572 Bacteria 1145
166 Ga0501038_0049203 3300049574 Bacteria 3645
167 Ga0501038_0064340 3300049574 Bacteria 3128
168 Ga0501039_0044568 3300049575 Bacteria 3427
169 Ga0501040_0367229 3300049576 Bacteria 1032
170 Ga0501041_0090718 3300049577 Bacteria 1887
171 Ga0501042_0042098 3300049578 Bacteria 3250
172 Ga0501047_0025044 3300049581 Bacteria 5732
173 Ga0501048_0022315 3300049582 Bacteria 4631
174 Ga0501068_0015497 3300049584 Bacteria 4379
175 Ga0501071_0045569 3300049587 Bacteria 3148
176 Ga0501071_0106814 3300049587 Bacteria 2067
177 Ga0501072_0012613 3300049588 Bacteria 6461
178 Ga0501074_0176462 3300049590 Bacteria 1525
179 Ga0501075_0071466 3300049591 Bacteria 2623
180 Ga0501075_0165810 3300049591 Bacteria 1685
181 Ga0501075_0337146 3300049591 Bacteria 1149
182 Ga0501076_0050476 3300049592 Bacteria 3291
183 Ga0501076_0134360 3300049592 Bacteria 2008
184 Ga0501076_0447494 3300049592 Bacteria 1063
185 Ga0501079_0111969 3300049741 Bacteria 2121
186 Ga0501079_0183998 3300049741 Bacteria 1631
187 Ga0501080_0004591 3300049742 Bacteria 12307
188 Ga0501035_0004385 3300049822 Bacteria 13396
189 Ga0501035_0251869 3300049822 Bacteria 1499
190 Ga0501035_0454335 3300049822 Bacteria 1059
191 Ga0501044_0026420 3300049823 Bacteria 6144
192 Ga0501044_0044914 3300049823 Bacteria 4581
193 Ga0501045_0040519 3300049824 Bacteria 3389
194 Ga0501045_0103813 3300049824 Bacteria 2105
195 Ga0501045_0242219 3300049824 Bacteria 1342
196 nmdc:mga00v17_198761_c1 3300050491 Bacteria 1296
197 nmdc:mga00v17_294505_c1 3300050491 Unclassified 1054
198 nmdc:mga0yw44_245069_c1 3300050492 Bacteria 1192
199 nmdc:mga0yw44_58359_c1 3300050492 Bacteria 2357
200 nmdc:mga0yw44_92965_c1 3300050492 Bacteria 1909
201 nmdc:mga0qj67_6856_c1 3300050509 Bacteria 8376
202 nmdc:mga08y16_249425_c1 3300050511 Bacteria 1834
203 Ga0500556_0000788 3300053104 Bacteria 18652
204 Ga0501084_0085423 3300054114 Bacteria 2649
205 Ga0501084_0238666 3300054114 Bacteria 1534
206 Ga0501082_0002891 3300060353 Bacteria 14975
207 Ga0501082_0465857 3300060353 Bacteria 1104
208 Ga0466962_0076043 3300061719 Bacteria 1605
209 Ga0530510_0051306 3300061734 Bacteria 2980
210 Ga0265326_10000017
211 Ga0070658_10067044
212 Ga0070683_100262051
213 Ga0070683_100676889
214 Ga0070680_100028141
215 Ga0070682_100194946
216 Ga0068868_100101951
217 Ga0070660_100038281
218 Ga0070661_100192287
219 Ga0070659_100000062
220 Ga0070659_100005222
221 Ga0070714_100001271
222 Ga0070714_100045990
223 Ga0070710_10000002
224 Ga0070705_100000384
225 Ga0070681_10031552
226 Ga0070681_10042492
227 Ga0070681_10076241
228 Ga0070679_100097613
229 Ga0070679_100162726
230 Ga0070679_100238638
231 Ga0070684_100033977
232 Ga0070684_100163444
233 Ga0070684_100267729
234 Ga0068853_100024075
235 Ga0070665_100011976
236 Ga0068856_100003554
237 Ga0068856_100028790
238 Ga0068852_100000468
239 Ga0068862_100286575
240 Ga0081538_10000632
241 Ga0081538_10057102
242 Ga0081539_10011693
243 Ga0081539_10014079
244 Ga0070717_10000006
245 Ga0075365_10016981
246 Ga0075365_10053530
247 Ga0075365_10063739
248 Ga0075365_10234258
249 Ga0075365_10341478
250 Ga0075364_10038581
251 Ga0075364_10096259
252 Ga0075364_10192505
253 Ga0075364_10250737
254 Ga0070712_100000033
255 Ga0075430_100064845
256 Ga0075429_100003063
257 Ga0105240_10087316
258 Ga0105240_10117175
259 Ga0105245_10157913
260 Ga0105237_10016514
261 Ga0105249_10266966
262 Ga0157370_10014489
263 Ga0157369_10046723
264 Ga0157372_10350506
265 Ga0163163_10293920
266 Ga0157380_10692688
267 Ga0157379_10014613
268 Ga0213875_10000049
269 Ga0213875_10011599
270 Ga0207692_10000005
271 Ga0207707_10023389
272 Ga0207707_10058458
273 Ga0207707_10088856
274 Ga0207695_10315963
275 Ga0207671_10350405
276 Ga0207693_10000218
277 Ga0207660_10211817
278 Ga0207660_10286738
279 Ga0207657_10014855
280 Ga0207657_10040191
281 Ga0207652_10005528
282 Ga0207652_10062006
283 Ga0207687_10054165
284 Ga0207664_10000025
285 Ga0207664_10000258
286 Ga0207664_10038396
287 Ga0207690_10000059
288 Ga0207690_10061384
289 Ga0207691_10357832
290 Ga0207661_10030971
291 Ga0207661_10035423
292 Ga0207661_10228072
293 Ga0207667_10641430
294 Ga0207677_10099745
295 Ga0207639_10114994
296 Ga0207702_10044687
297 Ga0207698_10071000
298 Ga0265319_1000904
299 Ga0265319_1030231
300 Ga0265334_10000029
301 Ga0265318_10027413
302 Ga0265338_10002808
303 Ga0265324_10002683
304 Ga0265328_10035064
305 Ga0265320_10026556
306 Ga0265313_10056395
307 Ga0316576_10012825
308 Ga0307410_10260150
309 Ga0307409_100817870
310 Ga0307416_100263649
311 Ga0316574_0006440
312 Ga0316574_0048437
313 Ga0316584_0001286
314 Ga0395900_0003624
315 Ga0395898_0006677
316 Ga0436364_0057161
317 Ga0395901_0029518
318 Ga0395901_0233282
319 Ga0436365_1517710
320 Ga0466966_0069732
321 Ga0466966_0206509
322 Ga0466966_0255901
323 Ga0466961_0004703
324 Ga0466963_0005618
325 Ga0466963_0045207
326 Ga0466963_0047718
327 Ga0466963_0058014
328 Ga0466963_0167796
329 Ga0466957_0064304
330 Ga0466957_0067854
331 Ga0466960_0000246
332 Ga0466959_0005191
333 Ga0466959_0022051
334 Ga0466958_0105014
335 Ga0466958_0125572
336 Ga0466967_0001365
337 Ga0466967_0020165
338 Ga0466967_0078896
339 Ga0466967_0133672
340 Ga0466967_0162129
341 Ga0466967_0165227
342 Ga0466967_0691900
343 Ga0495650_0000243
344 Ga0495582_0249530
345 Ga0495672_0016517
346 Ga0495672_0053127
347 Ga0495686_0124036
348 Ga0496101_0063063
349 Ga0496103_0072315
350 Ga0496104_0062852
351 Ga0496105_0029726
352 Ga0496106_0037419
353 Ga0496107_0010677
354 Ga0496107_0165627
355 Ga0496108_0121590
356 Ga0496109_0107703
357 Ga0496109_0126661
358 Ga0496110_0037340
359 Ga0496110_0295394
360 Ga0496111_0053948
361 Ga0496112_0000158
362 Ga0496112_0001111
363 Ga0496112_0019453
364 Ga0496112_0057778
365 Ga0496114_0068929
366 Ga0496119_0108968
367 Ga0496121_0002162
368 Ga0501032_0228620
369 Ga0501034_0002306
370 Ga0501034_0336275
371 Ga0501036_0002140
372 Ga0501036_0065338
373 Ga0501036_0369757
374 Ga0501036_0400358
375 Ga0501038_0049203
376 Ga0501038_0064340
377 Ga0501039_0044568
378 Ga0501040_0367229
379 Ga0501041_0090718
380 Ga0501042_0042098
381 Ga0501047_0025044
382 Ga0501048_0022315
383 Ga0501068_0015497
384 Ga0501071_0045569
385 Ga0501071_0106814
386 Ga0501072_0012613
387 Ga0501074_0176462
388 Ga0501075_0071466
389 Ga0501075_0165810
390 Ga0501075_0337146
391 Ga0501076_0050476
392 Ga0501076_0134360
393 Ga0501076_0447494
394 Ga0501079_0111969
395 Ga0501079_0183998
396 Ga0501080_0004591
397 Ga0501035_0004385
398 Ga0501035_0251869
399 Ga0501035_0454335
400 Ga0501044_0026420
401 Ga0501044_0044914
402 Ga0501045_0040519
403 Ga0501045_0103813
404 Ga0501045_0242219
405 nmdc:mga00v17_198761_c1
406 nmdc:mga00v17_294505_c1
407 nmdc:mga0yw44_245069_c1
408 nmdc:mga0yw44_58359_c1
409 nmdc:mga0yw44_92965_c1
410 nmdc:mga0qj67_6856_c1
411 nmdc:mga08y16_249425_c1
412 Ga0500556_0000788
413 Ga0501084_0085423
414 Ga0501084_0238666
415 Ga0501082_0002891
416 Ga0501082_0465857
417 Ga0466962_0076043
418 Ga0530510_0051306

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

23

289

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cfo-assembly1.cif.gz_A non-discriminating glutamyl-trna synthetase from thermosynechococcus elongatus in complex with glu 0.8908 5 293
4a91-assembly1.cif.gz_A crystal structure of the glutamyl-queuosine trnaasp synthetase from e. coli complexed with l-glutamate 0.8689 3 293
2cfo-assembly1.cif.gz_A non-discriminating glutamyl-trna synthetase from thermosynechococcus elongatus in complex with glu 0.8572 5 293
3pny-assembly1.cif.gz_B structure of glutamyl-trna synthetase from mycobacterium tuberculosis in space group p21 0.8543 3 293
6b1p-assembly1.cif.gz_A crystal structure of glutamate-trna synthetase from helicobacter pylori 0.8533 3 293
ID Description Score Start End Superfamily
4a91A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9463 3 79 3.40.50.620
1nzjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9436 3 79 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9362 7 234 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9064 7 234 3.40.50.620
af_P27305_7_302_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8847 3 293 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A1H7IB23-F1-model_v4 Glutamyl-tRNA synthetase 0.951 27 298 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A520EKH4-F1-model_v4 tRNA glutamyl-Q(34) synthetase GluQRS (EC 6.1.1.-) 0.9487 6 249 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270
AF-A0A813B965-F1-model_v4 deleted 0.9477 44 293
AF-V8CZI7-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) 0.9465 5 296 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270
AF-A0A2N2FK30-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) 0.9431 1 290 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270

Map