F319280

General Info

Members Datasets Scaffolds Average Seq Length
209 149 208 450

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_100003879|Ga0307409_1000038792
Length 513
Sequence MRVILDVERLSTFAITLTPALSRSTGRGSKTIAISMHLPLHEPSLRATSSASSRPAKAAPLRLSIIHPCIGRRPGQKYIRTWQMEPLPAATIAGLTPRGVDIRFHDDRMEAIPFDEPADLVAISVETYTAKRAYQIASEYRRRGVPVVMGGFHATLCPDEVAEYADSVVVGEAEMVWARVIDDYRHGTPQKLYRGTGRADLSSLRPDRSIFRGKRYLPVGLVEAGRGCHFKCEFCAVTSVFGATQTRRPVERIIAEIEHVRRDFQRNLLFFVDDNITSNMDEAKALYRALIPLKVRWVSQASINAAHDEDFLDLLARSGCMGVLIGFESVDERNLADMNKRFNTMRGGFDVALANLRRYGIRVYGTFIFGYDRDTPETFDKTVAFAKEHGLYIAAFNHLTPFPGTPLYERLQRDGRLRFERWWLDDAYSYNTIPFTPAGMPPDELQRRCVDARRRFYAWPSILRRSVMGANRKSAFMFRNFFLINALHRADVSARDHYPLGDAAWQGSLLKAN

Samples

Sample ID Description Type Environment
1 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
88 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
89 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
92 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
95 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
105 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
106 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
107 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
108 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.52
Metatranscriptomes 0
Isolates 0.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.83
Nodule 0
Rhizoplane 1.44
Rhizosphere 89.95
Stem 0
Stem Tuber 0
Unclassified 4.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10001564 3300003203 Bacteria 10789
2 Ga0065715_10005103 3300005293 Bacteria 5554
3 Ga0065715_10089760 3300005293 Bacteria 8591
4 Ga0070683_100036937 3300005329 Bacteria 4470
5 Ga0070670_100009635 3300005331 Bacteria 8243
6 Ga0068869_100052681 3300005334 Bacteria 2955
7 Ga0068869_100117049 3300005334 Bacteria 2034
8 Ga0070680_100012421 3300005336 Bacteria 6618
9 Ga0070682_100000003 3300005337 Bacteria 469319
10 Ga0068868_100000270 3300005338 Bacteria 35160
11 Ga0070689_100004516 3300005340 Bacteria 9424
12 Ga0070689_100004596 3300005340 Bacteria 9349
13 Ga0070669_100066605 3300005353 Bacteria 2655
14 Ga0070675_100019432 3300005354 Bacteria 5415
15 Ga0070688_100030697 3300005365 Unclassified 3227
16 Ga0070705_100110155 3300005440 Bacteria 1758
17 Ga0070700_100131117 3300005441 Bacteria 1692
18 Ga0068867_100140964 3300005459 Bacteria 1884
19 Ga0070685_10027907 3300005466 Bacteria 3124
20 Ga0070707_100055017 3300005468 Bacteria 3815
21 Ga0070698_100026978 3300005471 Bacteria 5973
22 Ga0070698_100097909 3300005471 Bacteria 2909
23 Ga0070698_100232370 3300005471 Bacteria 1777
24 Ga0070699_100044660 3300005518 Bacteria 3836
25 Ga0070697_100076914 3300005536 Bacteria 2745
26 Ga0070672_100000182 3300005543 Bacteria 34415
27 Ga0070695_100012045 3300005545 Bacteria 5183
28 Ga0070696_100003926 3300005546 Bacteria 9924
29 Ga0070693_100055049 3300005547 Bacteria 2290
30 Ga0068855_100190615 3300005563 Bacteria 2313
31 Ga0068857_100013027 3300005577 Bacteria 7245
32 Ga0068857_100032733 3300005577 Unclassified 4596
33 Ga0068854_100137591 3300005578 Unclassified 1871
34 Ga0068859_100158751 3300005617 Unclassified 2340
35 Ga0068864_100000013 3300005618 Bacteria 326235
36 Ga0068861_100139526 3300005719 Bacteria 1977
37 Ga0068870_10032320 3300005840 Bacteria 2659
38 Ga0068863_100042369 3300005841 Unclassified 4325
39 Ga0068858_100000667 3300005842 Bacteria 35901
40 Ga0068862_100006490 3300005844 Bacteria 9712
41 Ga0081539_10000577 3300005985 Bacteria 75437
42 Ga0070717_10000046 3300006028 Bacteria 106495
43 Ga0075368_10002091 3300006042 Bacteria 6449
44 Ga0075363_100065125 3300006048 Bacteria 1970
45 Ga0075367_10058061 3300006178 Bacteria 2302
46 Ga0075370_10002153 3300006353 Bacteria 9015
47 Ga0075428_100025900 3300006844 Bacteria 6495
48 Ga0075431_100003605 3300006847 Bacteria 14998
49 Ga0075431_100136407 3300006847 Unclassified 2530
50 Ga0075431_100349806 3300006847 Bacteria 1486
51 Ga0075433_10008520 3300006852 Bacteria 8179
52 Ga0075433_10090565 3300006852 Unclassified 2704
53 Ga0075429_100088527 3300006880 Unclassified 2699
54 Ga0075429_100120345 3300006880 Unclassified 2295
55 Ga0097620_100158742 3300006931 Unclassified 2340
56 Ga0075435_100066745 3300007076 Bacteria 2928
57 Ga0075435_100185854 3300007076 Bacteria 1757
58 Ga0111539_10000024 3300009094 Bacteria 197871
59 Ga0111539_10002476 3300009094 Bacteria 24500
60 Ga0111539_10006863 3300009094 Bacteria 14627
61 Ga0111539_10014187 3300009094 Bacteria 9950
62 Ga0111539_10027804 3300009094 Bacteria 6907
63 Ga0111539_10037780 3300009094 Bacteria 5828
64 Ga0111539_10043401 3300009094 Bacteria 5390
65 Ga0111539_10497504 3300009094 Unclassified 1420
66 Ga0105245_10004230 3300009098 Bacteria 12739
67 Ga0105245_10007168 3300009098 Bacteria 9773
68 Ga0114129_10008343 3300009147 Bacteria 14775
69 Ga0114129_10035875 3300009147 Bacteria 7003
70 Ga0114129_10187674 3300009147 Bacteria 2809
71 Ga0105242_10000470 3300009176 Bacteria 32011
72 Ga0105248_10047480 3300009177 Bacteria 4815
73 Ga0105237_10044015 3300009545 Bacteria 4496
74 Ga0105238_10003104 3300009551 Bacteria 16568
75 Ga0105238_10007809 3300009551 Bacteria 10700
76 Ga0105249_10131653 3300009553 Bacteria 2388
77 Ga0157370_10074129 3300013104 Bacteria 3211
78 Ga0157378_10028742 3300013297 Unclassified 4909
79 Ga0163162_10006079 3300013306 Bacteria 11687
80 Ga0157375_10000030 3300013308 Bacteria 199141
81 Ga0163163_10240584 3300014325 Bacteria 1860
82 Ga0157380_10001622 3300014326 Bacteria 14830
83 Ga0157380_10038203 3300014326 Bacteria 3726
84 Ga0157380_10215172 3300014326 Bacteria 1715
85 Ga0157379_10144926 3300014968 Unclassified 2142
86 Ga0213876_10001208 3300021384 Bacteria 16289
87 Ga0207660_10004885 3300025917 Bacteria 8732
88 Ga0207694_10001892 3300025924 Bacteria 17356
89 Ga0207694_10073688 3300025924 Bacteria 2672
90 Ga0207650_10134745 3300025925 Bacteria 1936
91 Ga0207687_10004984 3300025927 Bacteria 8800
92 Ga0207700_10003368 3300025928 Bacteria 9277
93 Ga0207686_10001257 3300025934 Bacteria 14633
94 Ga0207670_10002644 3300025936 Bacteria 9425
95 Ga0207670_10013343 3300025936 Unclassified 4840
96 Ga0207670_10199894 3300025936 Bacteria 1518
97 Ga0207691_10002723 3300025940 Bacteria 17261
98 Ga0207691_10026523 3300025940 Bacteria 5436
99 Ga0207689_10127553 3300025942 Bacteria 2093
100 Ga0207689_10138162 3300025942 Bacteria 2007
101 Ga0207667_10200955 3300025949 Bacteria 2045
102 Ga0207712_10185178 3300025961 Bacteria 1639
103 Ga0207677_10000032 3300026023 Bacteria 119113
104 Ga0207703_10000134 3300026035 Bacteria 90044
105 Ga0207702_10039185 3300026078 Bacteria 3970
106 Ga0207641_10002645 3300026088 Bacteria 16390
107 Ga0207676_10000030 3300026095 Bacteria 221663
108 Ga0207674_10019960 3300026116 Bacteria 7251
109 Ga0207674_10041582 3300026116 Unclassified 4752
110 Ga0207675_100021261 3300026118 Bacteria 6043
111 Ga0207675_100039302 3300026118 Bacteria 4416
112 Ga0207675_100096476 3300026118 Bacteria 2783
113 Ga0207683_10148879 3300026121 Bacteria 2112
114 Ga0207428_10000044 3300027907 Bacteria 198046
115 Ga0207428_10001760 3300027907 Bacteria 22199
116 Ga0207428_10002118 3300027907 Bacteria 19997
117 Ga0268265_10077926 3300028380 Bacteria 2605
118 Ga0307515_10230843 3300028794 Bacteria 1644
119 Ga0265338_10000008 3300028800 Bacteria 481542
120 Ga0265338_10007768 3300028800 Bacteria 13194
121 Ga0265338_10029045 3300028800 Bacteria 5496
122 Ga0265338_10104427 3300028800 Bacteria 2299
123 Ga0265338_10114648 3300028800 Bacteria 2162
124 Ga0265324_10006908 3300029957 Bacteria 4675
125 Ga0265332_10015697 3300031238 Bacteria 3344
126 Ga0265329_10002220 3300031242 Bacteria 8961
127 Ga0265314_10000284 3300031711 Bacteria 73660
128 Ga0316576_10029640 3300031727 Bacteria 3870
129 Ga0316578_10010859 3300031728 Bacteria 4744
130 Ga0307405_10024966 3300031731 Unclassified 3424
131 Ga0316577_10009690 3300031733 Bacteria 5185
132 Ga0307413_10077432 3300031824 Bacteria 2118
133 Ga0307409_100003879 3300031995 Bacteria 8263
134 Ga0307416_100054899 3300032002 Bacteria 3205
135 Ga0307415_100027451 3300032126 Bacteria 3607
136 Ga0373932_0023459 3300035112 Unclassified 1650
137 Ga0373931_0144434 3300035691 Unclassified 1381
138 Ga0373927_0036786 3300035695 Unclassified 3182
139 Ga0316584_0003678 3300036712 Bacteria 10032
140 Ga0395905_0016179 3300037471 Bacteria 7089
141 Ga0400490_18966 3300038726 Bacteria 15977
142 Ga0400490_58975 3300038726 Bacteria 14047
143 Ga0400491_21853 3300038727 Bacteria 2017
144 Ga0400488_57612 3300038741 Bacteria 9337
145 Ga0400483_064156 3300039062 Bacteria 4196
146 Ga0400483_290297 3300039062 Bacteria 24017
147 Ga0400487_44375 3300039110 Bacteria 14403
148 Ga0436365_0142374 3300039437 Bacteria 217743
149 Ga0451807_1658217 3300041486 Bacteria 2284
150 Ga0451577_0015879 3300042876 Bacteria 6985
151 Ga0451577_0025780 3300042876 Bacteria 5332
152 Ga0453684_0114435 3300044712 Bacteria 3270
153 Ga0495592_0075276 3300046454 Bacteria 2451
154 Ga0495620_0001992 3300046515 Bacteria 11941
155 Ga0495630_0021942 3300046517 Unclassified 4716
156 Ga0495634_0171211 3300046642 Unclassified 1364
157 Ga0495599_0058536 3300046678 Bacteria 2410
158 Ga0495684_0078405 3300047471 Bacteria 2507
159 Ga0496107_0146709 3300048910 Unclassified 1745
160 Ga0496112_0084259 3300048915 Unclassified 3144
161 Ga0501031_0020318 3300049568 Bacteria 4330
162 Ga0501033_0031878 3300049570 Unclassified 3957
163 Ga0501034_0000289 3300049571 Bacteria 89918
164 Ga0501037_0076841 3300049573 Unclassified 2424
165 Ga0501038_0131547 3300049574 Bacteria 2054
166 Ga0501039_0125082 3300049575 Bacteria 2017
167 Ga0501040_0004367 3300049576 Bacteria 9191
168 Ga0501040_0030958 3300049576 Unclassified 3616
169 Ga0501040_0181228 3300049576 Bacteria 1493
170 Ga0501041_0009672 3300049577 Bacteria 5684
171 Ga0501042_0002408 3300049578 Bacteria 11463
172 Ga0501071_0024908 3300049587 Bacteria 4187
173 Ga0501072_0019865 3300049588 Bacteria 5198
174 Ga0501072_0034518 3300049588 Bacteria 3965
175 Ga0501075_0010754 3300049591 Bacteria 6445
176 Ga0501076_0062207 3300049592 Unclassified 2972
177 Ga0501077_0022175 3300049593 Bacteria 4022
178 Ga0501081_0027652 3300049743 Bacteria 3825
179 Ga0501081_0113423 3300049743 Bacteria 1925
180 Ga0501083_0076886 3300049744 Bacteria 2215
181 Ga0501044_0003798 3300049823 Bacteria 16955
182 Ga0501044_0009759 3300049823 Bacteria 10443
183 Ga0501044_0019067 3300049823 Bacteria 7344
184 nmdc:mga00v17_11221_c1 3300050491 Bacteria 4921
185 nmdc:mga00v17_16672_c1 3300050491 Bacteria 4144
186 nmdc:mga07m45_14847_c1 3300050496 Bacteria 4158
187 nmdc:mga05p37_173507_c1 3300050507 Bacteria 2628
188 nmdc:mga05p37_26233_c1 3300050507 Bacteria 7086
189 nmdc:mga05p37_41115_c1 3300050507 Bacteria 5677
190 nmdc:mga05p37_48173_c1 3300050507 Bacteria 5242
191 nmdc:mga09592_83185_c1 3300050508 Unclassified 2728
192 nmdc:mga09592_84509_c1 3300050508 Bacteria 2706
193 nmdc:mga06r32_759_c1 3300050510 Bacteria 28416
194 nmdc:mga08y16_114673_c1 3300050511 Unclassified 2805
195 nmdc:mga08y16_22073_c1 3300050511 Bacteria 6721
196 nmdc:mga08y16_29_c1 3300050511 Bacteria 198046
197 nmdc:mga08y16_51824_c1 3300050511 Bacteria 4295
198 nmdc:mga0n895_1340_c1 3300050512 Bacteria 18244
199 nmdc:mga0n895_58507_c1 3300050512 Unclassified 3800
200 nmdc:mga0a205_11086_c1 3300050515 Bacteria 8294
201 nmdc:mga0a205_12987_c2 3300050515 Bacteria 6931
202 nmdc:mga0a205_21140_c1 3300050515 Bacteria 6154
203 nmdc:mga0a205_41450_c1 3300050515 Bacteria 4433
204 Ga0495655_0000144 3300053083 Bacteria 13231
205 Ga0500616_0000362 3300053153 Bacteria 64313
206 Ga0501084_0071118 3300054114 Bacteria 2913
207 Ga0530510_0044119 3300061734 Bacteria 3221
208 Ga0530510_0078299 3300061734 Bacteria 2403

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300041486 Ga0451807_1658217 Ga0451807_1658217_14_1105 360
2 3300046642 Ga0495634_0171211 Ga0495634_0171211_263_1354 360
3 3300049744 Ga0501083_0076886 Ga0501083_0076886_71_1162 360
4 3300038741 Ga0400488_57612 Ga0400488_57612_14_1162 378
5 3300031824 Ga0307413_10077432 Ga0307413_100774322 398
6 3300050511 nmdc:mga08y16_114673_c1 nmdc:mga08y16_114673_c1_1581_2789 399
7 3300005518 Ga0070699_100044660 Ga0070699_1000446602 405
8 3300005546 Ga0070696_100003926 Ga0070696_1000039262 405
9 3300025961 Ga0207712_10185178 Ga0207712_101851782 411
10 3300014326 Ga0157380_10215172 Ga0157380_102151722 415
11 3300039062 Ga0400483_290297 Ga0400483_290297_17479_18774 418
12 3300009094 Ga0111539_10014187 Ga0111539_1001418710 423
13 3300009147 Ga0114129_10008343 Ga0114129_1000834313 423
14 3300014326 Ga0157380_10001622 Ga0157380_100016222 423
15 3300049576 Ga0501040_0004367 Ga0501040_0004367_2642_3970 423
16 3300050507 nmdc:mga05p37_48173_c1 nmdc:mga05p37_48173_c1_418_1743 423
17 3300050512 nmdc:mga0n895_1340_c1 nmdc:mga0n895_1340_c1_9349_10656 423
18 3300050515 nmdc:mga0a205_12987_c2 nmdc:mga0a205_12987_c2_1284_2639 423
19 3300009094 Ga0111539_10037780 Ga0111539_100377802 424
20 3300050511 nmdc:mga08y16_22073_c1 nmdc:mga08y16_22073_c1_1500_2783 424
21 3300053153 Ga0500616_0000362 Ga0500616_0000362_54665_55948 424
22 3300014325 Ga0163163_10240584 Ga0163163_102405842 425
23 3300035691 Ga0373931_0144434 Ga0373931_0144434_13_1290 425
24 3300038727 Ga0400491_21853 Ga0400491_21853_60_1349 425
25 3300049568 Ga0501031_0020318 Ga0501031_0020318_2998_4284 425
26 3300049575 Ga0501039_0125082 Ga0501039_0125082_298_1584 425
27 3300049576 Ga0501040_0181228 Ga0501040_0181228_152_1438 425
28 3300049577 Ga0501041_0009672 Ga0501041_0009672_3753_5039 425
29 3300049587 Ga0501071_0024908 Ga0501071_0024908_712_1998 425
30 3300049588 Ga0501072_0034518 Ga0501072_0034518_1750_3036 425
31 3300049743 Ga0501081_0113423 Ga0501081_0113423_190_1476 425
32 3300050515 nmdc:mga0a205_11086_c1 nmdc:mga0a205_11086_c1_2279_3565 425
33 3300054114 Ga0501084_0071118 Ga0501084_0071118_1001_2287 425
34 3300061734 Ga0530510_0044119 Ga0530510_0044119_900_2186 425
35 3300042876 Ga0451577_0015879 Ga0451577_0015879_5421_6725 429
36 3300044712 Ga0453684_0114435 Ga0453684_0114435_490_1794 429
37 3300036712 Ga0316584_0003678 Ga0316584_0003678_4450_5757 430
38 3300006880 Ga0075429_100120345 Ga0075429_1001203452 436
39 3300050508 nmdc:mga09592_84509_c1 nmdc:mga09592_84509_c1_1271_2626 436
40 3300009094 Ga0111539_10000024 Ga0111539_10000024107 437
41 3300027907 Ga0207428_10000044 Ga0207428_1000004466 437
42 3300050511 nmdc:mga08y16_29_c1 nmdc:mga08y16_29_c1_75614_76969 437
43 3300009551 Ga0105238_10003104 Ga0105238_100031045 439
44 3300025924 Ga0207694_10001892 Ga0207694_100018925 439
45 3300061734 Ga0530510_0078299 Ga0530510_0078299_705_2117 443
46 iso_pu_bacteria 2894772417 2894774294 444
47 3300005293 Ga0065715_10089760 Ga0065715_100897604 446
48 3300005331 Ga0070670_100009635 Ga0070670_1000096357 446
49 3300005334 Ga0068869_100117049 Ga0068869_1001170492 446
50 3300005336 Ga0070680_100012421 Ga0070680_1000124218 446
51 3300005365 Ga0070688_100030697 Ga0070688_1000306972 446
52 3300005440 Ga0070705_100110155 Ga0070705_1001101552 446
53 3300005468 Ga0070707_100055017 Ga0070707_1000550174 446
54 3300005471 Ga0070698_100026978 Ga0070698_1000269782 446
55 3300005471 Ga0070698_100097909 Ga0070698_1000979093 446
56 3300005471 Ga0070698_100232370 Ga0070698_1002323702 446
57 3300005536 Ga0070697_100076914 Ga0070697_1000769142 446
58 3300005547 Ga0070693_100055049 Ga0070693_1000550492 446
59 3300005577 Ga0068857_100032733 Ga0068857_1000327333 446
60 3300005578 Ga0068854_100137591 Ga0068854_1001375912 446
61 3300005719 Ga0068861_100139526 Ga0068861_1001395262 446
62 3300005841 Ga0068863_100042369 Ga0068863_1000423692 446
63 3300005844 Ga0068862_100006490 Ga0068862_1000064901 446
64 3300006028 Ga0070717_10000046 Ga0070717_1000004659 446
65 3300006042 Ga0075368_10002091 Ga0075368_100020913 446
66 3300006048 Ga0075363_100065125 Ga0075363_1000651252 446
67 3300006178 Ga0075367_10058061 Ga0075367_100580612 446
68 3300006353 Ga0075370_10002153 Ga0075370_100021534 446
69 3300006847 Ga0075431_100003605 Ga0075431_1000036052 446
70 3300006852 Ga0075433_10090565 Ga0075433_100905652 446
71 3300009147 Ga0114129_10187674 Ga0114129_101876743 446
72 3300014326 Ga0157380_10038203 Ga0157380_100382033 446
73 3300021384 Ga0213876_10001208 Ga0213876_1000120811 446
74 3300025917 Ga0207660_10004885 Ga0207660_100048857 446
75 3300025925 Ga0207650_10134745 Ga0207650_101347452 446
76 3300025928 Ga0207700_10003368 Ga0207700_100033684 446
77 3300025936 Ga0207670_10199894 Ga0207670_101998942 446
78 3300025942 Ga0207689_10127553 Ga0207689_101275532 446
79 3300026088 Ga0207641_10002645 Ga0207641_1000264510 446
80 3300026116 Ga0207674_10041582 Ga0207674_100415824 446
81 3300026118 Ga0207675_100021261 Ga0207675_1000212614 446
82 3300026118 Ga0207675_100039302 Ga0207675_1000393022 446
83 3300026118 Ga0207675_100096476 Ga0207675_1000964762 446
84 3300027907 Ga0207428_10002118 Ga0207428_1000211812 446
85 3300028380 Ga0268265_10077926 Ga0268265_100779262 446
86 3300028800 Ga0265338_10104427 Ga0265338_101044272 446
87 3300039437 Ga0436365_0142374 Ga0436365_0142374_167706_169064 446
88 3300042876 Ga0451577_0025780 Ga0451577_0025780_1903_3279 446
89 3300046515 Ga0495620_0001992 Ga0495620_0001992_3114_4466 446
90 3300049574 Ga0501038_0131547 Ga0501038_0131547_630_2027 446
91 3300049578 Ga0501042_0002408 Ga0501042_0002408_6580_7977 446
92 3300049591 Ga0501075_0010754 Ga0501075_0010754_1431_2828 446
93 3300049593 Ga0501077_0022175 Ga0501077_0022175_1349_2761 446
94 3300049743 Ga0501081_0027652 Ga0501081_0027652_1555_2952 446
95 3300050491 nmdc:mga00v17_11221_c1 nmdc:mga00v17_11221_c1_1535_2962 446
96 3300050491 nmdc:mga00v17_16672_c1 nmdc:mga00v17_16672_c1_592_1992 446
97 3300050496 nmdc:mga07m45_14847_c1 nmdc:mga07m45_14847_c1_860_2260 446
98 3300050507 nmdc:mga05p37_173507_c1 nmdc:mga05p37_173507_c1_423_1817 446
99 3300050507 nmdc:mga05p37_26233_c1 nmdc:mga05p37_26233_c1_2424_3824 446
100 3300050510 nmdc:mga06r32_759_c1 nmdc:mga06r32_759_c1_70_1422 446
101 3300050512 nmdc:mga0n895_58507_c1 nmdc:mga0n895_58507_c1_2194_3594 446
102 3300050515 nmdc:mga0a205_21140_c1 nmdc:mga0a205_21140_c1_2818_4212 446
103 3300053083 Ga0495655_0000144 Ga0495655_0000144_3148_4488 446
104 3300009094 Ga0111539_10027804 Ga0111539_100278045 447
105 3300014968 Ga0157379_10144926 Ga0157379_101449262 447
106 3300025940 Ga0207691_10026523 Ga0207691_100265231 447
107 3300026121 Ga0207683_10148879 Ga0207683_101488791 447
108 3300031731 Ga0307405_10024966 Ga0307405_100249663 447
109 3300003203 JGI25406J46586_10001564 JGI25406J46586_1000156410 448
110 3300005293 Ga0065715_10005103 Ga0065715_100051033 448
111 3300005329 Ga0070683_100036937 Ga0070683_1000369374 448
112 3300005334 Ga0068869_100052681 Ga0068869_1000526811 448
113 3300005337 Ga0070682_100000003 Ga0070682_10000000376 448
114 3300005338 Ga0068868_100000270 Ga0068868_1000002704 448
115 3300005340 Ga0070689_100004516 Ga0070689_1000045164 448
116 3300005340 Ga0070689_100004596 Ga0070689_1000045966 448
117 3300005353 Ga0070669_100066605 Ga0070669_1000666052 448
118 3300005354 Ga0070675_100019432 Ga0070675_1000194322 448
119 3300005441 Ga0070700_100131117 Ga0070700_1001311172 448
120 3300005459 Ga0068867_100140964 Ga0068867_1001409642 448
121 3300005466 Ga0070685_10027907 Ga0070685_100279072 448
122 3300005543 Ga0070672_100000182 Ga0070672_10000018221 448
123 3300005545 Ga0070695_100012045 Ga0070695_1000120454 448
124 3300005563 Ga0068855_100190615 Ga0068855_1001906152 448
125 3300005577 Ga0068857_100013027 Ga0068857_1000130274 448
126 3300005617 Ga0068859_100158751 Ga0068859_1001587512 448
127 3300005618 Ga0068864_100000013 Ga0068864_100000013147 448
128 3300005840 Ga0068870_10032320 Ga0068870_100323202 448
129 3300005842 Ga0068858_100000667 Ga0068858_10000066715 448
130 3300005985 Ga0081539_10000577 Ga0081539_1000057751 448
131 3300006844 Ga0075428_100025900 Ga0075428_1000259003 448
132 3300006847 Ga0075431_100136407 Ga0075431_1001364072 448
133 3300006847 Ga0075431_100349806 Ga0075431_1003498061 448
134 3300006852 Ga0075433_10008520 Ga0075433_100085205 448
135 3300006880 Ga0075429_100088527 Ga0075429_1000885272 448
136 3300006931 Ga0097620_100158742 Ga0097620_1001587422 448
137 3300007076 Ga0075435_100066745 Ga0075435_1000667453 448
138 3300007076 Ga0075435_100185854 Ga0075435_1001858542 448
139 3300009094 Ga0111539_10002476 Ga0111539_100024766 448
140 3300009094 Ga0111539_10006863 Ga0111539_100068633 448
141 3300009094 Ga0111539_10043401 Ga0111539_100434014 448
142 3300009094 Ga0111539_10497504 Ga0111539_104975041 448
143 3300009098 Ga0105245_10004230 Ga0105245_1000423010 448
144 3300009098 Ga0105245_10007168 Ga0105245_100071682 448
145 3300009147 Ga0114129_10035875 Ga0114129_100358754 448
146 3300009176 Ga0105242_10000470 Ga0105242_1000047012 448
147 3300009177 Ga0105248_10047480 Ga0105248_100474803 448
148 3300009545 Ga0105237_10044015 Ga0105237_100440153 448
149 3300009551 Ga0105238_10007809 Ga0105238_100078092 448
150 3300009553 Ga0105249_10131653 Ga0105249_101316532 448
151 3300013104 Ga0157370_10074129 Ga0157370_100741293 448
152 3300013297 Ga0157378_10028742 Ga0157378_100287422 448
153 3300013306 Ga0163162_10006079 Ga0163162_100060795 448
154 3300013308 Ga0157375_10000030 Ga0157375_10000030150 448
155 3300025924 Ga0207694_10073688 Ga0207694_100736882 448
156 3300025927 Ga0207687_10004984 Ga0207687_100049842 448
157 3300025934 Ga0207686_10001257 Ga0207686_100012573 448
158 3300025936 Ga0207670_10002644 Ga0207670_100026443 448
159 3300025936 Ga0207670_10013343 Ga0207670_100133432 448
160 3300025940 Ga0207691_10002723 Ga0207691_1000272310 448
161 3300025942 Ga0207689_10138162 Ga0207689_101381622 448
162 3300025949 Ga0207667_10200955 Ga0207667_102009552 448
163 3300026023 Ga0207677_10000032 Ga0207677_1000003214 448
164 3300026035 Ga0207703_10000134 Ga0207703_1000013470 448
165 3300026078 Ga0207702_10039185 Ga0207702_100391853 448
166 3300026095 Ga0207676_10000030 Ga0207676_1000003020 448
167 3300026116 Ga0207674_10019960 Ga0207674_100199604 448
168 3300027907 Ga0207428_10001760 Ga0207428_1000176012 448
169 3300028794 Ga0307515_10230843 Ga0307515_102308431 448
170 3300028800 Ga0265338_10000008 Ga0265338_10000008128 448
171 3300028800 Ga0265338_10007768 Ga0265338_1000776812 448
172 3300028800 Ga0265338_10029045 Ga0265338_100290453 448
173 3300028800 Ga0265338_10114648 Ga0265338_101146482 448
174 3300029957 Ga0265324_10006908 Ga0265324_100069082 448
175 3300031238 Ga0265332_10015697 Ga0265332_100156972 448
176 3300031242 Ga0265329_10002220 Ga0265329_100022202 448
177 3300031711 Ga0265314_10000284 Ga0265314_1000028427 448
178 3300031727 Ga0316576_10029640 Ga0316576_100296402 448
179 3300031728 Ga0316578_10010859 Ga0316578_100108593 448
180 3300031733 Ga0316577_10009690 Ga0316577_100096903 448
181 3300031995 Ga0307409_100003879 Ga0307409_1000038792 448
182 3300032002 Ga0307416_100054899 Ga0307416_1000548992 448
183 3300032126 Ga0307415_100027451 Ga0307415_1000274513 448
184 3300035112 Ga0373932_0023459 Ga0373932_0023459_17_1363 448
185 3300035695 Ga0373927_0036786 Ga0373927_0036786_457_1812 448
186 3300037471 Ga0395905_0016179 Ga0395905_0016179_1851_3224 448
187 3300038726 Ga0400490_18966 Ga0400490_18966_5077_6438 448
188 3300038726 Ga0400490_58975 Ga0400490_58975_5715_7076 448
189 3300039062 Ga0400483_064156 Ga0400483_064156_2170_3531 448
190 3300039110 Ga0400487_44375 Ga0400487_44375_7866_9227 448
191 3300046454 Ga0495592_0075276 Ga0495592_0075276_884_2239 448
192 3300046517 Ga0495630_0021942 Ga0495630_0021942_64_1419 448
193 3300046678 Ga0495599_0058536 Ga0495599_0058536_762_2117 448
194 3300047471 Ga0495684_0078405 Ga0495684_0078405_341_1696 448
195 3300048910 Ga0496107_0146709 Ga0496107_0146709_201_1556 448
196 3300048915 Ga0496112_0084259 Ga0496112_0084259_711_2057 448
197 3300049570 Ga0501033_0031878 Ga0501033_0031878_26_1381 448
198 3300049571 Ga0501034_0000289 Ga0501034_0000289_34106_35473 448
199 3300049573 Ga0501037_0076841 Ga0501037_0076841_144_1499 448
200 3300049576 Ga0501040_0030958 Ga0501040_0030958_919_2274 448
201 3300049588 Ga0501072_0019865 Ga0501072_0019865_3612_4967 448
202 3300049592 Ga0501076_0062207 Ga0501076_0062207_326_1681 448
203 3300049823 Ga0501044_0003798 Ga0501044_0003798_3400_4755 448
204 3300049823 Ga0501044_0009759 Ga0501044_0009759_3791_5164 448
205 3300049823 Ga0501044_0019067 Ga0501044_0019067_1696_3051 448
206 3300050507 nmdc:mga05p37_41115_c1 nmdc:mga05p37_41115_c1_3311_4666 448
207 3300050508 nmdc:mga09592_83185_c1 nmdc:mga09592_83185_c1_83_1444 448
208 3300050511 nmdc:mga08y16_51824_c1 nmdc:mga08y16_51824_c1_2405_3751 448
209 3300050515 nmdc:mga0a205_41450_c1 nmdc:mga0a205_41450_c1_1304_2650 448

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

222

386

0.87

PF02310

B12-binding

B12 binding domain

83

181

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wtf-assembly1.cif.gz_A structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with tryptophan substrate and sam analog (aza-sam) bound 0.7754 2 351
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.7599 2 401
5fep-assembly1.cif.gz_A hyde from t. maritima in complex with (2r,4r)-metda 0.7482 158 344
3ciw-assembly1.cif.gz_A x-ray structure of the [fefe]-hydrogenase maturase hyde from thermotoga maritima 0.7479 158 344
3iix-assembly1.cif.gz_A x-ray structure of the fefe-hydrogenase maturase hyde from t. maritima in complex with methionine and 5'deoxyadenosine 0.7479 158 344
ID Description Score Start End Superfamily
af_P96395_164_380_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8735 158 352 3.80.30.20
af_Q58275_166_383_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8328 160 349 3.80.30.20
af_P96395_164_380_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.7876 158 352 3.80.30.20
af_Q58882_171_402_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.7845 159 346 3.80.30.20
af_Q59015_207_434_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.7823 168 346 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A1V5NWL3-F1-model_v4 DUF4070 domain-containing protein 0.9629 252 436 GO:0005829
GO:0051536
AF-A0A6N6KCH3-F1-model_v4 Radical SAM protein 0.9586 1 435 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051539
AF-A0A7X7MD64-F1-model_v4 B12-binding domain-containing radical SAM protein 0.9551 159 435 GO:0003824
GO:0005829
GO:0051539
AF-A0A6M1CWD1-F1-model_v4 deleted 0.9501 85 211
AF-A0A6N6KCH3-F1-model_v4 Radical SAM protein 0.9478 1 435 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
90 0.9 High
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Predicted Structure (AlphaFold2)

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