F319855

General Info

Members Datasets Scaffolds Average Seq Length
210 138 416 667

Family's Representative Sequence

Representative Sequence 3300003354|JGI25160J50197_1000437|JGI25160J50197_10004378
Length 716
Sequence VLIRCNLIFIRAIFNDDLTEIKFIVVLFAFPNVLYAINYHNMKITALLVLLLTCTLCVNAQTKSKTVTKQNYVTSRAPLRQNAYIELPLGAIKPQGWLKEMLVRQKNGATGNLDKLYPLVMNERNGWLGGDGDQWERGPYWIDGLLPLAYILDDKALIEKTKPWVEWAINSQQPDGYFGPSKDYSGEPGLQRDNSRDWWPKMVVLKVLQQYYSATGDKRVIQLMTNYFKYQLKELPSKPLDHWTFWARYRAGDNLAVVYWLYNITGDQFLLQLGDLLHKQTFDFTDAFLNTNMLATSGSIHCVNLAQGIKEPIIYYQHHPEKKYLDATKKGFDDIRKYDGLAHGLYGGDEALHGNNPTQGSELCSAVEMMFSLENMLGITGNTDFADRLEKIAFNALPTQASDDYLSRQYFQQANQVMITRHFRNFDVNHGGTDVCYGLLSGYPCCTSNMHQGWPKFTQNLWYATPDKGVAALVYSPSEVKLKVANGEEVSFKEETSYPFEETVKFTLSSGNNKPLNFPFHLRIPGWCNKGAVKVNGKAYAEAGSGQIIKISRAWTSGDVVELTLPMHIFKNTWYENSVSIERGPVTYALKIGEETKKVQNDKDPIDYGDSYLEIRPTTPWNYGLIATKDDQLEQEYKIEKNAPLSDYPWNPESAPLIIKTKAKRIPSWQLYNEMAGPIPYSRIYNMEASKDEEEVVLIPYGCSNLRISQFPVINK

Samples

Sample ID Description Type Environment
1 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
53 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
57 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
58 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
86 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
87 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
88 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
89 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
94 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
114 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
115 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
116 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
117 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
118 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
119 2738541284 Pedobacter sp. YR016 Isolate Unclassified
120 2739367663 Pedobacter sp. YR510 Isolate Unclassified
121 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
122 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
123 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
124 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
125 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
126 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
127 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
128 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
129 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
130 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
131 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
132 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
133 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
134 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
135 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
136 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
137 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
138 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.52
Metatranscriptomes 0
Isolates 10.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.24
Nodule 0
Rhizoplane 0
Rhizosphere 73.81
Stem 0
Stem Tuber 0
Unclassified 3.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25160J50197_1000437 3300003354 Bacteria 26144
2 SwRhRL2b_contig_30186 2162886007 Bacteria 12113
3 JGI24739J22299_10000784 3300001989 Bacteria 11590
4 JGI25154J39366_1000037 3300002738 Bacteria 157573
5 rootH2_10002788 3300003320 Bacteria 40387
6 rootH2_10004991 3300003320 Bacteria 34166
7 rootH2_10080829 3300003320 Bacteria 7685
8 rootL2_10008471 3300003322 Bacteria 11342
9 JGI25160J50197_1000760 3300003354 Bacteria 17411
10 Ga0055526_1007842 3300003771 Bacteria 5460
11 Ga0055526_1008087 3300003771 Bacteria 5306
12 Ga0055536_1000009 3300003781 Bacteria 311572
13 Ga0055528_1000438 3300003790 Bacteria 33416
14 Ga0055530_10000718 3300003791 Bacteria 27839
15 Ga0055530_10002250 3300003791 Bacteria 12720
16 Ga0065165_1000022 3300005262 Bacteria 253404
17 Ga0065165_1000661 3300005262 Bacteria 49697
18 Ga0065714_10002353 3300005288 Bacteria 22685
19 Ga0065714_10002537 3300005288 Bacteria 27651
20 Ga0065714_10002933 3300005288 Bacteria 54064
21 Ga0065714_10064431 3300005288 Bacteria 135024
22 Ga0065704_10000227 3300005289 Bacteria 66518
23 Ga0065704_10075664 3300005289 Bacteria 5474
24 Ga0065704_10077927 3300005289 Bacteria 4581
25 Ga0070658_10000025 3300005327 Bacteria 174551
26 Ga0070676_10000879 3300005328 Bacteria 14827
27 Ga0070683_100002836 3300005329 Bacteria 13876
28 Ga0070683_100055129 3300005329 Bacteria 3688
29 Ga0068868_100012308 3300005338 Bacteria 6251
30 Ga0070660_100027708 3300005339 Bacteria 4230
31 Ga0070671_100011480 3300005355 Bacteria 7121
32 Ga0070673_100009338 3300005364 Bacteria 6580
33 Ga0070659_100001110 3300005366 Bacteria 19630
34 Ga0070659_100077147 3300005366 Bacteria 2657
35 Ga0070678_100002165 3300005456 Bacteria 10663
36 Ga0070662_100000083 3300005457 Bacteria 51358
37 Ga0068867_100001558 3300005459 Bacteria 15909
38 Ga0068867_100016412 3300005459 Bacteria 5257
39 Ga0070679_100003749 3300005530 Bacteria 13935
40 Ga0070684_100002591 3300005535 Bacteria 13355
41 Ga0070684_100009190 3300005535 Bacteria 7776
42 Ga0068853_100001897 3300005539 Bacteria 15413
43 Ga0068853_100041633 3300005539 Bacteria 3925
44 Ga0070665_100000083 3300005548 Bacteria 181044
45 Ga0070665_100072604 3300005548 Unclassified 3448
46 Ga0068855_100001620 3300005563 Bacteria 28236
47 Ga0068855_100001913 3300005563 Bacteria 25829
48 Ga0068855_100014215 3300005563 Bacteria 9589
49 Ga0068856_100018748 3300005614 Bacteria 6709
50 Ga0068852_100000571 3300005616 Bacteria 24216
51 Ga0068859_100035734 3300005617 Bacteria 4987
52 Ga0068870_10017161 3300005840 Bacteria 3474
53 Ga0097621_100000344 3300006237 Bacteria 31894
54 Ga0068871_100088419 3300006358 Unclassified 2578
55 Ga0068865_100000373 3300006881 Bacteria 24834
56 Ga0097620_100035733 3300006931 Bacteria 4987
57 Ga0105240_10004483 3300009093 Bacteria 21243
58 Ga0105240_10007086 3300009093 Bacteria 16342
59 Ga0105240_10007667 3300009093 Bacteria 15627
60 Ga0105240_10048766 3300009093 Bacteria 5350
61 Ga0105241_10000647 3300009174 Bacteria 26103
62 Ga0105241_10001709 3300009174 Bacteria 16700
63 Ga0105237_10000168 3300009545 Bacteria 92212
64 Ga0105238_10002974 3300009551 Bacteria 16920
65 Ga0105239_10000106 3300010375 Bacteria 117256
66 Ga0105239_10188935 3300010375 Bacteria 2306
67 Ga0157373_10001543 3300013100 Bacteria 17577
68 Ga0157373_10001982 3300013100 Bacteria 15525
69 Ga0157373_10007567 3300013100 Bacteria 8072
70 Ga0157371_10000229 3300013102 Bacteria 81458
71 Ga0157371_10001084 3300013102 Bacteria 29465
72 Ga0157371_10003048 3300013102 Bacteria 15549
73 Ga0157371_10011953 3300013102 Bacteria 6657
74 Ga0157370_10000187 3300013104 Bacteria 77559
75 Ga0157370_10000929 3300013104 Bacteria 37165
76 Ga0157370_10011189 3300013104 Bacteria 9407
77 Ga0157370_10012339 3300013104 Bacteria 8868
78 Ga0157370_10024224 3300013104 Bacteria 6014
79 Ga0157370_10035673 3300013104 Bacteria 4831
80 Ga0157369_10004234 3300013105 Bacteria 16998
81 Ga0157369_10018240 3300013105 Bacteria 7870
82 Ga0157369_10054247 3300013105 Bacteria 4329
83 Ga0157374_10000445 3300013296 Bacteria 37588
84 Ga0157374_10000520 3300013296 Bacteria 34630
85 Ga0157378_10037064 3300013297 Bacteria 4318
86 Ga0163162_10000467 3300013306 Bacteria 37494
87 Ga0157372_10000051 3300013307 Bacteria 136437
88 Ga0157372_10001627 3300013307 Bacteria 24370
89 Ga0157372_10008058 3300013307 Bacteria 11209
90 Ga0157372_10022465 3300013307 Bacteria 6827
91 Ga0157372_10024569 3300013307 Bacteria 6548
92 Ga0157372_10044277 3300013307 Unclassified 4931
93 Ga0157372_10135191 3300013307 Bacteria 2839
94 Ga0157375_10000834 3300013308 Bacteria 26970
95 Ga0182008_10000009 3300014497 Bacteria 331416
96 Ga0182005_1000023 3300015265 Bacteria 246328
97 Ga0163161_10000108 3300017792 Bacteria 78805
98 Ga0213872_10004745 3300021361 Bacteria 7125
99 Ga0209436_101586 3300025208 Bacteria 7648
100 Ga0209436_102432 3300025208 Bacteria 5612
101 Ga0209646_1000003 3300025246 Bacteria 1160860
102 Ga0209026_1000166 3300025250 Bacteria 101237
103 Ga0209233_1001789 3300025261 Bacteria 8280
104 Ga0209673_1000287 3300025273 Bacteria 94132
105 Ga0209130_1003233 3300025284 Bacteria 7159
106 Ga0209676_1000001 3300025292 Bacteria 1852142
107 Ga0209676_1002177 3300025292 Bacteria 14720
108 Ga0209564_1002249 3300025295 Bacteria 15841
109 Ga0209564_1003883 3300025295 Bacteria 9606
110 Ga0209758_1002873 3300025297 Bacteria 16695
111 Ga0209758_1017305 3300025297 Bacteria 3600
112 Ga0209050_1000018 3300025298 Bacteria 723263
113 Ga0209050_1000755 3300025298 Bacteria 46537
114 Ga0207426_1000026 3300025302 Bacteria 515228
115 Ga0207426_1000073 3300025302 Bacteria 323756
116 Ga0207426_1000720 3300025302 Bacteria 38303
117 Ga0207426_1000846 3300025302 Bacteria 32226
118 Ga0209257_1000004 3300025304 Bacteria 1678347
119 Ga0209257_1002940 3300025304 Bacteria 15671
120 Ga0207688_10047576 3300025901 Unclassified 2394
121 Ga0207647_10000098 3300025904 Bacteria 67170
122 Ga0207647_10000137 3300025904 Bacteria 58128
123 Ga0207645_10000185 3300025907 Bacteria 49988
124 Ga0207705_10000088 3300025909 Bacteria 113694
125 Ga0207654_10001088 3300025911 Bacteria 14739
126 Ga0207695_10000894 3300025913 Bacteria 54057
127 Ga0207695_10003475 3300025913 Bacteria 22169
128 Ga0207695_10006274 3300025913 Bacteria 15476
129 Ga0207695_10008665 3300025913 Bacteria 12691
130 Ga0207695_10035904 3300025913 Bacteria 5366
131 Ga0207694_10046134 3300025924 Unclassified 3368
132 Ga0207690_10001941 3300025932 Bacteria 12675
133 Ga0207706_10000176 3300025933 Bacteria 70917
134 Ga0207704_10000055 3300025938 Bacteria 78858
135 Ga0207691_10034756 3300025940 Unclassified 4684
136 Ga0207661_10002948 3300025944 Bacteria 11771
137 Ga0207667_10000365 3300025949 Bacteria 61074
138 Ga0207667_10031881 3300025949 Bacteria 5683
139 Ga0207702_10011882 3300026078 Bacteria 7249
140 Ga0207648_10000775 3300026089 Bacteria 36025
141 Ga0207648_10024224 3300026089 Bacteria 5422
142 Ga0207683_10028859 3300026121 Bacteria 4800
143 Ga0207683_10092565 3300026121 Bacteria 2694
144 Ga0268266_10000095 3300028379 Bacteria 186169
145 Ga0307517_10021095 3300028786 Bacteria 8256
146 Ga0316182_1004964 3300030745 Bacteria 3763
147 Ga0316576_10002069 3300031727 Bacteria 11263
148 Ga0316578_10000016 3300031728 Bacteria 36202
149 Ga0316577_10000554 3300031733 Bacteria 15200
150 Ga0307412_10000181 3300031911 Bacteria 44202
151 Ga0307414_10000367 3300032004 Bacteria 24700
152 Ga0307510_10002895 3300033180 Bacteria 19752
153 Ga0316574_0050115 3300035398 Bacteria 2598
154 Ga0316584_0001711 3300036712 Bacteria 13443
155 Ga0395899_0014436 3300037312 Bacteria 6029
156 Ga0395900_0000014 3300037418 Bacteria 386513
157 Ga0395900_0001824 3300037418 Bacteria 24321
158 Ga0395898_0005301 3300037466 Bacteria 13944
159 Ga0395898_0011015 3300037466 Bacteria 9422
160 Ga0395905_0001097 3300037471 Bacteria 34059
161 Ga0395901_0000523 3300038443 Bacteria 44364
162 Ga0395901_0050333 3300038443 Bacteria 4329
163 Ga0436361_0963514 3300039447 Bacteria 10030
164 Ga0451577_0000010 3300042876 Bacteria 616686
165 Ga0451577_0000404 3300042876 Bacteria 78335
166 Ga0451577_0002169 3300042876 Bacteria 23990
167 Ga0466972_0000027 3300044658 Bacteria 174082
168 Ga0466972_0025778 3300044658 Bacteria 2913
169 Ga0453683_0003788 3300044673 Bacteria 11017
170 Ga0453684_0000130 3300044712 Bacteria 331761
171 Ga0453684_0000413 3300044712 Bacteria 174924
172 Ga0453684_0000574 3300044712 Bacteria 137306
173 Ga0453684_0004576 3300044712 Bacteria 28873
174 Ga0466970_0000405 3300044765 Bacteria 20994
175 Ga0466959_0024508 3300045049 Bacteria 4470
176 Ga0451576_0000353 3300045051 Bacteria 110215
177 Ga0451576_0000411 3300045051 Bacteria 99403
178 Ga0495631_0004472 3300046518 Bacteria 7445
179 Ga0495661_0050471 3300046665 Unclassified 2518
180 Ga0495687_000345 3300047443 Bacteria 59578
181 Ga0496126_0008918 3300048929 Bacteria 10740
182 Ga0501047_0138463 3300049581 Bacteria 2313
183 Ga0501241_003008 3300049758 Bacteria 3222
184 Ga0500651_0000466 3300053093 Bacteria 21392
185 Ga0500608_001756 3300053122 Bacteria 7746
186 Ga0500622_0002782 3300053156 Bacteria 12296
187 2522552899 2522125168 Bacteria 7376607
188 2586209852 2585427687 Bacteria 5544917
189 2738762875 2738541284 Bacteria 5199923
190 2739644806 2739367663 Bacteria 5040914
191 2776614437 2775506987 Bacteria 5373360
192 2819572368 2818991442 Bacteria 8318214
193 2819678808 2818991460 Bacteria 7595395
194 2821140264 2821136567 Bacteria 8080116
195 2842907597 2842903701 Bacteria 6986368
196 2852626841 2852623160 Bacteria 4376875
197 2884794179 2884791551 Bacteria 8511252
198 2884938107 2884933994 Bacteria 4535041
199 2896111501 2896109856 Bacteria 7140722
200 2904472389 2904467357 Bacteria 8057758
201 2910247084 2910245624 Bacteria 6935613
202 2911139779 2911138879 Bacteria 5811561
203 2929182280 2929177148 Bacteria 7883697
204 2929926974 2929921140 Bacteria 8649150
205 2945978199 2945977869 Bacteria 7777518
206 2946015940 2946013367 Bacteria 7766675
207 3003235430 3003233435 Bacteria 4458031
208 8003154468 8003151029 Bacteria 8187759
209 JGI25160J50197_1000437
210 SwRhRL2b_contig_30186
211 JGI24739J22299_10000784
212 JGI25154J39366_1000037
213 rootH2_10002788
214 rootH2_10004991
215 rootH2_10080829
216 rootL2_10008471
217 JGI25160J50197_1000760
218 Ga0055526_1007842
219 Ga0055526_1008087
220 Ga0055536_1000009
221 Ga0055528_1000438
222 Ga0055530_10000718
223 Ga0055530_10002250
224 Ga0065165_1000022
225 Ga0065165_1000661
226 Ga0065714_10002353
227 Ga0065714_10002537
228 Ga0065714_10002933
229 Ga0065714_10064431
230 Ga0065704_10000227
231 Ga0065704_10075664
232 Ga0065704_10077927
233 Ga0070658_10000025
234 Ga0070676_10000879
235 Ga0070683_100002836
236 Ga0070683_100055129
237 Ga0068868_100012308
238 Ga0070660_100027708
239 Ga0070671_100011480
240 Ga0070673_100009338
241 Ga0070659_100001110
242 Ga0070659_100077147
243 Ga0070678_100002165
244 Ga0070662_100000083
245 Ga0068867_100001558
246 Ga0068867_100016412
247 Ga0070679_100003749
248 Ga0070684_100002591
249 Ga0070684_100009190
250 Ga0068853_100001897
251 Ga0068853_100041633
252 Ga0070665_100000083
253 Ga0070665_100072604
254 Ga0068855_100001620
255 Ga0068855_100001913
256 Ga0068855_100014215
257 Ga0068856_100018748
258 Ga0068852_100000571
259 Ga0068859_100035734
260 Ga0068870_10017161
261 Ga0097621_100000344
262 Ga0068871_100088419
263 Ga0068865_100000373
264 Ga0097620_100035733
265 Ga0105240_10004483
266 Ga0105240_10007086
267 Ga0105240_10007667
268 Ga0105240_10048766
269 Ga0105241_10000647
270 Ga0105241_10001709
271 Ga0105237_10000168
272 Ga0105238_10002974
273 Ga0105239_10000106
274 Ga0105239_10188935
275 Ga0157373_10001543
276 Ga0157373_10001982
277 Ga0157373_10007567
278 Ga0157371_10000229
279 Ga0157371_10001084
280 Ga0157371_10003048
281 Ga0157371_10011953
282 Ga0157370_10000187
283 Ga0157370_10000929
284 Ga0157370_10011189
285 Ga0157370_10012339
286 Ga0157370_10024224
287 Ga0157370_10035673
288 Ga0157369_10004234
289 Ga0157369_10018240
290 Ga0157369_10054247
291 Ga0157374_10000445
292 Ga0157374_10000520
293 Ga0157378_10037064
294 Ga0163162_10000467
295 Ga0157372_10000051
296 Ga0157372_10001627
297 Ga0157372_10008058
298 Ga0157372_10022465
299 Ga0157372_10024569
300 Ga0157372_10044277
301 Ga0157372_10135191
302 Ga0157375_10000834
303 Ga0182008_10000009
304 Ga0182005_1000023
305 Ga0163161_10000108
306 Ga0213872_10004745
307 Ga0209436_101586
308 Ga0209436_102432
309 Ga0209646_1000003
310 Ga0209026_1000166
311 Ga0209233_1001789
312 Ga0209673_1000287
313 Ga0209130_1003233
314 Ga0209676_1000001
315 Ga0209676_1002177
316 Ga0209564_1002249
317 Ga0209564_1003883
318 Ga0209758_1002873
319 Ga0209758_1017305
320 Ga0209050_1000018
321 Ga0209050_1000755
322 Ga0207426_1000026
323 Ga0207426_1000073
324 Ga0207426_1000720
325 Ga0207426_1000846
326 Ga0209257_1000004
327 Ga0209257_1002940
328 Ga0207688_10047576
329 Ga0207647_10000098
330 Ga0207647_10000137
331 Ga0207645_10000185
332 Ga0207705_10000088
333 Ga0207654_10001088
334 Ga0207695_10000894
335 Ga0207695_10003475
336 Ga0207695_10006274
337 Ga0207695_10008665
338 Ga0207695_10035904
339 Ga0207694_10046134
340 Ga0207690_10001941
341 Ga0207706_10000176
342 Ga0207704_10000055
343 Ga0207691_10034756
344 Ga0207661_10002948
345 Ga0207667_10000365
346 Ga0207667_10031881
347 Ga0207702_10011882
348 Ga0207648_10000775
349 Ga0207648_10024224
350 Ga0207683_10028859
351 Ga0207683_10092565
352 Ga0268266_10000095
353 Ga0307517_10021095
354 Ga0316182_1004964
355 Ga0316576_10002069
356 Ga0316578_10000016
357 Ga0316577_10000554
358 Ga0307412_10000181
359 Ga0307414_10000367
360 Ga0307510_10002895
361 Ga0316574_0050115
362 Ga0316584_0001711
363 Ga0395899_0014436
364 Ga0395900_0000014
365 Ga0395900_0001824
366 Ga0395898_0005301
367 Ga0395898_0011015
368 Ga0395905_0001097
369 Ga0395901_0000523
370 Ga0395901_0050333
371 Ga0436361_0963514
372 Ga0451577_0000010
373 Ga0451577_0000404
374 Ga0451577_0002169
375 Ga0466972_0000027
376 Ga0466972_0025778
377 Ga0453683_0003788
378 Ga0453684_0000130
379 Ga0453684_0000413
380 Ga0453684_0000574
381 Ga0453684_0004576
382 Ga0466970_0000405
383 Ga0466959_0024508
384 Ga0451576_0000353
385 Ga0451576_0000411
386 Ga0495631_0004472
387 Ga0495661_0050471
388 Ga0495687_000345
389 Ga0496126_0008918
390 Ga0501047_0138463
391 Ga0501241_003008
392 Ga0500651_0000466
393 Ga0500608_001756
394 Ga0500622_0002782
395 2522552899
396 2586209852
397 2738762875
398 2739644806
399 2776614437
400 2819572368
401 2819678808
402 2821140264
403 2842907597
404 2852626841
405 2884794179
406 2884938107
407 2896111501
408 2904472389
409 2910247084
410 2911139779
411 2929182280
412 2929926974
413 2945978199
414 2946015940
415 3003235430
416 8003154468

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20736

Glyco_hydro127M

Beta-L-arabinofuranosidase, GH127 middle domain

469

567

0.92

PF07944

Beta-AFase-like_GH127_cat

Beta-L-arabinofuranosidase, GH127 catalytic domain

59

459

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mqo-assembly1.cif.gz_A glycoside hydrolase bt_1003 0.7631 13 650
5mqo-assembly1.cif.gz_A glycoside hydrolase bt_1003 0.7538 13 650
4qjy-assembly1.cif.gz_B crystal structure of native ara127n, a gh127 beta-l-arabinofuranosidase from geobacillus stearothermophilus t6 0.7069 28 649
7bzl-assembly1.cif.gz_A gh127 beta-l-arabinofuranosidase hypba1 covalently complexed with beta-l-arabinofuranose-configured cyclophellitol 0.7006 28 649
3wrf-assembly1.cif.gz_A the crystal structure of native hypba1 from bifidobacterium longum jcm 1217 0.6986 28 653
ID Description Score Start End Superfamily
af_I1MD97_105_629_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.744 28 524 1.50.10.10
af_I1MD97_105_629_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7069 28 524 1.50.10.10
af_O53432_177_332_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.6968 245 351 1.50.10.20
af_I1JQI7_235_534_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.6748 242 352 1.50.10.10
4wu0A00 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.6714 141 339 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A060CQB9-F1-model_v4 CAZy families CBM13 protein 0.9955 141 248 GO:0005975
AF-A0A2P8GI02-F1-model_v4 Beta-L-arabinofuranosidase (Glycosyl hydrolase family 127) 0.9953 139 652 GO:0005975
GO:0016787
AF-A0A2P8GI02-F1-model_v4 Beta-L-arabinofuranosidase (Glycosyl hydrolase family 127) 0.9914 139 652 GO:0005975
GO:0016787
AF-A0A7G5H6W4-F1-model_v4 Glycoside hydrolase family 127 protein 0.9908 21 652 GO:0005975
GO:0016787
AF-A0A519VSJ3-F1-model_v4 Glycoside hydrolase family 127 protein 0.9906 147 517 GO:0005975

Map