F320123

General Info

Members Datasets Scaffolds Average Seq Length
210 142 420 972

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100015636|Ga0070665_1000156363
Length 1091
Sequence LESGSIRTGICAAIAIVAACGSTPVFAQVRQFDVPSEDAGKSIPEFARQAQIQVIAPGDQLHGVITPPIKGPYDVFVALDLMLKGTGLKVSHSADGIVTISLPEEKKGEEREMSPSSLKKSTSVLALLFSFLTGNPVSAQSASVPSAAQAPDNDAAAASTESVVVKGLKDSLLSAMDFKRKTVEVVDSIVAEDIGKLSDSNVAETMTRIPGVQGYRYGGEGASPVGTGSGLTIRGLSGQTASRVDGRAYFTAGQREFNIEGAVPGMIAGIDVFKNPSSDHIEGGIGGLVNIRTRKPLDFSDATFSAGITTRYNELVHSVEPDYFAMLADRWSMGHLGEMGLAVSANYQLSHNRSDNNPAGGGTNIVNPIASTDTANYTAANGCNMAYLGAANITCLQNLSNTQALALSSAQRANLVSLASVKTPVNEEDIMRTRIGFDGAFQWQLTPTFEAYAQTTFDYYQYHQNYRFMNIADTQTVQNLTVMPYTLGTGLAARDPADLLLSGQRFKSGTFLGDTASTTGGDEHRPYQTLIGATGFKWNATEKLDVKLDLSYVTSDQTQDNRSATMNSAAGLIWNVARDMTTSPHGINFAGPDLSDPRTWVLNNYTNGTNQVWHDDGYAIQLDLDYKVEIPFFNLIKFGGRYATQNENYHNYSFTAARNLTTDGLALATNQSNGISAASSTVQDLMQGSPVNWMGGEAGYSGGFLVYSPDALLHDNVRNRFPVAGIPSADSLPEQIAARRFAREQTLAGYIVGEFAAFDNVVEGNVGVRVVEAWDLARAMVANVPGPGFTPNTQNTSRVDVLPSANVVIHLYDDLQLKLGYGKGLTRPDFGLLNPTVVVSTSAGTGTVGNPQLRPLTADSYDVTLEYYFRPGSSVVFGAFDKEIKGFFSNIASCQAVNSAPAYTGLTPNGCSGGQYFITQTVNAAPGYARGIEVSGTTFFDFLPGVWSHFGVQGNYSYVETANPIRFATNGPLITLPQTFQSKNNASISGLYEDDTLSARLIYTYRSDFNFNGFAANPIDSRTVHGYGLLDASASYEIGYNTSLTASVSNITNAAPNRYQGEQGAYTTPFERQHYDNGRIYSLGLRFRIGG

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
23 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
24 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
35 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
37 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
40 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
62 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
63 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
66 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
72 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
73 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
74 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
75 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
76 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
77 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
78 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
79 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
80 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
81 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
82 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
83 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
84 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
85 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
86 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
87 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
88 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
89 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
90 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
91 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
92 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
93 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
97 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
98 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
99 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
100 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
101 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
102 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
103 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
104 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
105 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
106 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
107 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
108 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
112 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
113 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
114 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
115 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
116 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
117 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
120 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
121 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
122 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
123 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
124 2643221556 Massilia sp. Root1485 Isolate Unclassified
125 2643221583 Caulobacter sp. Root655 Isolate Unclassified
126 2643221640 Caulobacter sp. Root342 Isolate Unclassified
127 2643221642 Caulobacter sp. Root343 Isolate Unclassified
128 2643221645 Massilia sp. Root351 Isolate Unclassified
129 2643221664 Massilia sp. Root418 Isolate Unclassified
130 2643221684 Massilia sp. Root133 Isolate Unclassified
131 2738541280 Massilia sp. GV090 Isolate Unclassified
132 2738541300 Massilia sp. GV016 Isolate Unclassified
133 2738543018 Massilia sp. GV045 Isolate Unclassified
134 2738543030 Massilia sp. GV097 Isolate Unclassified
135 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
136 2842711865 Duganella sp. R-73148 Isolate Unclassified
137 2849560528 Caulobacter zeae 410 Isolate Unclassified
138 2851153111 Caulobacter radicis 736 Isolate Unclassified
139 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
140 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
141 2904424332 Duganella sp. 1411 Isolate Rhizosphere
142 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.05
Metatranscriptomes 0.95
Isolates 10

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.57
Nodule 0.95
Rhizoplane 0.48
Rhizosphere 77.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100015636 3300005548 Bacteria 7622
2 JGI25152J39213_1000002 3300002773 Bacteria 219237
3 JGI25150J39212_1000038 3300002774 Bacteria 88070
4 Ga0006759J45824_1036948 3300003163 Bacteria 3107
5 rootL2_10038608 3300003322 Bacteria 8056
6 rootL2_10063534 3300003322 Bacteria 13472
7 rootH1_10016249 3300003323 Bacteria 19921
8 Ga0007409J51694_1018550 3300003575 Bacteria 3065
9 Ga0055529_1000128 3300003763 Bacteria 108143
10 Ga0055526_1000025 3300003771 Bacteria 154279
11 Ga0055531_10000564 3300003794 Bacteria 32585
12 Ga0070671_100002521 3300005355 Bacteria 14192
13 Ga0070667_100002320 3300005367 Bacteria 16669
14 Ga0070665_100009841 3300005548 Bacteria 9663
15 Ga0068857_100002475 3300005577 Bacteria 15098
16 Ga0068852_100042647 3300005616 Bacteria 3842
17 Ga0068859_100000838 3300005617 Bacteria 31229
18 Ga0068864_100024120 3300005618 Bacteria 5114
19 Ga0068863_100022062 3300005841 Bacteria 6080
20 Ga0068863_100026640 3300005841 Bacteria 5513
21 Ga0068858_100001046 3300005842 Bacteria 28583
22 Ga0068858_100005986 3300005842 Bacteria 11875
23 Ga0068860_100001530 3300005843 Bacteria 24921
24 Ga0075370_10000495 3300006353 Bacteria 14903
25 Ga0097620_100000838 3300006931 Bacteria 31229
26 Ga0099826_10000001 3300006948 Bacteria 1155201
27 Ga0105244_10000862 3300009036 Bacteria 25605
28 Ga0105247_10000626 3300009101 Bacteria 28419
29 Ga0105243_10020928 3300009148 Bacteria 4964
30 Ga0105241_10019572 3300009174 Bacteria 4993
31 Ga0105242_10017521 3300009176 Bacteria 5584
32 Ga0105248_10009479 3300009177 Bacteria 10715
33 Ga0105237_10009630 3300009545 Bacteria 10342
34 Ga0105249_10018328 3300009553 Bacteria 6224
35 Ga0105239_10052246 3300010375 Bacteria 4481
36 Ga0163163_10001898 3300014325 Bacteria 17679
37 Ga0163163_10021920 3300014325 Bacteria 6037
38 Ga0157379_10002014 3300014968 Bacteria 16828
39 Ga0207425_1000001 3300025245 Bacteria 2525432
40 Ga0207425_1000125 3300025245 Bacteria 72177
41 Ga0209148_1001143 3300025254 Bacteria 15496
42 Ga0209129_1000001 3300025258 Bacteria 1452436
43 Ga0209455_1000026 3300025272 Bacteria 653778
44 Ga0209564_1000027 3300025295 Bacteria 518458
45 Ga0209758_1000020 3300025297 Bacteria 734220
46 Ga0209257_1000066 3300025304 Bacteria 344166
47 Ga0209257_1000740 3300025304 Bacteria 49424
48 Ga0207710_10000368 3300025900 Bacteria 31554
49 Ga0207644_10002485 3300025931 Bacteria 11867
50 Ga0207706_10041570 3300025933 Bacteria 4075
51 Ga0207667_10041740 3300025949 Bacteria 4878
52 Ga0207712_10002940 3300025961 Bacteria 10883
53 Ga0207658_10001988 3300025986 Bacteria 15253
54 Ga0207703_10001091 3300026035 Bacteria 25793
55 Ga0207641_10018918 3300026088 Bacteria 5650
56 Ga0207641_10027457 3300026088 Bacteria 4700
57 Ga0207641_10065715 3300026088 Bacteria 3103
58 Ga0207674_10008323 3300026116 Bacteria 12001
59 Ga0209282_1000001 3300027666 Bacteria 2450367
60 Ga0268266_10016994 3300028379 Bacteria 6215
61 Ga0268264_10003216 3300028381 Bacteria 14147
62 Ga0307515_10021341 3300028794 Bacteria 11492
63 Ga0307513_10057425 3300031456 Bacteria 4145
64 Ga0307408_100000506 3300031548 Bacteria 33835
65 Ga0307408_100000618 3300031548 Bacteria 30213
66 Ga0395899_0004955 3300037312 Bacteria 10360
67 Ga0395899_0018338 3300037312 Bacteria 5320
68 Ga0395899_0029710 3300037312 Bacteria 4111
69 Ga0395899_0031907 3300037312 Bacteria 3958
70 Ga0395900_0000028 3300037418 Bacteria 285042
71 Ga0395900_0003662 3300037418 Bacteria 16525
72 Ga0395900_0014534 3300037418 Bacteria 8033
73 Ga0395900_0015846 3300037418 Bacteria 7681
74 Ga0395900_0031501 3300037418 Bacteria 5449
75 Ga0395898_0035261 3300037466 Bacteria 4977
76 Ga0395898_0035312 3300037466 Bacteria 4973
77 Ga0395898_0036931 3300037466 Bacteria 4849
78 Ga0395905_0001372 3300037471 Bacteria 29590
79 Ga0395905_0011166 3300037471 Bacteria 8684
80 Ga0395905_0012805 3300037471 Bacteria 8064
81 Ga0395905_0016742 3300037471 Bacteria 6966
82 Ga0395905_0030685 3300037471 Bacteria 5062
83 Ga0395901_0000076 3300038443 Bacteria 138169
84 Ga0395901_0000083 3300038443 Bacteria 128816
85 Ga0395901_0014749 3300038443 Bacteria 7943
86 Ga0395901_0042382 3300038443 Bacteria 4718
87 Ga0395901_0043935 3300038443 Bacteria 4634
88 Ga0395901_0063351 3300038443 Bacteria 3848
89 Ga0466972_0001975 3300044658 Bacteria 10029
90 Ga0466972_0009111 3300044658 Bacteria 4984
91 Ga0466965_0002337 3300044683 Bacteria 8018
92 Ga0466966_0008170 3300044684 Bacteria 6936
93 Ga0466966_0018271 3300044684 Bacteria 4625
94 Ga0466966_0024909 3300044684 Bacteria 3913
95 Ga0466961_0014530 3300044693 Bacteria 5059
96 Ga0466964_0002055 3300044706 Bacteria 7078
97 Ga0466971_0000231 3300044719 Bacteria 21285
98 Ga0466971_0014486 3300044719 Bacteria 3470
99 Ga0466957_0022032 3300044842 Bacteria 3756
100 Ga0466959_0000137 3300045049 Bacteria 47657
101 Ga0466958_0000219 3300045836 Bacteria 21608
102 Ga0466967_0006651 3300045976 Bacteria 8219
103 Ga0495617_000983 3300046452 Bacteria 13247
104 Ga0495590_0000003 3300046457 Bacteria 478593
105 Ga0495638_0000198 3300046460 Bacteria 86199
106 Ga0495638_0002391 3300046460 Bacteria 15375
107 Ga0495650_0000577 3300046471 Bacteria 51317
108 Ga0495605_0000381 3300046474 Bacteria 41604
109 Ga0495605_0019382 3300046474 Bacteria 3633
110 Ga0495584_0000855 3300046491 Bacteria 19668
111 Ga0495585_0001637 3300046492 Bacteria 17131
112 Ga0495607_0001652 3300046501 Bacteria 19311
113 Ga0495607_0002093 3300046501 Bacteria 16671
114 Ga0495607_0011997 3300046501 Bacteria 5734
115 Ga0495583_0000253 3300046506 Bacteria 88398
116 Ga0495583_0000265 3300046506 Bacteria 86085
117 Ga0495606_0014521 3300046507 Bacteria 6136
118 Ga0495610_0001501 3300046512 Bacteria 20517
119 Ga0495616_0000283 3300046513 Bacteria 41076
120 Ga0495616_0000572 3300046513 Bacteria 27802
121 Ga0495616_0006255 3300046513 Bacteria 7232
122 Ga0495632_0001308 3300046519 Bacteria 21053
123 Ga0495637_0008573 3300046520 Bacteria 5015
124 Ga0495643_0000106 3300046522 Bacteria 138657
125 Ga0495643_0000340 3300046522 Bacteria 63668
126 Ga0495643_0002506 3300046522 Bacteria 14429
127 Ga0495644_0001661 3300046523 Bacteria 9027
128 Ga0495648_0000087 3300046524 Bacteria 116394
129 Ga0495648_0000238 3300046524 Bacteria 63006
130 Ga0495648_0018010 3300046524 Bacteria 5024
131 Ga0495642_0000186 3300046528 Bacteria 36860
132 Ga0495609_0000001 3300046538 Bacteria 1060094
133 Ga0495597_0000119 3300046542 Bacteria 71150
134 Ga0495597_0000243 3300046542 Bacteria 49541
135 Ga0495622_0000084 3300046557 Bacteria 83759
136 Ga0495633_0000187 3300046558 Bacteria 80958
137 Ga0495633_0000767 3300046558 Bacteria 28845
138 Ga0495656_0001184 3300046615 Bacteria 8485
139 Ga0495668_0000239 3300046616 Bacteria 78426
140 Ga0495625_0000038 3300046660 Bacteria 211808
141 Ga0495625_0007239 3300046660 Bacteria 9712
142 Ga0495625_0017182 3300046660 Bacteria 5666
143 Ga0495661_0000053 3300046665 Bacteria 140234
144 Ga0495661_0001863 3300046665 Bacteria 16850
145 Ga0495588_0000041 3300046674 Bacteria 377896
146 Ga0495588_0000201 3300046674 Bacteria 59959
147 Ga0495671_0015331 3300046692 Bacteria 4109
148 Ga0495649_0000263 3300046694 Bacteria 46744
149 Ga0495649_0003966 3300046694 Bacteria 9767
150 Ga0495589_0000147 3300046794 Bacteria 65369
151 Ga0495589_0013209 3300046794 Bacteria 4261
152 Ga0495660_0000079 3300046810 Bacteria 104002
153 Ga0495660_0003109 3300046810 Bacteria 10351
154 Ga0495660_0007431 3300046810 Bacteria 6432
155 Ga0495636_0000744 3300047318 Bacteria 11980
156 Ga0495672_0000141 3300047320 Bacteria 106630
157 Ga0495672_0000264 3300047320 Bacteria 72738
158 Ga0495672_0010323 3300047320 Bacteria 6669
159 Ga0495683_0001350 3300047323 Bacteria 16355
160 Ga0495687_000019 3300047443 Bacteria 341756
161 Ga0495687_000036 3300047443 Bacteria 255427
162 Ga0495687_000062 3300047443 Bacteria 176135
163 Ga0495687_000477 3300047443 Bacteria 48508
164 Ga0495687_000534 3300047443 Bacteria 45469
165 Ga0495677_0000009 3300047445 Bacteria 170927
166 Ga0495677_0001359 3300047445 Bacteria 9771
167 Ga0495677_0004975 3300047445 Bacteria 5070
168 Ga0495673_0000024 3300047469 Bacteria 521349
169 Ga0495673_0000039 3300047469 Bacteria 301943
170 Ga0495673_0000115 3300047469 Bacteria 154414
171 Ga0495673_0000785 3300047469 Bacteria 29990
172 Ga0495626_0001294 3300048091 Bacteria 20418
173 Ga0495626_0003125 3300048091 Bacteria 10841
174 Ga0496103_0002499 3300048906 Bacteria 11536
175 Ga0496121_0000970 3300048924 Bacteria 51488
176 Ga0496122_0007582 3300048925 Bacteria 12000
177 Ga0496122_0034117 3300048925 Bacteria 4171
178 Ga0496123_0004969 3300048926 Bacteria 13630
179 Ga0496123_0005945 3300048926 Bacteria 12019
180 Ga0496124_0032665 3300048927 Bacteria 4591
181 Ga0496125_0007755 3300048928 Bacteria 11362
182 Ga0495678_000101 3300049459 Bacteria 104596
183 Ga0495678_000484 3300049459 Bacteria 39516
184 Ga0495682_0000208 3300049460 Bacteria 47163
185 Ga0501269_000051 3300049766 Bacteria 36311
186 Ga0501035_0002949 3300049822 Bacteria 16363
187 nmdc:mga07m45_553_c1 3300050496 Bacteria 15900
188 Ga0500588_0003517 3300053146 Bacteria 3317
189 Ga0500622_0002317 3300053156 Bacteria 13915
190 2511120614 2510917020 Bacteria 5657507
191 2587918278 2585428106 Bacteria 5179711
192 2643798952 2643221556 Bacteria 7251154
193 2643925343 2643221583 Bacteria 5218014
194 2644224755 2643221640 Bacteria 5258820
195 2644234310 2643221642 Bacteria 5357871
196 2644250269 2643221645 Bacteria 7207331
197 2644357747 2643221664 Bacteria 7272945
198 2644473717 2643221684 Bacteria 7145183
199 2738741709 2738541280 Bacteria 6630198
200 2738843975 2738541300 Bacteria 6675882
201 2739274463 2738543018 Bacteria 6718814
202 2739343507 2738543030 Bacteria 6719714
203 2792461937 2791355048 Bacteria 5832535
204 2842716903 2842711865 Bacteria 7155354
205 2849562165 2849560528 Bacteria 5393480
206 2851156603 2851153111 Bacteria 5542585
207 2857507393 2857504554 Bacteria 5369913
208 2898330272 2898329390 Bacteria 5168154
209 2904429715 2904424332 Bacteria 7633521
210 8047678300 8047673197 Bacteria 7395230
211 Ga0070665_100015636
212 JGI25152J39213_1000002
213 JGI25150J39212_1000038
214 Ga0006759J45824_1036948
215 rootL2_10038608
216 rootL2_10063534
217 rootH1_10016249
218 Ga0007409J51694_1018550
219 Ga0055529_1000128
220 Ga0055526_1000025
221 Ga0055531_10000564
222 Ga0070671_100002521
223 Ga0070667_100002320
224 Ga0070665_100009841
225 Ga0068857_100002475
226 Ga0068852_100042647
227 Ga0068859_100000838
228 Ga0068864_100024120
229 Ga0068863_100022062
230 Ga0068863_100026640
231 Ga0068858_100001046
232 Ga0068858_100005986
233 Ga0068860_100001530
234 Ga0075370_10000495
235 Ga0097620_100000838
236 Ga0099826_10000001
237 Ga0105244_10000862
238 Ga0105247_10000626
239 Ga0105243_10020928
240 Ga0105241_10019572
241 Ga0105242_10017521
242 Ga0105248_10009479
243 Ga0105237_10009630
244 Ga0105249_10018328
245 Ga0105239_10052246
246 Ga0163163_10001898
247 Ga0163163_10021920
248 Ga0157379_10002014
249 Ga0207425_1000001
250 Ga0207425_1000125
251 Ga0209148_1001143
252 Ga0209129_1000001
253 Ga0209455_1000026
254 Ga0209564_1000027
255 Ga0209758_1000020
256 Ga0209257_1000066
257 Ga0209257_1000740
258 Ga0207710_10000368
259 Ga0207644_10002485
260 Ga0207706_10041570
261 Ga0207667_10041740
262 Ga0207712_10002940
263 Ga0207658_10001988
264 Ga0207703_10001091
265 Ga0207641_10018918
266 Ga0207641_10027457
267 Ga0207641_10065715
268 Ga0207674_10008323
269 Ga0209282_1000001
270 Ga0268266_10016994
271 Ga0268264_10003216
272 Ga0307515_10021341
273 Ga0307513_10057425
274 Ga0307408_100000506
275 Ga0307408_100000618
276 Ga0395899_0004955
277 Ga0395899_0018338
278 Ga0395899_0029710
279 Ga0395899_0031907
280 Ga0395900_0000028
281 Ga0395900_0003662
282 Ga0395900_0014534
283 Ga0395900_0015846
284 Ga0395900_0031501
285 Ga0395898_0035261
286 Ga0395898_0035312
287 Ga0395898_0036931
288 Ga0395905_0001372
289 Ga0395905_0011166
290 Ga0395905_0012805
291 Ga0395905_0016742
292 Ga0395905_0030685
293 Ga0395901_0000076
294 Ga0395901_0000083
295 Ga0395901_0014749
296 Ga0395901_0042382
297 Ga0395901_0043935
298 Ga0395901_0063351
299 Ga0466972_0001975
300 Ga0466972_0009111
301 Ga0466965_0002337
302 Ga0466966_0008170
303 Ga0466966_0018271
304 Ga0466966_0024909
305 Ga0466961_0014530
306 Ga0466964_0002055
307 Ga0466971_0000231
308 Ga0466971_0014486
309 Ga0466957_0022032
310 Ga0466959_0000137
311 Ga0466958_0000219
312 Ga0466967_0006651
313 Ga0495617_000983
314 Ga0495590_0000003
315 Ga0495638_0000198
316 Ga0495638_0002391
317 Ga0495650_0000577
318 Ga0495605_0000381
319 Ga0495605_0019382
320 Ga0495584_0000855
321 Ga0495585_0001637
322 Ga0495607_0001652
323 Ga0495607_0002093
324 Ga0495607_0011997
325 Ga0495583_0000253
326 Ga0495583_0000265
327 Ga0495606_0014521
328 Ga0495610_0001501
329 Ga0495616_0000283
330 Ga0495616_0000572
331 Ga0495616_0006255
332 Ga0495632_0001308
333 Ga0495637_0008573
334 Ga0495643_0000106
335 Ga0495643_0000340
336 Ga0495643_0002506
337 Ga0495644_0001661
338 Ga0495648_0000087
339 Ga0495648_0000238
340 Ga0495648_0018010
341 Ga0495642_0000186
342 Ga0495609_0000001
343 Ga0495597_0000119
344 Ga0495597_0000243
345 Ga0495622_0000084
346 Ga0495633_0000187
347 Ga0495633_0000767
348 Ga0495656_0001184
349 Ga0495668_0000239
350 Ga0495625_0000038
351 Ga0495625_0007239
352 Ga0495625_0017182
353 Ga0495661_0000053
354 Ga0495661_0001863
355 Ga0495588_0000041
356 Ga0495588_0000201
357 Ga0495671_0015331
358 Ga0495649_0000263
359 Ga0495649_0003966
360 Ga0495589_0000147
361 Ga0495589_0013209
362 Ga0495660_0000079
363 Ga0495660_0003109
364 Ga0495660_0007431
365 Ga0495636_0000744
366 Ga0495672_0000141
367 Ga0495672_0000264
368 Ga0495672_0010323
369 Ga0495683_0001350
370 Ga0495687_000019
371 Ga0495687_000036
372 Ga0495687_000062
373 Ga0495687_000477
374 Ga0495687_000534
375 Ga0495677_0000009
376 Ga0495677_0001359
377 Ga0495677_0004975
378 Ga0495673_0000024
379 Ga0495673_0000039
380 Ga0495673_0000115
381 Ga0495673_0000785
382 Ga0495626_0001294
383 Ga0495626_0003125
384 Ga0496103_0002499
385 Ga0496121_0000970
386 Ga0496122_0007582
387 Ga0496122_0034117
388 Ga0496123_0004969
389 Ga0496123_0005945
390 Ga0496124_0032665
391 Ga0496125_0007755
392 Ga0495678_000101
393 Ga0495678_000484
394 Ga0495682_0000208
395 Ga0501269_000051
396 Ga0501035_0002949
397 nmdc:mga07m45_553_c1
398 Ga0500588_0003517
399 Ga0500622_0002317
400 2511120614
401 2587918278
402 2643798952
403 2643925343
404 2644224755
405 2644234310
406 2644250269
407 2644357747
408 2644473717
409 2738741709
410 2738843975
411 2739274463
412 2739343507
413 2792461937
414 2842716903
415 2849562165
416 2851156603
417 2857507393
418 2898330272
419 2904429715
420 8047678300

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

179

288

0.91

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

578

1051

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nqe-assembly1.cif.gz_A outer membrane cobalamin transporter (btub) from e. coli 0.7265 174 986
3efm-assembly1.cif.gz_A structure of the alcaligin outer membrane recepteur faua from bordetella pertussis 0.7151 179 986
1kmp-assembly1.cif.gz_A crystal structure of the outer membrane transporter feca complexed with ferric citrate 0.7014 176 986
1nqg-assembly1.cif.gz_A outer membrane cobalamin transporter (btub) from e. coli, with bound calcium 0.7002 174 986
1xkw-assembly1.cif.gz_A pyochelin outer membrane receptor fpta from pseudomonas aeruginosa 0.6992 179 986
ID Description Score Start End Superfamily
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7364 174 986 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7315 174 986 2.40.170.20
3efmA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7146 179 986 2.40.170.20
3efmA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7072 179 986 2.40.170.20
1xkwA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7044 179 986 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A4Q2XR53-F1-model_v4 deleted 0.8473 402 986
AF-A0A1C4FU79-F1-model_v4 TonB-dependent receptor 0.8272 175 986 GO:0009279
AF-A0A2R7QN57-F1-model_v4 TonB-dependent receptor 0.8089 672 986 GO:0009279
AF-A0A162B6U6-F1-model_v4 TonB-dependent receptor 0.8073 176 987 GO:0009279
AF-A0A4Q2XR53-F1-model_v4 deleted 0.8053 402 986

Map