F320287

General Info

Members Datasets Scaffolds Average Seq Length
210 171 208 168

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_11226716|Ga0105245_112267161
Length 183
Sequence MSDDANEKDRREQYNGLYRGTVTLNVDPMQRGRLLLAIPDALSFLPSTWAEPCVPLAGPTGPPMGVYMVPPIGAGVWVQFEHGDVNKPVWIGCRWGLPSDIPLLAKAGNPADPNIVIQSLLQHTLMISDMPPSPVTGGIILRSTTGAMIVVNDSGIYISNGKGATITMIGPTVAINTTALTVT

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
3 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
12 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
23 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
24 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
28 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
32 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
33 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
34 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
35 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
36 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
37 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
38 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
39 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
40 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
41 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
42 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
43 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
44 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
45 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
46 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
47 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
58 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
59 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
60 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
61 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
63 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
64 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
69 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
83 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
85 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
86 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
88 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
89 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
117 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
118 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
119 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
120 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
124 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
125 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
131 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
132 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.05
Metatranscriptomes 0
Isolates 0.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.62
Nodule 0
Rhizoplane 2.86
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 6.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1487243 2162886007 Unclassified 3474
2 CNAas_1001756 3300000532 Bacteria 1711
3 JGI25157J39369_1002677 3300002741 Bacteria 4156
4 JGI25164J39214_1000116 3300002772 Bacteria 76944
5 JGI25406J46586_10000010 3300003203 Bacteria 109792
6 JGI25165J46597_1000382 3300003214 Bacteria 48091
7 rootH1_10106714 3300003316 Bacteria 5602
8 rootL2_10000408 3300003322 Bacteria 27969
9 Ga0055535_1000637 3300003761 Bacteria 27979
10 Ga0055535_1000853 3300003761 Bacteria 21692
11 Ga0055542_1001130 3300003762 Bacteria 15854
12 Ga0055529_1000366 3300003763 Bacteria 49046
13 Ga0065714_10015493 3300005288 Bacteria 1720
14 Ga0065704_10237536 3300005289 Bacteria 1025
15 Ga0065704_10273339 3300005289 Unclassified 938
16 Ga0065715_10105270 3300005293 Unclassified 2905
17 Ga0065715_10126593 3300005293 Bacteria 2105
18 Ga0065707_10002581 3300005295 Bacteria 5511
19 Ga0070676_10402449 3300005328 Bacteria 953
20 Ga0070683_100013989 3300005329 Bacteria 7009
21 Ga0070683_100023087 3300005329 Bacteria 5563
22 Ga0070683_100253855 3300005329 Bacteria 1672
23 Ga0068869_100070452 3300005334 Bacteria 2587
24 Ga0068869_100113390 3300005334 Unclassified 2065
25 Ga0070680_100000985 3300005336 Bacteria 20205
26 Ga0068868_100512258 3300005338 Bacteria 1052
27 Ga0070687_100078320 3300005343 Bacteria 1796
28 Ga0070661_100203062 3300005344 Bacteria 1515
29 Ga0070692_10023635 3300005345 Unclassified 3013
30 Ga0070668_100100238 3300005347 Bacteria 2294
31 Ga0070669_100048363 3300005353 Unclassified 3104
32 Ga0070669_100126233 3300005353 Bacteria 1958
33 Ga0070671_100660858 3300005355 Bacteria 905
34 Ga0070688_100138538 3300005365 Bacteria 1650
35 Ga0070659_101444704 3300005366 Bacteria 612
36 Ga0070667_100168769 3300005367 Bacteria 1931
37 Ga0070703_10000004 3300005406 Bacteria 136572
38 Ga0070713_100009503 3300005436 Bacteria 6966
39 Ga0070710_10028354 3300005437 Bacteria 2994
40 Ga0070705_100000368 3300005440 Bacteria 26424
41 Ga0070705_100032951 3300005440 Bacteria 2884
42 Ga0070705_100188296 3300005440 Bacteria 1404
43 Ga0070705_100372463 3300005440 Bacteria 1048
44 Ga0070694_100506780 3300005444 Unclassified 961
45 Ga0070694_100838402 3300005444 Bacteria 756
46 Ga0070708_101270243 3300005445 Bacteria 688
47 Ga0070662_100554048 3300005457 Bacteria 964
48 Ga0070681_10294969 3300005458 Unclassified 1531
49 Ga0070706_100000054 3300005467 Bacteria 138243
50 Ga0070706_100000207 3300005467 Bacteria 73026
51 Ga0070707_100013888 3300005468 Bacteria 7543
52 Ga0070698_100211259 3300005471 Bacteria 1875
53 Ga0070699_100000008 3300005518 Bacteria 295702
54 Ga0070699_100329380 3300005518 Bacteria 1373
55 Ga0070679_100001233 3300005530 Bacteria 22489
56 Ga0070684_100044780 3300005535 Bacteria 3829
57 Ga0070684_100136389 3300005535 Bacteria 2217
58 Ga0070684_100273452 3300005535 Bacteria 1547
59 Ga0070684_101013545 3300005535 Bacteria 779
60 Ga0070696_100001048 3300005546 Bacteria 17879
61 Ga0070696_100004451 3300005546 Bacteria 9353
62 Ga0070696_100763365 3300005546 Bacteria 793
63 Ga0070693_100005834 3300005547 Bacteria 5949
64 Ga0070704_100837972 3300005549 Bacteria 824
65 Ga0068856_100002786 3300005614 Bacteria 17899
66 Ga0068856_100047909 3300005614 Bacteria 4210
67 Ga0068856_101345200 3300005614 Bacteria 729
68 Ga0068852_100328066 3300005616 Bacteria 1488
69 Ga0068859_100304497 3300005617 Unclassified 1687
70 Ga0068861_100369048 3300005719 Bacteria 1264
71 Ga0068870_10320674 3300005840 Unclassified 984
72 Ga0068863_100086002 3300005841 Bacteria 2979
73 Ga0068863_100319878 3300005841 Bacteria 1507
74 Ga0068863_101159778 3300005841 Bacteria 778
75 Ga0068860_100019039 3300005843 Bacteria 6667
76 Ga0068862_100142863 3300005844 Bacteria 2125
77 Ga0081539_10000003 3300005985 Bacteria 594833
78 Ga0075432_10069263 3300006058 Unclassified 1265
79 Ga0070716_100018531 3300006173 Bacteria 3629
80 Ga0070712_100083329 3300006175 Bacteria 2322
81 Ga0070712_100375467 3300006175 Bacteria 1169
82 Ga0075366_10048969 3300006195 Bacteria 2507
83 Ga0097621_100577810 3300006237 Bacteria 1025
84 Ga0068871_100014643 3300006358 Bacteria 5852
85 Ga0075433_10096227 3300006852 Bacteria 2621
86 Ga0075429_100273174 3300006880 Bacteria 1480
87 Ga0068865_100658280 3300006881 Bacteria 891
88 Ga0097620_100304532 3300006931 Unclassified 1687
89 Ga0111539_10015108 3300009094 Bacteria 9623
90 Ga0105245_10187136 3300009098 Bacteria 1981
91 Ga0105245_11205315 3300009098 Bacteria 805
92 Ga0105245_11226716 3300009098 Bacteria 798
93 Ga0114129_10000925 3300009147 Bacteria 38300
94 Ga0105243_10315121 3300009148 Bacteria 1423
95 Ga0105242_10290220 3300009176 Bacteria 1489
96 Ga0105237_10670379 3300009545 Bacteria 1044
97 Ga0105249_10205902 3300009553 Bacteria 1928
98 Ga0105239_10031131 3300010375 Bacteria 5870
99 Ga0105239_10152561 3300010375 Bacteria 2579
100 Ga0105246_10033873 3300011119 Bacteria 3398
101 Ga0157373_10000982 3300013100 Bacteria 22058
102 Ga0157369_11482333 3300013105 Bacteria 690
103 Ga0157378_10087233 3300013297 Bacteria 2830
104 Ga0157379_10636367 3300014968 Bacteria 998
105 Ga0209672_100129 3300025228 Bacteria 76300
106 Ga0207427_100062 3300025231 Bacteria 178598
107 Ga0209437_100426 3300025233 Bacteria 37186
108 Ga0209258_100088 3300025242 Bacteria 237738
109 Ga0209646_1004438 3300025246 Bacteria 2557
110 Ga0209026_1002744 3300025250 Bacteria 6299
111 Ga0209148_1000024 3300025254 Bacteria 669890
112 Ga0209759_1001219 3300025256 Bacteria 15749
113 Ga0209233_1000023 3300025261 Bacteria 738870
114 Ga0209455_1000025 3300025272 Bacteria 670673
115 Ga0207653_10000047 3300025885 Bacteria 91340
116 Ga0207653_10000052 3300025885 Bacteria 87665
117 Ga0207643_10056201 3300025908 Bacteria 2238
118 Ga0207684_10000272 3300025910 Bacteria 76747
119 Ga0207707_10603406 3300025912 Unclassified 929
120 Ga0207671_10435919 3300025914 Bacteria 1043
121 Ga0207660_10068181 3300025917 Bacteria 2579
122 Ga0207662_10068994 3300025918 Bacteria 2136
123 Ga0207649_10385797 3300025920 Bacteria 1045
124 Ga0207652_10006917 3300025921 Bacteria 9134
125 Ga0207681_10107821 3300025923 Bacteria 2021
126 Ga0207687_10141374 3300025927 Bacteria 1826
127 Ga0207687_10969530 3300025927 Bacteria 729
128 Ga0207690_11099413 3300025932 Bacteria 663
129 Ga0207706_10726903 3300025933 Bacteria 847
130 Ga0207711_10011506 3300025941 Bacteria 7354
131 Ga0207689_10010192 3300025942 Bacteria 8099
132 Ga0207689_10012156 3300025942 Bacteria 7368
133 Ga0207661_10018586 3300025944 Bacteria 5166
134 Ga0207661_10090521 3300025944 Bacteria 2547
135 Ga0207661_10147175 3300025944 Bacteria 2033
136 Ga0207661_10163012 3300025944 Bacteria 1935
137 Ga0207712_10453737 3300025961 Bacteria 1088
138 Ga0207677_10767198 3300026023 Bacteria 861
139 Ga0207702_10015704 3300026078 Bacteria 6270
140 Ga0207641_10295252 3300026088 Bacteria 1529
141 Ga0207675_100008658 3300026118 Bacteria 9567
142 Ga0207683_11036092 3300026121 Bacteria 762
143 Ga0207698_10403005 3300026142 Bacteria 1308
144 Ga0207428_10004015 3300027907 Bacteria 14124
145 Ga0268265_10052000 3300028380 Bacteria 3095
146 Ga0268264_10020981 3300028381 Bacteria 5337
147 Ga0265337_1052298 3300028556 Bacteria 1147
148 Ga0307514_10000557 3300031649 Bacteria 71545
149 Ga0373926_0038320 3300035083 Bacteria 1707
150 Ga0373960_0192002 3300035121 Bacteria 718
151 Ga0373927_0565157 3300035695 Bacteria 752
152 Ga0373925_0354958 3300037068 Unclassified 1191
153 Ga0373925_0418651 3300037068 Bacteria 1094
154 Ga0436365_1863279 3300039437 Bacteria 3621
155 Ga0439436_0035984 3300041404 Bacteria 1429
156 Ga0439431_0013320 3300041997 Bacteria 1896
157 Ga0439445_0016890 3300042004 Bacteria 1799
158 Ga0451577_0000083 3300042876 Bacteria 213999
159 Ga0451577_0119114 3300042876 Bacteria 2365
160 Ga0451577_1181972 3300042876 Unclassified 683
161 Ga0453683_0044741 3300044673 Bacteria 2776
162 Ga0453684_0000533 3300044712 Bacteria 144782
163 Ga0451576_0293614 3300045051 Bacteria 1699
164 Ga0495590_0137053 3300046457 Bacteria 882
165 Ga0495639_0084926 3300046475 Bacteria 1479
166 Ga0495594_0456128 3300046499 Bacteria 727
167 Ga0495630_0018178 3300046517 Bacteria 5162
168 Ga0495630_0168011 3300046517 Unclassified 1670
169 Ga0495634_0468848 3300046642 Unclassified 741
170 Ga0495649_0069020 3300046694 Bacteria 1896
171 Ga0495649_0229161 3300046694 Bacteria 959
172 Ga0495581_0000688 3300047315 Bacteria 17729
173 Ga0495674_0020168 3300047319 Bacteria 6175
174 Ga0495684_0072536 3300047471 Bacteria 2616
175 Ga0495686_0015547 3300047472 Bacteria 5190
176 Ga0496101_0128035 3300048904 Bacteria 1926
177 Ga0496104_0304533 3300048907 Bacteria 1506
178 Ga0496108_0586473 3300048911 Bacteria 972
179 Ga0496112_0022373 3300048915 Bacteria 6025
180 Ga0496114_0113391 3300048917 Bacteria 2324
181 Ga0496115_0006331 3300048918 Bacteria 8666
182 Ga0496118_0299957 3300048921 Bacteria 883
183 Ga0496122_0125945 3300048925 Bacteria 1640
184 Ga0496123_0094927 3300048926 Bacteria 1756
185 Ga0501037_0634060 3300049573 Bacteria 715
186 Ga0501038_0001569 3300049574 Bacteria 21155
187 Ga0501042_0081705 3300049578 Bacteria 2316
188 Ga0501043_0157619 3300049579 Bacteria 1775
189 Ga0501046_0000457 3300049580 Bacteria 40887
190 Ga0501046_0006376 3300049580 Bacteria 10459
191 Ga0501047_0003672 3300049581 Bacteria 14463
192 Ga0501048_0310195 3300049582 Bacteria 1123
193 Ga0501071_0052528 3300049587 Bacteria 2939
194 Ga0501079_0162383 3300049741 Bacteria 1742
195 Ga0501080_1184185 3300049742 Bacteria 657
196 Ga0501081_0079269 3300049743 Bacteria 2297
197 Ga0501035_0000576 3300049822 Bacteria 40518
198 Ga0501044_0000697 3300049823 Bacteria 40518
199 Ga0501045_0206778 3300049824 Bacteria 1462
200 nmdc:mga0k408_49586_c1 3300050493 Bacteria 2430
201 nmdc:mga05p37_63_c1 3300050507 Bacteria 93704
202 nmdc:mga09592_251919_c1 3300050508 Bacteria 1530
203 nmdc:mga08y16_10709_c1 3300050511 Bacteria 9623
204 nmdc:mga0n895_120857_c1 3300050512 Bacteria 2640
205 nmdc:mga0n895_631239_c1 3300050512 Unclassified 1071
206 nmdc:mga0a205_295924_c1 3300050515 Bacteria 1492
207 Ga0500588_0003607 3300053146 Bacteria 3280
208 Ga0501084_0078813 3300054114 Bacteria 2761

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005329 Ga0070683_100023087 Ga0070683_1000230874 124
2 3300005535 Ga0070684_100136389 Ga0070684_1001363893 124
3 3300005329 Ga0070683_100253855 Ga0070683_1002538552 126
4 3300005366 Ga0070659_101444704 Ga0070659_1014447041 126
5 3300005535 Ga0070684_100273452 Ga0070684_1002734522 126
6 3300025932 Ga0207690_11099413 Ga0207690_110994132 126
7 3300025944 Ga0207661_10147175 Ga0207661_101471753 126
8 3300049573 Ga0501037_0634060 Ga0501037_0634060_55_570 127
9 3300005365 Ga0070688_100138538 Ga0070688_1001385382 128
10 3300005841 Ga0068863_100086002 Ga0068863_1000860023 128
11 3300046642 Ga0495634_0468848 Ga0495634_0468848_26_475 128
12 3300005288 Ga0065714_10015493 Ga0065714_100154932 129
13 3300005344 Ga0070661_100203062 Ga0070661_1002030622 129
14 3300005616 Ga0068852_100328066 Ga0068852_1003280662 129
15 3300025920 Ga0207649_10385797 Ga0207649_103857971 129
16 3300025944 Ga0207661_10163012 Ga0207661_101630123 129
17 3300026142 Ga0207698_10403005 Ga0207698_104030053 129
18 3300005289 Ga0065704_10237536 Ga0065704_102375362 130
19 3300005293 Ga0065715_10105270 Ga0065715_101052704 130
20 3300005334 Ga0068869_100113390 Ga0068869_1001133903 130
21 3300005345 Ga0070692_10023635 Ga0070692_100236353 130
22 3300005353 Ga0070669_100048363 Ga0070669_1000483633 130
23 3300005355 Ga0070671_100660858 Ga0070671_1006608582 130
24 3300005406 Ga0070703_10000004 Ga0070703_10000004104 130
25 3300005440 Ga0070705_100000368 Ga0070705_10000036822 130
26 3300005440 Ga0070705_100372463 Ga0070705_1003724631 130
27 3300005444 Ga0070694_100506780 Ga0070694_1005067802 130
28 3300005458 Ga0070681_10294969 Ga0070681_102949693 130
29 3300005467 Ga0070706_100000207 Ga0070706_10000020761 130
30 3300005471 Ga0070698_100211259 Ga0070698_1002112593 130
31 3300005518 Ga0070699_100000008 Ga0070699_10000000873 130
32 3300005546 Ga0070696_100001048 Ga0070696_1000010484 130
33 3300005549 Ga0070704_100837972 Ga0070704_1008379721 130
34 3300005614 Ga0068856_100047909 Ga0068856_1000479095 130
35 3300005617 Ga0068859_100304497 Ga0068859_1003044972 130
36 3300005840 Ga0068870_10320674 Ga0068870_103206741 130
37 3300006852 Ga0075433_10096227 Ga0075433_100962274 130
38 3300006931 Ga0097620_100304532 Ga0097620_1003045322 130
39 3300009098 Ga0105245_10187136 Ga0105245_101871362 130
40 3300011119 Ga0105246_10033873 Ga0105246_100338733 130
41 3300013100 Ga0157373_10000982 Ga0157373_1000098211 130
42 3300025885 Ga0207653_10000052 Ga0207653_100000529 130
43 3300025908 Ga0207643_10056201 Ga0207643_100562013 130
44 3300025910 Ga0207684_10000272 Ga0207684_100002729 130
45 3300025912 Ga0207707_10603406 Ga0207707_106034062 130
46 3300025918 Ga0207662_10068994 Ga0207662_100689943 130
47 3300025927 Ga0207687_10141374 Ga0207687_101413742 130
48 3300026121 Ga0207683_11036092 Ga0207683_110360922 130
49 3300042876 Ga0451577_1181972 Ga0451577_1181972_105_671 130
50 3300050512 nmdc:mga0n895_120857_c1 nmdc:mga0n895_120857_c1_969_1535 130
51 3300050515 nmdc:mga0a205_295924_c1 nmdc:mga0a205_295924_c1_828_1394 130
52 3300003316 rootH1_10106714 rootH1_101067144 131
53 3300003322 rootL2_10000408 rootL2_100004086 131
54 3300005546 Ga0070696_100763365 Ga0070696_1007633651 138
55 3300005841 Ga0068863_100319878 Ga0068863_1003198782 138
56 3300009147 Ga0114129_10000925 Ga0114129_100009255 138
57 3300050507 nmdc:mga05p37_63_c1 nmdc:mga05p37_63_c1_67470_68039 138
58 3300026088 Ga0207641_10295252 Ga0207641_102952522 139
59 3300028556 Ga0265337_1052298 Ga0265337_10522983 140
60 3300005436 Ga0070713_100009503 Ga0070713_1000095034 141
61 3300005437 Ga0070710_10028354 Ga0070710_100283542 141
62 3300006173 Ga0070716_100018531 Ga0070716_1000185314 141
63 3300006175 Ga0070712_100083329 Ga0070712_1000833292 141
64 3300005329 Ga0070683_100013989 Ga0070683_1000139892 142
65 3300006358 Ga0068871_100014643 Ga0068871_1000146436 142
66 3300025944 Ga0207661_10018586 Ga0207661_100185865 142
67 3300006880 Ga0075429_100273174 Ga0075429_1002731742 143
68 3300048904 Ga0496101_0128035 Ga0496101_0128035_1086_1610 143
69 3300048907 Ga0496104_0304533 Ga0496104_0304533_901_1425 143
70 3300048911 Ga0496108_0586473 Ga0496108_0586473_293_817 143
71 3300048915 Ga0496112_0022373 Ga0496112_0022373_3459_3983 143
72 3300048917 Ga0496114_0113391 Ga0496114_0113391_47_571 143
73 3300048918 Ga0496115_0006331 Ga0496115_0006331_7285_7809 143
74 3300049580 Ga0501046_0000457 Ga0501046_0000457_12845_13402 143
75 3300050508 nmdc:mga09592_251919_c1 nmdc:mga09592_251919_c1_758_1324 143
76 3300041404 Ga0439436_0035984 Ga0439436_0035984_563_1099 146
77 3300041997 Ga0439431_0013320 Ga0439431_0013320_834_1370 146
78 3300042004 Ga0439445_0016890 Ga0439445_0016890_376_912 146
79 3300005440 Ga0070705_100032951 Ga0070705_1000329512 148
80 3300049579 Ga0501043_0157619 Ga0501043_0157619_1072_1629 148
81 3300049580 Ga0501046_0006376 Ga0501046_0006376_3639_4196 148
82 3300049581 Ga0501047_0003672 Ga0501047_0003672_6238_6795 148
83 3300049822 Ga0501035_0000576 Ga0501035_0000576_17874_18431 148
84 3300049823 Ga0501044_0000697 Ga0501044_0000697_17874_18431 148
85 3300042876 Ga0451577_0000083 Ga0451577_0000083_68_625 151
86 3300044712 Ga0453684_0000533 Ga0453684_0000533_97778_98335 151
87 iso_pu_bacteria 2738541276 2738713847 152
88 iso_pu_bacteria 8006926726 8006927020 152
89 3300046517 Ga0495630_0168011 Ga0495630_0168011_1112_1636 153
90 3300005328 Ga0070676_10402449 Ga0070676_104024492 154
91 3300005546 Ga0070696_100004451 Ga0070696_1000044512 154
92 3300005547 Ga0070693_100005834 Ga0070693_1000058346 154
93 3300006175 Ga0070712_100375467 Ga0070712_1003754672 154
94 3300013297 Ga0157378_10087233 Ga0157378_100872333 154
95 3300025941 Ga0207711_10011506 Ga0207711_100115065 154
96 3300042876 Ga0451577_0119114 Ga0451577_0119114_33_560 154
97 3300044673 Ga0453683_0044741 Ga0453683_0044741_1669_2199 154
98 3300045051 Ga0451576_0293614 Ga0451576_0293614_382_912 154
99 3300049578 Ga0501042_0081705 Ga0501042_0081705_844_1368 154
100 3300049582 Ga0501048_0310195 Ga0501048_0310195_56_580 154
101 3300049587 Ga0501071_0052528 Ga0501071_0052528_791_1315 154
102 3300049741 Ga0501079_0162383 Ga0501079_0162383_186_710 154
103 3300049742 Ga0501080_1184185 Ga0501080_1184185_110_634 154
104 3300049743 Ga0501081_0079269 Ga0501081_0079269_815_1339 154
105 3300049824 Ga0501045_0206778 Ga0501045_0206778_811_1335 154
106 3300054114 Ga0501084_0078813 Ga0501084_0078813_1148_1672 154
107 3300000532 CNAas_1001756 CNAas_10017562 155
108 3300002741 JGI25157J39369_1002677 JGI25157J39369_10026771 155
109 3300002772 JGI25164J39214_1000116 JGI25164J39214_100011639 155
110 3300003203 JGI25406J46586_10000010 JGI25406J46586_1000001036 155
111 3300003214 JGI25165J46597_1000382 JGI25165J46597_100038220 155
112 3300003761 Ga0055535_1000637 Ga0055535_100063721 155
113 3300003761 Ga0055535_1000853 Ga0055535_10008536 155
114 3300003762 Ga0055542_1001130 Ga0055542_10011305 155
115 3300003763 Ga0055529_1000366 Ga0055529_100036622 155
116 3300005293 Ga0065715_10126593 Ga0065715_101265932 155
117 3300005334 Ga0068869_100070452 Ga0068869_1000704524 155
118 3300005336 Ga0070680_100000985 Ga0070680_1000009856 155
119 3300005338 Ga0068868_100512258 Ga0068868_1005122582 155
120 3300005343 Ga0070687_100078320 Ga0070687_1000783202 155
121 3300005347 Ga0070668_100100238 Ga0070668_1001002384 155
122 3300005353 Ga0070669_100126233 Ga0070669_1001262333 155
123 3300005367 Ga0070667_100168769 Ga0070667_1001687692 155
124 3300005440 Ga0070705_100188296 Ga0070705_1001882962 155
125 3300005444 Ga0070694_100838402 Ga0070694_1008384022 155
126 3300005445 Ga0070708_101270243 Ga0070708_1012702431 155
127 3300005457 Ga0070662_100554048 Ga0070662_1005540482 155
128 3300005518 Ga0070699_100329380 Ga0070699_1003293802 155
129 3300005530 Ga0070679_100001233 Ga0070679_1000012336 155
130 3300005535 Ga0070684_100044780 Ga0070684_1000447805 155
131 3300005535 Ga0070684_101013545 Ga0070684_1010135451 155
132 3300005614 Ga0068856_100002786 Ga0068856_10000278612 155
133 3300005614 Ga0068856_101345200 Ga0068856_1013452002 155
134 3300005719 Ga0068861_100369048 Ga0068861_1003690481 155
135 3300005843 Ga0068860_100019039 Ga0068860_1000190398 155
136 3300005844 Ga0068862_100142863 Ga0068862_1001428632 155
137 3300005985 Ga0081539_10000003 Ga0081539_10000003109 155
138 3300006195 Ga0075366_10048969 Ga0075366_100489694 155
139 3300006237 Ga0097621_100577810 Ga0097621_1005778102 155
140 3300006881 Ga0068865_100658280 Ga0068865_1006582802 155
141 3300009098 Ga0105245_11205315 Ga0105245_112053152 155
142 3300009098 Ga0105245_11226716 Ga0105245_112267161 155
143 3300009148 Ga0105243_10315121 Ga0105243_103151212 155
144 3300009176 Ga0105242_10290220 Ga0105242_102902202 155
145 3300009545 Ga0105237_10670379 Ga0105237_106703792 155
146 3300009553 Ga0105249_10205902 Ga0105249_102059022 155
147 3300010375 Ga0105239_10031131 Ga0105239_100311314 155
148 3300010375 Ga0105239_10152561 Ga0105239_101525612 155
149 3300013105 Ga0157369_11482333 Ga0157369_114823332 155
150 3300014968 Ga0157379_10636367 Ga0157379_106363673 155
151 3300025228 Ga0209672_100129 Ga0209672_10012941 155
152 3300025231 Ga0207427_100062 Ga0207427_10006244 155
153 3300025233 Ga0209437_100426 Ga0209437_10042624 155
154 3300025242 Ga0209258_100088 Ga0209258_10008821 155
155 3300025246 Ga0209646_1004438 Ga0209646_10044383 155
156 3300025250 Ga0209026_1002744 Ga0209026_10027445 155
157 3300025254 Ga0209148_1000024 Ga0209148_1000024129 155
158 3300025256 Ga0209759_1001219 Ga0209759_10012193 155
159 3300025261 Ga0209233_1000023 Ga0209233_100002374 155
160 3300025272 Ga0209455_1000025 Ga0209455_1000025129 155
161 3300025885 Ga0207653_10000047 Ga0207653_1000004720 155
162 3300025914 Ga0207671_10435919 Ga0207671_104359192 155
163 3300025917 Ga0207660_10068181 Ga0207660_100681814 155
164 3300025921 Ga0207652_10006917 Ga0207652_100069176 155
165 3300025923 Ga0207681_10107821 Ga0207681_101078212 155
166 3300025927 Ga0207687_10969530 Ga0207687_109695302 155
167 3300025933 Ga0207706_10726903 Ga0207706_107269031 155
168 3300025942 Ga0207689_10010192 Ga0207689_100101926 155
169 3300025942 Ga0207689_10012156 Ga0207689_100121562 155
170 3300025944 Ga0207661_10090521 Ga0207661_100905214 155
171 3300025961 Ga0207712_10453737 Ga0207712_104537372 155
172 3300026023 Ga0207677_10767198 Ga0207677_107671982 155
173 3300026078 Ga0207702_10015704 Ga0207702_100157043 155
174 3300026118 Ga0207675_100008658 Ga0207675_1000086586 155
175 3300028380 Ga0268265_10052000 Ga0268265_100520003 155
176 3300028381 Ga0268264_10020981 Ga0268264_100209812 155
177 3300031649 Ga0307514_10000557 Ga0307514_1000055740 155
178 3300035083 Ga0373926_0038320 Ga0373926_0038320_782_1330 155
179 3300035121 Ga0373960_0192002 Ga0373960_0192002_24_566 155
180 3300035695 Ga0373927_0565157 Ga0373927_0565157_70_615 155
181 3300037068 Ga0373925_0354958 Ga0373925_0354958_555_1103 155
182 3300037068 Ga0373925_0418651 Ga0373925_0418651_96_644 155
183 3300039437 Ga0436365_1863279 Ga0436365_1863279_2951_3499 155
184 3300046457 Ga0495590_0137053 Ga0495590_0137053_116_664 155
185 3300046475 Ga0495639_0084926 Ga0495639_0084926_61_609 155
186 3300046499 Ga0495594_0456128 Ga0495594_0456128_147_695 155
187 3300046517 Ga0495630_0018178 Ga0495630_0018178_1184_1732 155
188 3300046694 Ga0495649_0069020 Ga0495649_0069020_1136_1678 155
189 3300046694 Ga0495649_0229161 Ga0495649_0229161_337_885 155
190 3300047315 Ga0495581_0000688 Ga0495581_0000688_662_1210 155
191 3300047319 Ga0495674_0020168 Ga0495674_0020168_2728_3276 155
192 3300047471 Ga0495684_0072536 Ga0495684_0072536_981_1529 155
193 3300047472 Ga0495686_0015547 Ga0495686_0015547_2079_2627 155
194 3300048921 Ga0496118_0299957 Ga0496118_0299957_291_839 155
195 3300048925 Ga0496122_0125945 Ga0496122_0125945_414_962 155
196 3300048926 Ga0496123_0094927 Ga0496123_0094927_633_1181 155
197 3300049574 Ga0501038_0001569 Ga0501038_0001569_1319_1849 155
198 3300050493 nmdc:mga0k408_49586_c1 nmdc:mga0k408_49586_c1_79_609 155
199 3300053146 Ga0500588_0003607 Ga0500588_0003607_850_1383 155
200 2162886007 SwRhRL2b_contig_1487243 SwRhRL2b_0069.00001210 156
201 3300005289 Ga0065704_10273339 Ga0065704_102733392 156
202 3300005295 Ga0065707_10002581 Ga0065707_100025815 156
203 3300005467 Ga0070706_100000054 Ga0070706_10000005470 156
204 3300005468 Ga0070707_100013888 Ga0070707_1000138887 156
205 3300005841 Ga0068863_101159778 Ga0068863_1011597781 156
206 3300006058 Ga0075432_10069263 Ga0075432_100692632 156
207 3300009094 Ga0111539_10015108 Ga0111539_100151085 156
208 3300027907 Ga0207428_10004015 Ga0207428_100040156 156
209 3300050511 nmdc:mga08y16_10709_c1 nmdc:mga08y16_10709_c1_3836_4369 156
210 3300050512 nmdc:mga0n895_631239_c1 nmdc:mga0n895_631239_c1_370_903 156

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04717

Phage_base_V

Type VI secretion system/phage-baseplate injector OB domain

18

95

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z6b-assembly1.cif.gz_A crystal structure analysis of (gp27-gp5)3 conjugated with fe(iii) protoporphyrin 0.7703 9 87
4bts-assembly1.cif.gz_C0 the crystal structure of the eukaryotic 40s ribosomal subunit in complex with eif1 and eif1a 0.7595 6 88
6j0m-assembly1.cif.gz_C cryo-em structure of an extracellular contractile injection system, pvc baseplate in extended state (reconstructed with c3 symmetry) 0.753 6 156
8gra-assembly1.cif.gz_G structure of type vi secretion system cargo delivery vehicle hcp-vgrg-paar 0.7455 3 156
1k28-assembly1.cif.gz_A the structure of the bacteriophage t4 cell-puncturing device 0.7414 9 87
ID Description Score Start End Superfamily
3pqhB01 Mainly Beta;Single Sheet;Glycosyl hydrolase fold; 0.7794 107 156 2.20.220.20
2z6bA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding protein domain 0.7703 9 87 2.40.50.260
3qr8A01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Gp5 N-terminal domain 0.7546 11 89 2.40.50.230
4uhvB04 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Gp5 N-terminal domain 0.74 1 90 2.40.50.230
3pqiA02 Special;Other non-globular;Chondroitinase Ac; Chain A, domain 3; 0.721 87 156 6.20.150.20
ID Description Score Start End GO Terms
AF-A0A7W0YYG3-F1-model_v4 Baseplate assembly protein 0.9367 1 154
AF-A0A2W4L798-F1-model_v4 Baseplate assembly protein 0.9345 1 95
AF-A0A7W0YYG3-F1-model_v4 Baseplate assembly protein 0.9245 1 154
AF-A0A5C7NBX9-F1-model_v4 deleted 0.9206 2 155
AF-A0A321LET6-F1-model_v4 Baseplate assembly protein 0.9117 1 147

Feature Viewer

pLDDT pTM Quality
87.03 0.74 High
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Predicted Structure (AlphaFold2)

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