F320360

General Info

Members Datasets Scaffolds Average Seq Length
210 121 423 914

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10003688|Ga0157372_100036887
Length 957
Sequence MMALLNNRCAGNARFKKVAHFRQTANVCPSDKMPPASFKGWLLACLLLTGILVRAQEPAGKPVTIHLTQTRYAGFLKELEKQSGFRIYYDTADLDTTRIDINVDQAPLTRVLDQAFSGTGMSYSIDRYRHVFVAKGEAIRTDLPADYFERHSDKDAVAGGDSVRDYLAEAGTPQVATLENKLYVIGDKGSPTPNRVANVAGYARDAKTGEPIVGASIYVENPRIGVASDQYGYFSISLPKGRHILNIQSIGMRDTRRLLMVYGDGKLNIDLQTQIITLKKVIVSAEKASNVRRTEMGVQKLDIKTIKQVPVVFGEADVLRVITTLPGVKTVGEASTGLNVRGGSADQNLILFNDATIYNTAHFFGMFSAFNPEVVKDVELYKSSIPAKFGGRLSSVVDISSREGNKKDFAGSAGIGLLTSRLNLEGPLVKDKTSFIIGGRTTYANWLLNALPDQYKHSRASFYDANLNISHQMGKKDNLYLTGYISQDHFNLNNDTTYGYGNRNIGLKWKHIYNNRLFHLISTGYDRYQYSIWSQDNPVNAYKLGFDINQLYFRTHFNYFVSSSHTLEFGVSTLKYTLHPGEYTPRGKGSLVQGDTLAKEQALESGAYLSDRYTISNSISLEAGVRYSLYNYLGPATVNTYAPGQPITLDNQTGSVSYPSGKFIKTYGGPEFRLSTRVVLTDNMSIKAGYNTQRQYIHMLSNTTAMAPTDIWKLSDPNIRPQYGDQVSLGLYRNFKNNTIETSLEVYYKHIKDYLDYKSGAMLVMNHHIETDVLETKGKAYGVELLIKKLTGKFNGWLSYTYSRILLRQDDPNAGELVNGGQFYPANYDKPHDVTLVSNYRITHRVSWSFNATYSTGRPITLPIGVFQYAGSLRTLYADRNAYRIPDYFRADISLNVLGNHKVYQKFHNSWTFGVYNLTGRHNPYSVYYTSENGAVNGYKLSIFGSAIPYVNYNIAF

Samples

Sample ID Description Type Environment
1 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
94 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
101 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
102 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
105 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
110 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
111 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
112 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
113 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
116 2738541278 Niastella sp. CF465 Isolate Unclassified
117 2738543023 Pedobacter sp. OK628 Isolate Unclassified
118 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
119 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
120 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
121 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.67
Metatranscriptomes 0
Isolates 3.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.43
Nodule 0
Rhizoplane 0.48
Rhizosphere 88.57
Stem 0
Stem Tuber 0
Unclassified 2.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157372_10003688 3300013307 Bacteria 16455
2 JGI24737J22298_10000044 3300001990 Bacteria 35793
3 JGI24735J21928_10000005 3300002067 Bacteria 356755
4 rootH1_10004416 3300003316 Bacteria 3807
5 rootH1_10004416 3300003323 Bacteria 4902
6 rootH1_10184069 3300003316 Bacteria 4017
7 rootH1_10184069 3300003323 Bacteria 2243
8 rootH2_10000355 3300003320 Bacteria 55375
9 rootH2_10001886 3300003320 Bacteria 115156
10 rootH2_10002197 3300003320 Bacteria 14946
11 rootH2_10035550 3300003320 Bacteria 5766
12 rootL2_10000249 3300003322 Bacteria 16642
13 rootL2_10001589 3300003322 Bacteria 6725
14 rootH1_10012052 3300003316 Bacteria 7951
15 rootH1_10012052 3300003323 Bacteria 55556
16 rootH1_10016264 3300003323 Bacteria 11614
17 rootH1_10024956 3300003323 Bacteria 26839
18 Ga0070658_10001820 3300005327 Bacteria 17939
19 Ga0070658_10006334 3300005327 Bacteria 9590
20 Ga0070676_10000272 3300005328 Bacteria 22766
21 Ga0070666_10000247 3300005335 Bacteria 36276
22 Ga0070666_10001259 3300005335 Bacteria 15315
23 Ga0070680_100000819 3300005336 Bacteria 21946
24 Ga0068868_100000779 3300005338 Bacteria 21565
25 Ga0070691_10001460 3300005341 Bacteria 10130
26 Ga0070668_100000407 3300005347 Bacteria 28520
27 Ga0070673_100001651 3300005364 Bacteria 13227
28 Ga0070667_100002037 3300005367 Bacteria 17914
29 Ga0070662_100011710 3300005457 Bacteria 5789
30 Ga0070681_10001439 3300005458 Bacteria 20958
31 Ga0068867_100002845 3300005459 Bacteria 12167
32 Ga0070679_100001817 3300005530 Bacteria 19247
33 Ga0068853_100004370 3300005539 Bacteria 10936
34 Ga0068853_100016288 3300005539 Bacteria 6116
35 Ga0070672_100001007 3300005543 Bacteria 17083
36 Ga0070665_100000066 3300005548 Bacteria 212791
37 Ga0070665_100005599 3300005548 Bacteria 12915
38 Ga0068855_100000231 3300005563 Bacteria 71276
39 Ga0068855_100000284 3300005563 Bacteria 62592
40 Ga0068855_100013616 3300005563 Bacteria 9808
41 Ga0068855_100034798 3300005563 Bacteria 6004
42 Ga0068855_100038277 3300005563 Bacteria 5699
43 Ga0068857_100000234 3300005577 Bacteria 37184
44 Ga0068857_100007523 3300005577 Bacteria 9373
45 Ga0068856_100049195 3300005614 Bacteria 4155
46 Ga0068856_100060693 3300005614 Bacteria 3736
47 Ga0068852_100000661 3300005616 Bacteria 22523
48 Ga0068852_100006118 3300005616 Bacteria 8678
49 Ga0068859_100000338 3300005617 Bacteria 46830
50 Ga0068864_100001705 3300005618 Bacteria 18058
51 Ga0068864_100002408 3300005618 Bacteria 15449
52 Ga0068866_10003651 3300005718 Bacteria 6301
53 Ga0068851_10000791 3300005834 Bacteria 13629
54 Ga0068863_100001444 3300005841 Bacteria 23583
55 Ga0068863_100002544 3300005841 Bacteria 18095
56 Ga0068858_100000891 3300005842 Bacteria 30978
57 Ga0068860_100000041 3300005843 Bacteria 227790
58 Ga0068860_100001176 3300005843 Bacteria 28644
59 Ga0068860_100001667 3300005843 Bacteria 23752
60 Ga0068860_100002303 3300005843 Bacteria 20070
61 Ga0068860_100008100 3300005843 Bacteria 10466
62 Ga0081540_1005738 3300005983 Bacteria 9201
63 Ga0081539_10000418 3300005985 Bacteria 90493
64 Ga0068871_100004356 3300006358 Bacteria 9839
65 Ga0068865_100006237 3300006881 Bacteria 7263
66 Ga0068865_100018699 3300006881 Unclassified 4475
67 Ga0097620_100000338 3300006931 Bacteria 46830
68 Ga0105240_10000846 3300009093 Bacteria 55115
69 Ga0105240_10001547 3300009093 Bacteria 39045
70 Ga0105240_10004596 3300009093 Bacteria 20919
71 Ga0105240_10004962 3300009093 Bacteria 20004
72 Ga0105240_10042323 3300009093 Bacteria 5805
73 Ga0105240_10044750 3300009093 Bacteria 5621
74 Ga0105245_10009876 3300009098 Bacteria 8311
75 Ga0105241_10000777 3300009174 Bacteria 24263
76 Ga0105241_10006659 3300009174 Bacteria 8501
77 Ga0105241_10013362 3300009174 Bacteria 6019
78 Ga0105242_10009220 3300009176 Bacteria 7572
79 Ga0105237_10002278 3300009545 Bacteria 23884
80 Ga0105237_10003018 3300009545 Bacteria 20308
81 Ga0105237_10005485 3300009545 Bacteria 14299
82 Ga0105237_10010186 3300009545 Bacteria 10017
83 Ga0105237_10021668 3300009545 Bacteria 6606
84 Ga0105237_10033878 3300009545 Bacteria 5174
85 Ga0105238_10031989 3300009551 Bacteria 5354
86 Ga0105249_10001645 3300009553 Bacteria 19588
87 Ga0105249_10045214 3300009553 Bacteria 4004
88 Ga0105239_10000126 3300010375 Bacteria 107921
89 Ga0105239_10000128 3300010375 Bacteria 107095
90 Ga0105239_10000343 3300010375 Bacteria 67956
91 Ga0105239_10000596 3300010375 Bacteria 51547
92 Ga0105239_10000779 3300010375 Bacteria 45211
93 Ga0105239_10003525 3300010375 Bacteria 19164
94 Ga0105239_10017046 3300010375 Bacteria 8030
95 Ga0105239_10025624 3300010375 Bacteria 6494
96 Ga0105239_10031323 3300010375 Bacteria 5850
97 Ga0157370_10002183 3300013104 Bacteria 23875
98 Ga0157369_10026930 3300013105 Bacteria 6376
99 Ga0157374_10000001 3300013296 Bacteria 1077351
100 Ga0157374_10000002 3300013296 Bacteria 1054226
101 Ga0157374_10002032 3300013296 Bacteria 16991
102 Ga0163162_10000275 3300013306 Bacteria 46947
103 Ga0163162_10000404 3300013306 Bacteria 39585
104 Ga0163162_10001121 3300013306 Bacteria 24914
105 Ga0163162_10006415 3300013306 Bacteria 11392
106 Ga0163162_10026751 3300013306 Bacteria 5704
107 Ga0163162_10028641 3300013306 Bacteria 5513
108 Ga0163162_10056351 3300013306 Bacteria 3958
109 Ga0157372_10000329 3300013307 Bacteria 51970
110 Ga0157372_10000406 3300013307 Bacteria 47333
111 Ga0157372_10004248 3300013307 Bacteria 15317
112 Ga0157372_10006312 3300013307 Bacteria 12607
113 Ga0157372_10014134 3300013307 Bacteria 8529
114 Ga0157372_10064524 3300013307 Bacteria 4108
115 Ga0157375_10000295 3300013308 Bacteria 45219
116 Ga0163163_10001212 3300014325 Bacteria 21813
117 Ga0157379_10001715 3300014968 Bacteria 18145
118 Ga0157379_10005085 3300014968 Bacteria 11278
119 Ga0157376_10001094 3300014969 Bacteria 17772
120 Ga0157376_10001183 3300014969 Bacteria 17203
121 Ga0157376_10003022 3300014969 Bacteria 11540
122 Ga0213876_10002769 3300021384 Bacteria 10215
123 Ga0207426_1000089 3300025302 Bacteria 281224
124 Ga0207656_10002275 3300025321 Bacteria 6436
125 Ga0207680_10000031 3300025903 Bacteria 77871
126 Ga0207680_10003816 3300025903 Bacteria 7095
127 Ga0207647_10012555 3300025904 Bacteria 5892
128 Ga0207647_10014386 3300025904 Bacteria 5455
129 Ga0207647_10019229 3300025904 Unclassified 4597
130 Ga0207645_10002857 3300025907 Bacteria 13388
131 Ga0207705_10004320 3300025909 Bacteria 10751
132 Ga0207654_10000979 3300025911 Bacteria 15682
133 Ga0207654_10017165 3300025911 Unclassified 3781
134 Ga0207707_10000785 3300025912 Bacteria 31123
135 Ga0207707_10081482 3300025912 Bacteria 2825
136 Ga0207695_10000073 3300025913 Bacteria 312565
137 Ga0207695_10000687 3300025913 Bacteria 66305
138 Ga0207695_10007884 3300025913 Bacteria 13438
139 Ga0207695_10010857 3300025913 Bacteria 11092
140 Ga0207695_10031628 3300025913 Bacteria 5800
141 Ga0207695_10045020 3300025913 Unclassified 4689
142 Ga0207671_10000981 3300025914 Bacteria 35291
143 Ga0207671_10006363 3300025914 Bacteria 10529
144 Ga0207652_10001257 3300025921 Bacteria 22555
145 Ga0207706_10027291 3300025933 Bacteria 5106
146 Ga0207686_10027456 3300025934 Unclassified 3334
147 Ga0207704_10010680 3300025938 Unclassified 4488
148 Ga0207691_10000372 3300025940 Bacteria 45068
149 Ga0207667_10000151 3300025949 Bacteria 104054
150 Ga0207667_10001533 3300025949 Bacteria 29042
151 Ga0207667_10007797 3300025949 Bacteria 12796
152 Ga0207667_10031747 3300025949 Bacteria 5699
153 Ga0207651_10000753 3300025960 Bacteria 13898
154 Ga0207712_10026364 3300025961 Bacteria 3871
155 Ga0207668_10000309 3300025972 Bacteria 31969
156 Ga0207658_10001348 3300025986 Bacteria 19218
157 Ga0207658_10012474 3300025986 Bacteria 5807
158 Ga0207677_10003184 3300026023 Bacteria 8663
159 Ga0207639_10001813 3300026041 Bacteria 14365
160 Ga0207641_10001017 3300026088 Bacteria 28513
161 Ga0207648_10000906 3300026089 Bacteria 33383
162 Ga0207648_10008447 3300026089 Bacteria 9971
163 Ga0207676_10002209 3300026095 Bacteria 14041
164 Ga0207676_10009688 3300026095 Bacteria 6849
165 Ga0207674_10000935 3300026116 Bacteria 38035
166 Ga0207698_10009116 3300026142 Bacteria 6305
167 Ga0268266_10000010 3300028379 Bacteria 1030233
168 Ga0268264_10000252 3300028381 Bacteria 99533
169 Ga0268264_10001915 3300028381 Bacteria 18805
170 Ga0268264_10002552 3300028381 Bacteria 15974
171 Ga0268264_10004965 3300028381 Bacteria 11270
172 Ga0268264_10027058 3300028381 Bacteria 4685
173 Ga0307515_10000076 3300028794 Bacteria 228736
174 Ga0307511_10000285 3300030521 Bacteria 53256
175 Ga0265327_10006088 3300031251 Bacteria 9783
176 Ga0307509_10070612 3300031507 Bacteria 3646
177 Ga0307408_100002333 3300031548 Bacteria 13440
178 Ga0307408_100010890 3300031548 Bacteria 6002
179 Ga0307408_100033129 3300031548 Bacteria 3607
180 Ga0316584_0001915 3300036712 Bacteria 12953
181 Ga0436365_1874674 3300039437 Bacteria 58580
182 Ga0439457_001084 3300042014 Bacteria 8226
183 Ga0466972_0000047 3300044658 Bacteria 122901
184 Ga0466957_0000205 3300044842 Bacteria 27570
185 Ga0466959_0014635 3300045049 Bacteria 5707
186 Ga0495650_0000050 3300046471 Bacteria 318894
187 Ga0495585_0000248 3300046492 Bacteria 56018
188 Ga0495606_0000581 3300046507 Bacteria 58129
189 Ga0495616_0000271 3300046513 Bacteria 42005
190 Ga0495648_0005326 3300046524 Bacteria 10725
191 Ga0495611_0000322 3300046648 Bacteria 31982
192 Ga0495625_0000105 3300046660 Bacteria 126078
193 Ga0495649_0000011 3300046694 Bacteria 416695
194 Ga0495687_000035 3300047443 Bacteria 255949
195 Ga0495686_0000039 3300047472 Bacteria 304821
196 Ga0495686_0000061 3300047472 Bacteria 236734
197 Ga0495686_0001920 3300047472 Bacteria 20737
198 Ga0495686_0004769 3300047472 Bacteria 10970
199 Ga0501046_0047815 3300049580 Bacteria 3391
200 Ga0501047_0031195 3300049581 Bacteria 5141
201 Ga0501070_0009727 3300049586 Bacteria 8129
202 Ga0501236_000344 3300049670 Bacteria 5068
203 Ga0501225_0000493 3300049705 Bacteria 12299
204 Ga0500583_0000003 3300053092 Bacteria 229587
205 Ga0500622_0003249 3300053156 Bacteria 11039
206 Ga0501084_0005613 3300054114 Bacteria 10303
207 2599480072 2599185184 Bacteria 6430550
208 2738725812 2738541278 Bacteria 9755573
209 2739302358 2738543023 Bacteria 6767879
210 2911139398 2911138879 Bacteria 5811561
211 2928081180 2928078545 Bacteria 6534839
212 2928150644 2928147474 Bacteria 6512076
213 2932085934 2932082852 Bacteria 6563563
214 Ga0157372_10003688
215 JGI24737J22298_10000044
216 JGI24735J21928_10000005
217 rootH1_10004416
218 rootH1_10184069
219 rootH2_10000355
220 rootH2_10001886
221 rootH2_10002197
222 rootH2_10035550
223 rootL2_10000249
224 rootL2_10001589
225 rootH1_10012052
226 rootH1_10016264
227 rootH1_10024956
228 Ga0070658_10001820
229 Ga0070658_10006334
230 Ga0070676_10000272
231 Ga0070666_10000247
232 Ga0070666_10001259
233 Ga0070680_100000819
234 Ga0068868_100000779
235 Ga0070691_10001460
236 Ga0070668_100000407
237 Ga0070673_100001651
238 Ga0070667_100002037
239 Ga0070662_100011710
240 Ga0070681_10001439
241 Ga0068867_100002845
242 Ga0070679_100001817
243 Ga0068853_100004370
244 Ga0068853_100016288
245 Ga0070672_100001007
246 Ga0070665_100000066
247 Ga0070665_100005599
248 Ga0068855_100000231
249 Ga0068855_100000284
250 Ga0068855_100013616
251 Ga0068855_100034798
252 Ga0068855_100038277
253 Ga0068857_100000234
254 Ga0068857_100007523
255 Ga0068856_100049195
256 Ga0068856_100060693
257 Ga0068852_100000661
258 Ga0068852_100006118
259 Ga0068859_100000338
260 Ga0068864_100001705
261 Ga0068864_100002408
262 Ga0068866_10003651
263 Ga0068851_10000791
264 Ga0068863_100001444
265 Ga0068863_100002544
266 Ga0068858_100000891
267 Ga0068860_100000041
268 Ga0068860_100001176
269 Ga0068860_100001667
270 Ga0068860_100002303
271 Ga0068860_100008100
272 Ga0081540_1005738
273 Ga0081539_10000418
274 Ga0068871_100004356
275 Ga0068865_100006237
276 Ga0068865_100018699
277 Ga0097620_100000338
278 Ga0105240_10000846
279 Ga0105240_10001547
280 Ga0105240_10004596
281 Ga0105240_10004962
282 Ga0105240_10042323
283 Ga0105240_10044750
284 Ga0105245_10009876
285 Ga0105241_10000777
286 Ga0105241_10006659
287 Ga0105241_10013362
288 Ga0105242_10009220
289 Ga0105237_10002278
290 Ga0105237_10003018
291 Ga0105237_10005485
292 Ga0105237_10010186
293 Ga0105237_10021668
294 Ga0105237_10033878
295 Ga0105238_10031989
296 Ga0105249_10001645
297 Ga0105249_10045214
298 Ga0105239_10000126
299 Ga0105239_10000128
300 Ga0105239_10000343
301 Ga0105239_10000596
302 Ga0105239_10000779
303 Ga0105239_10003525
304 Ga0105239_10017046
305 Ga0105239_10025624
306 Ga0105239_10031323
307 Ga0157370_10002183
308 Ga0157369_10026930
309 Ga0157374_10000001
310 Ga0157374_10000002
311 Ga0157374_10002032
312 Ga0163162_10000275
313 Ga0163162_10000404
314 Ga0163162_10001121
315 Ga0163162_10006415
316 Ga0163162_10026751
317 Ga0163162_10028641
318 Ga0163162_10056351
319 Ga0157372_10000329
320 Ga0157372_10000406
321 Ga0157372_10004248
322 Ga0157372_10006312
323 Ga0157372_10014134
324 Ga0157372_10064524
325 Ga0157375_10000295
326 Ga0163163_10001212
327 Ga0157379_10001715
328 Ga0157379_10005085
329 Ga0157376_10001094
330 Ga0157376_10001183
331 Ga0157376_10003022
332 Ga0213876_10002769
333 Ga0207426_1000089
334 Ga0207656_10002275
335 Ga0207680_10000031
336 Ga0207680_10003816
337 Ga0207647_10012555
338 Ga0207647_10014386
339 Ga0207647_10019229
340 Ga0207645_10002857
341 Ga0207705_10004320
342 Ga0207654_10000979
343 Ga0207654_10017165
344 Ga0207707_10000785
345 Ga0207707_10081482
346 Ga0207695_10000073
347 Ga0207695_10000687
348 Ga0207695_10007884
349 Ga0207695_10010857
350 Ga0207695_10031628
351 Ga0207695_10045020
352 Ga0207671_10000981
353 Ga0207671_10006363
354 Ga0207652_10001257
355 Ga0207706_10027291
356 Ga0207686_10027456
357 Ga0207704_10010680
358 Ga0207691_10000372
359 Ga0207667_10000151
360 Ga0207667_10001533
361 Ga0207667_10007797
362 Ga0207667_10031747
363 Ga0207651_10000753
364 Ga0207712_10026364
365 Ga0207668_10000309
366 Ga0207658_10001348
367 Ga0207658_10012474
368 Ga0207677_10003184
369 Ga0207639_10001813
370 Ga0207641_10001017
371 Ga0207648_10000906
372 Ga0207648_10008447
373 Ga0207676_10002209
374 Ga0207676_10009688
375 Ga0207674_10000935
376 Ga0207698_10009116
377 Ga0268266_10000010
378 Ga0268264_10000252
379 Ga0268264_10001915
380 Ga0268264_10002552
381 Ga0268264_10004965
382 Ga0268264_10027058
383 Ga0307515_10000076
384 Ga0307511_10000285
385 Ga0265327_10006088
386 Ga0307509_10070612
387 Ga0307408_100002333
388 Ga0307408_100010890
389 Ga0307408_100033129
390 Ga0316584_0001915
391 Ga0436365_1874674
392 Ga0439457_001084
393 Ga0466972_0000047
394 Ga0466957_0000205
395 Ga0466959_0014635
396 Ga0495650_0000050
397 Ga0495585_0000248
398 Ga0495606_0000581
399 Ga0495616_0000271
400 Ga0495648_0005326
401 Ga0495611_0000322
402 Ga0495625_0000105
403 Ga0495649_0000011
404 Ga0495687_000035
405 Ga0495686_0000039
406 Ga0495686_0000061
407 Ga0495686_0001920
408 Ga0495686_0004769
409 Ga0501046_0047815
410 Ga0501047_0031195
411 Ga0501070_0009727
412 Ga0501236_000344
413 Ga0501225_0000493
414 Ga0500583_0000003
415 Ga0500622_0003249
416 Ga0501084_0005613
417 2599480072
418 2738725812
419 2739302358
420 2911139398
421 2928081180
422 2928150644
423 2932085934

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13715

CarbopepD_reg_2

CarboxypepD_reg-like domain

199

283

0.93

PF07715

Plug

TonB-dependent Receptor Plug Domain

290

397

0.87

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

198

274

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qmu-assembly1.cif.gz_A duck carboxypeptidase d domain ii 0.9205 166 240
2nsm-assembly1.cif.gz_A crystal structure of the human carboxypeptidase n (kininase i) catalytic domain 0.864 166 240
3mn8-assembly4.cif.gz_D structure of drosophila melanogaster carboxypeptidase d isoform 1b short 0.8512 166 240
3mn8-assembly3.cif.gz_C structure of drosophila melanogaster carboxypeptidase d isoform 1b short 0.8491 166 240
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8448 166 240
ID Description Score Start End Superfamily
af_E7FFQ7_717_794_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9146 167 240 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9141 166 240 2.60.40.1120
af_Q9JHW1_1212_1304_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9038 166 240 2.60.40.1120
af_P15087_375_469_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9002 166 240 2.60.40.1120
af_P42787_763_851_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8998 166 243 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A1F3NB72-F1-model_v4 TonB-dependent receptor 0.9579 284 914 GO:0009279
GO:0015344
AF-A0A3D3L3N6-F1-model_v4 Carboxypeptidase-like regulatory domain-containing protein 0.947 161 237
AF-A0A1F3NB72-F1-model_v4 TonB-dependent receptor 0.939 284 914 GO:0009279
GO:0015344
AF-A0A849FKD6-F1-model_v4 TonB-dependent receptor 0.9293 239 914 GO:0009279
GO:0015344
AF-A0A849FKD6-F1-model_v4 TonB-dependent receptor 0.9056 239 914 GO:0009279
GO:0015344

Map