F321014

General Info

Members Datasets Scaffolds Average Seq Length
210 160 420 400

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2885270888|2885279071
Length 451
Sequence NPGTLGDWRSLSEYAHARGNVARLTIAQALAGANSTVFYATGAIVGNTLAPSHALATLPISIFVVGMAASSLPAGAIAQRWGRRTAFMAGTACGGLAGLLACWAVMLGSLWLFCVATFFGGAYAAVVLSFRFAAADCVPLERRPRALSFVMAGGVFAGVIGPQLVTWTMNLWSPYTFAATFLAQAAVGALSALVLQGVRLPKPTVAETAGGRPIGVIVRQPRFVTAVICAVVSYLLMNFLMTAAPLAMRMCGLSQQSSNLGIQWHVIAMYAPGFFTGRLIARFGAQRVVMAGLAFTALSAATGLLGVDVAHFWLTLILLGMGWNFGFVGASALVLECHQPEEKARVQSLNDFIVFGTMAFGSFLSGDLLATYGWNTVLGLSLAPLALAVIALLGAAVASRRAMPAERDQCPESGFNRIKAPLAQLSSNLVEPGHEQTGVVPRTVRTPADHD

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
3 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
19 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
22 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
38 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
40 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
41 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
42 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
43 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
44 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
47 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
48 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
49 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
50 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
51 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
52 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
55 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
56 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
57 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
58 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
59 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
60 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
61 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
62 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
63 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
64 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
65 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
66 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
67 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
68 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
69 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
70 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
71 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
72 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
73 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
74 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
75 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
76 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
77 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
78 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
79 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
80 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
81 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
104 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
105 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
106 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
107 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
108 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
109 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
110 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
111 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
112 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
113 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
114 2516143018 Ensifer sp. BR816 Isolate Nodule
115 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
116 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
117 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
118 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
119 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
120 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
121 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
122 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
123 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
124 2643221594 Achromobacter sp. Root170 Isolate Unclassified
125 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
126 2643221621 Achromobacter sp. Root83 Isolate Unclassified
127 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
128 2643221664 Massilia sp. Root418 Isolate Unclassified
129 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
130 2643221736 Bosea sp. Root483D1 Isolate Unclassified
131 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
132 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
133 2738543004 Pseudomonas sp. GV085 Isolate Unclassified
134 2773857925 Microvirga vignae BR3299 Isolate Unclassified
135 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
136 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
137 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
138 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
139 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
140 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
141 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
142 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
143 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
144 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
145 2858950400 Achromobacter sp. K91 Isolate Unclassified
146 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
147 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
148 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
149 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
150 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
151 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
152 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
153 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
154 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
155 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
156 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
157 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
158 641522639 Methylobacterium sp. 4-46 Isolate Nodule
159 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
160 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 71.9
Metatranscriptomes 0
Isolates 28.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.9
Nodule 12.86
Rhizoplane 3.33
Rhizosphere 63.81
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10072073 3300003323 Bacteria 9846
2 Ga0055529_1000712 3300003763 Bacteria 22159
3 Ga0058692_1003956 3300003856 Bacteria 4477
4 Ga0065714_10069171 3300005288 Bacteria 4357
5 Ga0070661_100003885 3300005344 Bacteria 10286
6 Ga0070661_100016549 3300005344 Bacteria 5216
7 Ga0070714_100017251 3300005435 Bacteria 5847
8 Ga0070713_100015047 3300005436 Bacteria 5764
9 Ga0070681_10001636 3300005458 Bacteria 19981
10 Ga0070679_100026168 3300005530 Bacteria 5728
11 Ga0070684_100013203 3300005535 Bacteria 6651
12 Ga0068853_100009924 3300005539 Bacteria 7687
13 Ga0068853_100016310 3300005539 Bacteria 6112
14 Ga0068855_100029932 3300005563 Bacteria 6511
15 Ga0070664_100005811 3300005564 Bacteria 9951
16 Ga0070664_100200821 3300005564 Bacteria 1779
17 Ga0068857_100099811 3300005577 Bacteria 2604
18 Ga0068856_100010058 3300005614 Bacteria 9191
19 Ga0081455_10012536 3300005937 Bacteria 8458
20 Ga0075364_10077978 3300006051 Bacteria 2187
21 Ga0099824_1010817 3300006942 Bacteria 10573
22 Ga0099823_1000007 3300006944 Bacteria 111486
23 Ga0105238_10052230 3300009551 Bacteria 4109
24 Ga0157373_10002105 3300013100 Bacteria 15069
25 Ga0157370_10073739 3300013104 Bacteria 3220
26 Ga0157370_10100969 3300013104 Bacteria 2702
27 Ga0157369_10075790 3300013105 Bacteria 3606
28 Ga0163162_10004466 3300013306 Bacteria 13477
29 Ga0157372_10078232 3300013307 Bacteria 3737
30 Ga0209455_1000282 3300025272 Bacteria 54881
31 Ga0207695_10035722 3300025913 Bacteria 5383
32 Ga0207649_10022121 3300025920 Bacteria 3671
33 Ga0207694_10028706 3300025924 Bacteria 4242
34 Ga0207700_10046296 3300025928 Bacteria 3216
35 Ga0207664_10020489 3300025929 Bacteria 4903
36 Ga0207679_10009750 3300025945 Bacteria 6161
37 Ga0207667_10014140 3300025949 Bacteria 9109
38 Ga0207639_10051482 3300026041 Bacteria 3132
39 Ga0207702_10053975 3300026078 Bacteria 3404
40 Ga0207674_10103038 3300026116 Bacteria 2833
41 Ga0209389_1000050 3300027296 Bacteria 111494
42 Ga0209389_1000162 3300027296 Bacteria 55061
43 Ga0209371_1000046 3300027312 Bacteria 306549
44 Ga0209589_1000001 3300027357 Bacteria 794224
45 Ga0209489_100001 3300027361 Bacteria 794224
46 Ga0209489_110982 3300027361 Bacteria 9661
47 Ga0209700_100001 3300027363 Bacteria 794224
48 Ga0209700_100509 3300027363 Bacteria 73459
49 Ga0268256_1000012 3300030500 Bacteria 794553
50 Ga0265327_10000194 3300031251 Bacteria 129264
51 Ga0395899_0008896 3300037312 Bacteria 7732
52 Ga0395899_0199515 3300037312 Bacteria 1396
53 Ga0395900_0002827 3300037418 Bacteria 18949
54 Ga0395900_0003228 3300037418 Bacteria 17658
55 Ga0395900_0013467 3300037418 Bacteria 8356
56 Ga0395900_0045235 3300037418 Bacteria 4534
57 Ga0395898_0001286 3300037466 Bacteria 36883
58 Ga0395898_0007881 3300037466 Bacteria 11299
59 Ga0395898_0156042 3300037466 Bacteria 2183
60 Ga0395905_0018513 3300037471 Bacteria 6611
61 Ga0395901_0000129 3300038443 Bacteria 97842
62 Ga0395901_0000251 3300038443 Bacteria 66862
63 Ga0395901_0004600 3300038443 Bacteria 13929
64 Ga0395901_0016309 3300038443 Bacteria 7567
65 Ga0395901_0321547 3300038443 Bacteria 1601
66 Ga0237819_02756 3300038705 Bacteria 3373
67 Ga0436363_0486422 3300039450 Bacteria 5542
68 Ga0436363_1399278 3300039450 Bacteria 2915
69 Ga0439447_001892 3300041407 Bacteria 7662
70 Ga0466959_0006944 3300045049 Bacteria 7907
71 Ga0466967_0085787 3300045976 Bacteria 2851
72 Ga0495617_001901 3300046452 Bacteria 8791
73 Ga0495590_0000105 3300046457 Bacteria 50522
74 Ga0495638_0006510 3300046460 Bacteria 8493
75 Ga0495605_0000232 3300046474 Bacteria 68352
76 Ga0495607_0129532 3300046501 Bacteria 1315
77 Ga0495606_0000772 3300046507 Bacteria 49077
78 Ga0495610_0013928 3300046512 Bacteria 4751
79 Ga0495648_0000762 3300046524 Bacteria 34391
80 Ga0495642_0000079 3300046528 Bacteria 57342
81 Ga0495654_0000117 3300046530 Bacteria 89307
82 Ga0495654_0000479 3300046530 Bacteria 33045
83 Ga0495622_0067015 3300046557 Bacteria 1659
84 Ga0495588_0039176 3300046674 Bacteria 2413
85 Ga0495669_0003313 3300046684 Bacteria 6624
86 Ga0495624_0001120 3300046690 Bacteria 21183
87 Ga0495670_0001808 3300046691 Bacteria 10516
88 Ga0495649_0029896 3300046694 Bacteria 3010
89 Ga0495589_0022182 3300046794 Bacteria 3241
90 Ga0495604_0017609 3300047317 Bacteria 5719
91 Ga0495672_0000280 3300047320 Bacteria 70727
92 Ga0495672_0028282 3300047320 Bacteria 3548
93 Ga0495672_0028512 3300047320 Bacteria 3531
94 Ga0495687_003396 3300047443 Bacteria 11602
95 Ga0495687_009052 3300047443 Bacteria 5612
96 Ga0495673_0005671 3300047469 Bacteria 7502
97 Ga0495684_0001979 3300047471 Bacteria 16453
98 Ga0495602_0054938 3300048088 Bacteria 3511
99 Ga0496121_0041790 3300048924 Bacteria 4001
100 Ga0496122_0093194 3300048925 Bacteria 2044
101 Ga0496122_0098615 3300048925 Bacteria 1962
102 Ga0496124_0000013 3300048927 Bacteria 484884
103 Ga0496126_0013387 3300048929 Bacteria 8348
104 Ga0495682_0014676 3300049460 Bacteria 2970
105 Ga0495682_0021747 3300049460 Bacteria 2402
106 Ga0501031_0128696 3300049568 Bacteria 1654
107 Ga0501033_0041663 3300049570 Bacteria 3425
108 Ga0501033_0073063 3300049570 Bacteria 2518
109 Ga0501033_0169604 3300049570 Bacteria 1568
110 Ga0501034_0004175 3300049571 Bacteria 16137
111 Ga0501034_0039688 3300049571 Bacteria 4768
112 Ga0501034_0082478 3300049571 Bacteria 3217
113 Ga0501034_0189441 3300049571 Bacteria 2020
114 Ga0501034_0244304 3300049571 Bacteria 1740
115 Ga0501034_0363032 3300049571 Bacteria 1375
116 Ga0501036_0175560 3300049572 Bacteria 1804
117 Ga0501037_0122491 3300049573 Bacteria 1869
118 Ga0501038_0073174 3300049574 Bacteria 2902
119 Ga0501038_0164654 3300049574 Bacteria 1800
120 Ga0501039_0046682 3300049575 Bacteria 3347
121 Ga0501039_0123267 3300049575 Bacteria 2031
122 Ga0501040_0000009 3300049576 Bacteria 81667
123 Ga0501042_0000724 3300049578 Bacteria 17916
124 Ga0501042_0022142 3300049578 Bacteria 4438
125 Ga0501043_0030576 3300049579 Bacteria 4232
126 Ga0501043_0102795 3300049579 Bacteria 2246
127 Ga0501043_0110067 3300049579 Bacteria 2163
128 Ga0501047_0002841 3300049581 Bacteria 16420
129 Ga0501047_0004079 3300049581 Bacteria 13745
130 Ga0501047_0097268 3300049581 Bacteria 2822
131 Ga0501068_0008613 3300049584 Bacteria 5683
132 Ga0501070_0055467 3300049586 Bacteria 3284
133 Ga0501070_0123810 3300049586 Bacteria 2137
134 Ga0501073_0045788 3300049589 Bacteria 3080
135 Ga0501080_0076612 3300049742 Bacteria 3110
136 Ga0501081_0126860 3300049743 Bacteria 1821
137 Ga0501083_0021775 3300049744 Bacteria 4452
138 Ga0501035_0002376 3300049822 Bacteria 18490
139 Ga0501035_0003200 3300049822 Bacteria 15684
140 Ga0501035_0063041 3300049822 Bacteria 3298
141 Ga0501035_0146314 3300049822 Bacteria 2052
142 Ga0501044_0000197 3300049823 Bacteria 76234
143 Ga0501044_0002415 3300049823 Bacteria 21299
144 Ga0501044_0018397 3300049823 Bacteria 7486
145 Ga0501044_0041968 3300049823 Bacteria 4762
146 Ga0501044_0044043 3300049823 Bacteria 4634
147 Ga0501044_0067149 3300049823 Bacteria 3654
148 nmdc:mga06z11_944_c1 3300050494 Bacteria 10583
149 Ga0501084_0149529 3300054114 Bacteria 1968
150 Ga0501082_0225767 3300060353 Bacteria 1630
151 Ga0501082_0235148 3300060353 Bacteria 1595
152 2885279071 2885270888 Bacteria 9831543
153 2509149521 2508501128 Bacteria 8613869
154 2512032658 2511231221 Bacteria 6846400
155 2513656918 2513237096 Bacteria 8722461
156 2513696736 2513237101 Bacteria 7952346
157 2513855988 2513237137 Bacteria 9558895
158 2513918658 2513237145 Bacteria 8979722
159 2513953522 2513237150 Bacteria 6553639
160 2514042680 2513237165 Bacteria 6771773
161 2514050488 2513237166 Bacteria 10373764
162 2516210423 2516143018 Bacteria 6951533
163 2517107670 2517093001 Bacteria 9002274
164 2561468172 2558860983 Bacteria 4133860
165 2599101281 2597490356 Bacteria 7030811
166 2599905073 2599185292 Bacteria 6290804
167 2601536115 2600255256 Bacteria 5597742
168 2601541149 2600255257 Bacteria 5597196
169 2601759773 2600255310 Bacteria 5600903
170 2601765335 2600255311 Bacteria 5598766
171 2603640892 2602042046 Bacteria 5483348
172 2643982197 2643221594 Bacteria 5811388
173 2644088863 2643221614 Bacteria 4260023
174 2644120952 2643221621 Bacteria 6212786
175 2644345506 2643221661 Bacteria 4267604
176 2644359003 2643221664 Bacteria 7272945
177 2644365510 2643221666 Bacteria 4265935
178 2644742527 2643221736 Bacteria 6608466
179 2723878282 2721755763 Bacteria 4464185
180 2729148074 2728369097 Bacteria 4333476
181 2739201626 2738543004 Bacteria 6381073
182 2774870170 2773857925 Bacteria 6472445
183 2792840305 2791355137 Bacteria 9654227
184 2813731036 2811995292 Bacteria 5303342
185 2814698657 2814123068 Bacteria 5687681
186 2834578882 2834578030 Bacteria 3530182
187 2834645482 2834641062 Bacteria 5559922
188 2838060571 2838054893 Bacteria 7451788
189 2846953997 2846952575 Bacteria 6587527
190 2847933822 2847930680 Bacteria 9342022
191 2848859828 2848858292 Bacteria 7391279
192 2857543270 2857542790 Bacteria 5326616
193 2858951589 2858950400 Bacteria 6783797
194 2874605606 2874604998 Bacteria 7834745
195 2876767122 2876761206 Bacteria 10111113
196 2879087349 2879083081 Bacteria 8587928
197 2881416106 2881412998 Bacteria 6492157
198 2883088530 2883087390 Bacteria 9532701
199 2895518538 2895511927 Bacteria 6802080
200 2899262375 2899259804 Bacteria 3320927
201 2904620362 2904615490 Bacteria 10047340
202 2904622021 2904615490 Bacteria 10047340
203 2906643764 2906643746 Bacteria 8722424
204 2913301331 2913295892 Bacteria 6333755
205 2968124015 2968117919 Bacteria 6536078
206 3003667569 3003665799 Bacteria 7279786
207 641641799 641522639 Bacteria 7737025
208 643592424 643348564 Bacteria 8839022
209 643663235 643348564 Bacteria 8839022
210 8056684144 8056681323 Bacteria 8472857
211 rootH1_10072073
212 Ga0055529_1000712
213 Ga0058692_1003956
214 Ga0065714_10069171
215 Ga0070661_100003885
216 Ga0070661_100016549
217 Ga0070714_100017251
218 Ga0070713_100015047
219 Ga0070681_10001636
220 Ga0070679_100026168
221 Ga0070684_100013203
222 Ga0068853_100009924
223 Ga0068853_100016310
224 Ga0068855_100029932
225 Ga0070664_100005811
226 Ga0070664_100200821
227 Ga0068857_100099811
228 Ga0068856_100010058
229 Ga0081455_10012536
230 Ga0075364_10077978
231 Ga0099824_1010817
232 Ga0099823_1000007
233 Ga0105238_10052230
234 Ga0157373_10002105
235 Ga0157370_10073739
236 Ga0157370_10100969
237 Ga0157369_10075790
238 Ga0163162_10004466
239 Ga0157372_10078232
240 Ga0209455_1000282
241 Ga0207695_10035722
242 Ga0207649_10022121
243 Ga0207694_10028706
244 Ga0207700_10046296
245 Ga0207664_10020489
246 Ga0207679_10009750
247 Ga0207667_10014140
248 Ga0207639_10051482
249 Ga0207702_10053975
250 Ga0207674_10103038
251 Ga0209389_1000050
252 Ga0209389_1000162
253 Ga0209371_1000046
254 Ga0209589_1000001
255 Ga0209489_100001
256 Ga0209489_110982
257 Ga0209700_100001
258 Ga0209700_100509
259 Ga0268256_1000012
260 Ga0265327_10000194
261 Ga0395899_0008896
262 Ga0395899_0199515
263 Ga0395900_0002827
264 Ga0395900_0003228
265 Ga0395900_0013467
266 Ga0395900_0045235
267 Ga0395898_0001286
268 Ga0395898_0007881
269 Ga0395898_0156042
270 Ga0395905_0018513
271 Ga0395901_0000129
272 Ga0395901_0000251
273 Ga0395901_0004600
274 Ga0395901_0016309
275 Ga0395901_0321547
276 Ga0237819_02756
277 Ga0436363_0486422
278 Ga0436363_1399278
279 Ga0439447_001892
280 Ga0466959_0006944
281 Ga0466967_0085787
282 Ga0495617_001901
283 Ga0495590_0000105
284 Ga0495638_0006510
285 Ga0495605_0000232
286 Ga0495607_0129532
287 Ga0495606_0000772
288 Ga0495610_0013928
289 Ga0495648_0000762
290 Ga0495642_0000079
291 Ga0495654_0000117
292 Ga0495654_0000479
293 Ga0495622_0067015
294 Ga0495588_0039176
295 Ga0495669_0003313
296 Ga0495624_0001120
297 Ga0495670_0001808
298 Ga0495649_0029896
299 Ga0495589_0022182
300 Ga0495604_0017609
301 Ga0495672_0000280
302 Ga0495672_0028282
303 Ga0495672_0028512
304 Ga0495687_003396
305 Ga0495687_009052
306 Ga0495673_0005671
307 Ga0495684_0001979
308 Ga0495602_0054938
309 Ga0496121_0041790
310 Ga0496122_0093194
311 Ga0496122_0098615
312 Ga0496124_0000013
313 Ga0496126_0013387
314 Ga0495682_0014676
315 Ga0495682_0021747
316 Ga0501031_0128696
317 Ga0501033_0041663
318 Ga0501033_0073063
319 Ga0501033_0169604
320 Ga0501034_0004175
321 Ga0501034_0039688
322 Ga0501034_0082478
323 Ga0501034_0189441
324 Ga0501034_0244304
325 Ga0501034_0363032
326 Ga0501036_0175560
327 Ga0501037_0122491
328 Ga0501038_0073174
329 Ga0501038_0164654
330 Ga0501039_0046682
331 Ga0501039_0123267
332 Ga0501040_0000009
333 Ga0501042_0000724
334 Ga0501042_0022142
335 Ga0501043_0030576
336 Ga0501043_0102795
337 Ga0501043_0110067
338 Ga0501047_0002841
339 Ga0501047_0004079
340 Ga0501047_0097268
341 Ga0501068_0008613
342 Ga0501070_0055467
343 Ga0501070_0123810
344 Ga0501073_0045788
345 Ga0501080_0076612
346 Ga0501081_0126860
347 Ga0501083_0021775
348 Ga0501035_0002376
349 Ga0501035_0003200
350 Ga0501035_0063041
351 Ga0501035_0146314
352 Ga0501044_0000197
353 Ga0501044_0002415
354 Ga0501044_0018397
355 Ga0501044_0041968
356 Ga0501044_0044043
357 Ga0501044_0067149
358 nmdc:mga06z11_944_c1
359 Ga0501084_0149529
360 Ga0501082_0225767
361 Ga0501082_0235148
362 2885279071
363 2509149521
364 2512032658
365 2513656918
366 2513696736
367 2513855988
368 2513918658
369 2513953522
370 2514042680
371 2514050488
372 2516210423
373 2517107670
374 2561468172
375 2599101281
376 2599905073
377 2601536115
378 2601541149
379 2601759773
380 2601765335
381 2603640892
382 2643982197
383 2644088863
384 2644120952
385 2644345506
386 2644359003
387 2644365510
388 2644742527
389 2723878282
390 2729148074
391 2739201626
392 2774870170
393 2792840305
394 2813731036
395 2814698657
396 2834578882
397 2834645482
398 2838060571
399 2846953997
400 2847933822
401 2848859828
402 2857543270
403 2858951589
404 2874605606
405 2876767122
406 2879087349
407 2881416106
408 2883088530
409 2895518538
410 2899262375
411 2904620362
412 2904622021
413 2906643764
414 2913301331
415 2968124015
416 3003667569
417 641641799
418 643592424
419 643663235
420 8056684144

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

24

269

0.86

PF07690

MFS_1

Major Facilitator Superfamily

226

433

0.83

PF00083

Sugar_tr

Sugar (and other) transporter

6

196

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.8502 32 414
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8414 38 414
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.8378 32 414
6e9n-assembly2.cif.gz_B e. coli d-galactonate:proton symporter in the inward open form 0.8374 33 409
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8351 38 414
ID Description Score Start End Superfamily
af_Q4D047_16_187_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9315 244 408 1.20.1250.20
af_Q9VPD9_294_503_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9084 235 410 1.20.1250.20
af_Q2G2W1_141_346_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.905 239 409 1.20.1250.20
af_Q86M88_601_814_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9035 236 412 1.20.1250.20
af_P25744_212_408_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9002 237 414 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A367I4M6-F1-model_v4 MFS transporter 0.9547 30 429 GO:0016020
GO:0022857
AF-A0A858ZZ76-F1-model_v4 MFS transporter 0.9541 36 415 GO:0016020
GO:0022857
AF-A0A3D2CSI6-F1-model_v4 MFS transporter 0.9458 36 416 GO:0016020
GO:0022857
GO:0042981
AF-A0A367I4M6-F1-model_v4 MFS transporter 0.9433 30 429 GO:0016020
GO:0022857
AF-A0A3C7W4I2-F1-model_v4 MFS transporter 0.9289 28 408 GO:0016020
GO:0022857

Map