F322687

General Info

Members Datasets Scaffolds Average Seq Length
212 146 211 285

Family's Representative Sequence

Representative Sequence 3300006237|Ga0097621_100015582|Ga0097621_1000155826
Length 302
Sequence MPVGQVARPYTLFFQENIQGPEMTSDAGSNIISARQDELLAAWLRTLQSSGVSTDRRTSVAQIEQEAREFVKLLAECTSGGYTADIAAPNWMPLRNFLEEFSRRRAAQGFTADVTASYIFSFKKALFEVQNAVDGGGKSLIDLMWKWTEIVDALGLYTISTYQKSREDVIRRQQDDLLELSTPVIKLWEGVLALPMIGTLDSSRTQVVMETLLQRIVDTGSSIAILDITGVPTVDTLVAQHLMKTVTAIRLMGADCIISGIRPQIAQTIVHLGIDLTGITTKANLADALAVAMQRITALSAT

Samples

Sample ID Description Type Environment
1 2738541337 Pelomonas sp. BT06 Isolate Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
99 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
104 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
105 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
108 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
109 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
110 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
111 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
112 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
113 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
116 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
119 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.06
Metatranscriptomes 0.47
Isolates 0.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.47
Nodule 0
Rhizoplane 4.72
Rhizosphere 93.4
Stem 0
Stem Tuber 0
Unclassified 1.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10194800 3300003323 Bacteria 2309
2 Ga0065707_10117266 3300005295 Bacteria 2216
3 Ga0070676_10010887 3300005328 Bacteria 4939
4 Ga0070676_10106445 3300005328 Bacteria 1740
5 Ga0070683_100088325 3300005329 Bacteria 2908
6 Ga0070683_100093720 3300005329 Bacteria 2822
7 Ga0070683_100193318 3300005329 Bacteria 1932
8 Ga0070683_100272476 3300005329 Bacteria 1610
9 Ga0070670_100321681 3300005331 Bacteria 1355
10 Ga0070677_10004578 3300005333 Bacteria 4521
11 Ga0070677_10125543 3300005333 Bacteria 1164
12 Ga0068869_100024392 3300005334 Bacteria 4189
13 Ga0070666_10067269 3300005335 Bacteria 2433
14 Ga0070680_100497623 3300005336 Bacteria 1043
15 Ga0070682_100007954 3300005337 Bacteria 5965
16 Ga0070682_100145127 3300005337 Bacteria 1622
17 Ga0070682_100166465 3300005337 Bacteria 1528
18 Ga0070689_100105128 3300005340 Bacteria 2239
19 Ga0070689_100217580 3300005340 Bacteria 1566
20 Ga0070668_100056612 3300005347 Bacteria 3028
21 Ga0070669_100022808 3300005353 Bacteria 4477
22 Ga0070674_100081390 3300005356 Bacteria 2314
23 Ga0070673_100029907 3300005364 Bacteria 4068
24 Ga0070659_100493388 3300005366 Bacteria 1043
25 Ga0070713_100119089 3300005436 Bacteria 2313
26 Ga0070713_100205304 3300005436 Bacteria 1781
27 Ga0070701_10080293 3300005438 Bacteria 1764
28 Ga0070701_10100386 3300005438 Bacteria 1602
29 Ga0070700_100087452 3300005441 Bacteria 2026
30 Ga0070700_100164704 3300005441 Bacteria 1530
31 Ga0070678_100006772 3300005456 Bacteria 6751
32 Ga0070678_100264269 3300005456 Bacteria 1448
33 Ga0070678_100343897 3300005456 Bacteria 1280
34 Ga0070681_10061653 3300005458 Bacteria 3724
35 Ga0068867_100021645 3300005459 Bacteria 4589
36 Ga0070685_10147289 3300005466 Bacteria 1489
37 Ga0070679_100074803 3300005530 Bacteria 3377
38 Ga0070679_100611423 3300005530 Bacteria 1033
39 Ga0070684_100052479 3300005535 Bacteria 3546
40 Ga0068853_100007828 3300005539 Bacteria 8570
41 Ga0070672_100010920 3300005543 Bacteria 6319
42 Ga0070672_100063445 3300005543 Bacteria 2918
43 Ga0070672_100082872 3300005543 Bacteria 2573
44 Ga0070693_100072946 3300005547 Bacteria 2026
45 Ga0070665_100012652 3300005548 Bacteria 8498
46 Ga0070665_100063195 3300005548 Bacteria 3712
47 Ga0070665_100661618 3300005548 Bacteria 1057
48 Ga0068855_100173046 3300005563 Bacteria 2444
49 Ga0070664_100466249 3300005564 Bacteria 1161
50 Ga0068857_100299633 3300005577 Bacteria 1482
51 Ga0068856_100037215 3300005614 Bacteria 4774
52 Ga0068856_100057314 3300005614 Bacteria 3846
53 Ga0068856_100320406 3300005614 Bacteria 1567
54 Ga0068852_100073537 3300005616 Bacteria 3007
55 Ga0068866_10245544 3300005718 Bacteria 1093
56 Ga0068861_100042451 3300005719 Bacteria 3408
57 Ga0068851_10139838 3300005834 Bacteria 1316
58 Ga0068870_10001831 3300005840 Bacteria 8732
59 Ga0068870_10085002 3300005840 Bacteria 1758
60 Ga0068863_100148526 3300005841 Bacteria 2242
61 Ga0068862_100037380 3300005844 Bacteria 4115
62 Ga0070717_10054495 3300006028 Bacteria 3298
63 Ga0097621_100015582 3300006237 Bacteria 5725
64 Ga0068871_100013163 3300006358 Bacteria 6135
65 Ga0068871_100128022 3300006358 Bacteria 2151
66 Ga0068871_100640512 3300006358 Bacteria 969
67 Ga0075433_10712389 3300006852 Bacteria 879
68 Ga0068865_100016863 3300006881 Bacteria 4685
69 Ga0075436_100009663 3300006914 Bacteria 6602
70 Ga0105240_10000651 3300009093 Bacteria 64114
71 Ga0105240_10042530 3300009093 Bacteria 5789
72 Ga0105240_10790290 3300009093 Bacteria 1029
73 Ga0111539_10013378 3300009094 Bacteria 10257
74 Ga0105242_10097101 3300009176 Bacteria 2490
75 Ga0105242_10251071 3300009176 Bacteria 1594
76 Ga0105248_10201826 3300009177 Bacteria 2240
77 Ga0105238_10000084 3300009551 Bacteria 106982
78 Ga0105238_10111347 3300009551 Bacteria 2718
79 Ga0105238_10217698 3300009551 Bacteria 1886
80 Ga0105238_10298350 3300009551 Bacteria 1595
81 Ga0157369_10034362 3300013105 Bacteria 5565
82 Ga0157369_10138388 3300013105 Bacteria 2577
83 Ga0157374_10115162 3300013296 Bacteria 2589
84 Ga0163162_10034846 3300013306 Bacteria 5011
85 Ga0163162_10081386 3300013306 Bacteria 3309
86 Ga0157372_10076051 3300013307 Bacteria 3790
87 Ga0157372_10201729 3300013307 Bacteria 2304
88 Ga0163163_10271369 3300014325 Bacteria 1748
89 Ga0157380_10016317 3300014326 Bacteria 5475
90 Ga0157380_10056857 3300014326 Bacteria 3113
91 Ga0157380_10386514 3300014326 Bacteria 1323
92 Ga0157376_10048788 3300014969 Bacteria 3504
93 Ga0157376_10373478 3300014969 Bacteria 1371
94 Ga0163161_10161213 3300017792 Bacteria 1710
95 Ga0163161_10238688 3300017792 Bacteria 1413
96 Ga0207682_10007315 3300025893 Bacteria 4404
97 Ga0207682_10085928 3300025893 Bacteria 1356
98 Ga0207642_10083332 3300025899 Bacteria 1559
99 Ga0207645_10124387 3300025907 Bacteria 1676
100 Ga0207645_10393425 3300025907 Bacteria 931
101 Ga0207643_10001110 3300025908 Bacteria 15981
102 Ga0207643_10102716 3300025908 Bacteria 1677
103 Ga0207705_10083435 3300025909 Bacteria 2331
104 Ga0207695_10001778 3300025913 Bacteria 34036
105 Ga0207695_10561198 3300025913 Bacteria 1023
106 Ga0207693_10033295 3300025915 Bacteria 4067
107 Ga0207663_10280493 3300025916 Bacteria 1237
108 Ga0207657_10098454 3300025919 Bacteria 2431
109 Ga0207681_10040778 3300025923 Bacteria 3091
110 Ga0207694_10004778 3300025924 Bacteria 10532
111 Ga0207694_10195098 3300025924 Bacteria 1646
112 Ga0207694_10256897 3300025924 Bacteria 1431
113 Ga0207650_10480494 3300025925 Bacteria 1037
114 Ga0207659_10016562 3300025926 Bacteria 4799
115 Ga0207700_10380982 3300025928 Bacteria 1233
116 Ga0207690_10476902 3300025932 Bacteria 1006
117 Ga0207706_10046935 3300025933 Bacteria 3823
118 Ga0207670_10076581 3300025936 Bacteria 2328
119 Ga0207670_10160238 3300025936 Bacteria 1679
120 Ga0207669_10060730 3300025937 Bacteria 2319
121 Ga0207669_10141522 3300025937 Bacteria 1670
122 Ga0207704_10010445 3300025938 Bacteria 4531
123 Ga0207704_10229296 3300025938 Bacteria 1380
124 Ga0207665_10167076 3300025939 Bacteria 1587
125 Ga0207691_10001110 3300025940 Bacteria 26799
126 Ga0207691_10006880 3300025940 Bacteria 10970
127 Ga0207691_10030858 3300025940 Bacteria 5006
128 Ga0207691_10180780 3300025940 Bacteria 1843
129 Ga0207689_10012686 3300025942 Bacteria 7198
130 Ga0207689_10223038 3300025942 Bacteria 1558
131 Ga0207667_10027847 3300025949 Bacteria 6144
132 Ga0207651_10009347 3300025960 Bacteria 5360
133 Ga0207651_10242712 3300025960 Bacteria 1469
134 Ga0207668_10017964 3300025972 Bacteria 4441
135 Ga0207668_10047610 3300025972 Bacteria 2937
136 Ga0207668_10072538 3300025972 Bacteria 2464
137 Ga0207640_10374485 3300025981 Bacteria 1152
138 Ga0207658_10052267 3300025986 Bacteria 3015
139 Ga0207708_10187395 3300026075 Bacteria 1645
140 Ga0207641_10047686 3300026088 Bacteria 3613
141 Ga0207641_10121921 3300026088 Bacteria 2328
142 Ga0207648_10030731 3300026089 Bacteria 4754
143 Ga0207648_10038294 3300026089 Bacteria 4220
144 Ga0207648_10056617 3300026089 Bacteria 3421
145 Ga0207675_100019419 3300026118 Bacteria 6341
146 Ga0207675_100021410 3300026118 Bacteria 6023
147 Ga0207675_100397943 3300026118 Bacteria 1357
148 Ga0207675_100768508 3300026118 Bacteria 975
149 Ga0207683_10029442 3300026121 Bacteria 4754
150 Ga0207683_10029730 3300026121 Bacteria 4731
151 Ga0207698_10297086 3300026142 Bacteria 1502
152 Ga0268266_10069901 3300028379 Bacteria 3043
153 Ga0268266_10177827 3300028379 Bacteria 1935
154 Ga0268266_10218038 3300028379 Bacteria 1753
155 Ga0268265_10023524 3300028380 Bacteria 4344
156 Ga0265760_10005318 3300031090 Bacteria 3692
157 Ga0265320_10006897 3300031240 Bacteria 7100
158 Ga0265340_10059806 3300031247 Bacteria 1827
159 Ga0307509_10019203 3300031507 Bacteria 7809
160 Ga0307408_100114214 3300031548 Bacteria 2080
161 Ga0307413_10226963 3300031824 Bacteria 1368
162 Ga0307410_10270756 3300031852 Bacteria 1328
163 Ga0307407_10150815 3300031903 Bacteria 1510
164 Ga0307415_100233795 3300032126 Bacteria 1482
165 Ga0373955_0043719 3300035172 Bacteria 2411
166 Ga0373935_0216696 3300035692 Bacteria 1328
167 Ga0451791_1628420 3300041451 Bacteria 1074
168 Ga0451800_1099771 3300041459 Bacteria 1206
169 Ga0451807_1327508 3300041486 Bacteria 4075
170 Ga0451807_2694753 3300041486 Bacteria 3461
171 Ga0450916_019973 3300042530 Bacteria 913
172 Ga0495638_0031981 3300046460 Bacteria 3377
173 Ga0495616_0003390 3300046513 Bacteria 10217
174 Ga0495642_0013679 3300046528 Bacteria 3142
175 Ga0495633_0078874 3300046558 Bacteria 1533
176 Ga0495656_0009985 3300046615 Bacteria 3435
177 Ga0495656_0080588 3300046615 Bacteria 1468
178 Ga0495668_0109796 3300046616 Bacteria 1509
179 Ga0495625_0050338 3300046660 Bacteria 2990
180 Ga0495625_0104474 3300046660 Bacteria 1942
181 Ga0495669_0016316 3300046684 Bacteria 3180
182 Ga0495649_0005822 3300046694 Bacteria 7758
183 Ga0495600_0119290 3300046809 Bacteria 1716
184 Ga0495686_0136824 3300047472 Bacteria 1448
185 Ga0496105_0041565 3300048908 Bacteria 3789
186 Ga0496110_0115775 3300048913 Bacteria 2413
187 Ga0496111_0006564 3300048914 Bacteria 7565
188 Ga0496111_0124972 3300048914 Bacteria 1901
189 Ga0496112_0098756 3300048915 Bacteria 2889
190 Ga0496113_0013065 3300048916 Bacteria 5607
191 Ga0501034_0297122 3300049571 Bacteria 1552
192 Ga0501067_0072491 3300049583 Bacteria 1908
193 Ga0501068_0043383 3300049584 Bacteria 2705
194 Ga0501069_0058159 3300049585 Bacteria 2156
195 Ga0501070_0144308 3300049586 Bacteria 1965
196 Ga0501071_0005157 3300049587 Bacteria 8370
197 Ga0501073_0040644 3300049589 Bacteria 3289
198 Ga0501074_0003382 3300049590 Bacteria 11302
199 Ga0501075_0280627 3300049591 Bacteria 1269
200 Ga0501076_0094108 3300049592 Bacteria 2412
201 Ga0501077_0038900 3300049593 Bacteria 3029
202 Ga0501079_0005857 3300049741 Bacteria 9196
203 Ga0501080_0004136 3300049742 Bacteria 12865
204 Ga0501080_0095321 3300049742 Bacteria 2763
205 Ga0501083_0022227 3300049744 Bacteria 4402
206 Ga0501035_0128662 3300049822 Bacteria 2209
207 Ga0501044_0015753 3300049823 Bacteria 8142
208 nmdc:mga08x19_55514_c1 3300050514 Bacteria 2553
209 Ga0500578_0000007 3300053086 Bacteria 229642
210 Ga0501084_0008470 3300054114 Bacteria 8505
211 Ga0501082_0085228 3300060353 Bacteria 2725

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10000651 Ga0105240_1000065137 233
2 3300025939 Ga0207665_10167076 Ga0207665_101670761 246
3 3300005548 Ga0070665_100661618 Ga0070665_1006616181 271
4 3300026142 Ga0207698_10297086 Ga0207698_102970862 272
5 3300049571 Ga0501034_0297122 Ga0501034_0297122_362_1198 274
6 3300046528 Ga0495642_0013679 Ga0495642_0013679_484_1326 275
7 3300046558 Ga0495633_0078874 Ga0495633_0078874_189_1031 275
8 3300046615 Ga0495656_0009985 Ga0495656_0009985_1325_2167 275
9 iso_pu_bacteria 2738541337 2739055327 275
10 3300046694 Ga0495649_0005822 Ga0495649_0005822_4715_5545 276
11 3300053086 Ga0500578_0000007 Ga0500578_0000007_7564_8439 276
12 3300009551 Ga0105238_10298350 Ga0105238_102983502 277
13 3300013307 Ga0157372_10076051 Ga0157372_100760513 277
14 3300005329 Ga0070683_100088325 Ga0070683_1000883253 278
15 3300005329 Ga0070683_100193318 Ga0070683_1001933182 278
16 3300005336 Ga0070680_100497623 Ga0070680_1004976231 278
17 3300005436 Ga0070713_100205304 Ga0070713_1002053042 278
18 3300005458 Ga0070681_10061653 Ga0070681_100616535 278
19 3300005530 Ga0070679_100074803 Ga0070679_1000748032 278
20 3300005530 Ga0070679_100611423 Ga0070679_1006114231 278
21 3300005535 Ga0070684_100052479 Ga0070684_1000524792 278
22 3300005547 Ga0070693_100072946 Ga0070693_1000729462 278
23 3300005614 Ga0068856_100320406 Ga0068856_1003204061 278
24 3300005616 Ga0068852_100073537 Ga0068852_1000735374 278
25 3300005834 Ga0068851_10139838 Ga0068851_101398381 278
26 3300006028 Ga0070717_10054495 Ga0070717_100544955 278
27 3300009093 Ga0105240_10042530 Ga0105240_100425303 278
28 3300009551 Ga0105238_10111347 Ga0105238_101113472 278
29 3300009551 Ga0105238_10217698 Ga0105238_102176981 278
30 3300013105 Ga0157369_10034362 Ga0157369_100343623 278
31 3300013105 Ga0157369_10138388 Ga0157369_101383883 278
32 3300013296 Ga0157374_10115162 Ga0157374_101151624 278
33 3300013306 Ga0163162_10081386 Ga0163162_100813864 278
34 3300013307 Ga0157372_10201729 Ga0157372_102017293 278
35 3300025909 Ga0207705_10083435 Ga0207705_100834353 278
36 3300025915 Ga0207693_10033295 Ga0207693_100332953 278
37 3300025916 Ga0207663_10280493 Ga0207663_102804932 278
38 3300025919 Ga0207657_10098454 Ga0207657_100984542 278
39 3300025924 Ga0207694_10195098 Ga0207694_101950981 278
40 3300025928 Ga0207700_10380982 Ga0207700_103809822 278
41 3300025949 Ga0207667_10027847 Ga0207667_100278475 278
42 3300025981 Ga0207640_10374485 Ga0207640_103744851 278
43 3300035692 Ga0373935_0216696 Ga0373935_0216696_396_1283 278
44 3300046684 Ga0495669_0016316 Ga0495669_0016316_489_1376 278
45 3300046809 Ga0495600_0119290 Ga0495600_0119290_318_1202 278
46 3300048908 Ga0496105_0041565 Ga0496105_0041565_1837_2772 278
47 3300048913 Ga0496110_0115775 Ga0496110_0115775_1118_2014 278
48 3300048914 Ga0496111_0006564 Ga0496111_0006564_386_1267 278
49 3300048914 Ga0496111_0124972 Ga0496111_0124972_637_1521 278
50 3300048915 Ga0496112_0098756 Ga0496112_0098756_1610_2500 278
51 3300048916 Ga0496113_0013065 Ga0496113_0013065_69_953 278
52 3300005329 Ga0070683_100272476 Ga0070683_1002724761 279
53 3300005539 Ga0068853_100007828 Ga0068853_1000078283 279
54 3300005563 Ga0068855_100173046 Ga0068855_1001730461 279
55 3300009093 Ga0105240_10790290 Ga0105240_107902902 279
56 3300013306 Ga0163162_10034846 Ga0163162_100348462 279
57 3300025913 Ga0207695_10561198 Ga0207695_105611982 279
58 3300025924 Ga0207694_10256897 Ga0207694_102568972 279
59 3300005337 Ga0070682_100007954 Ga0070682_1000079541 280
60 3300005564 Ga0070664_100466249 Ga0070664_1004662492 280
61 3300006237 Ga0097621_100015582 Ga0097621_1000155826 280
62 3300006358 Ga0068871_100013163 Ga0068871_1000131632 280
63 3300009176 Ga0105242_10097101 Ga0105242_100971013 280
64 3300025913 Ga0207695_10001778 Ga0207695_1000177830 280
65 3300031507 Ga0307509_10019203 Ga0307509_100192034 280
66 3300031852 Ga0307410_10270756 Ga0307410_102707561 280
67 3300031903 Ga0307407_10150815 Ga0307407_101508151 280
68 3300032126 Ga0307415_100233795 Ga0307415_1002337952 280
69 3300035172 Ga0373955_0043719 Ga0373955_0043719_336_1307 280
70 3300046616 Ga0495668_0109796 Ga0495668_0109796_362_1204 280
71 3300046660 Ga0495625_0104474 Ga0495625_0104474_308_1150 280
72 3300005328 Ga0070676_10010887 Ga0070676_100108874 281
73 3300005328 Ga0070676_10106445 Ga0070676_101064452 281
74 3300005331 Ga0070670_100321681 Ga0070670_1003216811 281
75 3300005333 Ga0070677_10004578 Ga0070677_100045782 281
76 3300005333 Ga0070677_10125543 Ga0070677_101255431 281
77 3300005334 Ga0068869_100024392 Ga0068869_1000243925 281
78 3300005335 Ga0070666_10067269 Ga0070666_100672694 281
79 3300005337 Ga0070682_100145127 Ga0070682_1001451272 281
80 3300005337 Ga0070682_100166465 Ga0070682_1001664653 281
81 3300005340 Ga0070689_100105128 Ga0070689_1001051282 281
82 3300005340 Ga0070689_100217580 Ga0070689_1002175803 281
83 3300005347 Ga0070668_100056612 Ga0070668_1000566123 281
84 3300005353 Ga0070669_100022808 Ga0070669_1000228081 281
85 3300005356 Ga0070674_100081390 Ga0070674_1000813902 281
86 3300005364 Ga0070673_100029907 Ga0070673_1000299072 281
87 3300005366 Ga0070659_100493388 Ga0070659_1004933881 281
88 3300005438 Ga0070701_10080293 Ga0070701_100802931 281
89 3300005438 Ga0070701_10100386 Ga0070701_101003863 281
90 3300005441 Ga0070700_100087452 Ga0070700_1000874522 281
91 3300005441 Ga0070700_100164704 Ga0070700_1001647041 281
92 3300005456 Ga0070678_100006772 Ga0070678_1000067727 281
93 3300005456 Ga0070678_100264269 Ga0070678_1002642693 281
94 3300005456 Ga0070678_100343897 Ga0070678_1003438972 281
95 3300005459 Ga0068867_100021645 Ga0068867_1000216453 281
96 3300005466 Ga0070685_10147289 Ga0070685_101472892 281
97 3300005543 Ga0070672_100010920 Ga0070672_1000109202 281
98 3300005543 Ga0070672_100063445 Ga0070672_1000634454 281
99 3300005543 Ga0070672_100082872 Ga0070672_1000828722 281
100 3300005548 Ga0070665_100012652 Ga0070665_1000126525 281
101 3300005548 Ga0070665_100063195 Ga0070665_1000631952 281
102 3300005577 Ga0068857_100299633 Ga0068857_1002996331 281
103 3300005614 Ga0068856_100057314 Ga0068856_1000573144 281
104 3300005718 Ga0068866_10245544 Ga0068866_102455442 281
105 3300005719 Ga0068861_100042451 Ga0068861_1000424511 281
106 3300005840 Ga0068870_10001831 Ga0068870_100018316 281
107 3300005840 Ga0068870_10085002 Ga0068870_100850021 281
108 3300005841 Ga0068863_100148526 Ga0068863_1001485262 281
109 3300005844 Ga0068862_100037380 Ga0068862_1000373805 281
110 3300006358 Ga0068871_100128022 Ga0068871_1001280222 281
111 3300006358 Ga0068871_100640512 Ga0068871_1006405122 281
112 3300006881 Ga0068865_100016863 Ga0068865_1000168632 281
113 3300009094 Ga0111539_10013378 Ga0111539_100133784 281
114 3300009176 Ga0105242_10251071 Ga0105242_102510711 281
115 3300009177 Ga0105248_10201826 Ga0105248_102018264 281
116 3300014325 Ga0163163_10271369 Ga0163163_102713692 281
117 3300014326 Ga0157380_10016317 Ga0157380_100163173 281
118 3300014326 Ga0157380_10056857 Ga0157380_100568573 281
119 3300014326 Ga0157380_10386514 Ga0157380_103865141 281
120 3300014969 Ga0157376_10048788 Ga0157376_100487882 281
121 3300014969 Ga0157376_10373478 Ga0157376_103734782 281
122 3300017792 Ga0163161_10161213 Ga0163161_101612134 281
123 3300017792 Ga0163161_10238688 Ga0163161_102386881 281
124 3300025893 Ga0207682_10007315 Ga0207682_100073152 281
125 3300025893 Ga0207682_10085928 Ga0207682_100859282 281
126 3300025899 Ga0207642_10083332 Ga0207642_100833322 281
127 3300025907 Ga0207645_10124387 Ga0207645_101243873 281
128 3300025907 Ga0207645_10393425 Ga0207645_103934251 281
129 3300025908 Ga0207643_10001110 Ga0207643_1000111012 281
130 3300025908 Ga0207643_10102716 Ga0207643_101027162 281
131 3300025923 Ga0207681_10040778 Ga0207681_100407782 281
132 3300025925 Ga0207650_10480494 Ga0207650_104804941 281
133 3300025926 Ga0207659_10016562 Ga0207659_100165626 281
134 3300025932 Ga0207690_10476902 Ga0207690_104769021 281
135 3300025933 Ga0207706_10046935 Ga0207706_100469352 281
136 3300025936 Ga0207670_10076581 Ga0207670_100765813 281
137 3300025936 Ga0207670_10160238 Ga0207670_101602383 281
138 3300025937 Ga0207669_10060730 Ga0207669_100607301 281
139 3300025937 Ga0207669_10141522 Ga0207669_101415223 281
140 3300025938 Ga0207704_10010445 Ga0207704_100104454 281
141 3300025938 Ga0207704_10229296 Ga0207704_102292961 281
142 3300025940 Ga0207691_10001110 Ga0207691_1000111011 281
143 3300025940 Ga0207691_10006880 Ga0207691_100068803 281
144 3300025940 Ga0207691_10030858 Ga0207691_100308581 281
145 3300025940 Ga0207691_10180780 Ga0207691_101807803 281
146 3300025942 Ga0207689_10012686 Ga0207689_100126862 281
147 3300025942 Ga0207689_10223038 Ga0207689_102230382 281
148 3300025960 Ga0207651_10009347 Ga0207651_100093475 281
149 3300025960 Ga0207651_10242712 Ga0207651_102427122 281
150 3300025972 Ga0207668_10017964 Ga0207668_100179642 281
151 3300025972 Ga0207668_10047610 Ga0207668_100476102 281
152 3300025972 Ga0207668_10072538 Ga0207668_100725384 281
153 3300025986 Ga0207658_10052267 Ga0207658_100522673 281
154 3300026075 Ga0207708_10187395 Ga0207708_101873953 281
155 3300026088 Ga0207641_10047686 Ga0207641_100476865 281
156 3300026088 Ga0207641_10121921 Ga0207641_101219212 281
157 3300026089 Ga0207648_10030731 Ga0207648_100307312 281
158 3300026089 Ga0207648_10038294 Ga0207648_100382944 281
159 3300026089 Ga0207648_10056617 Ga0207648_100566173 281
160 3300026118 Ga0207675_100019419 Ga0207675_1000194193 281
161 3300026118 Ga0207675_100021410 Ga0207675_1000214102 281
162 3300026118 Ga0207675_100397943 Ga0207675_1003979432 281
163 3300026118 Ga0207675_100768508 Ga0207675_1007685082 281
164 3300026121 Ga0207683_10029442 Ga0207683_100294422 281
165 3300026121 Ga0207683_10029730 Ga0207683_100297306 281
166 3300028379 Ga0268266_10069901 Ga0268266_100699012 281
167 3300028379 Ga0268266_10177827 Ga0268266_101778271 281
168 3300028379 Ga0268266_10218038 Ga0268266_102180382 281
169 3300028380 Ga0268265_10023524 Ga0268265_100235245 281
170 3300031090 Ga0265760_10005318 Ga0265760_100053182 281
171 3300031548 Ga0307408_100114214 Ga0307408_1001142143 281
172 3300031824 Ga0307413_10226963 Ga0307413_102269631 281
173 3300041451 Ga0451791_1628420 Ga0451791_1628420_80_925 281
174 3300041459 Ga0451800_1099771 Ga0451800_1099771_37_882 281
175 3300041486 Ga0451807_1327508 Ga0451807_1327508_2854_3699 281
176 3300041486 Ga0451807_2694753 Ga0451807_2694753_576_1421 281
177 3300042530 Ga0450916_019973 Ga0450916_019973_25_870 281
178 3300046460 Ga0495638_0031981 Ga0495638_0031981_2074_2919 281
179 3300046513 Ga0495616_0003390 Ga0495616_0003390_1506_2351 281
180 3300046615 Ga0495656_0080588 Ga0495656_0080588_397_1242 281
181 3300046660 Ga0495625_0050338 Ga0495625_0050338_140_985 281
182 3300047472 Ga0495686_0136824 Ga0495686_0136824_254_1099 281
183 3300049583 Ga0501067_0072491 Ga0501067_0072491_594_1439 281
184 3300049584 Ga0501068_0043383 Ga0501068_0043383_1225_2070 281
185 3300049585 Ga0501069_0058159 Ga0501069_0058159_1234_2079 281
186 3300049586 Ga0501070_0144308 Ga0501070_0144308_501_1346 281
187 3300049587 Ga0501071_0005157 Ga0501071_0005157_7048_7893 281
188 3300049589 Ga0501073_0040644 Ga0501073_0040644_704_1549 281
189 3300049590 Ga0501074_0003382 Ga0501074_0003382_3168_4013 281
190 3300049591 Ga0501075_0280627 Ga0501075_0280627_392_1237 281
191 3300049592 Ga0501076_0094108 Ga0501076_0094108_1524_2369 281
192 3300049593 Ga0501077_0038900 Ga0501077_0038900_1451_2296 281
193 3300049741 Ga0501079_0005857 Ga0501079_0005857_1339_2184 281
194 3300049742 Ga0501080_0004136 Ga0501080_0004136_11544_12389 281
195 3300049742 Ga0501080_0095321 Ga0501080_0095321_1626_2477 281
196 3300049744 Ga0501083_0022227 Ga0501083_0022227_721_1566 281
197 3300049822 Ga0501035_0128662 Ga0501035_0128662_49_900 281
198 3300049823 Ga0501044_0015753 Ga0501044_0015753_1562_2413 281
199 3300054114 Ga0501084_0008470 Ga0501084_0008470_2923_3768 281
200 3300060353 Ga0501082_0085228 Ga0501082_0085228_433_1278 281
201 3300005295 Ga0065707_10117266 Ga0065707_101172663 282
202 3300005329 Ga0070683_100093720 Ga0070683_1000937204 282
203 3300005436 Ga0070713_100119089 Ga0070713_1001190891 282
204 3300005614 Ga0068856_100037215 Ga0068856_1000372156 282
205 3300006852 Ga0075433_10712389 Ga0075433_107123891 282
206 3300006914 Ga0075436_100009663 Ga0075436_1000096636 282
207 3300009551 Ga0105238_10000084 Ga0105238_1000008416 282
208 3300025924 Ga0207694_10004778 Ga0207694_100047788 282
209 3300031240 Ga0265320_10006897 Ga0265320_100068975 282
210 3300050514 nmdc:mga08x19_55514_c1 nmdc:mga08x19_55514_c1_357_1211 282
211 3300031247 Ga0265340_10059806 Ga0265340_100598063 283
212 3300003323 rootH1_10194800 rootH1_101948002 284

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14361

RsbRD_N

RsbT co-antagonist protein rsbRD N-terminal domain

29

131

0.95

PF01740

STAS

STAS domain

182

288

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jhk-assembly1.cif.gz_A crystal structure of bacillus subtilis rsbs 0.9143 162 277
6qcm-assembly1.cif.gz_d cryo em structure of the listeria stressosome 0.894 164 278
7b0u-assembly1.cif.gz_F stressosome complex from listeria innocua 0.8927 162 278
6jhk-assembly1.cif.gz_A crystal structure of bacillus subtilis rsbs 0.8924 162 277
3zxn-assembly1.cif.gz_A moorella thermoacetica rsbs s58e 0.8869 163 278
ID Description Score Start End Superfamily
af_A0A0N7KGR6_2_88_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8721 203 278 3.30.750.24
af_P53273_654_785_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8607 170 276 3.30.750.24
3if5A02 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8543 161 239 3.30.750.24
af_Q10QI4_508_648_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8408 164 276 3.30.750.24
af_Q7K4I4_467_579_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.84 172 270 3.30.750.24
ID Description Score Start End GO Terms
AF-A0A3D3CY20-F1-model_v4 deleted 0.9682 177 252
AF-A0A3D3CY20-F1-model_v4 deleted 0.9441 177 252
AF-A0A4Q5PZ37-F1-model_v4 deleted 0.9354 7 143
AF-A0A6G2XJT0-F1-model_v4 STAS domain-containing protein 0.9189 160 278
AF-A0A017T942-F1-model_v4 RsbR, positive regulator of sigma-B 0.9184 163 278

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