F322997

General Info

Members Datasets Scaffolds Average Seq Length
212 126 424 420

Family's Representative Sequence

Representative Sequence 3300031344|Ga0265316_10073115|Ga0265316_100731152
Length 487
Sequence MNEPRQGGLSPARRPTKREPRRARSDAPDQLHFQHPYLAFLAEIASYLLAHTALACYSTRMADAKISSRSPWFWIPTLYVAEGMPYALAMSVSLVLYKNLGVSNTDIAFYTSWLYLPWVIKPLWSPVVDLLKTRRQWIWMTQLLLGAGLAGVALTIPTPHFFQLTLAFFWLLAFSSATHDIAADGFYMLAMTEREQAFFSGIRSTFYRVAMICAQGGLVSLAGKFYQRTGDYPTAWLLAFVFAAGFFLCLGLYHGFILPQPPADHPGGIGSSETFFAGFFKTFGTFFQKPKIVVLLLFLLLYRLGEAQLVKMVQLFLLDPREKGGLGLVNEQVGLAYGTIGVIALMLGGLLGGFMVARHGLKFWLWPMLLAIHLPDAVFIWLAYTQPENIFAIGAGVAIEQFGYGFGFTAFMLYMIYIARGEHQTAHYAICTGFMALGMMLPGMWSGWLQEHLGYPHFFIWVLLATIPSFMVARLVPLDSNFGKRTD

Samples

Sample ID Description Type Environment
1 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
11 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
12 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
13 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
14 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
15 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
16 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
17 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
19 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
20 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
21 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
25 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
26 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
27 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
28 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
29 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
33 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
34 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
35 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
36 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
37 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
38 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
39 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
40 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
41 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
42 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
43 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
44 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
45 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
46 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
47 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
50 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
51 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
52 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
53 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
54 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
55 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
56 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
57 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
58 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
59 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
60 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
61 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
62 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
63 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
64 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
65 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
66 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
67 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
70 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
71 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
72 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
73 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
74 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
75 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
76 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
77 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
78 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
81 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
82 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
83 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
84 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
85 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
86 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
87 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
90 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
91 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
92 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
93 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
94 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
95 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
96 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
97 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
98 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
104 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
105 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
108 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
109 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
110 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
111 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
112 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
113 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
114 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
115 2738541297 Duganella sp. GV083 Isolate Unclassified
116 2738541357 Duganella sp. GV053 Isolate Unclassified
117 2738543003 Duganella sp. GV066 Isolate Unclassified
118 2738543026 Duganella sp. GV089 Isolate Unclassified
119 2738543029 Duganella sp. GV039 Isolate Unclassified
120 2821131069 Duganella sp. 1224 Isolate Unclassified
121 2842711865 Duganella sp. R-73148 Isolate Unclassified
122 2857553236 Duganella sp. R-74557 Isolate Unclassified
123 2857558681 Duganella sp. R-74565 Isolate Unclassified
124 2857564685 Duganella sp. R-74599 Isolate Unclassified
125 2904424332 Duganella sp. 1411 Isolate Rhizosphere
126 2919476304 Duganella sp. 3397 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.34
Metatranscriptomes 0
Isolates 5.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.08
Nodule 0.47
Rhizoplane 1.42
Rhizosphere 81.13
Stem 0
Stem Tuber 0
Unclassified 1.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265316_10073115 3300031344 Bacteria 2641
2 JGI25154J39366_1001517 3300002738 Bacteria 8091
3 rootL2_10031758 3300003322 Bacteria 4378
4 rootH1_10092758 3300003323 Bacteria 3219
5 Ga0055529_1000015 3300003763 Bacteria 366950
6 Ga0055526_1000007 3300003771 Bacteria 321998
7 Ga0055526_1000305 3300003771 Bacteria 41039
8 Ga0070689_100058970 3300005340 Unclassified 2982
9 Ga0068856_100008205 3300005614 Bacteria 10185
10 Ga0081455_10059587 3300005937 Bacteria 3222
11 Ga0075363_100044971 3300006048 Bacteria 2341
12 Ga0105244_10001007 3300009036 Bacteria 23567
13 Ga0105244_10003935 3300009036 Bacteria 10426
14 Ga0105238_10042145 3300009551 Bacteria 4622
15 Ga0182006_1000023 3300015261 Bacteria 275031
16 Ga0182007_10018216 3300015262 Bacteria 2547
17 Ga0182005_1000006 3300015265 Bacteria 515188
18 Ga0209646_1000125 3300025246 Bacteria 135847
19 Ga0209455_1000031 3300025272 Bacteria 519952
20 Ga0209025_1013198 3300025294 Bacteria 5214
21 Ga0209564_1000010 3300025295 Bacteria 885399
22 Ga0209564_1000042 3300025295 Bacteria 392805
23 Ga0209758_1000433 3300025297 Bacteria 70750
24 Ga0207655_1000718 3300025728 Bacteria 37593
25 Ga0207655_1011859 3300025728 Bacteria 5146
26 Ga0207694_10071777 3300025924 Bacteria 2706
27 Ga0207702_10004630 3300026078 Bacteria 12184
28 Ga0209281_1002427 3300027111 Bacteria 7507
29 Ga0265337_1000128 3300028556 Bacteria 38151
30 Ga0265337_1008105 3300028556 Bacteria 3857
31 Ga0265326_10021150 3300028558 Bacteria 1866
32 Ga0265319_1000003 3300028563 Bacteria 340561
33 Ga0265318_10020703 3300028577 Bacteria 2651
34 Ga0265323_10000031 3300028653 Bacteria 77683
35 Ga0265323_10005889 3300028653 Bacteria 5183
36 Ga0265336_10001453 3300028666 Bacteria 10803
37 Ga0265338_10000008 3300028800 Bacteria 481542
38 Ga0265338_10000269 3300028800 Bacteria 95081
39 Ga0265338_10000494 3300028800 Bacteria 70344
40 Ga0265338_10000525 3300028800 Bacteria 67650
41 Ga0265338_10000742 3300028800 Bacteria 55600
42 Ga0265338_10003615 3300028800 Bacteria 21574
43 Ga0265338_10012191 3300028800 Bacteria 9818
44 Ga0265338_10034936 3300028800 Bacteria 4844
45 Ga0265338_10043505 3300028800 Bacteria 4164
46 Ga0265338_10044963 3300028800 Bacteria 4068
47 Ga0265338_10048812 3300028800 Bacteria 3846
48 Ga0265338_10146323 3300028800 Bacteria 1842
49 Ga0265324_10000906 3300029957 Bacteria 18776
50 Ga0265324_10008048 3300029957 Bacteria 4224
51 Ga0265324_10017372 3300029957 Bacteria 2617
52 Ga0316177_1198654 3300030731 Bacteria 3227
53 Ga0316182_1339737 3300030745 Bacteria 4060
54 Ga0265320_10000316 3300031240 Bacteria 39398
55 Ga0265320_10007983 3300031240 Bacteria 6517
56 Ga0265320_10020547 3300031240 Bacteria 3575
57 Ga0265320_10028352 3300031240 Bacteria 2908
58 Ga0265340_10038851 3300031247 Bacteria 2352
59 Ga0265331_10005405 3300031250 Bacteria 7721
60 Ga0265316_10003554 3300031344 Bacteria 15719
61 Ga0265316_10024708 3300031344 Bacteria 5026
62 Ga0265316_10050386 3300031344 Bacteria 3274
63 Ga0265313_10002683 3300031595 Bacteria 15077
64 Ga0265313_10011248 3300031595 Bacteria 5576
65 Ga0265314_10024145 3300031711 Bacteria 4616
66 Ga0265342_10010305 3300031712 Bacteria 6501
67 Ga0316576_10050255 3300031727 Bacteria 3032
68 Ga0316576_10074557 3300031727 Bacteria 2509
69 Ga0307518_10009057 3300031838 Bacteria 7108
70 Ga0373953_0021712 3300035117 Bacteria 2413
71 Ga0316574_0013729 3300035398 Bacteria 4664
72 Ga0316584_0148471 3300036712 Bacteria 1746
73 Ga0373925_0019107 3300037068 Bacteria 4983
74 Ga0451577_0010105 3300042876 Bacteria 9043
75 Ga0453684_0000467 3300044712 Bacteria 161003
76 Ga0453684_0049815 3300044712 Bacteria 5517
77 Ga0453684_0136767 3300044712 Bacteria 2932
78 Ga0451576_0011850 3300045051 Bacteria 9867
79 Ga0451576_0097429 3300045051 Bacteria 3058
80 Ga0495617_000020 3300046452 Bacteria 230257
81 Ga0495627_000004 3300046453 Bacteria 640612
82 Ga0495592_0000180 3300046454 Bacteria 55455
83 Ga0495590_0000012 3300046457 Bacteria 303377
84 Ga0495638_0000047 3300046460 Bacteria 216004
85 Ga0495638_0116050 3300046460 Bacteria 1586
86 Ga0495651_0036090 3300046462 Bacteria 3848
87 Ga0495653_0000035 3300046463 Bacteria 129875
88 Ga0495650_0000379 3300046471 Bacteria 77062
89 Ga0495650_0001352 3300046471 Bacteria 24386
90 Ga0495650_0001738 3300046471 Bacteria 19879
91 Ga0495650_0002304 3300046471 Bacteria 15833
92 Ga0495650_0004498 3300046471 Bacteria 9526
93 Ga0495650_0075892 3300046471 Bacteria 1307
94 Ga0495605_0000018 3300046474 Bacteria 270187
95 Ga0495639_0005283 3300046475 Bacteria 5556
96 Ga0495662_0042985 3300046476 Bacteria 2181
97 Ga0495585_0001329 3300046492 Bacteria 19630
98 Ga0495607_0001286 3300046501 Bacteria 22456
99 Ga0495607_0010565 3300046501 Bacteria 6199
100 Ga0495583_0000092 3300046506 Bacteria 158865
101 Ga0495606_0000101 3300046507 Bacteria 146752
102 Ga0495606_0000161 3300046507 Bacteria 117607
103 Ga0495606_0000288 3300046507 Bacteria 87389
104 Ga0495606_0002341 3300046507 Bacteria 22313
105 Ga0495606_0003068 3300046507 Bacteria 18205
106 Ga0495606_0003140 3300046507 Bacteria 17907
107 Ga0495606_0007572 3300046507 Bacteria 9674
108 Ga0495610_0000014 3300046512 Bacteria 444708
109 Ga0495610_0003254 3300046512 Bacteria 12818
110 Ga0495610_0003298 3300046512 Bacteria 12701
111 Ga0495610_0003541 3300046512 Bacteria 12096
112 Ga0495610_0003802 3300046512 Bacteria 11507
113 Ga0495610_0005972 3300046512 Bacteria 8519
114 Ga0495618_0000412 3300046514 Bacteria 30775
115 Ga0495618_0005906 3300046514 Bacteria 7441
116 Ga0495628_0000045 3300046516 Bacteria 98769
117 Ga0495630_0030399 3300046517 Bacteria 4018
118 Ga0495637_0000304 3300046520 Bacteria 38117
119 Ga0495637_0001015 3300046520 Bacteria 17683
120 Ga0495643_0000237 3300046522 Bacteria 82853
121 Ga0495643_0001080 3300046522 Bacteria 27172
122 Ga0495644_0014662 3300046523 Bacteria 3002
123 Ga0495648_0000019 3300046524 Bacteria 276407
124 Ga0495648_0030910 3300046524 Bacteria 3533
125 Ga0495648_0049560 3300046524 Bacteria 2573
126 Ga0495648_0091112 3300046524 Bacteria 1706
127 Ga0495648_0116526 3300046524 Bacteria 1443
128 Ga0495642_0000965 3300046528 Bacteria 13439
129 Ga0495654_0000014 3300046530 Bacteria 312126
130 Ga0495640_0015845 3300046533 Bacteria 5657
131 Ga0495640_0023253 3300046533 Unclassified 4521
132 Ga0495586_0000644 3300046535 Bacteria 20079
133 Ga0495586_0001664 3300046535 Bacteria 12197
134 Ga0495609_0000824 3300046538 Bacteria 23076
135 Ga0495609_0011337 3300046538 Bacteria 4246
136 Ga0495597_0000081 3300046542 Bacteria 84083
137 Ga0495597_0000152 3300046542 Bacteria 61422
138 Ga0495645_0004173 3300046543 Bacteria 9873
139 Ga0495622_0000355 3300046557 Bacteria 32338
140 Ga0495622_0009885 3300046557 Bacteria 4414
141 Ga0495633_0000086 3300046558 Bacteria 124357
142 Ga0495633_0000280 3300046558 Bacteria 58801
143 Ga0495633_0003501 3300046558 Bacteria 10414
144 Ga0495633_0050548 3300046558 Bacteria 1959
145 Ga0495667_0041535 3300046559 Unclassified 3050
146 Ga0495668_0000066 3300046616 Bacteria 178533
147 Ga0495668_0000575 3300046616 Bacteria 44931
148 Ga0495668_0000582 3300046616 Bacteria 44454
149 Ga0495668_0001071 3300046616 Bacteria 28867
150 Ga0495668_0009726 3300046616 Bacteria 5874
151 Ga0495634_0002786 3300046642 Bacteria 14354
152 Ga0495634_0165930 3300046642 Bacteria 1390
153 Ga0495625_0000208 3300046660 Bacteria 93861
154 Ga0495625_0000675 3300046660 Bacteria 48697
155 Ga0495625_0016056 3300046660 Bacteria 5903
156 Ga0495625_0020678 3300046660 Bacteria 5074
157 Ga0495661_0042450 3300046665 Bacteria 2803
158 Ga0495599_0007963 3300046678 Bacteria 6427
159 Ga0495613_0001933 3300046689 Bacteria 15715
160 Ga0495671_0000005 3300046692 Bacteria 509397
161 Ga0495671_0019770 3300046692 Bacteria 3556
162 Ga0495649_0003098 3300046694 Bacteria 11377
163 Ga0495649_0005746 3300046694 Bacteria 7822
164 Ga0495660_0002570 3300046810 Bacteria 11544
165 Ga0495660_0003296 3300046810 Bacteria 10021
166 Ga0495660_0024511 3300046810 Bacteria 3435
167 Ga0495660_0062263 3300046810 Bacteria 2000
168 Ga0495674_0060878 3300047319 Bacteria 3292
169 Ga0495672_0000568 3300047320 Bacteria 41736
170 Ga0495683_0016719 3300047323 Bacteria 3807
171 Ga0495687_000172 3300047443 Bacteria 95963
172 Ga0495687_001391 3300047443 Bacteria 22349
173 Ga0495679_004823 3300047446 Bacteria 6095
174 Ga0495673_0000008 3300047469 Bacteria 752462
175 Ga0495673_0000009 3300047469 Bacteria 731993
176 Ga0495673_0000012 3300047469 Bacteria 656908
177 Ga0495681_0005943 3300047470 Bacteria 8096
178 Ga0495686_0001062 3300047472 Bacteria 32860
179 Ga0495686_0013769 3300047472 Bacteria 5603
180 Ga0495686_0055539 3300047472 Bacteria 2476
181 Ga0496103_0013166 3300048906 Bacteria 4904
182 Ga0496114_0043976 3300048917 Bacteria 3704
183 Ga0496115_0000438 3300048918 Bacteria 33680
184 Ga0496122_0028810 3300048925 Bacteria 4700
185 Ga0496123_0011065 3300048926 Bacteria 7877
186 Ga0496124_0123531 3300048927 Bacteria 2065
187 Ga0496124_0259402 3300048927 Bacteria 1280
188 Ga0496126_0006489 3300048929 Bacteria 13020
189 Ga0495678_000027 3300049459 Bacteria 222075
190 Ga0495678_001512 3300049459 Bacteria 18040
191 Ga0495678_003449 3300049459 Bacteria 9792
192 Ga0501249_002009 3300049679 Bacteria 4137
193 Ga0501080_0199023 3300049742 Bacteria 1839
194 Ga0501269_000489 3300049766 Bacteria 8304
195 nmdc:mga03n38_35590_c1 3300050490 Bacteria 2134
196 Ga0500650_0038819 3300053098 Unclassified 2192
197 Ga0500618_000559 3300053125 Bacteria 23126
198 Ga0500618_027104 3300053125 Bacteria 1364
199 Ga0500586_000339 3300053145 Bacteria 9250
200 Ga0500586_002193 3300053145 Bacteria 4332
201 2738826264 2738541297 Bacteria 6549566
202 2739150061 2738541357 Bacteria 6549408
203 2739191980 2738543003 Bacteria 6549560
204 2739318457 2738543026 Bacteria 6549408
205 2739336698 2738543029 Bacteria 6549249
206 2821134930 2821131069 Bacteria 6108407
207 2842715788 2842711865 Bacteria 7155354
208 2857558158 2857553236 Bacteria 6166726
209 2857558811 2857558681 Bacteria 6617694
210 2857569689 2857564685 Bacteria 6290584
211 2904428303 2904424332 Bacteria 7633521
212 2919476468 2919476304 Bacteria 5888696
213 Ga0265316_10073115
214 JGI25154J39366_1001517
215 rootL2_10031758
216 rootH1_10092758
217 Ga0055529_1000015
218 Ga0055526_1000007
219 Ga0055526_1000305
220 Ga0070689_100058970
221 Ga0068856_100008205
222 Ga0081455_10059587
223 Ga0075363_100044971
224 Ga0105244_10001007
225 Ga0105244_10003935
226 Ga0105238_10042145
227 Ga0182006_1000023
228 Ga0182007_10018216
229 Ga0182005_1000006
230 Ga0209646_1000125
231 Ga0209455_1000031
232 Ga0209025_1013198
233 Ga0209564_1000010
234 Ga0209564_1000042
235 Ga0209758_1000433
236 Ga0207655_1000718
237 Ga0207655_1011859
238 Ga0207694_10071777
239 Ga0207702_10004630
240 Ga0209281_1002427
241 Ga0265337_1000128
242 Ga0265337_1008105
243 Ga0265326_10021150
244 Ga0265319_1000003
245 Ga0265318_10020703
246 Ga0265323_10000031
247 Ga0265323_10005889
248 Ga0265336_10001453
249 Ga0265338_10000008
250 Ga0265338_10000269
251 Ga0265338_10000494
252 Ga0265338_10000525
253 Ga0265338_10000742
254 Ga0265338_10003615
255 Ga0265338_10012191
256 Ga0265338_10034936
257 Ga0265338_10043505
258 Ga0265338_10044963
259 Ga0265338_10048812
260 Ga0265338_10146323
261 Ga0265324_10000906
262 Ga0265324_10008048
263 Ga0265324_10017372
264 Ga0316177_1198654
265 Ga0316182_1339737
266 Ga0265320_10000316
267 Ga0265320_10007983
268 Ga0265320_10020547
269 Ga0265320_10028352
270 Ga0265340_10038851
271 Ga0265331_10005405
272 Ga0265316_10003554
273 Ga0265316_10024708
274 Ga0265316_10050386
275 Ga0265313_10002683
276 Ga0265313_10011248
277 Ga0265314_10024145
278 Ga0265342_10010305
279 Ga0316576_10050255
280 Ga0316576_10074557
281 Ga0307518_10009057
282 Ga0373953_0021712
283 Ga0316574_0013729
284 Ga0316584_0148471
285 Ga0373925_0019107
286 Ga0451577_0010105
287 Ga0453684_0000467
288 Ga0453684_0049815
289 Ga0453684_0136767
290 Ga0451576_0011850
291 Ga0451576_0097429
292 Ga0495617_000020
293 Ga0495627_000004
294 Ga0495592_0000180
295 Ga0495590_0000012
296 Ga0495638_0000047
297 Ga0495638_0116050
298 Ga0495651_0036090
299 Ga0495653_0000035
300 Ga0495650_0000379
301 Ga0495650_0001352
302 Ga0495650_0001738
303 Ga0495650_0002304
304 Ga0495650_0004498
305 Ga0495650_0075892
306 Ga0495605_0000018
307 Ga0495639_0005283
308 Ga0495662_0042985
309 Ga0495585_0001329
310 Ga0495607_0001286
311 Ga0495607_0010565
312 Ga0495583_0000092
313 Ga0495606_0000101
314 Ga0495606_0000161
315 Ga0495606_0000288
316 Ga0495606_0002341
317 Ga0495606_0003068
318 Ga0495606_0003140
319 Ga0495606_0007572
320 Ga0495610_0000014
321 Ga0495610_0003254
322 Ga0495610_0003298
323 Ga0495610_0003541
324 Ga0495610_0003802
325 Ga0495610_0005972
326 Ga0495618_0000412
327 Ga0495618_0005906
328 Ga0495628_0000045
329 Ga0495630_0030399
330 Ga0495637_0000304
331 Ga0495637_0001015
332 Ga0495643_0000237
333 Ga0495643_0001080
334 Ga0495644_0014662
335 Ga0495648_0000019
336 Ga0495648_0030910
337 Ga0495648_0049560
338 Ga0495648_0091112
339 Ga0495648_0116526
340 Ga0495642_0000965
341 Ga0495654_0000014
342 Ga0495640_0015845
343 Ga0495640_0023253
344 Ga0495586_0000644
345 Ga0495586_0001664
346 Ga0495609_0000824
347 Ga0495609_0011337
348 Ga0495597_0000081
349 Ga0495597_0000152
350 Ga0495645_0004173
351 Ga0495622_0000355
352 Ga0495622_0009885
353 Ga0495633_0000086
354 Ga0495633_0000280
355 Ga0495633_0003501
356 Ga0495633_0050548
357 Ga0495667_0041535
358 Ga0495668_0000066
359 Ga0495668_0000575
360 Ga0495668_0000582
361 Ga0495668_0001071
362 Ga0495668_0009726
363 Ga0495634_0002786
364 Ga0495634_0165930
365 Ga0495625_0000208
366 Ga0495625_0000675
367 Ga0495625_0016056
368 Ga0495625_0020678
369 Ga0495661_0042450
370 Ga0495599_0007963
371 Ga0495613_0001933
372 Ga0495671_0000005
373 Ga0495671_0019770
374 Ga0495649_0003098
375 Ga0495649_0005746
376 Ga0495660_0002570
377 Ga0495660_0003296
378 Ga0495660_0024511
379 Ga0495660_0062263
380 Ga0495674_0060878
381 Ga0495672_0000568
382 Ga0495683_0016719
383 Ga0495687_000172
384 Ga0495687_001391
385 Ga0495679_004823
386 Ga0495673_0000008
387 Ga0495673_0000009
388 Ga0495673_0000012
389 Ga0495681_0005943
390 Ga0495686_0001062
391 Ga0495686_0013769
392 Ga0495686_0055539
393 Ga0496103_0013166
394 Ga0496114_0043976
395 Ga0496115_0000438
396 Ga0496122_0028810
397 Ga0496123_0011065
398 Ga0496124_0123531
399 Ga0496124_0259402
400 Ga0496126_0006489
401 Ga0495678_000027
402 Ga0495678_001512
403 Ga0495678_003449
404 Ga0501249_002009
405 Ga0501080_0199023
406 Ga0501269_000489
407 nmdc:mga03n38_35590_c1
408 Ga0500650_0038819
409 Ga0500618_000559
410 Ga0500618_027104
411 Ga0500586_000339
412 Ga0500586_002193
413 2738826264
414 2739150061
415 2739191980
416 2739318457
417 2739336698
418 2821134930
419 2842715788
420 2857558158
421 2857558811
422 2857569689
423 2904428303
424 2919476468

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03092

BT1

BT1 family

80

249

0.83

PF07690

MFS_1

Major Facilitator Superfamily

77

441

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kkk-assembly3.cif.gz_C crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation (h115a mutant) 0.8171 7 409
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.8128 11 410
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.7938 7 409
6kkk-assembly3.cif.gz_C crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation (h115a mutant) 0.7882 7 409
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.7844 11 410
ID Description Score Start End Superfamily
af_P0AE16_220_412_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9588 229 409 1.20.1250.20
af_P0AE16_220_412_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8676 229 409 1.20.1250.20
af_O96186_278_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.854 224 409 1.20.1250.20
af_P0AE16_11_205_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8424 9 204 1.20.1250.20
af_P76628_9_385_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8384 9 409 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A6L5QHD3-F1-model_v4 MFS transporter 0.9933 1 420 GO:0016020
GO:0022857
AF-A0A6L5QHD3-F1-model_v4 MFS transporter 0.9909 1 420 GO:0016020
GO:0022857
AF-A0A1M7MP42-F1-model_v4 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG 0.9903 5 419 GO:0016020
AF-A0A6L3ZRE4-F1-model_v4 deleted 0.9895 212 420
AF-A0A2E4IZD4-F1-model_v4 MFS transporter 0.9862 1 420 GO:0016020
GO:0022857

Map