F323253

General Info

Members Datasets Scaffolds Average Seq Length
212 131 424 287

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0000374|Ga0495625_0000374_46208_47155
Length 315
Sequence MQKITLTIVAVILGIGSLTTGNIDHQLQRSITIDSLGACQGISYQNGRIFLYGDRETGMIREFKMEGDSLVYQHKEIKLTKNGQDVINHPTGIAYNGVAPTFIGNSIRLNAEGTKWRAVIYCVDWKALLSTGTLDASLLNTIDDDACIQGTRPEYVKYNNKWYVATADYGDHGNEVRLYDPQKLAKAANTKEAGVLYKKFTCTPWVQNLHWIADKGVLVLIQNKIEGRQWRFTYVDLKKSIEAGKQVVISQVDDINRADELEGFSFIGNDDRGIAVTSSPKGNVNKLVKTGEMCQLTGAGVHPVAFFINTNLTFK

Samples

Sample ID Description Type Environment
1 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
8 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
14 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
47 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
48 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
49 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
69 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
77 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
78 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
79 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
80 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
81 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
82 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
83 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
86 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
87 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
88 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
89 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
90 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
93 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
96 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
97 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
98 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
101 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
102 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
107 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
108 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
109 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
110 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
111 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
112 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
113 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
114 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
115 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
116 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
117 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
118 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
119 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
120 2738541302 Pedobacter sp. CF074 Isolate Unclassified
121 2818991437 Pedobacter terrae 518 Isolate Unclassified
122 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
123 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
124 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
125 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
126 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
127 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
128 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
129 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
130 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
131 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.4
Metatranscriptomes 0
Isolates 6.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.04
Nodule 0
Rhizoplane 0.47
Rhizosphere 68.87
Stem 0
Stem Tuber 0
Unclassified 5.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495625_0000374 3300046660 Bacteria 68566
2 SwRhRL2b_contig_3070855 2162886007 Bacteria 29472
3 JGI24740J21852_10003618 3300001979 Bacteria 6748
4 JGI24740J21852_10024788 3300001979 Bacteria 2030
5 JGI24739J22299_10006411 3300001989 Bacteria 4443
6 JGI24737J22298_10000138 3300001990 Bacteria 22343
7 JGI24737J22298_10036358 3300001990 Unclassified 1521
8 JGI24735J21928_10000008 3300002067 Bacteria 319819
9 JGI25162J39368_1000062 3300002737 Bacteria 135587
10 JGI25162J39368_1001399 3300002737 Bacteria 13182
11 JGI25154J39366_1000078 3300002738 Bacteria 90241
12 JGI25165J46597_1000741 3300003214 Bacteria 25362
13 rootH1_10067389 3300003316 Bacteria 6430
14 rootH1_10171430 3300003316 Unclassified 1125
15 rootH2_10001521 3300003320 Bacteria 67147
16 rootH2_10008160 3300003320 Bacteria 36645
17 rootH2_10013300 3300003320 Bacteria 29603
18 rootH2_10298286 3300003320 Unclassified 1496
19 rootH1_10000459 3300003323 Bacteria 37280
20 rootH1_10024225 3300003323 Bacteria 1583
21 rootH1_10103076 3300003323 Bacteria 12549
22 rootH1_10157530 3300003323 Bacteria 4748
23 JGI25160J50197_1001449 3300003354 Bacteria 11859
24 Ga0055536_1000038 3300003781 Bacteria 133102
25 Ga0055530_10000250 3300003791 Bacteria 48786
26 Ga0065714_10002907 3300005288 Bacteria 20587
27 Ga0065714_10070780 3300005288 Bacteria 3766
28 Ga0065714_10092763 3300005288 Bacteria 1852
29 Ga0065714_10187646 3300005288 Bacteria 939
30 Ga0065704_10000258 3300005289 Bacteria 102292
31 Ga0070658_10022844 3300005327 Bacteria 5020
32 Ga0070666_10006946 3300005335 Bacteria 6976
33 Ga0068853_100006301 3300005539 Bacteria 9415
34 Ga0068853_100080941 3300005539 Bacteria 2843
35 Ga0070693_100303683 3300005547 Unclassified 1077
36 Ga0070665_100000006 3300005548 Bacteria 718034
37 Ga0068860_100000005 3300005843 Bacteria 472349
38 Ga0081540_1049898 3300005983 Bacteria 2083
39 Ga0075366_10003608 3300006195 Bacteria 8198
40 Ga0075366_10003641 3300006195 Bacteria 8167
41 Ga0105244_10078937 3300009036 Bacteria 1632
42 Ga0105240_10000061 3300009093 Bacteria 218897
43 Ga0105240_10000087 3300009093 Bacteria 187637
44 Ga0105240_10001644 3300009093 Bacteria 37960
45 Ga0105240_10011276 3300009093 Bacteria 12460
46 Ga0105241_10156414 3300009174 Bacteria 1870
47 Ga0105241_10197296 3300009174 Bacteria 1679
48 Ga0105242_10143449 3300009176 Bacteria 2075
49 Ga0105237_10009452 3300009545 Bacteria 10441
50 Ga0105237_10030165 3300009545 Bacteria 5510
51 Ga0105237_10052025 3300009545 Bacteria 4113
52 Ga0105237_10244786 3300009545 Bacteria 1795
53 Ga0105237_10345704 3300009545 Bacteria 1492
54 Ga0105237_10350203 3300009545 Bacteria 1481
55 Ga0105238_10093510 3300009551 Bacteria 2995
56 Ga0105239_10000004 3300010375 Bacteria 532483
57 Ga0105239_10001901 3300010375 Viruses 27265
58 Ga0105239_10016170 3300010375 Viruses 8255
59 Ga0105239_10044321 3300010375 Bacteria 4877
60 Ga0105239_10065421 3300010375 Bacteria 3993
61 Ga0157373_10000123 3300013100 Bacteria 59777
62 Ga0157373_10005043 3300013100 Bacteria 9918
63 Ga0157373_10048107 3300013100 Bacteria 3041
64 Ga0157371_10000657 3300013102 Bacteria 40996
65 Ga0157371_10006559 3300013102 Bacteria 9568
66 Ga0157370_10004535 3300013104 Bacteria 15907
67 Ga0157370_10086021 3300013104 Bacteria 2954
68 Ga0157370_10192793 3300013104 Bacteria 1892
69 Ga0157369_10000007 3300013105 Bacteria 402562
70 Ga0157369_10257645 3300013105 Bacteria 1820
71 Ga0157374_10151153 3300013296 Bacteria 2257
72 Ga0163162_10000035 3300013306 Bacteria 147102
73 Ga0163162_10000274 3300013306 Bacteria 47010
74 Ga0163162_10013274 3300013306 Bacteria 8047
75 Ga0163162_10415753 3300013306 Bacteria 1477
76 Ga0157372_10000648 3300013307 Bacteria 38170
77 Ga0157372_10000873 3300013307 Bacteria 32729
78 Ga0157372_10013887 3300013307 Bacteria 8604
79 Ga0157372_10157732 3300013307 Unclassified 2621
80 Ga0163163_10161132 3300014325 Bacteria 2289
81 Ga0182008_10044521 3300014497 Bacteria 2207
82 Ga0182008_10105037 3300014497 Bacteria 1397
83 Ga0182006_1000220 3300015261 Bacteria 55777
84 Ga0182006_1000233 3300015261 Bacteria 52709
85 Ga0182006_1002077 3300015261 Bacteria 11198
86 Ga0182007_10000007 3300015262 Bacteria 376596
87 Ga0163161_10000130 3300017792 Bacteria 70533
88 Ga0163161_10000518 3300017792 Bacteria 31450
89 Ga0163161_10004104 3300017792 Bacteria 10190
90 Ga0163161_10010086 3300017792 Viruses 6538
91 Ga0163161_10178815 3300017792 Bacteria 1626
92 Ga0207427_100110 3300025231 Bacteria 113735
93 Ga0209437_100093 3300025233 Bacteria 239733
94 Ga0209437_100177 3300025233 Bacteria 135759
95 Ga0209646_1000004 3300025246 Bacteria 786587
96 Ga0209026_1000136 3300025250 Bacteria 116507
97 Ga0209148_1023302 3300025254 Unclassified 987
98 Ga0209233_1000089 3300025261 Bacteria 316381
99 Ga0209233_1000758 3300025261 Bacteria 14596
100 Ga0209676_1000201 3300025292 Bacteria 133195
101 Ga0209758_1026431 3300025297 Bacteria 2511
102 Ga0209050_1000203 3300025298 Bacteria 133156
103 Ga0207426_1000002 3300025302 Bacteria 1249660
104 Ga0207426_1000367 3300025302 Bacteria 80232
105 Ga0207680_10030951 3300025903 Unclassified 3026
106 Ga0207647_10076367 3300025904 Bacteria 2015
107 Ga0207654_10221892 3300025911 Bacteria 1254
108 Ga0207695_10000057 3300025913 Bacteria 376090
109 Ga0207695_10000068 3300025913 Bacteria 324859
110 Ga0207695_10001273 3300025913 Bacteria 42881
111 Ga0207695_10025912 3300025913 Bacteria 6554
112 Ga0207695_10057437 3300025913 Bacteria 4042
113 Ga0207671_10005528 3300025914 Bacteria 11618
114 Ga0207671_10048568 3300025914 Bacteria 3141
115 Ga0207671_10216530 3300025914 Bacteria 1499
116 Ga0207671_10257722 3300025914 Unclassified 1372
117 Ga0207667_10245449 3300025949 Bacteria 1832
118 Ga0207640_10064067 3300025981 Viruses 2446
119 Ga0207639_10077464 3300026041 Bacteria 2621
120 Ga0268266_10000010 3300028379 Bacteria 1030233
121 Ga0268264_10000012 3300028381 Bacteria 521740
122 Ga0307517_10005170 3300028786 Bacteria 19797
123 Ga0307517_10068171 3300028786 Bacteria 3245
124 Ga0307517_10101914 3300028786 Bacteria 2255
125 Ga0307515_10001368 3300028794 Bacteria 55146
126 Ga0307515_10001915 3300028794 Bacteria 46153
127 Ga0265327_10000212 3300031251 Bacteria 121556
128 Ga0307513_10154414 3300031456 Bacteria 2198
129 Ga0307509_10136271 3300031507 Bacteria 2399
130 Ga0307405_10000044 3300031731 Bacteria 77117
131 Ga0307407_10000025 3300031903 Bacteria 112811
132 Ga0307412_10000026 3300031911 Bacteria 228930
133 Ga0307409_100159177 3300031995 Bacteria 1972
134 Ga0307416_100000068 3300032002 Bacteria 86974
135 Ga0307414_10000708 3300032004 Bacteria 17002
136 Ga0307414_10014668 3300032004 Bacteria 4707
137 Ga0307510_10015380 3300033180 Bacteria 9046
138 Ga0439465_0090996 3300041413 Bacteria 1044
139 Ga0466970_0136808 3300044765 Unclassified 1348
140 Ga0466957_0105201 3300044842 Bacteria 1783
141 Ga0495638_0062652 3300046460 Bacteria 2295
142 Ga0495638_0105339 3300046460 Bacteria 1681
143 Ga0495651_0185843 3300046462 Bacteria 1467
144 Ga0495650_0000036 3300046471 Bacteria 400633
145 Ga0495585_0000173 3300046492 Bacteria 69500
146 Ga0495585_0003037 3300046492 Bacteria 11563
147 Ga0495585_0153319 3300046492 Bacteria 1200
148 Ga0495606_0000008 3300046507 Bacteria 321373
149 Ga0495606_0008101 3300046507 Bacteria 9215
150 Ga0495610_0000503 3300046512 Bacteria 39937
151 Ga0495610_0000976 3300046512 Bacteria 26427
152 Ga0495610_0031692 3300046512 Bacteria 2755
153 Ga0495616_0004145 3300046513 Bacteria 9188
154 Ga0495637_0070774 3300046520 Bacteria 1408
155 Ga0495648_0000462 3300046524 Bacteria 43702
156 Ga0495609_0005195 3300046538 Bacteria 6930
157 Ga0495633_0000029 3300046558 Bacteria 200381
158 Ga0495633_0010743 3300046558 Bacteria 4980
159 Ga0495668_0000010 3300046616 Bacteria 487308
160 Ga0495668_0006174 3300046616 Bacteria 7928
161 Ga0495611_0000172 3300046648 Bacteria 46918
162 Ga0495611_0038382 3300046648 Bacteria 2130
163 Ga0495625_0000017 3300046660 Bacteria 299728
164 Ga0495625_0000678 3300046660 Bacteria 48438
165 Ga0495661_0001366 3300046665 Bacteria 20602
166 Ga0495661_0003637 3300046665 Bacteria 11341
167 Ga0495661_0004879 3300046665 Bacteria 9604
168 Ga0495658_0070342 3300046683 Bacteria 2030
169 Ga0495671_0041927 3300046692 Bacteria 2303
170 Ga0495649_0000121 3300046694 Bacteria 68443
171 Ga0495649_0053912 3300046694 Bacteria 2176
172 Ga0495660_0117236 3300046810 Bacteria 1351
173 Ga0495687_000009 3300047443 Bacteria 419317
174 Ga0495686_0000078 3300047472 Bacteria 203927
175 Ga0495686_0002440 3300047472 Bacteria 17557
176 Ga0495686_0082876 3300047472 Unclassified 1957
177 Ga0496126_0003532 3300048929 Bacteria 19661
178 Ga0495682_0057868 3300049460 Bacteria 1403
179 Ga0501033_0340175 3300049570 Bacteria 1052
180 Ga0501047_0005154 3300049581 Bacteria 12263
181 Ga0501225_0000154 3300049705 Bacteria 21140
182 Ga0501044_0213371 3300049823 Bacteria 1884
183 Ga0501044_0481071 3300049823 Bacteria 1145
184 nmdc:mga0k408_1321_c2 3300050493 Bacteria 8098
185 nmdc:mga0k408_20643_c1 3300050493 Bacteria 3693
186 Ga0500578_0000042 3300053086 Bacteria 129410
187 Ga0500578_0027268 3300053086 Bacteria 3667
188 Ga0500646_0097950 3300053090 Bacteria 917
189 Ga0500647_0026612 3300053091 Bacteria 2729
190 Ga0500618_000011 3300053125 Bacteria 198091
191 Ga0500652_014153 3300053131 Bacteria 2845
192 Ga0500568_0074721 3300053139 Bacteria 1293
193 Ga0500588_0010260 3300053146 Unclassified 2256
194 Ga0500604_0006038 3300053151 Unclassified 3197
195 Ga0500616_0090035 3300053153 Bacteria 1522
196 Ga0500622_0000358 3300053156 Bacteria 44392
197 Ga0500622_0021825 3300053156 Bacteria 3397
198 Ga0500636_0045301 3300053177 Bacteria 2595
199 2586210603 2585427687 Bacteria 5544917
200 2599476604 2599185184 Bacteria 6430550
201 2738856413 2738541302 Bacteria 5944758
202 2819546845 2818991437 Bacteria 5805520
203 2842725555 2842722452 Bacteria 6263924
204 2842914699 2842909656 Bacteria 6185908
205 2852624470 2852623160 Bacteria 4376875
206 2884936662 2884933994 Bacteria 4535041
207 2928078552 2928078545 Bacteria 6534839
208 2928151770 2928147474 Bacteria 6512076
209 2929921696 2929921140 Bacteria 8649150
210 2954019419 2954016120 Bacteria 6446024
211 2977234984 2977232053 Bacteria 5485925
212 8003157227 8003151029 Bacteria 8187759
213 Ga0495625_0000374
214 SwRhRL2b_contig_3070855
215 JGI24740J21852_10003618
216 JGI24740J21852_10024788
217 JGI24739J22299_10006411
218 JGI24737J22298_10000138
219 JGI24737J22298_10036358
220 JGI24735J21928_10000008
221 JGI25162J39368_1000062
222 JGI25162J39368_1001399
223 JGI25154J39366_1000078
224 JGI25165J46597_1000741
225 rootH1_10067389
226 rootH1_10171430
227 rootH2_10001521
228 rootH2_10008160
229 rootH2_10013300
230 rootH2_10298286
231 rootH1_10000459
232 rootH1_10024225
233 rootH1_10103076
234 rootH1_10157530
235 JGI25160J50197_1001449
236 Ga0055536_1000038
237 Ga0055530_10000250
238 Ga0065714_10002907
239 Ga0065714_10070780
240 Ga0065714_10092763
241 Ga0065714_10187646
242 Ga0065704_10000258
243 Ga0070658_10022844
244 Ga0070666_10006946
245 Ga0068853_100006301
246 Ga0068853_100080941
247 Ga0070693_100303683
248 Ga0070665_100000006
249 Ga0068860_100000005
250 Ga0081540_1049898
251 Ga0075366_10003608
252 Ga0075366_10003641
253 Ga0105244_10078937
254 Ga0105240_10000061
255 Ga0105240_10000087
256 Ga0105240_10001644
257 Ga0105240_10011276
258 Ga0105241_10156414
259 Ga0105241_10197296
260 Ga0105242_10143449
261 Ga0105237_10009452
262 Ga0105237_10030165
263 Ga0105237_10052025
264 Ga0105237_10244786
265 Ga0105237_10345704
266 Ga0105237_10350203
267 Ga0105238_10093510
268 Ga0105239_10000004
269 Ga0105239_10001901
270 Ga0105239_10016170
271 Ga0105239_10044321
272 Ga0105239_10065421
273 Ga0157373_10000123
274 Ga0157373_10005043
275 Ga0157373_10048107
276 Ga0157371_10000657
277 Ga0157371_10006559
278 Ga0157370_10004535
279 Ga0157370_10086021
280 Ga0157370_10192793
281 Ga0157369_10000007
282 Ga0157369_10257645
283 Ga0157374_10151153
284 Ga0163162_10000035
285 Ga0163162_10000274
286 Ga0163162_10013274
287 Ga0163162_10415753
288 Ga0157372_10000648
289 Ga0157372_10000873
290 Ga0157372_10013887
291 Ga0157372_10157732
292 Ga0163163_10161132
293 Ga0182008_10044521
294 Ga0182008_10105037
295 Ga0182006_1000220
296 Ga0182006_1000233
297 Ga0182006_1002077
298 Ga0182007_10000007
299 Ga0163161_10000130
300 Ga0163161_10000518
301 Ga0163161_10004104
302 Ga0163161_10010086
303 Ga0163161_10178815
304 Ga0207427_100110
305 Ga0209437_100093
306 Ga0209437_100177
307 Ga0209646_1000004
308 Ga0209026_1000136
309 Ga0209148_1023302
310 Ga0209233_1000089
311 Ga0209233_1000758
312 Ga0209676_1000201
313 Ga0209758_1026431
314 Ga0209050_1000203
315 Ga0207426_1000002
316 Ga0207426_1000367
317 Ga0207680_10030951
318 Ga0207647_10076367
319 Ga0207654_10221892
320 Ga0207695_10000057
321 Ga0207695_10000068
322 Ga0207695_10001273
323 Ga0207695_10025912
324 Ga0207695_10057437
325 Ga0207671_10005528
326 Ga0207671_10048568
327 Ga0207671_10216530
328 Ga0207671_10257722
329 Ga0207667_10245449
330 Ga0207640_10064067
331 Ga0207639_10077464
332 Ga0268266_10000010
333 Ga0268264_10000012
334 Ga0307517_10005170
335 Ga0307517_10068171
336 Ga0307517_10101914
337 Ga0307515_10001368
338 Ga0307515_10001915
339 Ga0265327_10000212
340 Ga0307513_10154414
341 Ga0307509_10136271
342 Ga0307405_10000044
343 Ga0307407_10000025
344 Ga0307412_10000026
345 Ga0307409_100159177
346 Ga0307416_100000068
347 Ga0307414_10000708
348 Ga0307414_10014668
349 Ga0307510_10015380
350 Ga0439465_0090996
351 Ga0466970_0136808
352 Ga0466957_0105201
353 Ga0495638_0062652
354 Ga0495638_0105339
355 Ga0495651_0185843
356 Ga0495650_0000036
357 Ga0495585_0000173
358 Ga0495585_0003037
359 Ga0495585_0153319
360 Ga0495606_0000008
361 Ga0495606_0008101
362 Ga0495610_0000503
363 Ga0495610_0000976
364 Ga0495610_0031692
365 Ga0495616_0004145
366 Ga0495637_0070774
367 Ga0495648_0000462
368 Ga0495609_0005195
369 Ga0495633_0000029
370 Ga0495633_0010743
371 Ga0495668_0000010
372 Ga0495668_0006174
373 Ga0495611_0000172
374 Ga0495611_0038382
375 Ga0495625_0000017
376 Ga0495625_0000678
377 Ga0495661_0001366
378 Ga0495661_0003637
379 Ga0495661_0004879
380 Ga0495658_0070342
381 Ga0495671_0041927
382 Ga0495649_0000121
383 Ga0495649_0053912
384 Ga0495660_0117236
385 Ga0495687_000009
386 Ga0495686_0000078
387 Ga0495686_0002440
388 Ga0495686_0082876
389 Ga0496126_0003532
390 Ga0495682_0057868
391 Ga0501033_0340175
392 Ga0501047_0005154
393 Ga0501225_0000154
394 Ga0501044_0213371
395 Ga0501044_0481071
396 nmdc:mga0k408_1321_c2
397 nmdc:mga0k408_20643_c1
398 Ga0500578_0000042
399 Ga0500578_0027268
400 Ga0500646_0097950
401 Ga0500647_0026612
402 Ga0500618_000011
403 Ga0500652_014153
404 Ga0500568_0074721
405 Ga0500588_0010260
406 Ga0500604_0006038
407 Ga0500616_0090035
408 Ga0500622_0000358
409 Ga0500622_0021825
410 Ga0500636_0045301
411 2586210603
412 2599476604
413 2738856413
414 2819546845
415 2842725555
416 2842914699
417 2852624470
418 2884936662
419 2928078552
420 2928151770
421 2929921696
422 2954019419
423 2977234984
424 8003157227

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3n8b-assembly1.cif.gz_B crystal structure of borrelia burgdorferi pur-alpha 0.705 92 123
6r5z-assembly2.cif.gz_E 9-bladed beta-propeller formed by three 3-bladed fragments 0.694 162 275
7mqa-assembly1.cif.gz_LR cryo-em structure of the human ssu processome, state post-a1 0.6182 44 286
8i7r-assembly1.cif.gz_P3 in situ structure of axonemal doublet microtubules in mouse sperm with 48-nm repeat 0.6024 40 274
1l0q-assembly3.cif.gz_C tandem yvtn beta-propeller and pkd domains from an archaeal surface layer protein 0.5866 39 275
ID Description Score Start End Superfamily
af_P42841_71_212_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7813 162 284 2.130.10.10
af_A4HYJ4_23_151_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.7537 162 284 2.40.128.630
af_I1LDJ8_443_572_2.110.10.10 Mainly Beta;4 Propeller;Hemopexin;Hemopexin-like domain 0.7433 202 275 2.110.10.10
af_Q9VT91_700_864_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.742 162 275 2.130.10.10
af_O82266_16_144_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7306 151 261 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A4R0NZF0-F1-model_v4 Uncharacterized protein 0.9917 98 277
AF-A0A3E1NE17-F1-model_v4 Uncharacterized protein 0.987 22 289
AF-A0A563TZW9-F1-model_v4 Uncharacterized protein 0.9775 19 289
AF-A0A4R0NZF0-F1-model_v4 Uncharacterized protein 0.965 98 277
AF-A0A563TZW9-F1-model_v4 Uncharacterized protein 0.9565 19 289

Map