F323461

General Info

Members Datasets Scaffolds Average Seq Length
212 166 424 465

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2671180694|2673819081
Length 506
Sequence TVCQELRRIVGDAWFRDDTETLVSYSYDATPLYQSMPDGVIFPASTEEVAAVMRVCAQHRIPVVTRGAGSNLCAGVVPLHGGLIMVMARMNRLLEIDQDNLTATFQTGLNTKRFHTAVEETGLFYPPDPSSMIICTMGGNIALGAGGLRGLKYGTTKDYVIGLEAVLASGEVLRTGGKLVKDVAGYDLTRLLVGSGGTLAILTEATVKLVPKPAYRRAMIAVFADLPAAARTVSQIIANRITPCTLEFMDQATIEVVEAFAKIGLPVDAQAILAIEQDGDEAQVEKDLQLIETICRREGAIQVKVAETPEEGAKVMEARRSALAALSRLRPTTILEDATVPRSKIADMVLEVQRIAAKHNVRICTFGHAGDGNLHPTAMTDARDAEEIHRVELAFEEIFDVAIRLGGTITGEHGVGHVKAPYLEWKVGASGISLMKRLKHAFDPDGLLNPGKLFAETRKRVVFTSEPGAENEAGGTAGPEQADAPETDSPGAALEDGRDPAAKGGE

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
15 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
16 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
17 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
18 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
19 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
24 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
28 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
29 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
38 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
43 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
44 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
45 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
46 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
47 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
50 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
53 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
54 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
55 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
56 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
57 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
58 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
59 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
60 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
61 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
62 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
63 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
64 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
65 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
66 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
67 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
68 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
69 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
70 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
71 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
72 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
73 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
74 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
76 2671180694 Paenibacillus sp. A3 Isolate Unclassified
77 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
78 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
79 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
80 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
81 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
82 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
83 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
84 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
85 2643221729 Bacillus sp. Root11 Isolate Unclassified
86 2643221730 Bacillus sp. Root131 Isolate Unclassified
87 2643221731 Bacillus sp. Root147 Isolate Unclassified
88 2643221732 Bacillus sp. Root239 Isolate Unclassified
89 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
90 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
91 2684622632 Bacillus cereus 905 Isolate Unclassified
92 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
93 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
94 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
95 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
96 2738541295 Bacillus sp. OK085 Isolate Unclassified
97 2738541358 Bacillus sp. OV752 Isolate Unclassified
98 2738543006 Bacillus sp. OK077 Isolate Unclassified
99 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
100 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
101 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
102 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
103 2818991459 Paenibacillus sp. 597 Isolate Unclassified
104 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
105 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
106 2842682962 Bacillus sp. R-72492 Isolate Unclassified
107 2842882022 Bacillus sp. R-71893 Isolate Unclassified
108 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
109 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
110 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
111 2857472729 Cohnella sp. R-74144 Isolate Unclassified
112 2857581216 Bacillus sp. R-71922 Isolate Unclassified
113 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
114 2860837431 Bacillus sp. WR11 Isolate Unclassified
115 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
116 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
117 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
118 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
119 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
120 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
121 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
122 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
123 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
124 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
125 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
126 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
127 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
128 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
129 2919720352 Priestia megaterium 4340 Isolate Unclassified
130 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
131 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
132 2929004312 Priestia megaterium 1104 Isolate Unclassified
133 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
134 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
135 2938917290 Bacillus sp. CR71 Isolate Unclassified
136 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
137 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
138 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
139 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
140 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
141 2965761152 Bacillus sp. COPE52 Isolate Unclassified
142 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
143 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
144 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
145 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
146 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
147 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
148 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
149 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
150 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
151 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
152 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
153 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
154 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
155 8022653035 Bacillus sp. Rc4 Isolate Unclassified
156 8022792930 Bacillus sp. Xin Isolate Rhizosphere
157 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
158 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
159 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
160 8023444577 Bacillus sp. BH32 Isolate Unclassified
161 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
162 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
163 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
164 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
165 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
166 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 56.13
Metatranscriptomes 0.47
Isolates 43.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.96
Nodule 0.94
Rhizoplane 10.38
Rhizosphere 49.53
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10016264 3300003187 Bacteria 3258
2 JGI25151J46595_10033040 3300003187 Bacteria 1998
3 JGI25151J46595_10033927 3300003187 Bacteria 1958
4 rootH1_10025125 3300003316 Bacteria 10836
5 rootL2_10128372 3300003322 Bacteria 3733
6 Ga0006562J51391_1001586 3300003578 Bacteria 7220
7 Ga0055538_1000393 3300003751 Bacteria 17716
8 Ga0055532_1002700 3300003758 Bacteria 3476
9 Ga0070671_100161351 3300005355 Bacteria 1895
10 Ga0070678_100000264 3300005456 Bacteria 24244
11 Ga0070686_100031090 3300005544 Bacteria 3261
12 Ga0070704_100040517 3300005549 Bacteria 3207
13 Ga0070702_100003400 3300005615 Bacteria 7111
14 Ga0068860_100110214 3300005843 Bacteria 2631
15 Ga0097621_100027188 3300006237 Bacteria 4497
16 Ga0068871_100059699 3300006358 Bacteria 3108
17 Ga0068865_100021973 3300006881 Bacteria 4155
18 Ga0105251_10021405 3300009011 Bacteria 3377
19 Ga0105244_10071092 3300009036 Bacteria 1735
20 Ga0105250_10062836 3300009092 Bacteria 1494
21 Ga0105247_10008333 3300009101 Bacteria 6323
22 Ga0105248_10006685 3300009177 Bacteria 12654
23 Ga0157378_10019880 3300013297 Bacteria 5903
24 Ga0157375_10067103 3300013308 Bacteria 3584
25 Ga0157379_10003771 3300014968 Bacteria 12905
26 Ga0209784_100117 3300025224 Bacteria 85907
27 Ga0209784_101973 3300025224 Bacteria 2308
28 Ga0209566_100095 3300025225 Bacteria 135895
29 Ga0209566_100203 3300025225 Bacteria 61464
30 Ga0209147_100050 3300025229 Bacteria 274639
31 Ga0209147_100827 3300025229 Bacteria 14620
32 Ga0209147_103620 3300025229 Bacteria 2901
33 Ga0209130_1000643 3300025284 Bacteria 32629
34 Ga0209025_1000457 3300025294 Bacteria 79829
35 Ga0209025_1000722 3300025294 Bacteria 56052
36 Ga0209025_1011756 3300025294 Bacteria 5713
37 Ga0209025_1012584 3300025294 Bacteria 5409
38 Ga0209025_1022587 3300025294 Bacteria 3328
39 Ga0209025_1023543 3300025294 Bacteria 3212
40 Ga0207696_1000822 3300025711 Bacteria 19918
41 Ga0207696_1024314 3300025711 Bacteria 1901
42 Ga0207655_1007980 3300025728 Bacteria 6791
43 Ga0207655_1012704 3300025728 Bacteria 4896
44 Ga0207655_1045596 3300025728 Bacteria 1829
45 Ga0207713_1002482 3300025735 Bacteria 13413
46 Ga0207713_1054697 3300025735 Bacteria 1563
47 Ga0207710_10018759 3300025900 Bacteria 2944
48 Ga0207687_10114016 3300025927 Bacteria 2011
49 Ga0207686_10078562 3300025934 Bacteria 2146
50 Ga0207683_10000079 3300026121 Bacteria 76688
51 Ga0265338_10004519 3300028800 Bacteria 18747
52 Ga0237817_10021 3300030083 Bacteria 63280
53 Ga0265320_10012926 3300031240 Bacteria 4826
54 Ga0265327_10032766 3300031251 Bacteria 2905
55 Ga0307408_100093017 3300031548 Bacteria 2280
56 Ga0307416_100046913 3300032002 Bacteria 3415
57 Ga0373925_0013042 3300037068 Bacteria 6017
58 Ga0395899_0112252 3300037312 Bacteria 1958
59 Ga0237819_00938 3300038705 Bacteria 8917
60 Ga0237819_01775 3300038705 Bacteria 5052
61 Ga0451577_0000670 3300042876 Bacteria 53907
62 Ga0451577_0002958 3300042876 Bacteria 19443
63 Ga0451577_0005741 3300042876 Bacteria 12584
64 Ga0466969_0010126 3300044656 Bacteria 5000
65 Ga0453683_0000009 3300044673 Bacteria 491115
66 Ga0453683_0000062 3300044673 Bacteria 179392
67 Ga0453683_0000862 3300044673 Bacteria 29324
68 Ga0453683_0016240 3300044673 Bacteria 4808
69 Ga0453683_0022008 3300044673 Bacteria 4067
70 Ga0453683_0034018 3300044673 Bacteria 3213
71 Ga0453684_0000406 3300044712 Bacteria 177405
72 Ga0453684_0000555 3300044712 Bacteria 140770
73 Ga0453684_0001725 3300044712 Bacteria 58571
74 Ga0453684_0001884 3300044712 Bacteria 54486
75 Ga0453684_0005340 3300044712 Bacteria 25596
76 Ga0453684_0034208 3300044712 Bacteria 7061
77 Ga0453684_0066153 3300044712 Bacteria 4604
78 Ga0453684_0197402 3300044712 Bacteria 2348
79 Ga0453684_0205860 3300044712 Bacteria 2290
80 Ga0453684_0280320 3300044712 Bacteria 1901
81 Ga0466959_0002254 3300045049 Bacteria 12287
82 Ga0451576_0000334 3300045051 Bacteria 113861
83 Ga0451576_0007663 3300045051 Bacteria 12833
84 Ga0451576_0037196 3300045051 Bacteria 5156
85 Ga0451576_0045382 3300045051 Bacteria 4629
86 Ga0451576_0061322 3300045051 Bacteria 3922
87 Ga0451576_0105481 3300045051 Bacteria 2932
88 Ga0451576_0398506 3300045051 Bacteria 1443
89 Ga0495603_0030066 3300046455 Bacteria 3273
90 Ga0496100_0008407 3300048903 Bacteria 5756
91 Ga0496101_0007486 3300048904 Bacteria 7077
92 Ga0496101_0008295 3300048904 Bacteria 6787
93 Ga0496102_0004751 3300048905 Bacteria 11497
94 Ga0496103_0001317 3300048906 Bacteria 16842
95 Ga0496103_0018846 3300048906 Bacteria 4143
96 Ga0496104_0004511 3300048907 Bacteria 12135
97 Ga0496104_0009680 3300048907 Bacteria 8586
98 Ga0496105_0009428 3300048908 Bacteria 7634
99 Ga0496106_0000304 3300048909 Bacteria 34585
100 Ga0496106_0004882 3300048909 Bacteria 9928
101 Ga0496107_0001349 3300048910 Bacteria 15088
102 Ga0496107_0006655 3300048910 Bacteria 7956
103 Ga0496108_0000406 3300048911 Bacteria 35524
104 Ga0496108_0135157 3300048911 Bacteria 2121
105 Ga0496109_0117224 3300048912 Bacteria 2478
106 Ga0496110_0000495 3300048913 Bacteria 26775
107 Ga0496111_0001634 3300048914 Bacteria 12995
108 Ga0496111_0086599 3300048914 Bacteria 2292
109 Ga0496112_0049103 3300048915 Bacteria 4136
110 Ga0496113_0026566 3300048916 Bacteria 4140
111 Ga0496114_0006353 3300048917 Bacteria 9297
112 Ga0496116_0022247 3300048919 Bacteria 4757
113 Ga0496117_0087705 3300048920 Bacteria 2016
114 Ga0496119_0002045 3300048922 Bacteria 22837
115 Ga0496122_0009036 3300048925 Bacteria 10578
116 Ga0496123_0032031 3300048926 Bacteria 3815
117 Ga0496124_0028586 3300048927 Bacteria 4986
118 Ga0496125_0010862 3300048928 Bacteria 9164
119 Ga0501046_0182193 3300049580 Bacteria 1570
120 Ga0501075_0048518 3300049591 Bacteria 3191
121 2673819081 2671180694 Bacteria 7506943
122 2512733434 2512564039 Bacteria 8739048
123 2553393987 2551306519 Bacteria 5465154
124 2556063048 2554235469 Bacteria 3590176
125 2563928490 2563366752 Bacteria 4961801
126 2578931502 2576861599 Bacteria 4217202
127 2587743716 2585428059 Bacteria 8696589
128 2595320205 2593339198 Bacteria 7267884
129 2644424876 2643221676 Bacteria 8119172
130 2644703791 2643221729 Bacteria 6621700
131 2644708483 2643221730 Bacteria 6523787
132 2644717635 2643221731 Bacteria 5623886
133 2644727024 2643221732 Bacteria 5756404
134 2672337302 2671180330 Bacteria 5521719
135 2674418632 2671180844 Bacteria 4164150
136 2685149216 2684622632 Bacteria 5380049
137 2705993260 2703719227 Bacteria 5631989
138 2712199212 2711768088 Bacteria 3195027
139 2717915771 2716884898 Bacteria 3928789
140 2721504598 2718218445 Bacteria 5113413
141 2738816309 2738541295 Bacteria 5730091
142 2739156441 2738541358 Bacteria 5932299
143 2739210053 2738543006 Bacteria 5904091
144 2808867917 2808606364 Bacteria 4465927
145 2809056128 2808606399 Bacteria 4021018
146 2816862275 2816332186 Bacteria 5331395
147 2819579632 2818991443 Bacteria 6598732
148 2819676191 2818991459 Bacteria 8736032
149 2819706723 2818991465 Bacteria 5388835
150 2831905219 2831905167 Bacteria 3319172
151 2842684810 2842682962 Bacteria 5589973
152 2842882890 2842882022 Bacteria 6158489
153 2857460391 2857453340 Bacteria 8090534
154 2857460847 2857460504 Bacteria 5194327
155 2857466135 2857465823 Bacteria 6772595
156 2857472752 2857472729 Bacteria 6568124
157 2857585452 2857581216 Bacteria 5522813
158 2857593765 2857591370 Bacteria 6569758
159 2860840528 2860837431 Bacteria 4202080
160 2864998554 2864997549 Bacteria 5139696
161 2888580033 2888578766 Bacteria 6743310
162 2889051355 2889049205 Bacteria 7524325
163 2889055839 2889049205 Bacteria 7524325
164 2898910166 2898907183 Bacteria 4067722
165 2904117237 2904113452 Bacteria 7796941
166 2904526441 2904524088 Bacteria 5887454
167 2904564343 2904560550 Bacteria 4029838
168 2904755574 2904755435 Bacteria 7986759
169 2907207652 2907202186 Bacteria 6632024
170 2915600078 2915597211 Bacteria 6475886
171 2915609674 2915606848 Bacteria 6032732
172 2919144961 2919143609 Bacteria 6219228
173 2919432508 2919425241 Bacteria 8055701
174 2919520155 2919517244 Bacteria 5858162
175 2919721286 2919720352 Bacteria 5986006
176 2925331675 2925326138 Bacteria 9652120
177 2928094962 2928093941 Bacteria 5965005
178 2929008425 2929004312 Bacteria 5678476
179 2929185253 2929183550 Bacteria 6377511
180 2929207672 2929206907 Bacteria 5918291
181 2938918667 2938917290 Bacteria 5914775
182 2947428035 2947426588 Bacteria 5357194
183 2960320869 2960319331 Bacteria 5502575
184 2960376525 2960375949 Bacteria 5361395
185 2962293734 2962290636 Bacteria 4072939
186 2964378181 2964375228 Bacteria 4909004
187 2965762517 2965761152 Bacteria 5806513
188 2969139732 2969136845 Bacteria 3923176
189 2969772863 2969770375 Bacteria 4271280
190 2971412657 2971410472 Bacteria 8311090
191 2971896106 2971893375 Bacteria 3929648
192 2979084947 2979083700 Bacteria 5894929
193 2980127948 2980125574 Bacteria 5567337
194 2980189408 2980182181 Bacteria 9454109
195 2980495520 2980492589 Bacteria 4072961
196 3001270729 3001267043 Bacteria 4823521
197 3001276354 3001272096 Bacteria 4729684
198 3006971563 3006969106 Bacteria 4739423
199 3006991875 3006988479 Bacteria 4767936
200 8002322438 8002317523 Bacteria 8051857
201 8022654696 8022653035 Bacteria 4035078
202 8022798343 8022792930 Bacteria 5693794
203 8022894922 8022893055 Bacteria 5300455
204 8022919677 8022914991 Bacteria 5584517
205 8022951594 8022948649 Bacteria 5366783
206 8023449507 8023444577 Bacteria 5661597
207 8052176360 8052174270 Bacteria 3881265
208 8054284784 8054280661 Bacteria 4232245
209 8054800907 8054795415 Bacteria 9785225
210 8055633753 8055632911 Bacteria 5283357
211 8056533062 8056533031 Bacteria 8964429
212 8057475038 8057473075 Bacteria 5892720
213 JGI25151J46595_10016264
214 JGI25151J46595_10033040
215 JGI25151J46595_10033927
216 rootH1_10025125
217 rootL2_10128372
218 Ga0006562J51391_1001586
219 Ga0055538_1000393
220 Ga0055532_1002700
221 Ga0070671_100161351
222 Ga0070678_100000264
223 Ga0070686_100031090
224 Ga0070704_100040517
225 Ga0070702_100003400
226 Ga0068860_100110214
227 Ga0097621_100027188
228 Ga0068871_100059699
229 Ga0068865_100021973
230 Ga0105251_10021405
231 Ga0105244_10071092
232 Ga0105250_10062836
233 Ga0105247_10008333
234 Ga0105248_10006685
235 Ga0157378_10019880
236 Ga0157375_10067103
237 Ga0157379_10003771
238 Ga0209784_100117
239 Ga0209784_101973
240 Ga0209566_100095
241 Ga0209566_100203
242 Ga0209147_100050
243 Ga0209147_100827
244 Ga0209147_103620
245 Ga0209130_1000643
246 Ga0209025_1000457
247 Ga0209025_1000722
248 Ga0209025_1011756
249 Ga0209025_1012584
250 Ga0209025_1022587
251 Ga0209025_1023543
252 Ga0207696_1000822
253 Ga0207696_1024314
254 Ga0207655_1007980
255 Ga0207655_1012704
256 Ga0207655_1045596
257 Ga0207713_1002482
258 Ga0207713_1054697
259 Ga0207710_10018759
260 Ga0207687_10114016
261 Ga0207686_10078562
262 Ga0207683_10000079
263 Ga0265338_10004519
264 Ga0237817_10021
265 Ga0265320_10012926
266 Ga0265327_10032766
267 Ga0307408_100093017
268 Ga0307416_100046913
269 Ga0373925_0013042
270 Ga0395899_0112252
271 Ga0237819_00938
272 Ga0237819_01775
273 Ga0451577_0000670
274 Ga0451577_0002958
275 Ga0451577_0005741
276 Ga0466969_0010126
277 Ga0453683_0000009
278 Ga0453683_0000062
279 Ga0453683_0000862
280 Ga0453683_0016240
281 Ga0453683_0022008
282 Ga0453683_0034018
283 Ga0453684_0000406
284 Ga0453684_0000555
285 Ga0453684_0001725
286 Ga0453684_0001884
287 Ga0453684_0005340
288 Ga0453684_0034208
289 Ga0453684_0066153
290 Ga0453684_0197402
291 Ga0453684_0205860
292 Ga0453684_0280320
293 Ga0466959_0002254
294 Ga0451576_0000334
295 Ga0451576_0007663
296 Ga0451576_0037196
297 Ga0451576_0045382
298 Ga0451576_0061322
299 Ga0451576_0105481
300 Ga0451576_0398506
301 Ga0495603_0030066
302 Ga0496100_0008407
303 Ga0496101_0007486
304 Ga0496101_0008295
305 Ga0496102_0004751
306 Ga0496103_0001317
307 Ga0496103_0018846
308 Ga0496104_0004511
309 Ga0496104_0009680
310 Ga0496105_0009428
311 Ga0496106_0000304
312 Ga0496106_0004882
313 Ga0496107_0001349
314 Ga0496107_0006655
315 Ga0496108_0000406
316 Ga0496108_0135157
317 Ga0496109_0117224
318 Ga0496110_0000495
319 Ga0496111_0001634
320 Ga0496111_0086599
321 Ga0496112_0049103
322 Ga0496113_0026566
323 Ga0496114_0006353
324 Ga0496116_0022247
325 Ga0496117_0087705
326 Ga0496119_0002045
327 Ga0496122_0009036
328 Ga0496123_0032031
329 Ga0496124_0028586
330 Ga0496125_0010862
331 Ga0501046_0182193
332 Ga0501075_0048518
333 2673819081
334 2512733434
335 2553393987
336 2556063048
337 2563928490
338 2578931502
339 2587743716
340 2595320205
341 2644424876
342 2644703791
343 2644708483
344 2644717635
345 2644727024
346 2672337302
347 2674418632
348 2685149216
349 2705993260
350 2712199212
351 2717915771
352 2721504598
353 2738816309
354 2739156441
355 2739210053
356 2808867917
357 2809056128
358 2816862275
359 2819579632
360 2819676191
361 2819706723
362 2831905219
363 2842684810
364 2842882890
365 2857460391
366 2857460847
367 2857466135
368 2857472752
369 2857585452
370 2857593765
371 2860840528
372 2864998554
373 2888580033
374 2889051355
375 2889055839
376 2898910166
377 2904117237
378 2904526441
379 2904564343
380 2904755574
381 2907207652
382 2915600078
383 2915609674
384 2919144961
385 2919432508
386 2919520155
387 2919721286
388 2925331675
389 2928094962
390 2929008425
391 2929185253
392 2929207672
393 2938918667
394 2947428035
395 2960320869
396 2960376525
397 2962293734
398 2964378181
399 2965762517
400 2969139732
401 2969772863
402 2971412657
403 2971896106
404 2979084947
405 2980127948
406 2980189408
407 2980495520
408 3001270729
409 3001276354
410 3006971563
411 3006991875
412 8002322438
413 8022654696
414 8022798343
415 8022894922
416 8022919677
417 8022951594
418 8023449507
419 8052176360
420 8054284784
421 8054800907
422 8055633753
423 8056533062
424 8057475038

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02913

FAD-oxidase_C

FAD linked oxidases, C-terminal domain

212

453

0.99

PF01565

FAD_binding_4

FAD binding domain

37

176

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jdp-assembly1.cif.gz_A crystal structure of h405a mldhd in complex with d-2-hydroxyisovaleric acid 0.9595 2 457
8jdv-assembly1.cif.gz_A crystal structure of mldhd in complex with 2-ketohexanoic acid 0.9584 2 457
8jdo-assembly1.cif.gz_A crystal structure of h405a mldhd in complex with d-2-hydroxyhexanoic acid 0.9574 2 457
8jdp-assembly1.cif.gz_A crystal structure of h405a mldhd in complex with d-2-hydroxyisovaleric acid 0.9574 2 457
8jde-assembly1.cif.gz_A crystal structure of mldhd in complex with d-lactate 0.957 2 457
ID Description Score Start End Superfamily
af_Q11061_332_414_3.30.70.2740 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9752 335 416 3.30.70.2740
af_P0AEP9_231_349_3.30.70.2190 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9745 216 334 3.30.70.2190
af_P0AEP9_110_230_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9742 94 215 3.30.465.10
3pm9F02 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.971 94 215 3.30.465.10
af_P0AEP9_231_349_3.30.70.2190 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9666 216 334 3.30.70.2190
ID Description Score Start End GO Terms
AF-A0A7V4SYN5-F1-model_v4 FAD-binding protein 0.9892 127 456 GO:0003824
GO:0071949
AF-A0A1M3C5X2-F1-model_v4 deleted 0.9859 151 457
AF-A0A212M1E2-F1-model_v4 Glycolate oxidase subunit GlcD 0.9844 1 460 GO:0003824
GO:0071949
AF-A0A831YAV4-F1-model_v4 FAD-binding protein 0.9842 52 456 GO:0003824
GO:0071949
AF-A0A382Q514-F1-model_v4 FAD-binding oxidoreductase/transferase type 4 C-terminal domain-containing protein 0.9821 184 457 GO:0003824
GO:0050660

Map