F323477
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 212 | 169 | 178 | 482 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2855730933|2855734659 |
| Length | 529 |
| Sequence | VLLWTDAALFLIVLAVLAYIWHVRRTPTLRGTWARVSHDGPAMCAAVILAVFAVIGLLDSVHYRSRLPPLPGAAIDAPAAYAPAAQSLLDSLLRGTVLTQPEKTYSAPLRAHQFTKETLLVDGKPVRDFPRLRAGGAHLQDPATERVPDVLRRGGLGLLAGAAVALAGGLLLAAALARTHGGWRQAARDVLHGHTEVRWRAMWITFAGLALVAGALGGWATGYHALGTDRTGNDVLWQALKSIRTALVIGSLTTLAMLPPAIVFGIAAGYFKGKVDDAIQYLYTTLTSIPGVLLVAACVLMMQVYIDNNPTLFDTSAARADLRLFMLCMILGLTGWAGLCRLLRAEALKLRELEFVQAARAFGVSDWSIMRRHLLPNVMHIVLITVVLEFSGLVLYEAVLSYLGIGVDPSMNSFGSMINGARLEMSMDPMIYWNLGTAFAFMLALVLAANLFADAVRAAFDPRTRRFRPRRRPLSAAALVGAPTGGVFAVSPVTAEARETTRDADNDARASGSSGPRGDTPDDARDEPK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2510065053 | Pseudomonas sp. MOIL14HWK12:I1 | Isolate | Rhizosphere |
| 2 | 2510065055 | Pseudomonas sp. MOIL14HWK12:I2 | Isolate | Rhizosphere |
| 3 | 2510065058 | Pseudomonas oleovorans MOIL14HWK12 | Isolate | Rhizosphere |
| 4 | 2585428058 | Methylibium sp. CF468 | Isolate | Rhizosphere |
| 5 | 2585428062 | Methylibium sp. CF059 | Isolate | Rhizosphere |
| 6 | 2588253510 | Rhizobacter sp. OV335 | Isolate | Rhizosphere |
| 7 | 2599185292 | Achromobacter sp. NFACC18-2 | Isolate | Rhizoplane |
| 8 | 2643221569 | Achromobacter sp. Root565 | Isolate | Unclassified |
| 9 | 2643221592 | Rhizobacter sp. Root16D2 | Isolate | Unclassified |
| 10 | 2643221594 | Achromobacter sp. Root170 | Isolate | Unclassified |
| 11 | 2643221621 | Achromobacter sp. Root83 | Isolate | Unclassified |
| 12 | 2643221625 | Rhizobacter sp. Root29 | Isolate | Unclassified |
| 13 | 2643221648 | Rhizobacter sp. Root1238 | Isolate | Unclassified |
| 14 | 2739367655 | Pusillimonas sp. YR330 | Isolate | Unclassified |
| 15 | 2773857672 | Pseudomonas sp. 1766 | Isolate | Unclassified |
| 16 | 2808606395 | Achromobacter sp. SLBN-14 | Isolate | Unclassified |
| 17 | 2855730933 | Achromobacter sp. HZ28 | Isolate | Nodule |
| 18 | 2855767633 | Achromobacter sp. HZ34 | Isolate | Nodule |
| 19 | 2857537821 | Achromobacter sp. R-71975 | Isolate | Unclassified |
| 20 | 2857542790 | Achromobacter sp. R-72367 | Isolate | Unclassified |
| 21 | 2857576091 | Pigmentiphaga sp. R-72090 | Isolate | Unclassified |
| 22 | 2858950400 | Achromobacter sp. K91 | Isolate | Unclassified |
| 23 | 2881412998 | Achromobacter aloeverae AVA-1 | Isolate | Unclassified |
| 24 | 2881927736 | Candidimonas sp. SYP-B2681 | Isolate | Rhizosphere |
| 25 | 2887375801 | Parapusillimonas sp. SGNA-6 | Isolate | Rhizosphere |
| 26 | 2895511927 | Pseudoxanthomonas sp. SGD-5-1 | Isolate | Rhizosphere |
| 27 | 2917832318 | Pseudomonas rhizoryzae RY24 | Isolate | Unclassified |
| 28 | 2919125081 | Pseudomonas psychrotolerans 1545 | Isolate | Rhizosphere |
| 29 | 2941479691 | |||
| 30 | 2974298342 | Pseudomonas sp. SORGH_AS 211 | Isolate | Unclassified |
| 31 | 2984499530 | Pseudomonas sp. SORGH_AS199 | Isolate | Aerial Root |
| 32 | 2984504281 | Pseudomonas psychrotolerans SORGH_AS201 | Isolate | Aerial Root |
| 33 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 34 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 35 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 36 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 37 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 38 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 39 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 40 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 41 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 42 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 45 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 46 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 47 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 48 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 49 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 50 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 51 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 52 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 53 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 54 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 55 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 56 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 57 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 58 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 59 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 60 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 62 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 63 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 64 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 65 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 66 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 68 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 69 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 70 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 71 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 72 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 73 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 74 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 75 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 76 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 77 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 78 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 79 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 80 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 81 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 82 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 83 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 84 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 85 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 86 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 87 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 88 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 89 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 90 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 105 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 107 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 108 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 109 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 110 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 111 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 112 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 113 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 114 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 115 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 116 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 117 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 118 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 119 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 120 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 121 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 122 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 123 | 3300041459 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG | Metagenome | Rhizoplane |
| 124 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 125 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 126 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 127 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 128 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 129 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 130 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 131 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 139 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 140 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 141 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 142 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 143 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 144 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 145 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 146 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 147 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 148 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 149 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 150 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 151 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 152 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 153 | 3300049649 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought | Metagenome | Rhizosphere |
| 154 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 155 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 156 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 157 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 158 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 159 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 160 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 161 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 162 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 163 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 164 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 165 | 3300053154 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere | Metagenome | Endosphere |
| 166 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 167 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 168 | 8002392321 | Alcaligenes faecalis Mc250 | Isolate | Rhizosphere |
| 169 | 8048746797 | Alcaligenes endophyticus DSM 100498 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 83.96 |
| Metatranscriptomes | 0 |
| Isolates | 16.04 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.94 |
| Bulb | 0 |
| Endosphere | 19.34 |
| Nodule | 0.94 |
| Rhizoplane | 2.36 |
| Rhizosphere | 55.66 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 20.75 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25156J39149_1000114 | 3300002705 | Bacteria | 57756 |
| 2 | JGI25154J39366_1000675 | 3300002738 | Bacteria | 15804 |
| 3 | JGI25157J39369_1000015 | 3300002741 | Bacteria | 194042 |
| 4 | JGI25151J46595_10000197 | 3300003187 | Bacteria | 74387 |
| 5 | Ga0055539_1000535 | 3300003752 | Bacteria | 11519 |
| 6 | Ga0055539_1002579 | 3300003752 | Bacteria | 2715 |
| 7 | Ga0055533_1000010 | 3300003756 | Bacteria | 491196 |
| 8 | Ga0055525_1001110 | 3300003759 | Bacteria | 6631 |
| 9 | Ga0055535_1000272 | 3300003761 | Bacteria | 54297 |
| 10 | Ga0055529_1000303 | 3300003763 | Bacteria | 56663 |
| 11 | Ga0055529_1000432 | 3300003763 | Bacteria | 42394 |
| 12 | Ga0070658_10035122 | 3300005327 | Bacteria | 4036 |
| 13 | Ga0070658_10040483 | 3300005327 | Bacteria | 3759 |
| 14 | Ga0070670_100022403 | 3300005331 | Bacteria | 5437 |
| 15 | Ga0070660_100059351 | 3300005339 | Bacteria | 2966 |
| 16 | Ga0070669_100041086 | 3300005353 | Bacteria | 3363 |
| 17 | Ga0070675_100003628 | 3300005354 | Bacteria | 11734 |
| 18 | Ga0070673_100014871 | 3300005364 | Bacteria | 5445 |
| 19 | Ga0070663_100011045 | 3300005455 | Bacteria | 5653 |
| 20 | Ga0070678_100018081 | 3300005456 | Bacteria | 4560 |
| 21 | Ga0068867_100000068 | 3300005459 | Bacteria | 62945 |
| 22 | Ga0070706_100058479 | 3300005467 | Bacteria | 3558 |
| 23 | Ga0070672_100032600 | 3300005543 | Bacteria | 3934 |
| 24 | Ga0068855_100047847 | 3300005563 | Bacteria | 5051 |
| 25 | Ga0068855_100084123 | 3300005563 | Bacteria | 3684 |
| 26 | Ga0068855_100293829 | 3300005563 | Bacteria | 1801 |
| 27 | Ga0068857_100002227 | 3300005577 | Bacteria | 15795 |
| 28 | Ga0068854_100000903 | 3300005578 | Bacteria | 17876 |
| 29 | Ga0068856_100001705 | 3300005614 | Bacteria | 22970 |
| 30 | Ga0068864_100095861 | 3300005618 | Bacteria | 2625 |
| 31 | Ga0068863_100107922 | 3300005841 | Bacteria | 2649 |
| 32 | Ga0075364_10001973 | 3300006051 | Bacteria | 11426 |
| 33 | Ga0075364_10002022 | 3300006051 | Bacteria | 11309 |
| 34 | Ga0075364_10005106 | 3300006051 | Bacteria | 7609 |
| 35 | Ga0075364_10005177 | 3300006051 | Bacteria | 7564 |
| 36 | Ga0097621_100027873 | 3300006237 | Bacteria | 4447 |
| 37 | Ga0075370_10024896 | 3300006353 | Bacteria | 3309 |
| 38 | Ga0075370_10031502 | 3300006353 | Bacteria | 2961 |
| 39 | Ga0068865_100040324 | 3300006881 | Bacteria | 3172 |
| 40 | Ga0105251_10044163 | 3300009011 | Bacteria | 2154 |
| 41 | Ga0105244_10014461 | 3300009036 | Bacteria | 4562 |
| 42 | Ga0105240_10016146 | 3300009093 | Bacteria | 10120 |
| 43 | Ga0105240_10260238 | 3300009093 | Bacteria | 2002 |
| 44 | Ga0105240_10309052 | 3300009093 | Bacteria | 1806 |
| 45 | Ga0114129_10208886 | 3300009147 | Bacteria | 2640 |
| 46 | Ga0105243_10027356 | 3300009148 | Bacteria | 4369 |
| 47 | Ga0105237_10065985 | 3300009545 | Bacteria | 3614 |
| 48 | Ga0105239_10007802 | 3300010375 | Bacteria | 12244 |
| 49 | Ga0157373_10127184 | 3300013100 | Bacteria | 1792 |
| 50 | Ga0157371_10000986 | 3300013102 | Bacteria | 31519 |
| 51 | Ga0157371_10057047 | 3300013102 | Bacteria | 2769 |
| 52 | Ga0157369_10020594 | 3300013105 | Bacteria | 7374 |
| 53 | Ga0157369_10065226 | 3300013105 | Bacteria | 3920 |
| 54 | Ga0157372_10303989 | 3300013307 | Bacteria | 1856 |
| 55 | Ga0157377_10000082 | 3300014745 | Bacteria | 74078 |
| 56 | Ga0157376_10031115 | 3300014969 | Bacteria | 4269 |
| 57 | Ga0163161_10015819 | 3300017792 | Bacteria | 5261 |
| 58 | Ga0209674_100003 | 3300025226 | Bacteria | 2196646 |
| 59 | Ga0209563_100010 | 3300025230 | Bacteria | 1337457 |
| 60 | Ga0207427_100468 | 3300025231 | Bacteria | 22112 |
| 61 | Ga0209258_100163 | 3300025242 | Bacteria | 149677 |
| 62 | Ga0209258_101625 | 3300025242 | Bacteria | 7297 |
| 63 | Ga0209646_1000226 | 3300025246 | Bacteria | 60008 |
| 64 | Ga0209026_1000021 | 3300025250 | Bacteria | 375165 |
| 65 | Ga0209677_100093 | 3300025253 | Bacteria | 101695 |
| 66 | Ga0209677_100699 | 3300025253 | Bacteria | 17140 |
| 67 | Ga0209677_100817 | 3300025253 | Bacteria | 15553 |
| 68 | Ga0209759_1000025 | 3300025256 | Bacteria | 317082 |
| 69 | Ga0209759_1001158 | 3300025256 | Bacteria | 16724 |
| 70 | Ga0209759_1001380 | 3300025256 | Bacteria | 13987 |
| 71 | Ga0209455_1000059 | 3300025272 | Bacteria | 339995 |
| 72 | Ga0209455_1004631 | 3300025272 | Bacteria | 4441 |
| 73 | Ga0209676_1002708 | 3300025292 | Bacteria | 11953 |
| 74 | Ga0209025_1000003 | 3300025294 | Bacteria | 1366495 |
| 75 | Ga0209050_1002086 | 3300025298 | Bacteria | 18312 |
| 76 | Ga0209051_1003653 | 3300025303 | Bacteria | 9965 |
| 77 | Ga0209051_1011122 | 3300025303 | Bacteria | 4471 |
| 78 | Ga0207705_10011934 | 3300025909 | Bacteria | 6277 |
| 79 | Ga0207705_10109656 | 3300025909 | Bacteria | 2038 |
| 80 | Ga0207684_10046620 | 3300025910 | Bacteria | 3677 |
| 81 | Ga0207695_10030302 | 3300025913 | Bacteria | 5958 |
| 82 | Ga0207695_10164884 | 3300025913 | Bacteria | 2145 |
| 83 | Ga0207681_10009335 | 3300025923 | Bacteria | 5994 |
| 84 | Ga0207694_10216698 | 3300025924 | Bacteria | 1560 |
| 85 | Ga0207650_10004133 | 3300025925 | Bacteria | 9920 |
| 86 | Ga0207659_10007985 | 3300025926 | Bacteria | 6541 |
| 87 | Ga0207709_10000935 | 3300025935 | Bacteria | 21921 |
| 88 | Ga0207709_10063785 | 3300025935 | Bacteria | 2310 |
| 89 | Ga0207709_10065906 | 3300025935 | Bacteria | 2279 |
| 90 | Ga0207704_10023822 | 3300025938 | Bacteria | 3307 |
| 91 | Ga0207704_10103100 | 3300025938 | Bacteria | 1907 |
| 92 | Ga0207691_10035972 | 3300025940 | Bacteria | 4590 |
| 93 | Ga0207691_10036590 | 3300025940 | Bacteria | 4549 |
| 94 | Ga0207667_10223846 | 3300025949 | Bacteria | 1927 |
| 95 | Ga0207640_10002002 | 3300025981 | Bacteria | 10998 |
| 96 | Ga0207678_10000695 | 3300026067 | Bacteria | 30735 |
| 97 | Ga0207702_10000777 | 3300026078 | Bacteria | 33801 |
| 98 | Ga0207641_10086830 | 3300026088 | Bacteria | 2729 |
| 99 | Ga0207648_10000942 | 3300026089 | Bacteria | 32855 |
| 100 | Ga0207648_10038077 | 3300026089 | Bacteria | 4233 |
| 101 | Ga0207648_10112668 | 3300026089 | Bacteria | 2388 |
| 102 | Ga0207676_10034847 | 3300026095 | Bacteria | 3814 |
| 103 | Ga0207675_100054695 | 3300026118 | Bacteria | 3724 |
| 104 | Ga0207683_10016204 | 3300026121 | Bacteria | 6343 |
| 105 | Ga0209974_10003140 | 3300027876 | Bacteria | 5979 |
| 106 | Ga0265336_10000051 | 3300028666 | Bacteria | 114796 |
| 107 | Ga0307515_10000416 | 3300028794 | Bacteria | 102535 |
| 108 | Ga0307515_10004048 | 3300028794 | Bacteria | 30591 |
| 109 | Ga0265324_10000292 | 3300029957 | Bacteria | 37241 |
| 110 | Ga0268256_1013106 | 3300030500 | Bacteria | 2530 |
| 111 | Ga0307512_10020792 | 3300030522 | Bacteria | 5931 |
| 112 | Ga0307513_10031648 | 3300031456 | Bacteria | 5987 |
| 113 | Ga0307516_10001369 | 3300031730 | Bacteria | 33766 |
| 114 | Ga0307516_10028838 | 3300031730 | Bacteria | 5613 |
| 115 | Ga0307507_10047578 | 3300033179 | Bacteria | 4186 |
| 116 | Ga0373931_0008613 | 3300035691 | Bacteria | 4846 |
| 117 | Ga0395900_0035953 | 3300037418 | Bacteria | 5104 |
| 118 | Ga0395905_0046816 | 3300037471 | Bacteria | 4055 |
| 119 | Ga0395905_0116645 | 3300037471 | Bacteria | 2509 |
| 120 | Ga0395905_0148390 | 3300037471 | Bacteria | 2206 |
| 121 | Ga0395901_0001733 | 3300038443 | Bacteria | 22534 |
| 122 | Ga0436361_0055301 | 3300039447 | Bacteria | 3447 |
| 123 | Ga0436361_0558969 | 3300039447 | Bacteria | 5001 |
| 124 | Ga0451800_0206135 | 3300041459 | Bacteria | 2978 |
| 125 | Ga0451577_0001870 | 3300042876 | Bacteria | 26817 |
| 126 | Ga0451577_0008072 | 3300042876 | Bacteria | 10270 |
| 127 | Ga0466969_0001138 | 3300044656 | Bacteria | 14320 |
| 128 | Ga0466965_0005645 | 3300044683 | Bacteria | 5647 |
| 129 | Ga0466966_0005078 | 3300044684 | Bacteria | 8646 |
| 130 | Ga0466961_0063392 | 3300044693 | Bacteria | 2348 |
| 131 | Ga0466964_0001961 | 3300044706 | Bacteria | 7214 |
| 132 | Ga0466959_0011665 | 3300045049 | Bacteria | 6320 |
| 133 | Ga0495585_0005083 | 3300046492 | Bacteria | 8383 |
| 134 | Ga0495607_0000146 | 3300046501 | Bacteria | 74540 |
| 135 | Ga0495583_0000284 | 3300046506 | Bacteria | 81053 |
| 136 | Ga0495610_0004260 | 3300046512 | Bacteria | 10651 |
| 137 | Ga0495632_0031922 | 3300046519 | Bacteria | 2718 |
| 138 | Ga0495625_0001624 | 3300046660 | Bacteria | 26504 |
| 139 | Ga0495686_0005328 | 3300047472 | Bacteria | 10189 |
| 140 | Ga0495686_0081050 | 3300047472 | Bacteria | 1982 |
| 141 | Ga0496102_0014271 | 3300048905 | Bacteria | 6903 |
| 142 | Ga0496105_0108146 | 3300048908 | Bacteria | 2296 |
| 143 | Ga0496109_0038078 | 3300048912 | Bacteria | 4347 |
| 144 | Ga0496116_0004631 | 3300048919 | Bacteria | 13029 |
| 145 | Ga0496116_0043360 | 3300048919 | Bacteria | 3065 |
| 146 | Ga0496117_0001655 | 3300048920 | Bacteria | 31271 |
| 147 | Ga0496118_0010913 | 3300048921 | Bacteria | 8934 |
| 148 | Ga0496121_0000324 | 3300048924 | Bacteria | 100083 |
| 149 | Ga0496122_0000029 | 3300048925 | Bacteria | 336396 |
| 150 | Ga0496122_0035879 | 3300048925 | Bacteria | 4023 |
| 151 | Ga0496123_0000427 | 3300048926 | Bacteria | 75952 |
| 152 | Ga0496124_0000024 | 3300048927 | Bacteria | 414291 |
| 153 | Ga0496125_0000478 | 3300048928 | Bacteria | 70888 |
| 154 | Ga0496125_0093005 | 3300048928 | Bacteria | 2252 |
| 155 | Ga0501043_0000013 | 3300049579 | Bacteria | 185639 |
| 156 | Ga0501046_0000125 | 3300049580 | Bacteria | 81656 |
| 157 | Ga0501047_0000040 | 3300049581 | Bacteria | 185677 |
| 158 | Ga0501048_0000139 | 3300049582 | Bacteria | 43845 |
| 159 | Ga0501198_000020 | 3300049649 | Bacteria | 75919 |
| 160 | Ga0501222_000025 | 3300049662 | Bacteria | 64191 |
| 161 | Ga0501222_002197 | 3300049662 | Bacteria | 2709 |
| 162 | Ga0501035_0064378 | 3300049822 | Bacteria | 3259 |
| 163 | Ga0501044_0000102 | 3300049823 | Bacteria | 106408 |
| 164 | Ga0501045_0043476 | 3300049824 | Bacteria | 3271 |
| 165 | nmdc:mga00v17_32338_c1 | 3300050491 | Bacteria | 3092 |
| 166 | nmdc:mga00v17_4095_c1 | 3300050491 | Bacteria | 7544 |
| 167 | nmdc:mga00v17_4255_c1 | 3300050491 | Bacteria | 7431 |
| 168 | nmdc:mga00v17_46098_c1 | 3300050491 | Bacteria | 2636 |
| 169 | nmdc:mga07m45_32745_c1 | 3300050496 | Bacteria | 2883 |
| 170 | nmdc:mga07m45_4808_c1 | 3300050496 | Bacteria | 6643 |
| 171 | nmdc:mga05p37_223200_c1 | 3300050507 | Bacteria | 2273 |
| 172 | Ga0500635_0000248 | 3300053080 | Bacteria | 23504 |
| 173 | Ga0500644_0022030 | 3300053088 | Bacteria | 1917 |
| 174 | Ga0500593_000398 | 3300053117 | Bacteria | 17346 |
| 175 | Ga0500559_0018508 | 3300053136 | Bacteria | 2943 |
| 176 | Ga0500619_000008 | 3300053154 | Bacteria | 70273 |
| 177 | Ga0500634_0024009 | 3300053161 | Bacteria | 3316 |
| 178 | Ga0466962_0007362 | 3300061719 | Bacteria | 5282 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300027876 | Ga0209974_10003140 | Ga0209974_100031403 | 436 |
| 2 | 3300028794 | Ga0307515_10004048 | Ga0307515_1000404812 | 441 |
| 3 | 3300030522 | Ga0307512_10020792 | Ga0307512_100207925 | 441 |
| 4 | 3300046512 | Ga0495610_0004260 | Ga0495610_0004260_5245_6684 | 441 |
| 5 | 3300006353 | Ga0075370_10031502 | Ga0075370_100315022 | 443 |
| 6 | 3300050496 | nmdc:mga07m45_32745_c1 | nmdc:mga07m45_32745_c1_170_1624 | 443 |
| 7 | 3300053088 | Ga0500644_0022030 | Ga0500644_0022030_361_1800 | 443 |
| 8 | 3300046660 | Ga0495625_0001624 | Ga0495625_0001624_17506_18945 | 444 |
| 9 | 3300053161 | Ga0500634_0024009 | Ga0500634_0024009_1333_2796 | 444 |
| 10 | 3300006051 | Ga0075364_10005106 | Ga0075364_100051062 | 445 |
| 11 | 3300037471 | Ga0395905_0148390 | Ga0395905_0148390_676_2094 | 449 |
| 12 | 3300048905 | Ga0496102_0014271 | Ga0496102_0014271_1160_2608 | 451 |
| 13 | 3300026089 | Ga0207648_10112668 | Ga0207648_101126682 | 453 |
| 14 | 3300046519 | Ga0495632_0031922 | Ga0495632_0031922_1224_2663 | 455 |
| 15 | 3300049662 | Ga0501222_002197 | Ga0501222_002197_188_1633 | 456 |
| 16 | 3300006051 | Ga0075364_10005177 | Ga0075364_100051772 | 457 |
| 17 | 3300050491 | nmdc:mga00v17_4255_c1 | nmdc:mga00v17_4255_c1_5441_6904 | 457 |
| 18 | 3300041459 | Ga0451800_0206135 | Ga0451800_0206135_1239_2678 | 459 |
| 19 | 3300028794 | Ga0307515_10000416 | Ga0307515_1000041667 | 460 |
| 20 | 3300042876 | Ga0451577_0008072 | Ga0451577_0008072_6936_8384 | 460 |
| 21 | 3300049649 | Ga0501198_000020 | Ga0501198_000020_27506_28954 | 460 |
| 22 | 3300049662 | Ga0501222_000025 | Ga0501222_000025_46809_48257 | 460 |
| 23 | 3300048908 | Ga0496105_0108146 | Ga0496105_0108146_165_1652 | 461 |
| 24 | 3300031456 | Ga0307513_10031648 | Ga0307513_100316483 | 464 |
| 25 | 3300033179 | Ga0307507_10047578 | Ga0307507_100475783 | 464 |
| 26 | 3300025303 | Ga0209051_1011122 | Ga0209051_10111223 | 465 |
| 27 | 3300039447 | Ga0436361_0558969 | Ga0436361_0558969_16_1413 | 465 |
| 28 | 3300006051 | Ga0075364_10002022 | Ga0075364_100020224 | 466 |
| 29 | 3300013100 | Ga0157373_10127184 | Ga0157373_101271841 | 466 |
| 30 | 3300013102 | Ga0157371_10000986 | Ga0157371_1000098620 | 466 |
| 31 | 3300025256 | Ga0209759_1001158 | Ga0209759_100115812 | 466 |
| 32 | 3300050491 | nmdc:mga00v17_32338_c1 | nmdc:mga00v17_32338_c1_598_2097 | 466 |
| 33 | 3300005459 | Ga0068867_100000068 | Ga0068867_10000006847 | 467 |
| 34 | 3300009148 | Ga0105243_10027356 | Ga0105243_100273563 | 467 |
| 35 | 3300014745 | Ga0157377_10000082 | Ga0157377_1000008257 | 467 |
| 36 | 3300025935 | Ga0207709_10000935 | Ga0207709_1000093519 | 467 |
| 37 | 3300026089 | Ga0207648_10000942 | Ga0207648_1000094226 | 467 |
| 38 | 3300042876 | Ga0451577_0001870 | Ga0451577_0001870_19026_20471 | 468 |
| 39 | 3300009036 | Ga0105244_10014461 | Ga0105244_100144612 | 470 |
| 40 | 3300013102 | Ga0157371_10057047 | Ga0157371_100570472 | 470 |
| 41 | 3300013105 | Ga0157369_10020594 | Ga0157369_100205942 | 471 |
| 42 | 3300030500 | Ga0268256_1013106 | Ga0268256_10131062 | 471 |
| 43 | 3300038443 | Ga0395901_0001733 | Ga0395901_0001733_15220_16689 | 471 |
| 44 | 3300046492 | Ga0495585_0005083 | Ga0495585_0005083_2843_4291 | 471 |
| 45 | iso_pu_bacteria | 2739367655 | 2739612161 | 471 |
| 46 | iso_pu_bacteria | 2858950400 | 2858953459 | 471 |
| 47 | iso_pu_bacteria | 2881927736 | 2881929410 | 471 |
| 48 | 3300025292 | Ga0209676_1002708 | Ga0209676_100270810 | 472 |
| 49 | 3300025298 | Ga0209050_1002086 | Ga0209050_10020865 | 472 |
| 50 | 3300028666 | Ga0265336_10000051 | Ga0265336_1000005143 | 472 |
| 51 | 3300029957 | Ga0265324_10000292 | Ga0265324_1000029213 | 472 |
| 52 | 3300031730 | Ga0307516_10028838 | Ga0307516_100288383 | 472 |
| 53 | 3300053136 | Ga0500559_0018508 | Ga0500559_0018508_431_1900 | 473 |
| 54 | iso_pu_bacteria | 2510065053 | 2510281526 | 474 |
| 55 | iso_pu_bacteria | 2510065055 | 2510292304 | 474 |
| 56 | iso_pu_bacteria | 2510065058 | 2510309674 | 474 |
| 57 | iso_pu_bacteria | 2773857672 | 2774130322 | 474 |
| 58 | iso_pu_bacteria | 2917832318 | 2917832336 | 474 |
| 59 | iso_pu_bacteria | 2919125081 | 2919125147 | 474 |
| 60 | iso_pu_bacteria | 2974298342 | 2974300694 | 474 |
| 61 | iso_pu_bacteria | 2984499530 | 2984503075 | 474 |
| 62 | iso_pu_bacteria | 2984504281 | 2984508356 | 474 |
| 63 | 3300003187 | JGI25151J46595_10000197 | JGI25151J46595_1000019743 | 475 |
| 64 | 3300003752 | Ga0055539_1000535 | Ga0055539_10005359 | 475 |
| 65 | 3300003756 | Ga0055533_1000010 | Ga0055533_1000010127 | 475 |
| 66 | 3300003759 | Ga0055525_1001110 | Ga0055525_10011106 | 475 |
| 67 | 3300003761 | Ga0055535_1000272 | Ga0055535_100027225 | 475 |
| 68 | 3300003763 | Ga0055529_1000303 | Ga0055529_100030327 | 475 |
| 69 | 3300005364 | Ga0070673_100014871 | Ga0070673_1000148712 | 475 |
| 70 | 3300025226 | Ga0209674_100003 | Ga0209674_1000031463 | 475 |
| 71 | 3300025230 | Ga0209563_100010 | Ga0209563_1000101190 | 475 |
| 72 | 3300025242 | Ga0209258_100163 | Ga0209258_10016393 | 475 |
| 73 | 3300025253 | Ga0209677_100093 | Ga0209677_10009363 | 475 |
| 74 | 3300025256 | Ga0209759_1001380 | Ga0209759_100138011 | 475 |
| 75 | 3300025272 | Ga0209455_1000059 | Ga0209455_1000059200 | 475 |
| 76 | 3300025294 | Ga0209025_1000003 | Ga0209025_1000003277 | 475 |
| 77 | iso_pu_bacteria | 2585428062 | 2587754668 | 475 |
| 78 | iso_pu_bacteria | 2857542790 | 2857545159 | 475 |
| 79 | 3300003763 | Ga0055529_1000432 | Ga0055529_100043220 | 476 |
| 80 | 3300025272 | Ga0209455_1004631 | Ga0209455_10046313 | 476 |
| 81 | 3300049823 | Ga0501044_0000102 | Ga0501044_0000102_58527_59984 | 476 |
| 82 | 3300053117 | Ga0500593_000398 | Ga0500593_000398_5545_6981 | 476 |
| 83 | iso_pu_bacteria | 2857576091 | 2857578577 | 476 |
| 84 | iso_pu_bacteria | 2895511927 | 2895516040 | 476 |
| 85 | iso_pu_bacteria | 8048746797 | 8048748947 | 476 |
| 86 | 3300053154 | Ga0500619_000008 | Ga0500619_000008_55457_56893 | 477 |
| 87 | iso_pu_bacteria | 2585428058 | 2587736948 | 477 |
| 88 | iso_pu_bacteria | 2588253510 | 2588295494 | 477 |
| 89 | iso_pu_bacteria | 2599185292 | 2599905796 | 477 |
| 90 | iso_pu_bacteria | 2643221569 | 2643860691 | 477 |
| 91 | iso_pu_bacteria | 2643221592 | 2643971933 | 477 |
| 92 | iso_pu_bacteria | 2643221594 | 2643981462 | 477 |
| 93 | iso_pu_bacteria | 2643221621 | 2644119563 | 477 |
| 94 | iso_pu_bacteria | 2643221625 | 2644139427 | 477 |
| 95 | iso_pu_bacteria | 2643221648 | 2644275037 | 477 |
| 96 | iso_pu_bacteria | 2808606395 | 2809035369 | 477 |
| 97 | iso_pu_bacteria | 2857537821 | 2857541086 | 477 |
| 98 | iso_pu_bacteria | 2941479691 | 2941483524 | 477 |
| 99 | iso_pu_bacteria | 8002392321 | 8002393340 | 477 |
| 100 | 3300006051 | Ga0075364_10001973 | Ga0075364_100019736 | 478 |
| 101 | 3300009011 | Ga0105251_10044163 | Ga0105251_100441632 | 478 |
| 102 | 3300013307 | Ga0157372_10303989 | Ga0157372_103039892 | 478 |
| 103 | 3300037471 | Ga0395905_0046816 | Ga0395905_0046816_1146_2588 | 478 |
| 104 | 3300046506 | Ga0495583_0000284 | Ga0495583_0000284_69975_71432 | 478 |
| 105 | 3300050491 | nmdc:mga00v17_4095_c1 | nmdc:mga00v17_4095_c1_3477_4937 | 478 |
| 106 | 3300005455 | Ga0070663_100011045 | Ga0070663_1000110454 | 479 |
| 107 | 3300006353 | Ga0075370_10024896 | Ga0075370_100248962 | 479 |
| 108 | 3300017792 | Ga0163161_10015819 | Ga0163161_100158192 | 479 |
| 109 | 3300025935 | Ga0207709_10063785 | Ga0207709_100637852 | 479 |
| 110 | 3300025938 | Ga0207704_10103100 | Ga0207704_101031001 | 479 |
| 111 | 3300025940 | Ga0207691_10036590 | Ga0207691_100365902 | 479 |
| 112 | 3300026067 | Ga0207678_10000695 | Ga0207678_1000069521 | 479 |
| 113 | 3300037471 | Ga0395905_0116645 | Ga0395905_0116645_682_2127 | 479 |
| 114 | 3300048927 | Ga0496124_0000024 | Ga0496124_0000024_179480_180961 | 479 |
| 115 | 3300050491 | nmdc:mga00v17_46098_c1 | nmdc:mga00v17_46098_c1_176_1657 | 479 |
| 116 | 3300050496 | nmdc:mga07m45_4808_c1 | nmdc:mga07m45_4808_c1_2915_4360 | 479 |
| 117 | 3300005467 | Ga0070706_100058479 | Ga0070706_1000584791 | 480 |
| 118 | 3300025910 | Ga0207684_10046620 | Ga0207684_100466202 | 480 |
| 119 | 3300025935 | Ga0207709_10065906 | Ga0207709_100659062 | 480 |
| 120 | 3300039447 | Ga0436361_0055301 | Ga0436361_0055301_466_1911 | 480 |
| 121 | 3300048920 | Ga0496117_0001655 | Ga0496117_0001655_19932_21440 | 480 |
| 122 | 3300048928 | Ga0496125_0093005 | Ga0496125_0093005_329_1837 | 480 |
| 123 | 3300049822 | Ga0501035_0064378 | Ga0501035_0064378_1218_2663 | 480 |
| 124 | iso_pu_bacteria | 2887375801 | 2887380289 | 480 |
| 125 | 3300025303 | Ga0209051_1003653 | Ga0209051_10036533 | 481 |
| 126 | 3300037418 | Ga0395900_0035953 | Ga0395900_0035953_2040_3494 | 481 |
| 127 | 3300047472 | Ga0495686_0005328 | Ga0495686_0005328_2314_3762 | 481 |
| 128 | 3300048919 | Ga0496116_0004631 | Ga0496116_0004631_6256_7779 | 481 |
| 129 | 3300048919 | Ga0496116_0043360 | Ga0496116_0043360_1248_2762 | 481 |
| 130 | 3300048921 | Ga0496118_0010913 | Ga0496118_0010913_6476_7990 | 481 |
| 131 | 3300048924 | Ga0496121_0000324 | Ga0496121_0000324_16497_18011 | 481 |
| 132 | 3300048925 | Ga0496122_0000029 | Ga0496122_0000029_144961_146484 | 481 |
| 133 | 3300048925 | Ga0496122_0035879 | Ga0496122_0035879_2309_3823 | 481 |
| 134 | 3300048926 | Ga0496123_0000427 | Ga0496123_0000427_41796_43319 | 481 |
| 135 | 3300048928 | Ga0496125_0000478 | Ga0496125_0000478_58341_59855 | 481 |
| 136 | 3300035691 | Ga0373931_0008613 | Ga0373931_0008613_959_2413 | 482 |
| 137 | 3300046501 | Ga0495607_0000146 | Ga0495607_0000146_24331_25806 | 482 |
| 138 | 3300005563 | Ga0068855_100084123 | Ga0068855_1000841232 | 483 |
| 139 | 3300009147 | Ga0114129_10208886 | Ga0114129_102088862 | 483 |
| 140 | 3300025949 | Ga0207667_10223846 | Ga0207667_102238462 | 483 |
| 141 | 3300048912 | Ga0496109_0038078 | Ga0496109_0038078_2282_3736 | 483 |
| 142 | 3300050507 | nmdc:mga05p37_223200_c1 | nmdc:mga05p37_223200_c1_143_1600 | 483 |
| 143 | iso_pu_bacteria | 2855730933 | 2855734659 | 483 |
| 144 | iso_pu_bacteria | 2855767633 | 2855770249 | 483 |
| 145 | iso_pu_bacteria | 2881412998 | 2881414470 | 483 |
| 146 | 3300005327 | Ga0070658_10035122 | Ga0070658_100351223 | 484 |
| 147 | 3300005327 | Ga0070658_10040483 | Ga0070658_100404832 | 484 |
| 148 | 3300005563 | Ga0068855_100293829 | Ga0068855_1002938292 | 484 |
| 149 | 3300009093 | Ga0105240_10260238 | Ga0105240_102602382 | 484 |
| 150 | 3300009093 | Ga0105240_10309052 | Ga0105240_103090522 | 484 |
| 151 | 3300025231 | Ga0207427_100468 | Ga0207427_10046820 | 484 |
| 152 | 3300025909 | Ga0207705_10109656 | Ga0207705_101096562 | 484 |
| 153 | 3300025913 | Ga0207695_10164884 | Ga0207695_101648842 | 484 |
| 154 | 3300031730 | Ga0307516_10001369 | Ga0307516_100013694 | 484 |
| 155 | 3300047472 | Ga0495686_0081050 | Ga0495686_0081050_461_1918 | 484 |
| 156 | 3300049579 | Ga0501043_0000013 | Ga0501043_0000013_127416_128879 | 484 |
| 157 | 3300049580 | Ga0501046_0000125 | Ga0501046_0000125_23514_24977 | 484 |
| 158 | 3300049581 | Ga0501047_0000040 | Ga0501047_0000040_127416_128879 | 484 |
| 159 | 3300049582 | Ga0501048_0000139 | Ga0501048_0000139_24031_25494 | 484 |
| 160 | 3300049824 | Ga0501045_0043476 | Ga0501045_0043476_1445_2908 | 484 |
| 161 | 3300005331 | Ga0070670_100022403 | Ga0070670_1000224033 | 486 |
| 162 | 3300005353 | Ga0070669_100041086 | Ga0070669_1000410862 | 486 |
| 163 | 3300005354 | Ga0070675_100003628 | Ga0070675_1000036282 | 486 |
| 164 | 3300005456 | Ga0070678_100018081 | Ga0070678_1000180812 | 486 |
| 165 | 3300005543 | Ga0070672_100032600 | Ga0070672_1000326002 | 486 |
| 166 | 3300005618 | Ga0068864_100095861 | Ga0068864_1000958612 | 486 |
| 167 | 3300005841 | Ga0068863_100107922 | Ga0068863_1001079222 | 486 |
| 168 | 3300006237 | Ga0097621_100027873 | Ga0097621_1000278733 | 486 |
| 169 | 3300006881 | Ga0068865_100040324 | Ga0068865_1000403242 | 486 |
| 170 | 3300014969 | Ga0157376_10031115 | Ga0157376_100311153 | 486 |
| 171 | 3300025923 | Ga0207681_10009335 | Ga0207681_100093353 | 486 |
| 172 | 3300025925 | Ga0207650_10004133 | Ga0207650_100041332 | 486 |
| 173 | 3300025926 | Ga0207659_10007985 | Ga0207659_100079852 | 486 |
| 174 | 3300025938 | Ga0207704_10023822 | Ga0207704_100238222 | 486 |
| 175 | 3300025940 | Ga0207691_10035972 | Ga0207691_100359723 | 486 |
| 176 | 3300026088 | Ga0207641_10086830 | Ga0207641_100868302 | 486 |
| 177 | 3300026089 | Ga0207648_10038077 | Ga0207648_100380771 | 486 |
| 178 | 3300026095 | Ga0207676_10034847 | Ga0207676_100348472 | 486 |
| 179 | 3300026121 | Ga0207683_10016204 | Ga0207683_100162042 | 486 |
| 180 | 3300025253 | Ga0209677_100699 | Ga0209677_10069910 | 487 |
| 181 | 3300053080 | Ga0500635_0000248 | Ga0500635_0000248_8507_9973 | 487 |
| 182 | 3300002705 | JGI25156J39149_1000114 | JGI25156J39149_100011413 | 488 |
| 183 | 3300002738 | JGI25154J39366_1000675 | JGI25154J39366_10006758 | 488 |
| 184 | 3300002741 | JGI25157J39369_1000015 | JGI25157J39369_1000015151 | 488 |
| 185 | 3300003752 | Ga0055539_1002579 | Ga0055539_10025792 | 488 |
| 186 | 3300005339 | Ga0070660_100059351 | Ga0070660_1000593512 | 488 |
| 187 | 3300005563 | Ga0068855_100047847 | Ga0068855_1000478473 | 488 |
| 188 | 3300005577 | Ga0068857_100002227 | Ga0068857_10000222712 | 488 |
| 189 | 3300005578 | Ga0068854_100000903 | Ga0068854_10000090316 | 488 |
| 190 | 3300005614 | Ga0068856_100001705 | Ga0068856_10000170514 | 488 |
| 191 | 3300009093 | Ga0105240_10016146 | Ga0105240_100161466 | 488 |
| 192 | 3300009545 | Ga0105237_10065985 | Ga0105237_100659853 | 488 |
| 193 | 3300010375 | Ga0105239_10007802 | Ga0105239_100078024 | 488 |
| 194 | 3300013105 | Ga0157369_10065226 | Ga0157369_100652262 | 488 |
| 195 | 3300025242 | Ga0209258_101625 | Ga0209258_1016253 | 488 |
| 196 | 3300025246 | Ga0209646_1000226 | Ga0209646_100022645 | 488 |
| 197 | 3300025250 | Ga0209026_1000021 | Ga0209026_1000021152 | 488 |
| 198 | 3300025253 | Ga0209677_100817 | Ga0209677_1008172 | 488 |
| 199 | 3300025256 | Ga0209759_1000025 | Ga0209759_1000025152 | 488 |
| 200 | 3300025909 | Ga0207705_10011934 | Ga0207705_100119343 | 488 |
| 201 | 3300025913 | Ga0207695_10030302 | Ga0207695_100303023 | 488 |
| 202 | 3300025924 | Ga0207694_10216698 | Ga0207694_102166981 | 488 |
| 203 | 3300025981 | Ga0207640_10002002 | Ga0207640_100020023 | 488 |
| 204 | 3300026078 | Ga0207702_10000777 | Ga0207702_100007772 | 488 |
| 205 | 3300026118 | Ga0207675_100054695 | Ga0207675_1000546953 | 488 |
| 206 | 3300044656 | Ga0466969_0001138 | Ga0466969_0001138_4656_6125 | 488 |
| 207 | 3300044683 | Ga0466965_0005645 | Ga0466965_0005645_2923_4392 | 488 |
| 208 | 3300044684 | Ga0466966_0005078 | Ga0466966_0005078_2395_3864 | 488 |
| 209 | 3300044693 | Ga0466961_0063392 | Ga0466961_0063392_719_2188 | 488 |
| 210 | 3300044706 | Ga0466964_0001961 | Ga0466964_0001961_1164_2633 | 488 |
| 211 | 3300045049 | Ga0466959_0011665 | Ga0466959_0011665_3608_5077 | 488 |
| 212 | 3300061719 | Ga0466962_0007362 | Ga0466962_0007362_3713_5182 | 488 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
PF00528
BPD_transp_1
Binding-protein-dependent transport system inner membrane component
261
466
0.88
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3tuz-assembly2.cif.gz_F | inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form | 0.669 | 238 | 463 |
| 3tuz-assembly2.cif.gz_F | inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form | 0.6441 | 238 | 463 |
| 2r6g-assembly1.cif.gz_G | the crystal structure of the e. coli maltose transporter | 0.6414 | 249 | 457 |
| 4jbw-assembly2.cif.gz_I | crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc | 0.5851 | 232 | 452 |
| 4ymu-assembly1.cif.gz_C | crystal structure of an amino acid abc transporter complex with arginines and atps | 0.58 | 238 | 457 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FZQ8_74_286_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.787 | 239 | 461 | 1.10.3720.10 |
| af_Q2FZQ8_74_286_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.7771 | 239 | 461 | 1.10.3720.10 |
| af_P33915_131_335_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.7533 | 237 | 462 | 1.10.3720.10 |
| af_Q2FVE9_63_269_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.7509 | 236 | 462 | 1.10.3720.10 |
| af_Q2FZR6_145_349_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.7507 | 237 | 461 | 1.10.3720.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V9E0S9-F1-model_v4 | ABC transporter permease subunit | 0.9476 | 1 | 368 |
GO:0005886
GO:0055085 |
| AF-A0A523Q544-F1-model_v4 | Peptide ABC transporter ATP-binding protein | 0.9369 | 1 | 432 |
GO:0005524
GO:0005886 GO:0015833 GO:0016887 GO:0055085 |
| AF-A0A7V9E0S9-F1-model_v4 | ABC transporter permease subunit | 0.9352 | 1 | 368 |
GO:0005886
GO:0055085 |
| AF-A0A2N2SZU9-F1-model_v4 | Peptide ABC transporter permease | 0.9306 | 2 | 336 |
GO:0005886
|
| AF-A0A3B1A4D3-F1-model_v4 | ABC transporter, permease protein 2 (Cluster 5, nickel/peptides/opines) | 0.9277 | 1 | 467 |
GO:0005886
GO:0055085 |
Predicted Structure (AlphaFold2)
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